Clone Name | bastl07d08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472289.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2190 Score = 200 bits (101), Expect = 3e-48 Identities = 191/221 (86%) Strand = Plus / Plus Query: 280 gagagcaagtttcacgcgcgcgacctcaggggtgcacgcaagtatgcggtcaaggcccag 339 ||||||| ||| ||| |||||||| ||||||| || |||||||| ||| ||||||| ||| Sbjct: 34 gagagcaggttccactcgcgcgacatcaggggcgcgcgcaagtacgcgatcaaggcgcag 93 Query: 340 aatctctgcccatcacttgagggcatatcccagatggcgtccactcttgaagttcatctt 399 || |||||||| || || ||||| ||||||||||||| ||| || || || |||||||| Sbjct: 94 aacctctgcccgtccctcgaggggatatcccagatggtgtcgacgctcgaggttcatctc 153 Query: 400 gcagcggagtctaagattgatggagagagtgactggtaccggatcttgtccctacccgcc 459 || |||||||| ||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 154 gccgcggagtccaagatcgacggagagagcgactggtaccggatcttgtctctgaccgcc 213 Query: 460 tttgcggatgaagaggatgtgaagaagcagtacaggaagct 500 |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 214 tttgcggacgaagaggaagtgaagaagcagtacaggaagct 254
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 200 bits (101), Expect = 3e-48 Identities = 191/221 (86%) Strand = Plus / Plus Query: 280 gagagcaagtttcacgcgcgcgacctcaggggtgcacgcaagtatgcggtcaaggcccag 339 ||||||| ||| ||| |||||||| ||||||| || |||||||| ||| ||||||| ||| Sbjct: 19141071 gagagcaggttccactcgcgcgacatcaggggcgcgcgcaagtacgcgatcaaggcgcag 19141130 Query: 340 aatctctgcccatcacttgagggcatatcccagatggcgtccactcttgaagttcatctt 399 || |||||||| || || ||||| ||||||||||||| ||| || || || |||||||| Sbjct: 19141131 aacctctgcccgtccctcgaggggatatcccagatggtgtcgacgctcgaggttcatctc 19141190 Query: 400 gcagcggagtctaagattgatggagagagtgactggtaccggatcttgtccctacccgcc 459 || |||||||| ||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 19141191 gccgcggagtccaagatcgacggagagagcgactggtaccggatcttgtctctgaccgcc 19141250 Query: 460 tttgcggatgaagaggatgtgaagaagcagtacaggaagct 500 |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 19141251 tttgcggacgaagaggaagtgaagaagcagtacaggaagct 19141291
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 200 bits (101), Expect = 3e-48 Identities = 191/221 (86%) Strand = Plus / Plus Query: 280 gagagcaagtttcacgcgcgcgacctcaggggtgcacgcaagtatgcggtcaaggcccag 339 ||||||| ||| ||| |||||||| ||||||| || |||||||| ||| ||||||| ||| Sbjct: 74591 gagagcaggttccactcgcgcgacatcaggggcgcgcgcaagtacgcgatcaaggcgcag 74650 Query: 340 aatctctgcccatcacttgagggcatatcccagatggcgtccactcttgaagttcatctt 399 || |||||||| || || ||||| ||||||||||||| ||| || || || |||||||| Sbjct: 74651 aacctctgcccgtccctcgaggggatatcccagatggtgtcgacgctcgaggttcatctc 74710 Query: 400 gcagcggagtctaagattgatggagagagtgactggtaccggatcttgtccctacccgcc 459 || |||||||| ||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 74711 gccgcggagtccaagatcgacggagagagcgactggtaccggatcttgtctctgaccgcc 74770 Query: 460 tttgcggatgaagaggatgtgaagaagcagtacaggaagct 500 |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 74771 tttgcggacgaagaggaagtgaagaagcagtacaggaagct 74811
>gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, complete sequence Length = 214160 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 aaaggtggagatgagtgtggag 240 |||||||||||||||||||||| Sbjct: 102622 aaaggtggagatgagtgtggag 102601
>gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, complete sequence Length = 171343 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 219 aaaggtggagatgagtgtggag 240 |||||||||||||||||||||| Sbjct: 74388 aaaggtggagatgagtgtggag 74409
>ref|XM_512922.1| PREDICTED: Pan troglodytes similar to NALP5 (LOC456316), mRNA Length = 6615 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 cattcttgctcaagtccagctgtct 205 ||||||||||||||||||| ||||| Sbjct: 3103 cattcttgctcaagtccagatgtct 3079
>gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome 18, complete sequence Length = 215826 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 cgcaagtatgcggtcaaggcc 336 ||||||||||||||||||||| Sbjct: 164168 cgcaagtatgcggtcaaggcc 164188
>ref|NM_176811.2| Homo sapiens NACHT, leucine rich repeat and PYD containing 8 (NALP8), mRNA Length = 3934 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 cattcttgctcaagtccagctgtct 205 ||||||||||||||||||| ||||| Sbjct: 3045 cattcttgctcaagtccagatgtct 3021
>tpg|BK001109.1| TPA: TPA_inf: Homo sapiens NOD16 (NOD16) mRNA, complete cds Length = 3934 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 cattcttgctcaagtccagctgtct 205 ||||||||||||||||||| ||||| Sbjct: 3045 cattcttgctcaagtccagatgtct 3021
>gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, complete sequence Length = 189230 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ggtcctgggcttcttcattct 186 ||||||||||||||||||||| Sbjct: 91580 ggtcctgggcttcttcattct 91560
>gb|AY154463.1| Homo sapiens NALP8 (NALP8) mRNA, complete cds Length = 3090 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 cattcttgctcaagtccagctgtct 205 ||||||||||||||||||| ||||| Sbjct: 2917 cattcttgctcaagtccagatgtct 2893
>gb|AC012150.16|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 227305 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 gaagaagcagtacaggaagct 500 ||||||||||||||||||||| Sbjct: 9433 gaagaagcagtacaggaagct 9413
>gb|AC011470.5|AC011470 Homo sapiens chromosome 19 clone CTC-490M10, complete sequence Length = 157141 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 cattcttgctcaagtccagctgtct 205 ||||||||||||||||||| ||||| Sbjct: 89432 cattcttgctcaagtccagatgtct 89456
>gb|AC135290.5| Mus musculus BAC clone RP23-58D13 from 18, complete sequence Length = 233915 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 cgcaagtatgcggtcaaggcc 336 ||||||||||||||||||||| Sbjct: 135253 cgcaagtatgcggtcaaggcc 135273
>ref|XM_513067.1| PREDICTED: Pan troglodytes similar to putative MAPK activating protein (LOC456475), mRNA Length = 850 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 814 tgctcaagtccagctgtctg 795
>ref|NM_015609.1| Homo sapiens chromosome 1 open reading frame 144 (C1orf144), mRNA Length = 1701 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 539 tgctcaagtccagctgtctg 520
>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence Length = 262048 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ctgggcttcttcattcttgc 189 |||||||||||||||||||| Sbjct: 108871 ctgggcttcttcattcttgc 108852
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tgaaagcacgaaatactgca 279 |||||||||||||||||||| Sbjct: 838372 tgaaagcacgaaatactgca 838391
>gb|AC132594.3| Mus musculus BAC clone RP24-222P6 from chromosome 7, complete sequence Length = 162814 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 cctgcgcctcctccagccgatccg 90 |||||||||||||||||| ||||| Sbjct: 137062 cctgcgcctcctccagcccatccg 137039
>gb|AC126680.4| Mus musculus BAC clone RP24-347B21 from chromosome 7, complete sequence Length = 161973 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 cctgcgcctcctccagccgatccg 90 |||||||||||||||||| ||||| Sbjct: 73056 cctgcgcctcctccagcccatccg 73033
>gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, complete sequence Length = 182661 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 ttcaaaggtggagatgagtgtgga 239 ||||||| |||||||||||||||| Sbjct: 172432 ttcaaagctggagatgagtgtgga 172409
>gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, complete sequence Length = 184813 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 26115 tgctcaagtccagctgtctg 26134
>ref|XM_846908.1| PREDICTED: Canis familiaris similar to putative MAPK activating protein PM20,PM21 isoform 2, transcript variant 1 (LOC608518), mRNA Length = 1836 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 597 tgctcaagtccagctgtctg 578
>ref|XM_859680.1| PREDICTED: Canis familiaris similar to putative MAPK activating protein PM20,PM21 isoform 2, transcript variant 2 (LOC608518), mRNA Length = 1816 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 577 tgctcaagtccagctgtctg 558
>gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, complete sequence Length = 233476 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ctgggcttcttcattcttgc 189 |||||||||||||||||||| Sbjct: 195364 ctgggcttcttcattcttgc 195345
>gb|BC039981.1| Mus musculus renal tumor antigen, mRNA (cDNA clone IMAGE:4952067), complete cds Length = 5043 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 2191 tgctcaagtccagctgtctg 2172
>emb|AL592446.4| Human DNA sequence from clone RP11-291B6 on chromosome 1, complete sequence Length = 29787 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gatgaagaggatgtgaagaa 485 |||||||||||||||||||| Sbjct: 7364 gatgaagaggatgtgaagaa 7345
>emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on chromosome 1 Contains the 5' end of a novel gene (KIAA1332), a ribosomal protein L22 (RPL22) pseudogene, a putative MAPK activating protein (DKFZp566C0424), a novel gene (LOC374955) and two CpG islands, complete sequence Length = 124949 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 80548 tgctcaagtccagctgtctg 80529
>gb|AC024886.20| Homo sapiens 3 BAC RP11-25K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173270 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 cagtgaactcttgttcatttcttg 166 ||||||| |||||||||||||||| Sbjct: 112722 cagtgaaatcttgttcatttcttg 112699
>emb|Z74149.1|SCYDL101C S.cerevisiae chromosome IV reading frame ORF YDL101c Length = 1946 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 gtacaatatggatgaagctttgaa 263 ||||||||| |||||||||||||| Sbjct: 280 gtacaatatagatgaagctttgaa 257
>emb|X95644.1|SCCHRIVLA S.cerevisiae DNA fragment of 38.5kb from left arm of chromosome IV Length = 38516 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 gtacaatatggatgaagctttgaa 263 ||||||||| |||||||||||||| Sbjct: 18670 gtacaatatagatgaagctttgaa 18647
>gb|BC023988.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone MGC:24215 IMAGE:3825796), complete cds Length = 1701 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 539 tgctcaagtccagctgtctg 520
>gb|BC010631.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone IMAGE:3867552), with apparent retained intron Length = 3416 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 494 tgctcaagtccagctgtctg 475
>emb|CR859294.1| Pongo pygmaeus mRNA; cDNA DKFZp468H135 (from clone DKFZp468H135) Length = 3458 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 533 tgctcaagtccagctgtctg 514
>emb|CR857727.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2135 (from clone DKFZp469P2135) Length = 1723 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 584 tgctcaagtccagctgtctg 565
>emb|CR615655.1| full-length cDNA clone CS0DI033YE02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1600 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 501 tgctcaagtccagctgtctg 482
>emb|AJ616216.2| Takifugu rubripes ifng gene for interferon gamma, exons 1-4 Length = 3030 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 aagattgatggagagagtga 431 |||||||||||||||||||| Sbjct: 2150 aagattgatggagagagtga 2169
>dbj|AB097046.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM22 Length = 1731 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 572 tgctcaagtccagctgtctg 553
>dbj|AB097045.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM21 Length = 904 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 513 tgctcaagtccagctgtctg 494
>dbj|AB097044.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM20 Length = 904 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 513 tgctcaagtccagctgtctg 494
>dbj|AB097043.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM19 Length = 1585 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 522 tgctcaagtccagctgtctg 503
>dbj|AB097042.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM18 Length = 1585 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 522 tgctcaagtccagctgtctg 503
>emb|CR626328.1| full-length cDNA clone CS0DL006YG15 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1663 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 556 tgctcaagtccagctgtctg 537
>emb|CR624498.1| full-length cDNA clone CS0DI026YO19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1630 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 502 tgctcaagtccagctgtctg 483
>emb|CR619544.1| full-length cDNA clone CS0DE004YJ20 of Placenta of Homo sapiens (human) Length = 1622 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 505 tgctcaagtccagctgtctg 486
>emb|CR619226.1| full-length cDNA clone CS0DC012YM23 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1594 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 517 tgctcaagtccagctgtctg 498
>emb|CR619138.1| full-length cDNA clone CS0DI006YM02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1575 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 504 tgctcaagtccagctgtctg 485
>emb|CR616707.1| full-length cDNA clone CS0DI005YP09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1605 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 504 tgctcaagtccagctgtctg 485
>emb|CR614958.1| full-length cDNA clone CS0DI024YM18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 906 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 557 tgctcaagtccagctgtctg 538
>emb|CR602743.1| full-length cDNA clone CS0DC024YB21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1663 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 567 tgctcaagtccagctgtctg 548
>emb|CR598986.1| full-length cDNA clone CS0DI024YN19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1625 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 520 tgctcaagtccagctgtctg 501
>emb|CR593854.1| full-length cDNA clone CS0DI025YD12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1616 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 517 tgctcaagtccagctgtctg 498
>emb|BX539324.15| Zebrafish DNA sequence from clone DKEY-225G6 in linkage group 10, complete sequence Length = 178074 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 atgaagaggatgtgaagaag 486 |||||||||||||||||||| Sbjct: 131559 atgaagaggatgtgaagaag 131578
>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence Length = 197420 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttgttcatttcttggtcct 171 |||||||||||||||||||| Sbjct: 164271 cttgttcatttcttggtcct 164252
>gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190805 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 ttcaaaggtggagatgagtgtgga 239 ||||||| |||||||||||||||| Sbjct: 105042 ttcaaagctggagatgagtgtgga 105019
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tgaaagcacgaaatactgca 279 |||||||||||||||||||| Sbjct: 838370 tgaaagcacgaaatactgca 838389
>gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, complete sequence Length = 194508 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 atggagttctcataaccctc 119 |||||||||||||||||||| Sbjct: 16862 atggagttctcataaccctc 16843
>gb|AC025423.32| Homo sapiens 12 BAC RP11-611O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150579 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 144570 tgctcaagtccagctgtctg 144551
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tgaaagcacgaaatactgca 279 |||||||||||||||||||| Sbjct: 133917 tgaaagcacgaaatactgca 133936
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 cggatgaagaggatgtgaag 483 |||||||||||||||||||| Sbjct: 2539253 cggatgaagaggatgtgaag 2539234
>emb|AJ295987.1|HSA295987 Homo sapiens mRNA for hypothetical protein (ORF1), clone Telethon(Italy_B41)_Strait01448_FL406 Length = 3429 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 518 tgctcaagtccagctgtctg 499
>emb|BX004800.12| Zebrafish DNA sequence from clone DKEY-18F22, complete sequence Length = 269096 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 atgaagaggatgtgaagaag 486 |||||||||||||||||||| Sbjct: 249757 atgaagaggatgtgaagaag 249776
>gb|BC065538.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone MGC:70432 IMAGE:6053254), complete cds Length = 954 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 519 tgctcaagtccagctgtctg 500
>dbj|AP001032.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874N19, complete sequence Length = 165113 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 actgtgcagtgaactcttgt 156 |||||||||||||||||||| Sbjct: 116096 actgtgcagtgaactcttgt 116077
>emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chromosome 4, complete sequence Length = 249534 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 atgaagaggatgtgaagaag 486 |||||||||||||||||||| Sbjct: 230386 atgaagaggatgtgaagaag 230405
>emb|AL050028.1|HSM800362 Homo sapiens mRNA; cDNA DKFZp566C0424 (from clone DKFZp566C0424); partial cds Length = 1651 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgctcaagtccagctgtctg 206 |||||||||||||||||||| Sbjct: 518 tgctcaagtccagctgtctg 499
>gb|L25548.1|YSCDUN1A Saccharomyces cerevisiae protein kinase (Dun1) gene, complete cds Length = 2000 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gtacaatatggatgaagctttgaa 263 ||||||||| |||||||||||||| Sbjct: 1638 gtacaatatagatgaagctttgaa 1661 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,188,992 Number of Sequences: 3902068 Number of extensions: 4188992 Number of successful extensions: 81413 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81232 Number of HSP's gapped (non-prelim): 181 length of query: 502 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 480 effective length of database: 17,147,199,772 effective search space: 8230655890560 effective search space used: 8230655890560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)