ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467966.1| Oryza sativa (japonica cultivar-group), mRNA 396 e-107
2ref|XM_506992.1| PREDICTED Oryza sativa (japonica cultivar-group... 396 e-107
3dbj|AK103640.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107
4dbj|AK063351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
6dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
7dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
8emb|CR406345.1| Gallus gallus finished cDNA, clone ChEST860c20 46 0.098
9dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.098
10emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 44 0.39
11gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 42 1.5
12ref|XM_482570.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
13gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.5
14ref|XM_957186.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
15ref|XM_328398.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
16ref|XM_546606.2| PREDICTED: Canis familiaris similar to period 1... 42 1.5
17gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome 42 1.5
18gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, r... 42 1.5
19gb|AC009182.4|AC009182 Drosophila melanogaster, chromosome 2R, r... 42 1.5
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
22gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 42 1.5
23emb|AJ277735.1|SSC277735 Sus scrofa per1 gene for Period protein... 42 1.5
24gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.1
25gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 40 6.1
26gb|DQ223042.1| Murine norovirus 3 polyprotein, capsid protein, a... 40 6.1
27gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 40 6.1
28gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.1
29gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
30gb|AY813888.1| Schistosoma japonicum SJCHGC04485 protein mRNA, c... 40 6.1
31gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, comp... 40 6.1
32ref|XM_752675.1| Ustilago maydis 521 hypothetical protein (UM016... 40 6.1
33ref|XM_390035.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 6.1
34gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome... 40 6.1
35gb|AY935268.1| Antirrhinum majus farinelli (FAR) gene, complete ... 40 6.1
36gb|AC091204.3| Drosophila melanogaster 3L NOVECTOR RP98-27G13 (R... 40 6.1
37emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 6.1
38tpg|BK002805.1| TPA: TPA_inf: Drosophila melanogaster HDC15392 (... 40 6.1
39gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.1
40dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
41dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
42dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
43gb|AC008366.3|AC008366 Drosophila melanogaster, chromosome 3R, r... 40 6.1
44gb|AC008204.9|AC008204 Drosophila melanogaster, chromosome 3R, r... 40 6.1
45gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 40 6.1
46gb|AE009686.1| Brucella melitensis 16M chromosome II, section 48... 40 6.1
47dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
48gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 6.1
49dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
50dbj|AK100915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
51dbj|AK069189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
52gb|AE003747.3| Drosophila melanogaster chromosome 3R, section 85... 40 6.1
53emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chro... 40 6.1
54gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28... 40 6.1
55gb|U82397.1|RSU82397 Rhodobacter sphaeroides sigma-32 homolog (r... 40 6.1
56gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
57gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
58emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220... 40 6.1
59emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II... 40 6.1 
>ref|XM_467966.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1675

 Score =  396 bits (200), Expect = e-107
 Identities = 273/296 (92%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 157 tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 216
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 154 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 213

                                                                       
Query: 217 ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 276
           ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 214 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 273

                                                                       
Query: 277 tccctcctcctcatcacgctccgccaggtgaacagggagatactgatggaggaggataag 336
           |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |
Sbjct: 274 tccctcctcctcatcacgcttcgccaggcgaacagggagatactgatggaggaggacagg 333

                                                                       
Query: 337 gtgaagggggagacggaggcggccaaggcgcccgtcgactccacgacgctgaggctgcac 396
           ||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||||
Sbjct: 334 gtgaaggcggagacggaggcggcgaaggcgcccgtggactccacgacgctgcagctgcac 393

                                                                   
Query: 397 aacctgctgtacgagaag-accactacgtgaaggccatcaggtcgtgcctcgactt 451
           ||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 394 aaccttctgtacgagaagaaccactacgtgaaggccattagggcgtgcctcgactt 449



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 88  gcggcggaagccatggacgtcgaggcaccggcgcg 122
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 76  gcggccgaagccatggatgtcgaggcgccggcgcg 110
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>ref|XM_506992.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_A11.24
           mRNA
          Length = 1691

 Score =  396 bits (200), Expect = e-107
 Identities = 273/296 (92%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 157 tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 216
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 160 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 219

                                                                       
Query: 217 ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 276
           ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 220 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 279

                                                                       
Query: 277 tccctcctcctcatcacgctccgccaggtgaacagggagatactgatggaggaggataag 336
           |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |
Sbjct: 280 tccctcctcctcatcacgcttcgccaggcgaacagggagatactgatggaggaggacagg 339

                                                                       
Query: 337 gtgaagggggagacggaggcggccaaggcgcccgtcgactccacgacgctgaggctgcac 396
           ||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||||
Sbjct: 340 gtgaaggcggagacggaggcggcgaaggcgcccgtggactccacgacgctgcagctgcac 399

                                                                   
Query: 397 aacctgctgtacgagaag-accactacgtgaaggccatcaggtcgtgcctcgactt 451
           ||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 400 aaccttctgtacgagaagaaccactacgtgaaggccattagggcgtgcctcgactt 455



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 88  gcggcggaagccatggacgtcgaggcaccggcgcg 122
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 82  gcggccgaagccatggatgtcgaggcgccggcgcg 116
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>dbj|AK103640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134I01, full
           insert sequence
          Length = 1691

 Score =  396 bits (200), Expect = e-107
 Identities = 273/296 (92%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 157 tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 216
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 160 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 219

                                                                       
Query: 217 ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 276
           ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 220 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 279

                                                                       
Query: 277 tccctcctcctcatcacgctccgccaggtgaacagggagatactgatggaggaggataag 336
           |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |
Sbjct: 280 tccctcctcctcatcacgcttcgccaggcgaacagggagatactgatggaggaggacagg 339

                                                                       
Query: 337 gtgaagggggagacggaggcggccaaggcgcccgtcgactccacgacgctgaggctgcac 396
           ||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||||
Sbjct: 340 gtgaaggcggagacggaggcggcgaaggcgcccgtggactccacgacgctgcagctgcac 399

                                                                   
Query: 397 aacctgctgtacgagaag-accactacgtgaaggccatcaggtcgtgcctcgactt 451
           ||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 400 aaccttctgtacgagaagaaccactacgtgaaggccattagggcgtgcctcgactt 455



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 88  gcggcggaagccatggacgtcgaggcaccggcgcg 122
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 82  gcggccgaagccatggatgtcgaggcgccggcgcg 116
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>dbj|AK063351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C01, full
           insert sequence
          Length = 1675

 Score =  396 bits (200), Expect = e-107
 Identities = 273/296 (92%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 157 tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 216
           |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 154 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 213

                                                                       
Query: 217 ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 276
           ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 214 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 273

                                                                       
Query: 277 tccctcctcctcatcacgctccgccaggtgaacagggagatactgatggaggaggataag 336
           |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |
Sbjct: 274 tccctcctcctcatcacgcttcgccaggcgaacagggagatactgatggaggaggacagg 333

                                                                       
Query: 337 gtgaagggggagacggaggcggccaaggcgcccgtcgactccacgacgctgaggctgcac 396
           ||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||||
Sbjct: 334 gtgaaggcggagacggaggcggcgaaggcgcccgtggactccacgacgctgcagctgcac 393

                                                                   
Query: 397 aacctgctgtacgagaag-accactacgtgaaggccatcaggtcgtgcctcgactt 451
           ||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 394 aaccttctgtacgagaagaaccactacgtgaaggccattagggcgtgcctcgactt 449



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 88  gcggcggaagccatggacgtcgaggcaccggcgcg 122
           ||||| ||||||||||| |||||||| ||||||||
Sbjct: 76  gcggccgaagccatggatgtcgaggcgccggcgcg 110
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  208 bits (105), Expect = 1e-50
 Identities = 138/149 (92%)
 Strand = Plus / Plus

                                                                            
Query: 157      tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 216
                |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 32313986 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 32314045

                                                                            
Query: 217      ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 276
                ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 32314046 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 32314105

                                             
Query: 277      tccctcctcctcatcacgctccgccaggt 305
                |||||||||||||||||||| ||||||||
Sbjct: 32314106 tccctcctcctcatcacgcttcgccaggt 32314134



 Score =  198 bits (100), Expect = 1e-47
 Identities = 140/152 (92%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                            
Query: 301      caggtgaacagggagatactgatggaggaggataaggtgaagggggagacggaggcggcc 360
                |||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||||| 
Sbjct: 32314224 caggcgaacagggagatactgatggaggaggacagggtgaaggcggagacggaggcggcg 32314283

                                                                            
Query: 361      aaggcgcccgtcgactccacgacgctgaggctgcacaacctgctgtacgagaag-accac 419
                ||||||||||| |||||||||||||||  |||||||||||| |||||||||||| |||||
Sbjct: 32314284 aaggcgcccgtggactccacgacgctgcagctgcacaaccttctgtacgagaagaaccac 32314343

                                                
Query: 420      tacgtgaaggccatcaggtcgtgcctcgactt 451
                |||||||||||||| ||| |||||||||||||
Sbjct: 32314344 tacgtgaaggccattagggcgtgcctcgactt 32314375



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 88       gcggcggaagccatggacgtcgaggcaccggcgcg 122
                ||||| ||||||||||| |||||||| ||||||||
Sbjct: 32313908 gcggccgaagccatggatgtcgaggcgccggcgcg 32313942
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>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0539D10
          Length = 158691

 Score =  208 bits (105), Expect = 1e-50
 Identities = 138/149 (92%)
 Strand = Plus / Plus

                                                                          
Query: 157    tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 216
              |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 157999 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 158058

                                                                          
Query: 217    ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 276
              ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 158059 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 158118

                                           
Query: 277    tccctcctcctcatcacgctccgccaggt 305
              |||||||||||||||||||| ||||||||
Sbjct: 158119 tccctcctcctcatcacgcttcgccaggt 158147



 Score =  198 bits (100), Expect = 1e-47
 Identities = 140/152 (92%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                          
Query: 301    caggtgaacagggagatactgatggaggaggataaggtgaagggggagacggaggcggcc 360
              |||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||||| 
Sbjct: 158237 caggcgaacagggagatactgatggaggaggacagggtgaaggcggagacggaggcggcg 158296

                                                                          
Query: 361    aaggcgcccgtcgactccacgacgctgaggctgcacaacctgctgtacgagaag-accac 419
              ||||||||||| |||||||||||||||  |||||||||||| |||||||||||| |||||
Sbjct: 158297 aaggcgcccgtggactccacgacgctgcagctgcacaaccttctgtacgagaagaaccac 158356

                                              
Query: 420    tacgtgaaggccatcaggtcgtgcctcgactt 451
              |||||||||||||| ||| |||||||||||||
Sbjct: 158357 tacgtgaaggccattagggcgtgcctcgactt 158388



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 88     gcggcggaagccatggacgtcgaggcaccggcgcg 122
              ||||| ||||||||||| |||||||| ||||||||
Sbjct: 157921 gcggccgaagccatggatgtcgaggcgccggcgcg 157955
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>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A11
          Length = 132352

 Score =  208 bits (105), Expect = 1e-50
 Identities = 138/149 (92%)
 Strand = Plus / Plus

                                                                         
Query: 157   tccccccacgacctcctcgccgagacccgcgcctccgtcgaggaggtcgccgcccgcata 216
             |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || 
Sbjct: 89818 tccccccacgacctcctcgcggagacccgcgcctccgtggaggaggtcgccgcccggatc 89877

                                                                         
Query: 217   ctcgccatcaagaaggacggcgcccccaagtccgagctccgcgagctcgtcgcgcagatg 276
             ||||||||||||||||||| ||||||||   |||||||||| ||||||||||| ||||||
Sbjct: 89878 ctcgccatcaagaaggacgacgcccccagaaccgagctccgggagctcgtcgcccagatg 89937

                                          
Query: 277   tccctcctcctcatcacgctccgccaggt 305
             |||||||||||||||||||| ||||||||
Sbjct: 89938 tccctcctcctcatcacgcttcgccaggt 89966



 Score =  198 bits (100), Expect = 1e-47
 Identities = 140/152 (92%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                         
Query: 301   caggtgaacagggagatactgatggaggaggataaggtgaagggggagacggaggcggcc 360
             |||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||||| 
Sbjct: 90056 caggcgaacagggagatactgatggaggaggacagggtgaaggcggagacggaggcggcg 90115

                                                                         
Query: 361   aaggcgcccgtcgactccacgacgctgaggctgcacaacctgctgtacgagaag-accac 419
             ||||||||||| |||||||||||||||  |||||||||||| |||||||||||| |||||
Sbjct: 90116 aaggcgcccgtggactccacgacgctgcagctgcacaaccttctgtacgagaagaaccac 90175

                                             
Query: 420   tacgtgaaggccatcaggtcgtgcctcgactt 451
             |||||||||||||| ||| |||||||||||||
Sbjct: 90176 tacgtgaaggccattagggcgtgcctcgactt 90207



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 88    gcggcggaagccatggacgtcgaggcaccggcgcg 122
             ||||| ||||||||||| |||||||| ||||||||
Sbjct: 89740 gcggccgaagccatggatgtcgaggcgccggcgcg 89774
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>emb|CR406345.1| Gallus gallus finished cDNA, clone ChEST860c20
          Length = 1175

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 14  accatttccactcccacttccgg 36
           |||||||||||||||||||||||
Sbjct: 909 accatttccactcccacttccgg 887
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 187     gcctccgtcgaggaggtcgccgc 209
               |||||||||||||||||||||||
Sbjct: 5954584 gcctccgtcgaggaggtcgccgc 5954562
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>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86
          Length = 407339

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 336    ggtgaagggggagacggaggcg 357
              ||||||||||||||||||||||
Sbjct: 308907 ggtgaagggggagacggaggcg 308886



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    ggtgaagggggagacggagg 355
              ||||||||||||||||||||
Sbjct: 306306 ggtgaagggggagacggagg 306287
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 249    cgagctccgcgagctcgtcgc 269
              |||||||||||||||||||||
Sbjct: 145647 cgagctccgcgagctcgtcgc 145627



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 249    cgagctccgcgagctcgtcgc 269
              |||||||||||||||||||||
Sbjct: 128362 cgagctccgcgagctcgtcgc 128382
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>ref|XM_482570.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1110

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 251 agctccgcgagctcgtcgcgc 271
           |||||||||||||||||||||
Sbjct: 278 agctccgcgagctcgtcgcgc 298
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 160     ccccacgacctcctcgccgag 180
               |||||||||||||||||||||
Sbjct: 2414281 ccccacgacctcctcgccgag 2414301
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>ref|XM_957186.1| Neurospora crassa OR74A hypothetical protein (NCU07693.1) partial
            mRNA
          Length = 3411

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   cggaagccatggacgtcgagg 112
            |||||||||||||||||||||
Sbjct: 2699 cggaagccatggacgtcgagg 2679
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>ref|XM_328398.1| Neurospora crassa OR74A hypothetical protein (NCU07693.1) partial
            mRNA
          Length = 3411

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   cggaagccatggacgtcgagg 112
            |||||||||||||||||||||
Sbjct: 2699 cggaagccatggacgtcgagg 2679
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>ref|XM_546606.2| PREDICTED: Canis familiaris similar to period 1 (LOC489488), mRNA
          Length = 4266

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 74  tggcaaccgcggcggcggcggaagc 98
           |||| ||||||||||||||||||||
Sbjct: 270 tggcgaccgcggcggcggcggaagc 294
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>gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome
          Length = 63882

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 251   agctccgcgagctcgtcgcgc 271
             |||||||||||||||||||||
Sbjct: 17065 agctccgcgagctcgtcgcgc 17085
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>gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, region 59F5-59F8, BAC clone
              BACR02E09, complete sequence
          Length = 175118

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 15     ccatttccactcccacttccg 35
              |||||||||||||||||||||
Sbjct: 162971 ccatttccactcccacttccg 162991
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>gb|AC009182.4|AC009182 Drosophila melanogaster, chromosome 2R, region 60A2-60A3, BAC clone
             BACR05F24, complete sequence
          Length = 147086

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    ccatttccactcccacttccg 35
             |||||||||||||||||||||
Sbjct: 44084 ccatttccactcccacttccg 44104
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 251      agctccgcgagctcgtcgcgc 271
                |||||||||||||||||||||
Sbjct: 21148560 agctccgcgagctcgtcgcgc 21148580
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>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0413H11
          Length = 147655

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 251    agctccgcgagctcgtcgcgc 271
              |||||||||||||||||||||
Sbjct: 119770 agctccgcgagctcgtcgcgc 119790
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>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 15     ccatttccactcccacttccg 35
              |||||||||||||||||||||
Sbjct: 340569 ccatttccactcccacttccg 340589
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>emb|AJ277735.1|SSC277735 Sus scrofa per1 gene for Period protein, exons 2-14
          Length = 5040

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 74   tggcaaccgcggcggcggcggaagc 98
            |||| ||||||||||||||||||||
Sbjct: 1016 tggcgaccgcggcggcggcggaagc 1040
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     ccgcccagcgccaccaccgc 143
               ||||||||||||||||||||
Sbjct: 3574759 ccgcccagcgccaccaccgc 3574778
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>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cgccaccaccgcgccaaagc 151
              ||||||||||||||||||||
Sbjct: 480625 cgccaccaccgcgccaaagc 480644
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>gb|DQ223042.1| Murine norovirus 3 polyprotein, capsid protein, and small basic
            protein genes, complete cds
          Length = 7383

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 279  cctcctcctcatcacgctcc 298
            ||||||||||||||||||||
Sbjct: 2802 cctcctcctcatcacgctcc 2783
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>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     accgcggcggcggcggaagc 98
              ||||||||||||||||||||
Sbjct: 771282 accgcggcggcggcggaagc 771301
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 80      ccgcggcggcggcggaagcc 99
               ||||||||||||||||||||
Sbjct: 1038986 ccgcggcggcggcggaagcc 1039005
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>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0042J05, complete sequence
          Length = 150295

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ggcaaccgcggcggcggcgg 94
              ||||||||||||||||||||
Sbjct: 138795 ggcaaccgcggcggcggcgg 138776
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>gb|AY813888.1| Schistosoma japonicum SJCHGC04485 protein mRNA, complete cds
          Length = 469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 gatgtccctcctcctcatca 292
           ||||||||||||||||||||
Sbjct: 172 gatgtccctcctcctcatca 153
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>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence
          Length = 153903

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   ccgcccagcgccaccaccgc 143
             ||||||||||||||||||||
Sbjct: 60603 ccgcccagcgccaccaccgc 60584
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>ref|XM_752675.1| Ustilago maydis 521 hypothetical protein (UM01621.1) partial mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 362  aggcgcccgtcgactccacg 381
            ||||||||||||||||||||
Sbjct: 1321 aggcgcccgtcgactccacg 1302
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>ref|XM_390035.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09859.1)
           partial mRNA
          Length = 1947

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 ctccccccacgacctcctcg 175
           ||||||||||||||||||||
Sbjct: 80  ctccccccacgacctcctcg 61
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>gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome 5, complete sequence
          Length = 144545

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    ccgcccagcgccaccaccgc 143
              ||||||||||||||||||||
Sbjct: 134299 ccgcccagcgccaccaccgc 134280
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>gb|AY935268.1| Antirrhinum majus farinelli (FAR) gene, complete sequence
          Length = 54307

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 335   aggtgaagggggagacggaggcgg 358
             ||||||||| ||||||||||||||
Sbjct: 53001 aggtgaaggaggagacggaggcgg 52978
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>gb|AC091204.3| Drosophila melanogaster 3L NOVECTOR RP98-27G13 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 185825

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 7     acccattaccatttccactcccacttcc 34
             ||||| ||||||||||| ||||||||||
Sbjct: 81244 acccagtaccatttccattcccacttcc 81271
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   cgcccagcgccaccaccgcg 144
             ||||||||||||||||||||
Sbjct: 81715 cgcccagcgccaccaccgcg 81734
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>tpg|BK002805.1| TPA: TPA_inf: Drosophila melanogaster HDC15392 (HDC15392) gene,
           complete cds
          Length = 338

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  cattaccatttccactccca 29
           ||||||||||||||||||||
Sbjct: 155 cattaccatttccactccca 136
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    tccgcgagctcgtcgcgcag 273
              ||||||||||||||||||||
Sbjct: 386470 tccgcgagctcgtcgcgcag 386489
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      ccgcggcggcggcggaagcc 99
               ||||||||||||||||||||
Sbjct: 7419847 ccgcggcggcggcggaagcc 7419828
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 75       ggcaaccgcggcggcggcgg 94
                ||||||||||||||||||||
Sbjct: 23122792 ggcaaccgcggcggcggcgg 23122773
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 75       ggcaaccgcggcggcggcgg 94
                ||||||||||||||||||||
Sbjct: 29461048 ggcaaccgcggcggcggcgg 29461067
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>gb|AC008366.3|AC008366 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone
             BACR13M04, complete sequence
          Length = 172282

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    cattaccatttccactccca 29
             ||||||||||||||||||||
Sbjct: 52935 cattaccatttccactccca 52916
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>gb|AC008204.9|AC008204 Drosophila melanogaster, chromosome 3R, region 95E-95F, BAC clone
              BACR04E17, complete sequence
          Length = 199016

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     cattaccatttccactccca 29
              ||||||||||||||||||||
Sbjct: 179165 cattaccatttccactccca 179146
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>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 308     acagggagatactgatggaggagg 331
               ||||||||||||| ||||||||||
Sbjct: 1512149 acagggagatacttatggaggagg 1512126
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>gb|AE009686.1| Brucella melitensis 16M chromosome II, section 48 of 107 of the
            complete sequence
          Length = 10687

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   accgcggcggcggcggaagc 98
            ||||||||||||||||||||
Sbjct: 3464 accgcggcggcggcggaagc 3445
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>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0621D05
          Length = 180250

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     ggcaaccgcggcggcggcgg 94
              ||||||||||||||||||||
Sbjct: 171929 ggcaaccgcggcggcggcgg 171948
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>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     accgcggcggcggcggaagc 98
              ||||||||||||||||||||
Sbjct: 445886 accgcggcggcggcggaagc 445867
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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0655A07
          Length = 172473

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    ggcaaccgcggcggcggcgg 94
             ||||||||||||||||||||
Sbjct: 25554 ggcaaccgcggcggcggcgg 25573
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>dbj|AK100915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D21,
          full insert sequence
          Length = 773

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 75 ggcaaccgcggcggcggcgg 94
          ||||||||||||||||||||
Sbjct: 75 ggcaaccgcggcggcggcgg 94
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>dbj|AK069189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004N19,
          full insert sequence
          Length = 1343

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 75 ggcaaccgcggcggcggcgg 94
          ||||||||||||||||||||
Sbjct: 41 ggcaaccgcggcggcggcgg 22
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>gb|AE003747.3| Drosophila melanogaster chromosome 3R, section 85 of 118 of the complete
              sequence
          Length = 206741

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     cattaccatttccactccca 29
              ||||||||||||||||||||
Sbjct: 179421 cattaccatttccactccca 179402
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>emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chromosome 7, complete
             sequence
          Length = 152730

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   ggaggataaggtgaaggggg 346
             ||||||||||||||||||||
Sbjct: 53962 ggaggataaggtgaaggggg 53943
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>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the complete
              sequence
          Length = 287988

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 7      acccattaccatttccactcccacttcc 34
              ||||| ||||||||||| ||||||||||
Sbjct: 189045 acccagtaccatttccattcccacttcc 189072
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>gb|U82397.1|RSU82397 Rhodobacter sphaeroides sigma-32 homolog (rpoH) gene, complete cds
          Length = 1386

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  ccgcggcggcggcggaagcc 99
           ||||||||||||||||||||
Sbjct: 103 ccgcggcggcggcggaagcc 122
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 75       ggcaaccgcggcggcggcgg 94
                ||||||||||||||||||||
Sbjct: 23432702 ggcaaccgcggcggcggcgg 23432683
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      ccgcggcggcggcggaagcc 99
               ||||||||||||||||||||
Sbjct: 7419726 ccgcggcggcggcggaagcc 7419707
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>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 98782

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   ccgcggcggcggcggaagcc 99
            ||||||||||||||||||||
Sbjct: 9523 ccgcggcggcggcggaagcc 9504
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>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence,
              strain 2308
          Length = 1156948

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     accgcggcggcggcggaagc 98
              ||||||||||||||||||||
Sbjct: 445899 accgcggcggcggcggaagc 445880


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,704,465
Number of Sequences: 3902068
Number of extensions: 3704465
Number of successful extensions: 116826
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115095
Number of HSP's gapped (non-prelim): 1724
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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