ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (U... 30 1.9
2KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-ass... 28 5.4
3KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-ass... 28 5.4
4KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-ass... 28 9.3

>KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin)|
          Length = 182

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = -2

Query: 110 CSAGCAWECAFVDWIGVRGAARVCSSSCCWAFLCC 6
           CS GC   C      G       CSSSCC    CC
Sbjct: 6   CSGGCGSSCG-----GCGSRCGGCSSSCCVPVCCC 35



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>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein|
           5.6) (Ultrahigh sulfur keratin-associated protein 5.6)
          Length = 129

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -2

Query: 110 CSAGCAWECAFVDWIGVRGAARVCSSSCCWAFLCC 6
           CS GC   C      G       C SSCC    CC
Sbjct: 6   CSGGCGSGCG-----GCGSGCGGCGSSCCVPICCC 35



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>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein|
           5.8) (Ultrahigh sulfur keratin-associated protein 5.8)
           (Keratin, ultra high-sulfur matrix protein B) (UHS
           keratin B) (UHS KerB)
          Length = 187

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -2

Query: 110 CSAGCAWECAFVDWIGVRGAARVCSSSCCWAFLCC 6
           CS GC   C      G       C SSCC    CC
Sbjct: 6   CSGGCGSGCG-----GCGSGCGGCGSSCCVPICCC 35



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>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein|
           5.9) (Ultrahigh sulfur keratin-associated protein 5.9)
           (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra
           high-sulfur matrix protein A) (UHS keratin A) (UHS KerA)
          Length = 169

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
 Frame = -2

Query: 110 CSAGCAWECAFVDW-IGVRGAA-RVCSSSCCWAFLCC 6
           CS GC   C   D   G  G+  R C  SCC    CC
Sbjct: 6   CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCC 42


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.119    0.341 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,471,704
Number of Sequences: 219361
Number of extensions: 117802
Number of successful extensions: 594
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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