ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_472289.1| Oryza sativa (japonica cultivar-group), predic... 200 3e-48
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
3emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 200 3e-48
4gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, comp... 44 0.44
5gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, comp... 44 0.44
6ref|XM_512922.1| PREDICTED: Pan troglodytes similar to NALP5 (LO... 42 1.7
7gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome ... 42 1.7
8ref|NM_176811.2| Homo sapiens NACHT, leucine rich repeat and PYD... 42 1.7
9tpg|BK001109.1| TPA: TPA_inf: Homo sapiens NOD16 (NOD16) mRNA, c... 42 1.7
10gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, c... 42 1.7
11gb|AY154463.1| Homo sapiens NALP8 (NALP8) mRNA, complete cds 42 1.7
12gb|AC012150.16|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell... 42 1.7
13gb|AC011470.5|AC011470 Homo sapiens chromosome 19 clone CTC-490M... 42 1.7
14gb|AC135290.5| Mus musculus BAC clone RP23-58D13 from 18, comple... 42 1.7
15ref|XM_513067.1| PREDICTED: Pan troglodytes similar to putative ... 40 6.8
16ref|NM_015609.1| Homo sapiens chromosome 1 open reading frame 14... 40 6.8
17gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, compl... 40 6.8
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.8
19gb|AC132594.3| Mus musculus BAC clone RP24-222P6 from chromosome... 40 6.8
20gb|AC126680.4| Mus musculus BAC clone RP24-347B21 from chromosom... 40 6.8
21gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, compl... 40 6.8
22gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, co... 40 6.8
23ref|XM_846908.1| PREDICTED: Canis familiaris similar to putative... 40 6.8
24ref|XM_859680.1| PREDICTED: Canis familiaris similar to putative... 40 6.8
25gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, comp... 40 6.8
26gb|BC039981.1| Mus musculus renal tumor antigen, mRNA (cDNA clon... 40 6.8
27emb|AL592446.4| Human DNA sequence from clone RP11-291B6 on chro... 40 6.8
28emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on ch... 40 6.8
29gb|AC024886.20| Homo sapiens 3 BAC RP11-25K24 (Roswell Park Canc... 40 6.8
30emb|Z74149.1|SCYDL101C S.cerevisiae chromosome IV reading frame ... 40 6.8
31emb|X95644.1|SCCHRIVLA S.cerevisiae DNA fragment of 38.5kb from ... 40 6.8
32gb|BC023988.1| Homo sapiens chromosome 1 open reading frame 144,... 40 6.8
33gb|BC010631.1| Homo sapiens chromosome 1 open reading frame 144,... 40 6.8
34emb|CR859294.1| Pongo pygmaeus mRNA; cDNA DKFZp468H135 (from clo... 40 6.8
35emb|CR857727.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2135 (from cl... 40 6.8
36emb|CR615655.1| full-length cDNA clone CS0DI033YE02 of Placenta ... 40 6.8
37emb|AJ616216.2| Takifugu rubripes ifng gene for interferon gamma... 40 6.8
38dbj|AB097046.1| Homo sapiens mRNA for putative MAPK activating p... 40 6.8
39dbj|AB097045.1| Homo sapiens mRNA for putative MAPK activating p... 40 6.8
40dbj|AB097044.1| Homo sapiens mRNA for putative MAPK activating p... 40 6.8
41dbj|AB097043.1| Homo sapiens mRNA for putative MAPK activating p... 40 6.8
42dbj|AB097042.1| Homo sapiens mRNA for putative MAPK activating p... 40 6.8
43emb|CR626328.1| full-length cDNA clone CS0DL006YG15 of B cells (... 40 6.8
44emb|CR624498.1| full-length cDNA clone CS0DI026YO19 of Placenta ... 40 6.8
45emb|CR619544.1| full-length cDNA clone CS0DE004YJ20 of Placenta ... 40 6.8
46emb|CR619226.1| full-length cDNA clone CS0DC012YM23 of Neuroblas... 40 6.8
47emb|CR619138.1| full-length cDNA clone CS0DI006YM02 of Placenta ... 40 6.8
48emb|CR616707.1| full-length cDNA clone CS0DI005YP09 of Placenta ... 40 6.8
49emb|CR614958.1| full-length cDNA clone CS0DI024YM18 of Placenta ... 40 6.8
50emb|CR602743.1| full-length cDNA clone CS0DC024YB21 of Neuroblas... 40 6.8
51emb|CR598986.1| full-length cDNA clone CS0DI024YN19 of Placenta ... 40 6.8
52emb|CR593854.1| full-length cDNA clone CS0DI025YD12 of Placenta ... 40 6.8
53emb|BX539324.15| Zebrafish DNA sequence from clone DKEY-225G6 in... 40 6.8
54gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome... 40 6.8
55gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Canc... 40 6.8
56dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
57gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, comple... 40 6.8
58gb|AC025423.32| Homo sapiens 12 BAC RP11-611O2 (Roswell Park Can... 40 6.8
59gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
60dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 6.8
61emb|AJ295987.1|HSA295987 Homo sapiens mRNA for hypothetical prot... 40 6.8
62emb|BX004800.12| Zebrafish DNA sequence from clone DKEY-18F22, c... 40 6.8
63gb|BC065538.1| Homo sapiens chromosome 1 open reading frame 144,... 40 6.8
64dbj|AP001032.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.8
65emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chro... 40 6.8
66emb|AL050028.1|HSM800362 Homo sapiens mRNA; cDNA DKFZp566C0424 (... 40 6.8
67gb|L25548.1|YSCDUN1A Saccharomyces cerevisiae protein kinase (Du... 40 6.8

>ref|XM_472289.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2190

 Score =  200 bits (101), Expect = 3e-48
 Identities = 191/221 (86%)
 Strand = Plus / Plus

                                                                       
Query: 280 gagagcaagtttcacgcgcgcgacctcaggggtgcacgcaagtatgcggtcaaggcccag 339
           ||||||| ||| ||| |||||||| ||||||| || |||||||| ||| ||||||| |||
Sbjct: 34  gagagcaggttccactcgcgcgacatcaggggcgcgcgcaagtacgcgatcaaggcgcag 93

                                                                       
Query: 340 aatctctgcccatcacttgagggcatatcccagatggcgtccactcttgaagttcatctt 399
           || |||||||| || || ||||| ||||||||||||| ||| || || || |||||||| 
Sbjct: 94  aacctctgcccgtccctcgaggggatatcccagatggtgtcgacgctcgaggttcatctc 153

                                                                       
Query: 400 gcagcggagtctaagattgatggagagagtgactggtaccggatcttgtccctacccgcc 459
           || |||||||| ||||| || |||||||| |||||||||||||||||||| ||  |||||
Sbjct: 154 gccgcggagtccaagatcgacggagagagcgactggtaccggatcttgtctctgaccgcc 213

                                                    
Query: 460 tttgcggatgaagaggatgtgaagaagcagtacaggaagct 500
           |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 214 tttgcggacgaagaggaagtgaagaagcagtacaggaagct 254



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  200 bits (101), Expect = 3e-48
 Identities = 191/221 (86%)
 Strand = Plus / Plus

                                                                            
Query: 280      gagagcaagtttcacgcgcgcgacctcaggggtgcacgcaagtatgcggtcaaggcccag 339
                ||||||| ||| ||| |||||||| ||||||| || |||||||| ||| ||||||| |||
Sbjct: 19141071 gagagcaggttccactcgcgcgacatcaggggcgcgcgcaagtacgcgatcaaggcgcag 19141130

                                                                            
Query: 340      aatctctgcccatcacttgagggcatatcccagatggcgtccactcttgaagttcatctt 399
                || |||||||| || || ||||| ||||||||||||| ||| || || || |||||||| 
Sbjct: 19141131 aacctctgcccgtccctcgaggggatatcccagatggtgtcgacgctcgaggttcatctc 19141190

                                                                            
Query: 400      gcagcggagtctaagattgatggagagagtgactggtaccggatcttgtccctacccgcc 459
                || |||||||| ||||| || |||||||| |||||||||||||||||||| ||  |||||
Sbjct: 19141191 gccgcggagtccaagatcgacggagagagcgactggtaccggatcttgtctctgaccgcc 19141250

                                                         
Query: 460      tttgcggatgaagaggatgtgaagaagcagtacaggaagct 500
                |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 19141251 tttgcggacgaagaggaagtgaagaagcagtacaggaagct 19141291



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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score =  200 bits (101), Expect = 3e-48
 Identities = 191/221 (86%)
 Strand = Plus / Plus

                                                                         
Query: 280   gagagcaagtttcacgcgcgcgacctcaggggtgcacgcaagtatgcggtcaaggcccag 339
             ||||||| ||| ||| |||||||| ||||||| || |||||||| ||| ||||||| |||
Sbjct: 74591 gagagcaggttccactcgcgcgacatcaggggcgcgcgcaagtacgcgatcaaggcgcag 74650

                                                                         
Query: 340   aatctctgcccatcacttgagggcatatcccagatggcgtccactcttgaagttcatctt 399
             || |||||||| || || ||||| ||||||||||||| ||| || || || |||||||| 
Sbjct: 74651 aacctctgcccgtccctcgaggggatatcccagatggtgtcgacgctcgaggttcatctc 74710

                                                                         
Query: 400   gcagcggagtctaagattgatggagagagtgactggtaccggatcttgtccctacccgcc 459
             || |||||||| ||||| || |||||||| |||||||||||||||||||| ||  |||||
Sbjct: 74711 gccgcggagtccaagatcgacggagagagcgactggtaccggatcttgtctctgaccgcc 74770

                                                      
Query: 460   tttgcggatgaagaggatgtgaagaagcagtacaggaagct 500
             |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 74771 tttgcggacgaagaggaagtgaagaagcagtacaggaagct 74811



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>gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, complete sequence
          Length = 214160

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 219    aaaggtggagatgagtgtggag 240
              ||||||||||||||||||||||
Sbjct: 102622 aaaggtggagatgagtgtggag 102601



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>gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, complete sequence
          Length = 171343

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 219   aaaggtggagatgagtgtggag 240
             ||||||||||||||||||||||
Sbjct: 74388 aaaggtggagatgagtgtggag 74409



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>ref|XM_512922.1| PREDICTED: Pan troglodytes similar to NALP5 (LOC456316), mRNA
          Length = 6615

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 181  cattcttgctcaagtccagctgtct 205
            ||||||||||||||||||| |||||
Sbjct: 3103 cattcttgctcaagtccagatgtct 3079



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>gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome 18, complete sequence
          Length = 215826

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 316    cgcaagtatgcggtcaaggcc 336
              |||||||||||||||||||||
Sbjct: 164168 cgcaagtatgcggtcaaggcc 164188



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>ref|NM_176811.2| Homo sapiens NACHT, leucine rich repeat and PYD containing 8 (NALP8),
            mRNA
          Length = 3934

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 181  cattcttgctcaagtccagctgtct 205
            ||||||||||||||||||| |||||
Sbjct: 3045 cattcttgctcaagtccagatgtct 3021



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>tpg|BK001109.1| TPA: TPA_inf: Homo sapiens NOD16 (NOD16) mRNA, complete cds
          Length = 3934

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 181  cattcttgctcaagtccagctgtct 205
            ||||||||||||||||||| |||||
Sbjct: 3045 cattcttgctcaagtccagatgtct 3021



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>gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, complete sequence
          Length = 189230

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   ggtcctgggcttcttcattct 186
             |||||||||||||||||||||
Sbjct: 91580 ggtcctgggcttcttcattct 91560



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>gb|AY154463.1| Homo sapiens NALP8 (NALP8) mRNA, complete cds
          Length = 3090

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 181  cattcttgctcaagtccagctgtct 205
            ||||||||||||||||||| |||||
Sbjct: 2917 cattcttgctcaagtccagatgtct 2893



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>gb|AC012150.16|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 227305

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 480  gaagaagcagtacaggaagct 500
            |||||||||||||||||||||
Sbjct: 9433 gaagaagcagtacaggaagct 9413



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>gb|AC011470.5|AC011470 Homo sapiens chromosome 19 clone CTC-490M10, complete sequence
          Length = 157141

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 181   cattcttgctcaagtccagctgtct 205
             ||||||||||||||||||| |||||
Sbjct: 89432 cattcttgctcaagtccagatgtct 89456



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>gb|AC135290.5| Mus musculus BAC clone RP23-58D13 from 18, complete sequence
          Length = 233915

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 316    cgcaagtatgcggtcaaggcc 336
              |||||||||||||||||||||
Sbjct: 135253 cgcaagtatgcggtcaaggcc 135273



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>ref|XM_513067.1| PREDICTED: Pan troglodytes similar to putative MAPK activating
           protein (LOC456475), mRNA
          Length = 850

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 814 tgctcaagtccagctgtctg 795



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>ref|NM_015609.1| Homo sapiens chromosome 1 open reading frame 144 (C1orf144), mRNA
          Length = 1701

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 539 tgctcaagtccagctgtctg 520



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>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence
          Length = 262048

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    ctgggcttcttcattcttgc 189
              ||||||||||||||||||||
Sbjct: 108871 ctgggcttcttcattcttgc 108852



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    tgaaagcacgaaatactgca 279
              ||||||||||||||||||||
Sbjct: 838372 tgaaagcacgaaatactgca 838391



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>gb|AC132594.3| Mus musculus BAC clone RP24-222P6 from chromosome 7, complete sequence
          Length = 162814

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 67     cctgcgcctcctccagccgatccg 90
              |||||||||||||||||| |||||
Sbjct: 137062 cctgcgcctcctccagcccatccg 137039



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>gb|AC126680.4| Mus musculus BAC clone RP24-347B21 from chromosome 7, complete sequence
          Length = 161973

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    cctgcgcctcctccagccgatccg 90
             |||||||||||||||||| |||||
Sbjct: 73056 cctgcgcctcctccagcccatccg 73033



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>gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, complete sequence
          Length = 182661

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 216    ttcaaaggtggagatgagtgtgga 239
              ||||||| ||||||||||||||||
Sbjct: 172432 ttcaaagctggagatgagtgtgga 172409



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>gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, complete sequence
          Length = 184813

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   tgctcaagtccagctgtctg 206
             ||||||||||||||||||||
Sbjct: 26115 tgctcaagtccagctgtctg 26134



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>ref|XM_846908.1| PREDICTED: Canis familiaris similar to putative MAPK activating
           protein PM20,PM21 isoform 2, transcript variant 1
           (LOC608518), mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 597 tgctcaagtccagctgtctg 578



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>ref|XM_859680.1| PREDICTED: Canis familiaris similar to putative MAPK activating
           protein PM20,PM21 isoform 2, transcript variant 2
           (LOC608518), mRNA
          Length = 1816

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 577 tgctcaagtccagctgtctg 558



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>gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, complete sequence
          Length = 233476

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    ctgggcttcttcattcttgc 189
              ||||||||||||||||||||
Sbjct: 195364 ctgggcttcttcattcttgc 195345



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>gb|BC039981.1| Mus musculus renal tumor antigen, mRNA (cDNA clone IMAGE:4952067),
            complete cds
          Length = 5043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  tgctcaagtccagctgtctg 206
            ||||||||||||||||||||
Sbjct: 2191 tgctcaagtccagctgtctg 2172



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>emb|AL592446.4| Human DNA sequence from clone RP11-291B6 on chromosome 1, complete
            sequence
          Length = 29787

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 466  gatgaagaggatgtgaagaa 485
            ||||||||||||||||||||
Sbjct: 7364 gatgaagaggatgtgaagaa 7345



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>emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on chromosome 1 Contains the
             5' end of a novel gene (KIAA1332), a ribosomal protein L22
             (RPL22) pseudogene, a putative MAPK activating protein
             (DKFZp566C0424), a novel gene (LOC374955) and two CpG
             islands, complete sequence
          Length = 124949

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   tgctcaagtccagctgtctg 206
             ||||||||||||||||||||
Sbjct: 80548 tgctcaagtccagctgtctg 80529



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>gb|AC024886.20| Homo sapiens 3 BAC RP11-25K24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 173270

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 143    cagtgaactcttgttcatttcttg 166
              ||||||| ||||||||||||||||
Sbjct: 112722 cagtgaaatcttgttcatttcttg 112699



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>emb|Z74149.1|SCYDL101C S.cerevisiae chromosome IV reading frame ORF YDL101c
          Length = 1946

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 240 gtacaatatggatgaagctttgaa 263
           ||||||||| ||||||||||||||
Sbjct: 280 gtacaatatagatgaagctttgaa 257



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>emb|X95644.1|SCCHRIVLA S.cerevisiae DNA fragment of 38.5kb from left arm of chromosome IV
          Length = 38516

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 240   gtacaatatggatgaagctttgaa 263
             ||||||||| ||||||||||||||
Sbjct: 18670 gtacaatatagatgaagctttgaa 18647



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>gb|BC023988.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone
           MGC:24215 IMAGE:3825796), complete cds
          Length = 1701

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 539 tgctcaagtccagctgtctg 520



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>gb|BC010631.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone
           IMAGE:3867552), with apparent retained intron
          Length = 3416

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 494 tgctcaagtccagctgtctg 475



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>emb|CR859294.1| Pongo pygmaeus mRNA; cDNA DKFZp468H135 (from clone DKFZp468H135)
          Length = 3458

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 533 tgctcaagtccagctgtctg 514



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>emb|CR857727.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2135 (from clone DKFZp469P2135)
          Length = 1723

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 584 tgctcaagtccagctgtctg 565



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>emb|CR615655.1| full-length cDNA clone CS0DI033YE02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1600

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 501 tgctcaagtccagctgtctg 482



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>emb|AJ616216.2| Takifugu rubripes ifng gene for interferon gamma, exons 1-4
          Length = 3030

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 412  aagattgatggagagagtga 431
            ||||||||||||||||||||
Sbjct: 2150 aagattgatggagagagtga 2169



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>dbj|AB097046.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM22
          Length = 1731

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 572 tgctcaagtccagctgtctg 553



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>dbj|AB097045.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM21
          Length = 904

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 513 tgctcaagtccagctgtctg 494



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>dbj|AB097044.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM20
          Length = 904

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 513 tgctcaagtccagctgtctg 494



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>dbj|AB097043.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM19
          Length = 1585

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 522 tgctcaagtccagctgtctg 503



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>dbj|AB097042.1| Homo sapiens mRNA for putative MAPK activating protein, complete
           cds, clone: PM18
          Length = 1585

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 522 tgctcaagtccagctgtctg 503



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>emb|CR626328.1| full-length cDNA clone CS0DL006YG15 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1663

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 556 tgctcaagtccagctgtctg 537



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>emb|CR624498.1| full-length cDNA clone CS0DI026YO19 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1630

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 502 tgctcaagtccagctgtctg 483



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>emb|CR619544.1| full-length cDNA clone CS0DE004YJ20 of Placenta of Homo sapiens
           (human)
          Length = 1622

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 505 tgctcaagtccagctgtctg 486



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>emb|CR619226.1| full-length cDNA clone CS0DC012YM23 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 517 tgctcaagtccagctgtctg 498



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>emb|CR619138.1| full-length cDNA clone CS0DI006YM02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1575

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 504 tgctcaagtccagctgtctg 485



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>emb|CR616707.1| full-length cDNA clone CS0DI005YP09 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1605

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 504 tgctcaagtccagctgtctg 485



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>emb|CR614958.1| full-length cDNA clone CS0DI024YM18 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 906

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 557 tgctcaagtccagctgtctg 538



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>emb|CR602743.1| full-length cDNA clone CS0DC024YB21 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1663

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 567 tgctcaagtccagctgtctg 548



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>emb|CR598986.1| full-length cDNA clone CS0DI024YN19 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1625

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 520 tgctcaagtccagctgtctg 501



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>emb|CR593854.1| full-length cDNA clone CS0DI025YD12 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1616

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 517 tgctcaagtccagctgtctg 498



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>emb|BX539324.15| Zebrafish DNA sequence from clone DKEY-225G6 in linkage group 10,
              complete sequence
          Length = 178074

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    atgaagaggatgtgaagaag 486
              ||||||||||||||||||||
Sbjct: 131559 atgaagaggatgtgaagaag 131578



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>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence
          Length = 197420

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    cttgttcatttcttggtcct 171
              ||||||||||||||||||||
Sbjct: 164271 cttgttcatttcttggtcct 164252



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>gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190805

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 216    ttcaaaggtggagatgagtgtgga 239
              ||||||| ||||||||||||||||
Sbjct: 105042 ttcaaagctggagatgagtgtgga 105019



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    tgaaagcacgaaatactgca 279
              ||||||||||||||||||||
Sbjct: 838370 tgaaagcacgaaatactgca 838389



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>gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, complete sequence
          Length = 194508

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   atggagttctcataaccctc 119
             ||||||||||||||||||||
Sbjct: 16862 atggagttctcataaccctc 16843



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>gb|AC025423.32| Homo sapiens 12 BAC RP11-611O2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 150579

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    tgctcaagtccagctgtctg 206
              ||||||||||||||||||||
Sbjct: 144570 tgctcaagtccagctgtctg 144551



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>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10,
              complete sequence
          Length = 162132

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    tgaaagcacgaaatactgca 279
              ||||||||||||||||||||
Sbjct: 133917 tgaaagcacgaaatactgca 133936



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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 464     cggatgaagaggatgtgaag 483
               ||||||||||||||||||||
Sbjct: 2539253 cggatgaagaggatgtgaag 2539234



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>emb|AJ295987.1|HSA295987 Homo sapiens mRNA for hypothetical protein (ORF1), clone
           Telethon(Italy_B41)_Strait01448_FL406
          Length = 3429

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 518 tgctcaagtccagctgtctg 499



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>emb|BX004800.12| Zebrafish DNA sequence from clone DKEY-18F22, complete sequence
          Length = 269096

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    atgaagaggatgtgaagaag 486
              ||||||||||||||||||||
Sbjct: 249757 atgaagaggatgtgaagaag 249776



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>gb|BC065538.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone
           MGC:70432 IMAGE:6053254), complete cds
          Length = 954

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 519 tgctcaagtccagctgtctg 500



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>dbj|AP001032.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874N19, complete
              sequence
          Length = 165113

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    actgtgcagtgaactcttgt 156
              ||||||||||||||||||||
Sbjct: 116096 actgtgcagtgaactcttgt 116077



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>emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chromosome 4, complete
              sequence
          Length = 249534

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    atgaagaggatgtgaagaag 486
              ||||||||||||||||||||
Sbjct: 230386 atgaagaggatgtgaagaag 230405



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>emb|AL050028.1|HSM800362 Homo sapiens mRNA; cDNA DKFZp566C0424 (from clone DKFZp566C0424);
           partial cds
          Length = 1651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 tgctcaagtccagctgtctg 206
           ||||||||||||||||||||
Sbjct: 518 tgctcaagtccagctgtctg 499



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>gb|L25548.1|YSCDUN1A Saccharomyces cerevisiae protein kinase (Dun1) gene, complete cds
          Length = 2000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 240  gtacaatatggatgaagctttgaa 263
            ||||||||| ||||||||||||||
Sbjct: 1638 gtacaatatagatgaagctttgaa 1661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,188,992
Number of Sequences: 3902068
Number of extensions: 4188992
Number of successful extensions: 81413
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81232
Number of HSP's gapped (non-prelim): 181
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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