ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl07d11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_392469.2| PREDICTED: Apis mellifera similar to CG5735-PB, isoform B (LOC408940), mRNA Length = 2130 Score = 48.1 bits (24), Expect = 0.004 Identities = 24/24 (100%) Strand = Plus / Minus Query: 26 ccgcggccgctgccgcggccgctg 49 |||||||||||||||||||||||| Sbjct: 823 ccgcggccgctgccgcggccgctg 800
>ref|XM_479387.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4350 Score = 46.1 bits (23), Expect = 0.015 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||||||||||||| Sbjct: 50 gccgcggccgctgccgcggccgc 28
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.015 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||||||||||||| Sbjct: 27502595 gccgcggccgctgccgcggccgc 27502573 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 25864830 gccgcggccgccgccgcggccgc 25864808
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 46.1 bits (23), Expect = 0.015 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||||||||||||| Sbjct: 66566 gccgcggccgctgccgcggccgc 66544
>dbj|AK121027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050D20, full insert sequence Length = 5081 Score = 46.1 bits (23), Expect = 0.015 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||||||||||||| Sbjct: 305 gccgcggccgctgccgcggccgc 283
>ref|XM_482974.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1891 Score = 44.1 bits (22), Expect = 0.058 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggccgc 47 |||||||||||||| ||||||||||| Sbjct: 602 gcggccgcggccgccgccgcggccgc 577
>ref|XM_598665.2| PREDICTED: Bos taurus similar to Homeobox protein Hox-D13 (Hox-4.8) (LOC520424), mRNA Length = 975 Score = 44.1 bits (22), Expect = 0.058 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggccgc 47 |||||||||||||||||||| ||||| Sbjct: 152 gcggccgcggccgctgccgccgccgc 127
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 44.1 bits (22), Expect = 0.058 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccgc 47 ||||| |||||||||||||||||||| Sbjct: 20186 gcggctgcggccgctgccgcggccgc 20211 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ccgcggccgctgccgcggcc 45 |||||||||||||||||||| Sbjct: 63572 ccgcggccgctgccgcggcc 63591
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 44.1 bits (22), Expect = 0.058 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccgc 47 |||||||||||||| ||||||||||| Sbjct: 1177016 gcggccgcggccgccgccgcggccgc 1177041 Score = 42.1 bits (21), Expect = 0.23 Identities = 27/29 (93%) Strand = Plus / Minus Query: 21 tgcggccgcggccgctgccgcggccgctg 49 |||||||||||| || ||||||||||||| Sbjct: 1177042 tgcggccgcggcggcggccgcggccgctg 1177014
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.058 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccgc 47 |||||||||||||| ||||||||||| Sbjct: 23657539 gcggccgcggccgccgccgcggccgc 23657564 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 gccgctgccgcggccgctg 49 ||||||||||||||||||| Sbjct: 22100169 gccgctgccgcggccgctg 22100151
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 44.1 bits (22), Expect = 0.058 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccgc 47 |||||||||||||| ||||||||||| Sbjct: 65135 gcggccgcggccgccgccgcggccgc 65160
>gb|AF083097.1|AF083097 Monodelphis domestica transcription factor HOXA13 (HOXA13) gene, partial cds Length = 640 Score = 44.1 bits (22), Expect = 0.058 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggccgc 47 |||||||| ||||||||||||||||| Sbjct: 74 gcggccgctgccgctgccgcggccgc 49
>dbj|AK109528.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C04, full insert sequence Length = 1891 Score = 44.1 bits (22), Expect = 0.058 Identities = 25/26 (96%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggccgc 47 |||||||||||||| ||||||||||| Sbjct: 602 gcggccgcggccgccgccgcggccgc 577
>ref|NM_211316.1| Eremothecium gossypii AFR414Wp (AFR414W), mRNA Length = 819 Score = 44.1 bits (22), Expect = 0.058 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccgc 47 |||||||||||||| ||||||||||| Sbjct: 175 gcggccgcggccgccgccgcggccgc 200 Score = 42.1 bits (21), Expect = 0.23 Identities = 27/29 (93%) Strand = Plus / Minus Query: 21 tgcggccgcggccgctgccgcggccgctg 49 |||||||||||| || ||||||||||||| Sbjct: 201 tgcggccgcggcggcggccgcggccgctg 173
>gb|AY850006.1| Volvox carteri f. nagariensis arsenite-resistance protein mRNA, complete cds Length = 2716 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgctg 49 ||||||||||| ||||||||||||| Sbjct: 1722 gccgcggccgcggccgcggccgctg 1698 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 1700 gcggccgcggccgcggccgcggc 1722
>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence Length = 129655 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 cgcggccgctgccgcggccgc 47 ||||||||||||||||||||| Sbjct: 51710 cgcggccgctgccgcggccgc 51690
>ref|XM_463280.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1962 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgctg 49 ||||||||||||||||| ||||||| Sbjct: 684 gccgcggccgctgccgctgccgctg 708
>ref|XM_469257.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 cgcggccgctgccgcggccgc 47 ||||||||||||||||||||| Sbjct: 270 cgcggccgctgccgcggccgc 290
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 cgcggccgctgccgcggccgc 47 ||||||||||||||||||||| Sbjct: 26403670 cgcggccgctgccgcggccgc 26403650 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccg 46 |||||||||||||||||||| |||| Sbjct: 12526448 gcggccgcggccgctgccgccgccg 12526472
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03, from chromosome 3, complete sequence Length = 124550 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggccg 46 |||||||||||||||||||| |||| Sbjct: 61493 gcggccgcggccgctgccgccgccg 61469
>gb|DQ172415.1| Equid herpesvirus 1 isolate US99_3_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172402.1| Equid herpesvirus 1 isolate US85_3_1 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172398.1| Equid herpesvirus 1 isolate US83_3_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172396.1| Equid herpesvirus 1 isolate US81_1_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172395.1| Equid herpesvirus 1 isolate US81_1_1 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172392.1| Equid herpesvirus 1 isolate US75_1_1 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172391.1| Equid herpesvirus 1 isolate US72_1_0 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172389.1| Equid herpesvirus 1 isolate US41_1_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172388.1| Equid herpesvirus 1 isolate US03_9_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172387.1| Equid herpesvirus 1 isolate US03_8_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172385.1| Equid herpesvirus 1 isolate US03_6_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172379.1| Equid herpesvirus 1 isolate US03_11_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172378.1| Equid herpesvirus 1 isolate US03_10_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172377.1| Equid herpesvirus 1 isolate US02_1_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172376.1| Equid herpesvirus 1 isolate US01_2_1 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172375.1| Equid herpesvirus 1 isolate US01_1_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172373.1| Equid herpesvirus 1 isolate PL68_1_0 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>gb|DQ172325.1| Equid herpesvirus 1 isolate CA89_1_2 ORF68 gene, partial cds Length = 600 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 417 cggccgccgccgctgccgcggccgc 393
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggccg 46 |||||||||||||| |||||||||| Sbjct: 287331 gcggccgcggccgcggccgcggccg 287307 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||||||||| ||||||||||| Sbjct: 287307 cggccgcggccgcggccgcggccgc 287331 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggcc 45 |||||||||||||| ||||||||| Sbjct: 287312 gcggccgcggccgcggccgcggcc 287335 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ggccgcggccgctgccgcggccgc 47 |||||||||||| ||||||||||| Sbjct: 287335 ggccgcggccgcggccgcggccgc 287312
>emb|AJ720642.1| Gallus gallus mRNA for hypothetical protein, clone 22j23 Length = 2616 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccg 46 |||||||||||||| |||||||||| Sbjct: 84 gcggccgcggccgcggccgcggccg 108 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||||||||| ||||||||||| Sbjct: 108 cggccgcggccgcggccgcggccgc 84 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ggccgcggccgctgccgcggccgc 47 |||||||||||| ||||||||||| Sbjct: 80 ggccgcggccgcggccgcggccgc 103 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggcc 45 |||||||||||||| ||||||||| Sbjct: 103 gcggccgcggccgcggccgcggcc 80
>gb|AF106962.2| Volvox carteri f. nagariensis RlsA (rlsA) gene, partial cds; and somatic regenerator RegA (regA) gene, complete cds Length = 22280 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgccgcggcc 45 ||||||||||||||| ||||||||| Sbjct: 14485 tgcggccgcggccgcggccgcggcc 14509 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ggccgcggccgctgccgcggccgc 47 |||||||||||| ||||||||||| Sbjct: 14509 ggccgcggccgcggccgcggccgc 14486
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggccg 46 |||||||||||||||||||| |||| Sbjct: 150541 gcggccgcggccgctgccgccgccg 150517
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgctg 49 ||||||||||| ||||||||||||| Sbjct: 16629374 gccgcggccgcggccgcggccgctg 16629350 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 16629352 gcggccgcggccgcggccgcggc 16629374 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 16629365 gcggccgcggccgctgccg 16629347 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 16610498 gcggccgcggccgctgccg 16610480
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 cgcggccgctgccgcggccgc 47 ||||||||||||||||||||| Sbjct: 26494979 cgcggccgctgccgcggccgc 26494959 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccg 46 |||||||||||||||||||| |||| Sbjct: 12523211 gcggccgcggccgctgccgccgccg 12523235
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgctg 49 ||||||||||||||||| ||||||| Sbjct: 18299982 gccgcggccgctgccgctgccgctg 18299958 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgc 41 |||||||||||||||||||| Sbjct: 15478011 gcggccgcggccgctgccgc 15478030 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 6616935 gcggccgcggccgctgccg 6616953 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 ggccgctgccgcggccgct 48 ||||||||||||||||||| Sbjct: 5171586 ggccgctgccgcggccgct 5171604 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 gcggaggtgcggccgcggc 32 ||||||||||||||||||| Sbjct: 4294925 gcggaggtgcggccgcggc 4294943
>dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1108H10 Length = 136357 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgctg 49 ||||||||||||||||| ||||||| Sbjct: 57316 gccgcggccgctgccgctgccgctg 57292
>emb|Z67986.1|EHV1SGNS Equine herpesvirus type 1 host range factor gene, Us10 protein gene, gene 67 and gene 68 Length = 4928 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||| ||||||||||||||||| Sbjct: 3958 cggccgccgccgctgccgcggccgc 3982
>dbj|AK107289.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-B09, full insert sequence Length = 2225 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgctg 49 ||||||||||| ||||||||||||| Sbjct: 889 gccgcggccgcggccgcggccgctg 865 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 867 gcggccgcggccgcggccgcggc 889 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 880 gcggccgcggccgctgccg 862
>ref|NM_001012894.1| Gallus gallus SMYD family member 5 (SMYD5), mRNA Length = 2616 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccg 46 |||||||||||||| |||||||||| Sbjct: 84 gcggccgcggccgcggccgcggccg 108 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgcggccgc 47 ||||||||||||| ||||||||||| Sbjct: 108 cggccgcggccgcggccgcggccgc 84 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ggccgcggccgctgccgcggccgc 47 |||||||||||| ||||||||||| Sbjct: 80 ggccgcggccgcggccgcggccgc 103 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggcc 45 |||||||||||||| ||||||||| Sbjct: 103 gcggccgcggccgcggccgcggcc 80
>ref|NM_208448.1| Eremothecium gossypii ABR148Wp (ABR148W), mRNA Length = 870 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctga 50 ||||||||||||||||||||| Sbjct: 805 ggccgctgccgcggccgctga 785
>dbj|AK063092.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-B03, full insert sequence Length = 476 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 cgcggccgctgccgcggccgc 47 ||||||||||||||||||||| Sbjct: 206 cgcggccgctgccgcggccgc 226
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgctg 49 ||||||||||| ||||||||||||| Sbjct: 16582607 gccgcggccgcggccgcggccgctg 16582583 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 16582585 gcggccgcggccgcggccgcggc 16582607 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 16582598 gcggccgcggccgctgccg 16582580 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 16563731 gcggccgcggccgctgccg 16563713
>emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129944 Score = 42.1 bits (21), Expect = 0.23 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgctg 49 ||||||||||| ||||||||||||| Sbjct: 41392 gccgcggccgcggccgcggccgctg 41416 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 60268 gcggccgcggccgctgccg 60286 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 41401 gcggccgcggccgctgccg 41419 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 41414 gcggccgcggccgcggccgcggc 41392
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctga 50 ||||||||||||||||||||| Sbjct: 678762 ggccgctgccgcggccgctga 678742
>ref|XM_466646.1| Oryza sativa (japonica cultivar-group), mRNA Length = 990 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tgcggccgcggccgctgccgcggc 44 ||||||||||||||| |||||||| Sbjct: 649 tgcggccgcggccgccgccgcggc 626
>ref|NM_193872.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1503 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgc 41 |||||||||||||||||||| Sbjct: 58 gcggccgcggccgctgccgc 77
>ref|XM_599250.2| PREDICTED: Bos taurus similar to patched (LOC520994), partial mRNA Length = 3969 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tgcggccgcggccgctgccg 40 |||||||||||||||||||| Sbjct: 53 tgcggccgcggccgctgccg 34
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 Score = 40.1 bits (20), Expect = 0.91 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggccgctg 49 ||||||||||||||||| || ||||||| Sbjct: 244778 gcggccgcggccgctgctgccgccgctg 244805
>emb|CR956413.12| Pig DNA sequence from clone CH242-178F16 on chromosome 17, complete sequence Length = 73061 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggc 44 |||||||||||||||||||| Sbjct: 67942 gccgcggccgctgccgcggc 67961
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ccgcggccgctgccgcggcc 45 |||||||||||||||||||| Sbjct: 31382 ccgcggccgctgccgcggcc 31401
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ccgcggccgctgccgcggcc 45 |||||||||||||||||||| Sbjct: 62182 ccgcggccgctgccgcggcc 62201
>emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chromosome 9q22.1-22.33 Contains the PTCH gene for patched homolog, a novel gene, the gene for a novel protein similar to a metallothionein protein (MT1) and three CpG islands, complete sequence Length = 189643 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tgcggccgcggccgctgccg 40 |||||||||||||||||||| Sbjct: 52293 tgcggccgcggccgctgccg 52274
>gb|AC148582.14| Gasterosteus aculeatus clone ch213-241e10, complete sequence Length = 209278 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgccgcggc 44 |||||||||||||||||| ||||| Sbjct: 202227 tgcggccgcggccgctgcggcggc 202250
>gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, complete sequence Length = 161654 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgc 41 |||||||||||||||||||| Sbjct: 62684 gcggccgcggccgctgccgc 62665
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tgcggccgcggccgctgccgcggc 44 ||||||||||||||| |||||||| Sbjct: 23865656 tgcggccgcggccgccgccgcggc 23865633 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 31786629 gcggccgcggccgcagccgcggc 31786651
>ref|XM_394166.2| PREDICTED: Apis mellifera similar to ENSANGP00000005999 (LOC410689), mRNA Length = 1534 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ggccgcggccgctgccgcggccgc 47 |||||||||||| ||||||||||| Sbjct: 1113 ggccgcggccgcagccgcggccgc 1090
>ref|XM_345445.2| PREDICTED: Rattus norvegicus NK2 transcription factor related, locus 4 (Drosophila) (predicted) (Nkx2-4_predicted), mRNA Length = 1613 Score = 40.1 bits (20), Expect = 0.91 Identities = 26/28 (92%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggccgctg 49 |||||||| ||||||||||| ||||||| Sbjct: 269 gcggccgccgccgctgccgctgccgctg 242
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgc 41 |||||||||||||||||||| Sbjct: 5079423 gcggccgcggccgctgccgc 5079442
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 40.1 bits (20), Expect = 0.91 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgc 41 |||||||||||||||||||| Sbjct: 35520 gcggccgcggccgctgccgc 35539
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tgcggccgcggccgctgccgcggc 44 ||||||||||||||| |||||||| Sbjct: 87322 tgcggccgcggccgccgccgcggc 87299
>dbj|D78260.1|HUMGATABP Homo sapiens mRNA for GATA-4 transcription factor, complete cds Length = 1869 Score = 40.1 bits (20), Expect = 0.91 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggcc 45 |||||||| ||||||||||||||| Sbjct: 647 gcggccgccgccgctgccgcggcc 670
>gb|AY167048.1| Homo sapiens specificity protein 8 short isoform (SP8) mRNA, complete cds Length = 1606 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 363 gccgcggctgctgccgcggccgc 341
>gb|AY167047.1| Homo sapiens specificity protein 8 long isoform (SP8) mRNA, complete cds Length = 1618 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 375 gccgcggctgctgccgcggccgc 353
>ref|XM_550405.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1950 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 gcggaggtgcggccgcggc 32 ||||||||||||||||||| Sbjct: 1860 gcggaggtgcggccgcggc 1842
>ref|NM_188241.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 312 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgct 48 ||||||||||||||||||| Sbjct: 57 ggccgctgccgcggccgct 39
>ref|XM_467861.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1983 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 272 gcggccgcggccgcagccgcggc 250
>ref|XM_528015.1| PREDICTED: Pan troglodytes similar to Transcription factor Sp8 (LOC472642), mRNA Length = 1545 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 842 gccgcggctgctgccgcggccgc 820
>ref|XM_525900.1| PREDICTED: Pan troglodytes similar to Homeobox protein engrailed-1 (Hu-En-1) (LOC470519), mRNA Length = 3249 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||||||| ||||| Sbjct: 2066 gccgcggccgctgccgccgccgc 2044
>ref|NM_193019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 741 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 26 gccgcggccgccgccgcggccgc 4
>ref|NM_006168.1| Homo sapiens NK6 transcription factor related, locus 1 (Drosophila) (NKX6-1), mRNA Length = 1116 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 424 gccgcggctgctgccgcggccgc 446
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 211276 gcggccgcggccgctgccg 211294
>gb|AC005606.3| Homo sapiens chromosome 16, P1 clone 109-8C (LANL), complete sequence Length = 80662 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 49123 ggccgctgccgctgccgctgatg 49101
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 83432 cggccgcggccgctgccgc 83414
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 5313 cggccgcggccgctgccgc 5295
>gb|AC163008.9| Mus musculus chromosome 15, clone RP23-105P11, complete sequence Length = 211071 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 6824 cggccgcggccgctgccgc 6842
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 gtgcggccgcggccgctgccgcg 42 ||||||| ||||||||||||||| Sbjct: 1186276 gtgcggcggcggccgctgccgcg 1186254
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 27 cgcggccgctgccgcggccgctg 49 ||||||||| ||||||||||||| Sbjct: 123996 cgcggccgcggccgcggccgctg 123974 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 123989 gcggccgcggccgctgccg 123971
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 38.2 bits (19), Expect = 3.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 21 tgcggccgcggccgctgccgcggccgc 47 |||||| || ||||||||||||||||| Sbjct: 2216508 tgcggcggctgccgctgccgcggccgc 2216482
>gb|BC017199.2| Homo sapiens paired-like homeobox 2b, mRNA (cDNA clone MGC:1678 IMAGE:3161284), complete cds Length = 1497 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 854 gccgccgccgctgccgcggccgc 832
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcgg 43 ||||||||||||||||||| Sbjct: 3535564 gccgcggccgctgccgcgg 3535582
>ref|NM_198956.1| Homo sapiens Sp8 transcription factor (SP8), transcript variant 2, mRNA Length = 3766 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 471 gccgcggctgctgccgcggccgc 449
>ref|NM_182700.2| Homo sapiens Sp8 transcription factor (SP8), transcript variant 1, mRNA Length = 3670 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 375 gccgcggctgctgccgcggccgc 353
>gb|AC149044.1| Pan troglodytes chromosome X clone PTB-089E19 map human ortholog q27.1, complete sequence Length = 193569 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 21542 gccgccgccgctgccgcggccgc 21520
>ref|NM_004209.4| Homo sapiens synaptogyrin 3 (SYNGR3), mRNA Length = 2054 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 66 ggccgctgccgctgccgctgatg 44
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 27 cgcggccgctgccgcggccgctg 49 ||||||||| ||||||||||||| Sbjct: 56977 cgcggccgcggccgcggccgctg 56955 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 56970 gcggccgcggccgctgccg 56952
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 cggccgctgccgcggccgc 47 ||||||||||||||||||| Sbjct: 1596124 cggccgctgccgcggccgc 1596142
>gb|AY180107.1| Zea mays cultivar B73 liguleless2-like protein gene, complete cds Length = 10851 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 3931 tgcggccgcggccgctgcc 3949
>gb|AC146155.3| Pan troglodytes BAC clone RP43-37F3 from 7, complete sequence Length = 159409 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 126476 gccgcggctgctgccgcggccgc 126454
>ref|NM_003924.2| Homo sapiens paired-like homeobox 2b (PHOX2B), mRNA Length = 3029 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 1118 gccgccgccgctgccgcggccgc 1096
>gb|BC059241.1| Mus musculus zinc finger protein, multitype 2, mRNA (cDNA clone MGC:67008 IMAGE:6408975), complete cds Length = 4832 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 400 cggccgcggccgctgccgc 382
>gb|AC005060.3| Homo sapiens BAC clone CTB-86D3 from 7, complete sequence Length = 120169 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 119898 gccgcggctgctgccgcggccgc 119920
>gb|BC009568.1| Homo sapiens synaptogyrin 3, mRNA (cDNA clone MGC:12440 IMAGE:3932502), complete cds Length = 1243 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 34 ggccgctgccgctgccgctgatg 12
>gb|AC113124.9| Mus musculus chromosome 19, clone RP23-350M1, complete sequence Length = 216547 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 186584 tgcggccgcggccgctgcc 186566
>gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, complete sequence Length = 164681 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 14617 cggccgcggccgctgccgc 14599
>emb|BX000476.5| Human DNA sequence from clone LL0XNC01-148H9 on chromosome X Contains the 5' end of a variant of the gene for protein phosphatase 2A 48 kDa regulatory subunit (PR48) and seven CpG islands, complete sequence Length = 33340 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 ccgaaggcggaggtgcggc 26 ||||||||||||||||||| Sbjct: 20201 ccgaaggcggaggtgcggc 20219
>gb|AY313774.1| Mus musculus cytoplasmic polyadenylation element binding protein 3 (Cpeb3) mRNA, complete cds Length = 3148 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 762 tgcggccgcggccgctgcc 780
>emb|AL121875.10|HSBA51C14 Human DNA sequence from clone RP11-51C14 on chromosome Xq26.2-27.3 Contains an embryonic ectoderm development (EED) pseudogene, a ribosomal protein S17 (RPS17) pseudogene, the SOX3 gene for SRY (sex determining region Y)-box 3 and three CpG islands, complete sequence Length = 148598 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 106535 gccgccgccgctgccgcggccgc 106513
>emb|X71135.1|HSSOX3 H.sapiens sox3 gene Length = 2509 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 1150 gccgccgccgctgccgcggccgc 1172
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 gcggccgctgccgcggccgctga 50 ||||| ||||||||||||||||| Sbjct: 262734 gcggctgctgccgcggccgctga 262712
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 gcggccgctgccgcggccgctga 50 ||||| ||||||||||||||||| Sbjct: 206929 gcggctgctgccgcggccgctga 206907
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 gcggccgctgccgcggccgctga 50 ||||| ||||||||||||||||| Sbjct: 202988 gcggctgctgccgcggccgctga 203010
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 ggccgcggccgctgccgcg 42 ||||||||||||||||||| Sbjct: 314230 ggccgcggccgctgccgcg 314248
>gb|BC038669.1| Homo sapiens Sp8 transcription factor, mRNA (cDNA clone MGC:41921 IMAGE:5259444), complete cds Length = 3581 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 375 gccgcggctgctgccgcggccgc 353
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 ||||||||||| ||||||||||| Sbjct: 139086 gcggccgcggcggctgccgcggc 139108
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 306048 gcggccgcggccgcggccgcggc 306070 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 306070 gccgcggccgcggccgcggccgc 306048
>emb|AL596386.16| Mouse DNA sequence from clone RP23-331I21 on chromosome 11 Contains the 3' end of the Myo15 gene for myosin XV, a novel gene, eleven ubiquitin pseudogenes, four poly A binding protein, cytoplasmic 4 (Pabpc4) pseudogenes and a CpG island, complete sequence Length = 201663 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 54609 gccgctgccgctgccgcggccgc 54631
>emb|AJ575648.1|STH575648 Streptomyces thioluteus aureothin biosynthesis gene cluster (aurABCDEFGHI genes), strain HKI-22 Length = 29132 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 ccgcggccgctgccgcggc 44 ||||||||||||||||||| Sbjct: 6335 ccgcggccgctgccgcggc 6317
>emb|AJ242474.1|ZMA242474 Zea mays mRNA for CMP-KDO synthetase (cks gene) Length = 1342 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 157 gcggccgcggccgctgccg 175
>emb|CR339064.10| Zebrafish DNA sequence from clone CH211-152J3 in linkage group 23, complete sequence Length = 98209 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 ggaggtgcggccgcggccg 34 ||||||||||||||||||| Sbjct: 55656 ggaggtgcggccgcggccg 55638
>emb|CR385029.5| Opossum DNA sequence from clone XX-191G11, complete sequence Length = 123110 Score = 38.2 bits (19), Expect = 3.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 23 cggccgcggccgctgccgcggccgctg 49 ||||||| ||||||||||| ||||||| Sbjct: 45841 cggccgctgccgctgccgctgccgctg 45867
>emb|CR616926.1| full-length cDNA clone CS0DF034YH04 of Fetal brain of Homo sapiens (human) Length = 1968 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 28 ggccgctgccgctgccgctgatg 6
>emb|CR608497.1| full-length cDNA clone CS0DI044YA22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1996 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 62 ggccgctgccgctgccgctgatg 40
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 19 ggtgcggccgcggccgctgccgc 41 |||||||| |||||||||||||| Sbjct: 3184 ggtgcggcagcggccgctgccgc 3206
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 19 ggtgcggccgcggccgctgccgc 41 |||||||| |||||||||||||| Sbjct: 87810 ggtgcggcagcggccgctgccgc 87832 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||||||||| |||||||| Sbjct: 41080 gccgcggccgctgcagcggccgc 41102
>dbj|AK056857.1| Homo sapiens cDNA FLJ32295 fis, clone PROST2001823, weakly similar to TRANSCRIPTION FACTOR SP1 Length = 3471 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 375 gccgcggctgctgccgcggccgc 353
>emb|CR597024.1| full-length cDNA clone CS0DL009YF11 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1958 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 27 ggccgctgccgctgccgctgatg 5
>tpg|BK000841.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M208, complete sequence Length = 1206 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 ggccgctgccgcggccgct 48 ||||||||||||||||||| Sbjct: 678 ggccgctgccgcggccgct 696
>tpg|BK005124.1| TPA: TPA_inf: Homo sapiens two transmembrane domain family member A (TTMA) mRNA, complete cds Length = 1920 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 702 gccgcggccgccgccgcggccgc 724
>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence Length = 176602 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 21174 gcggccgcggccgcggccgcggc 21196 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 21196 gccgcggccgcggccgcggccgc 21174 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 21193 gcggccgcggccgcggccgcggc 21171 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 21171 gccgcggccgcggccgcggccgc 21193
>gb|AF499011.1| Gallus gallus cThy28 gene, exons 1 through 8 and complete cds Length = 9765 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 aggcggaggtgcggccgcggccg 34 ||||||||| ||||||||||||| Sbjct: 3703 aggcggaggggcggccgcggccg 3725
>ref|NM_079704.1| Drosophila melanogaster doublesex-Mab related 93B CG5737-RA (dmrt93B), mRNA Length = 978 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 852 ggccgctgccgccgccgctgatg 830
>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence Length = 187067 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 102704 gccgccgccgctgccgcggccgc 102726
>gb|AC096766.3| Homo sapiens BAC clone RP11-678H22 from 4, complete sequence Length = 173836 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 119277 gccgcggctgctgccgcggccgc 119255
>dbj|AK147243.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1001J07 product:cytoplasmic polyadenylation element binding protein 3, full insert sequence Length = 5660 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 1230 tgcggccgcggccgctgcc 1248
>gb|AY074760.1| Junonia coenia ultrabithorax (Ubx) mRNA, complete cds Length = 762 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||||||| ||||| Sbjct: 734 gccgcggccgctgccgccgccgc 712
>ref|XM_928409.1| PREDICTED: Homo sapiens similar to KIAA1913 (LOC645369), mRNA Length = 2455 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 1250 gccgcggccgccgccgcggccgc 1272
>dbj|AK163294.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020011O05 product:Hypothetical alanine-rich region/type I antifreeze protein/2OG-Fe, full insert sequence Length = 2821 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 431 gccgctgccgctgccgcggccgc 453
>ref|XM_680653.1| PREDICTED: Danio rerio similar to Bone morphogenetic protein 7 precursor (BMP-7) (Osteogenic protein 1) (OP-1) (LOC557567), mRNA Length = 1284 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 ggaggtgcggccgcggccg 34 ||||||||||||||||||| Sbjct: 211 ggaggtgcggccgcggccg 193
>dbj|AK162072.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420402E17 product:Hypothetical alanine-rich region/type I antifreeze protein/2OG-Fe, full insert sequence Length = 2900 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 432 gccgctgccgctgccgcggccgc 454
>gb|U34350.1|U34350 Gallus gallus thymocyte protein cThy28kD mRNA, complete cds Length = 1071 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 aggcggaggtgcggccgcggccg 34 ||||||||| ||||||||||||| Sbjct: 83 aggcggaggggcggccgcggccg 105
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||| ||||||||| Sbjct: 4474324 gccgcggccgctgacgcggccgc 4474302 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 107741 gccgcggccgccgccgcggccgc 107763
>ref|NM_011766.2| Mus musculus zinc finger protein, multitype 2 (Zfpm2), mRNA Length = 4992 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 501 cggccgcggccgctgccgc 483
>dbj|AK161513.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933430J08 product:cytoplasmic polyadenylation element binding protein 3, full insert sequence Length = 2097 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 916 tgcggccgcggccgctgcc 934
>gb|BC052076.1| Mus musculus alkB, alkylation repair homolog 5 (E. coli), mRNA (cDNA clone MGC:62491 IMAGE:6401541), complete cds Length = 3044 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 465 gccgctgccgctgccgcggccgc 487
>ref|NM_172943.2| Mus musculus alkB, alkylation repair homolog 5 (E. coli) (Alkbh5), mRNA Length = 3116 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 564 gccgctgccgctgccgcggccgc 586
>emb|BX950750.2| Gallus gallus finished cDNA, clone ChEST819k15 Length = 1068 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 aggcggaggtgcggccgcggccg 34 ||||||||| ||||||||||||| Sbjct: 88 aggcggaggggcggccgcggccg 110
>dbj|AK029261.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831444O18 product:KIAA0940 PROTEIN homolog [Homo sapiens], full insert sequence Length = 2411 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 822 tgcggccgcggccgctgcc 840
>dbj|AK046521.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length enriched library, clone:B330005D23 product:zinc finger protein, multitype 2, full insert sequence Length = 3007 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 508 cggccgcggccgctgccgc 490
>dbj|AK049130.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330005L13 product:hypothetical protein, full insert sequence Length = 2671 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 544 gccgctgccgctgccgcggccgc 566
>dbj|AK044639.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930029D04 product:KIAA0940 PROTEIN homolog [Homo sapiens], full insert sequence Length = 4223 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 942 tgcggccgcggccgctgcc 960
>dbj|AK053700.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130210D21 product:hypothetical Alanine-rich region/Type I antifreeze protein/2OG-Fe(II) oxygenase superfamily containing protein, full insert sequence Length = 2992 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 431 gccgctgccgctgccgcggccgc 453
>dbj|AK053695.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130207K11 product:hypothetical Alanine-rich region/Type I antifreeze protein/2OG-Fe(II) oxygenase superfamily containing protein, full insert sequence Length = 3116 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 564 gccgctgccgctgccgcggccgc 586
>dbj|AK033131.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030444C01 product:zinc finger protein, multitype 2, full insert sequence Length = 1606 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 192 cggccgcggccgctgccgc 174
>gb|AF322136.1|AF322136 Sorghum australiense teosinte branched1 protein (tb1) gene, partial cds Length = 1068 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 352 gcggccgcggccgcggccgcggc 374 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 374 gccgcggccgcggccgcggccgc 352
>gb|AF322135.1|AF322135 Sorghum matarakense teosinte branched1 protein (tb1) gene, partial cds Length = 1068 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 352 gcggccgcggccgcggccgcggc 374 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 374 gccgcggccgcggccgcggccgc 352
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 28278632 cggccgcggccgctgccgc 28278614 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 27 cgcggccgctgccgcggccgctg 49 ||||||||| ||||||||||||| Sbjct: 1985422 cgcggccgcggccgcggccgctg 1985400 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 1985415 gcggccgcggccgctgccg 1985397
>ref|XM_394607.2| PREDICTED: Apis mellifera similar to CG6634-PA (LOC411133), mRNA Length = 1089 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 269 gccgccgccgctgccgcggccgc 247
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 6945321 gcggccgcggccgctgccg 6945303
>gb|AC009348.6|AC009348 Drosophila melanogaster, chromosome 3R, region 93A-93B, BAC clone BACR05I01, complete sequence Length = 187151 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 174634 ggccgctgccgccgccgctgatg 174612
>gb|AC009344.8|AC009344 Drosophila melanogaster, chromosome 3R, region 93A-93B, BAC clone BACR20N14, complete sequence Length = 173634 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 30208 ggccgctgccgccgccgctgatg 30186
>gb|AF215839.1|AF215839 Homo sapiens chromosome X clone PPP2R3LX map Xp22, complete sequence Length = 42584 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 ccgaaggcggaggtgcggc 26 ||||||||||||||||||| Sbjct: 8932 ccgaaggcggaggtgcggc 8914
>gb|BC093865.1| Homo sapiens SRY (sex determining region Y)-box 3, mRNA (cDNA clone MGC:120900 IMAGE:7939710), complete cds Length = 1421 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 765 gccgccgccgctgccgcggccgc 787
>gb|BC093863.1| Homo sapiens SRY (sex determining region Y)-box 3, mRNA (cDNA clone MGC:120898 IMAGE:7939708), complete cds Length = 1431 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 765 gccgccgccgctgccgcggccgc 787
>gb|AF117979.1|AF117979 Homo sapiens homeodomain transcription factor NBPHOX (PMX2B) gene, complete cds Length = 4885 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 2974 gccgccgccgctgccgcggccgc 2952
>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498B01 Length = 146812 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 ggccgctgccgcggccgct 48 ||||||||||||||||||| Sbjct: 103617 ggccgctgccgcggccgct 103635
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 ggtgcggccgcggccgctg 37 ||||||||||||||||||| Sbjct: 4656468 ggtgcggccgcggccgctg 4656486 Score = 38.2 bits (19), Expect = 3.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgccgcggccgc 47 ||||||| ||||||| ||||||||||| Sbjct: 3954956 tgcggccccggccgcggccgcggccgc 3954982
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 97106 gcggccgcggccgctgccg 97124
>gb|AF264713.1|AF264713 Homo sapiens sex determining region Y box 3 (SOX3) gene, complete cds Length = 1692 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 826 gccgccgccgctgccgcggccgc 848
>emb|AL935305.13| Zebrafish DNA sequence from clone CH211-226I4 in linkage group 23, complete sequence Length = 190222 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 ggaggtgcggccgcggccg 34 ||||||||||||||||||| Sbjct: 53166 ggaggtgcggccgcggccg 53184
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 gcggaggtgcggccgcggc 32 ||||||||||||||||||| Sbjct: 74695 gcggaggtgcggccgcggc 74713
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 134846 gcggccgcggccgctgccg 134828
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 4748 gcggccgcggccgctgccg 4730
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccgcggc 44 |||||||||||||| |||||||| Sbjct: 82427 gcggccgcggccgcagccgcggc 82449
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 gccgctgccgcggccgctg 49 ||||||||||||||||||| Sbjct: 63132 gccgctgccgcggccgctg 63114
>dbj|AB099485.1| Mizuhopecten yessoensis canbp75 mRNA for calcineurin-binding protein of 75 kDa, complete cds Length = 1552 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 19 ggtgcggccgcggccgctgccgc 41 ||||||||||| ||||||||||| Sbjct: 637 ggtgcggccgccgccgctgccgc 659
>dbj|AK110478.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-A02, full insert sequence Length = 2973 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 gccgctgccgcggccgctg 49 ||||||||||||||||||| Sbjct: 740 gccgctgccgcggccgctg 758
>emb|AJ322962.1|HSA322962 Homo sapiens genomic sequence surrounding NotI site, clone NR1-ML6C Length = 664 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 23 gccgccgccgctgccgcggccgc 1
>emb|AJ331681.1|HSA331681 Homo sapiens genomic sequence surrounding NotI site, clone NR5-GL10C Length = 850 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 23 gccgcggctgctgccgcggccgc 1
>dbj|AK070991.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077I08, full insert sequence Length = 917 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 803 gcggccgcggccgctgccg 821
>gb|AC123827.4| Mus musculus BAC clone RP24-100N12 from 5, complete sequence Length = 185363 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 tgatggtagaggccatcac 66 ||||||||||||||||||| Sbjct: 67267 tgatggtagaggccatcac 67249
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 35278 gccgcggccgccgccgcggccgc 35256
>gb|AY108697.1| Zea mays PCO126508 mRNA sequence Length = 1558 Score = 38.2 bits (19), Expect = 3.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 14 gcggaggtgcggccgcggccgctgccg 40 ||||||| |||||||||||||| |||| Sbjct: 141 gcggaggcgcggccgcggccgcggccg 167
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 gctgccgcggccgctgatg 52 ||||||||||||||||||| Sbjct: 2122838 gctgccgcggccgctgatg 2122856
>gb|AF125166.1|AF125166 Mus musculus zinc-finger factor FOG2 (Fog2) mRNA, complete cds Length = 4992 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 501 cggccgcggccgctgccgc 483
>gb|AE003733.3| Drosophila melanogaster chromosome 3R, section 71 of 118 of the complete sequence Length = 235707 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ggccgctgccgcggccgctgatg 52 |||||||||||| |||||||||| Sbjct: 98497 ggccgctgccgccgccgctgatg 98475
>gb|AF118845.1|AF118845 Mus musculus FOG2 transcription factor (Fog2) mRNA, complete cds Length = 4770 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 270 cggccgcggccgctgccgc 252
>gb|U66797.1|HSNKHBP1 Human NK homeobox protein (Nkx6.1) gene, exon 1 Length = 682 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 |||||||| |||||||||||||| Sbjct: 424 gccgcggctgctgccgcggccgc 446
>dbj|AB093274.1| Mus musculus mRNA for mKIAA0940 protein Length = 5310 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 869 tgcggccgcggccgctgcc 887
>ref|NM_198300.2| Mus musculus cytoplasmic polyadenylation element binding protein 3 (Cpeb3), mRNA Length = 5792 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 762 tgcggccgcggccgctgcc 780
>emb|BX510328.3| Human DNA sequence from clone XX-85689E12 on chromosome X, complete sequence Length = 21252 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 ccgaaggcggaggtgcggc 26 ||||||||||||||||||| Sbjct: 16079 ccgaaggcggaggtgcggc 16097
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cggccgcggccgctgccgc 41 ||||||||||||||||||| Sbjct: 28263209 cggccgcggccgctgccgc 28263191 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 27 cgcggccgctgccgcggccgctg 49 ||||||||| ||||||||||||| Sbjct: 1993203 cgcggccgcggccgcggccgctg 1993181 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gcggccgcggccgctgccg 40 ||||||||||||||||||| Sbjct: 1993196 gcggccgcggccgctgccg 1993178
>dbj|AP005433.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-945C19, complete sequence Length = 146000 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||| ||||||||||| Sbjct: 134599 gccgcggccgccgccgcggccgc 134577
>gb|U63300.1|MSU63300 Manduca sexta UBX (Ubx) gene, partial cds Length = 477 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||||||| ||||| Sbjct: 274 gccgcggccgctgccgccgccgc 252
>gb|AC161238.7| Mus musculus chromosome 19, clone RP24-288C19, complete sequence Length = 193445 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcggccgcggccgctgcc 39 ||||||||||||||||||| Sbjct: 171873 tgcggccgcggccgctgcc 171891
>ref|NM_005634.2| Homo sapiens SRY (sex determining region Y)-box 3 (SOX3), mRNA Length = 2074 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 709 gccgccgccgctgccgcggccgc 731
>ref|NM_204287.1| Gallus gallus thymocyte nuclear protein 1 (THYN1), mRNA Length = 1071 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 aggcggaggtgcggccgcggccg 34 ||||||||| ||||||||||||| Sbjct: 83 aggcggaggggcggccgcggccg 105
>gb|L42137.1|RPCUTX Precis coenia ultrabithorax homeodomain protein mRNA, 3' end of cds Length = 338 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||||||| ||||| Sbjct: 103 gccgcggccgctgccgccgccgc 81
>dbj|AB048758.1| Lampetra japonica mRNA for homeoprotein LjEMX, complete cds Length = 1291 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||||||||||||||| ||||| Sbjct: 444 gccgcggccgctgccgccgccgc 422
>dbj|D82344.1| Homo sapiens mRNA for NBPhox, complete cds Length = 3029 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 1118 gccgccgccgctgccgcggccgc 1096
>dbj|AB015671.1| Homo sapiens NBPhox gene, complete cds Length = 5508 Score = 38.2 bits (19), Expect = 3.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 gccgcggccgctgccgcggccgc 47 ||||| ||||||||||||||||| Sbjct: 3504 gccgccgccgctgccgcggccgc 3482
>emb|AL671897.6| Mouse DNA sequence from clone RP23-250A14 on chromosome X, complete sequence Length = 105208 Score = 38.2 bits (19), Expect = 3.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 tggtagaggccatcactag 69 ||||||||||||||||||| Sbjct: 89409 tggtagaggccatcactag 89391 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 565,583 Number of Sequences: 3902068 Number of extensions: 565583 Number of successful extensions: 75190 Number of sequences better than 10.0: 202 Number of HSP's better than 10.0 without gapping: 209 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72113 Number of HSP's gapped (non-prelim): 2977 length of query: 85 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 64 effective length of database: 17,151,101,840 effective search space: 1097670517760 effective search space used: 1097670517760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
