ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX914222.9| Zebrafish DNA sequence from clone DKEYP-108A2 in... 44 0.32
2gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, com... 44 0.32
3gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p... 44 0.32
4gb|AF271405.5| Homo sapiens chromosome 8 clone SCb-554J4 map p21... 44 0.32
5gb|AF217759.5| Homo sapiens chromosome 8 clone GS1-45G16 map p21... 44 0.32
6gb|AC015922.17| Homo sapiens chromosome 17, clone CTD-3157E16, c... 44 0.32
7emb|BX276108.6| Zebrafish DNA sequence from clone CH211-265M17 i... 44 0.32
8gb|AC104997.4| Homo sapiens chromosome 8, clone RP11-1149M3, com... 44 0.32
9ref|XM_227066.3| PREDICTED: Rattus norvegicus arylsulfatase E (c... 44 0.32
10tpe|BN000737.1| TPA: TPA_inf: Rattus norvegicus mRNA for arylsul... 44 0.32
11gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Ho... 42 1.3
12gb|AC023286.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 1.3
13gb|AC122867.4| Mus musculus BAC clone RP23-146P6 from 8, complet... 42 1.3
14gb|AC126365.5| Homo sapiens chromosome 17, clone RP11-283C24, co... 42 1.3
15emb|AL772233.6| Mouse DNA sequence from clone RP23-432I13 on chr... 42 1.3
16gb|AC087499.12| Homo sapiens chromosome 17, clone RP11-218E15, c... 42 1.3
17emb|AJ006033.1|MMU6033 Mus musculus ctsk gene 42 1.3
18gb|AC133961.3| Homo sapiens BAC clone RP13-494C23 from 4, comple... 42 1.3
19emb|AL354046.5|HS121M24 Homo sapiens chromosome 17 from PAC RPC... 42 1.3
20gb|AC092203.16| Mus musculus strain C57BL/6J chromosome 3 clone ... 42 1.3
21gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, comple... 42 1.3
22emb|AJ009615.3|HSAJ9615 Homo sapiens chromosome 17 sequence from... 42 1.3
23ref|XM_467316.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.9
24gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 4.9
25gb|AC151803.1| Solanum demissum chromosome 5 BAC PGEC979H09 geno... 40 4.9
26gb|AC008140.11| Drosophila melanogaster clone BACR15J23, complet... 40 4.9
27gb|AC009219.7| Drosophila melanogaster clone BACR32N16, complete... 40 4.9
28gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosom... 40 4.9
29gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, comp... 40 4.9
30gb|AC138682.14| Mus musculus chromosome 5, clone RP23-34L23, com... 40 4.9
31gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome ... 40 4.9
32gb|AC153564.6| Mus musculus 10 BAC RP23-39C23 (Roswell Park Canc... 40 4.9
33emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 4.9
34gb|AC023484.5| Homo sapiens chromosome 3 clone RP11-454F24 map 3... 40 4.9
35gb|AC024167.6| Homo sapiens chromosome 3 clone RP11-453F3 map 3p... 40 4.9
36gb|AC154906.3| Mus musculus BAC clone RP23-344H23 from chromosom... 40 4.9
37emb|AL590731.12| Human DNA sequence from clone RP11-149M6 on chr... 40 4.9
38gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.9
39emb|AL359710.15| Human DNA sequence from clone RP11-30L7 on chro... 40 4.9
40emb|AL157709.17| Human DNA sequence from clone RP11-164C1 on chr... 40 4.9
41gb|AC004106.1| Homo sapiens Xp22 BAC GSHB-45N23 (Genome Systems ... 40 4.9
42gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence 40 4.9
43emb|AL033397.7|HS27K12 Human DNA sequence from clone RP1-27K12 o... 40 4.9
44emb|BX072554.8| Zebrafish DNA sequence from clone DKEY-61M24 in ... 40 4.9
45gb|AC114297.2| Homo sapiens chromosome 5 clone RP11-124B7, compl... 40 4.9
46gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, comp... 40 4.9
47gb|AC097358.2| Homo sapiens chromosome 3 clone RP11-157F20, comp... 40 4.9
48gb|AC084758.3| Homo sapiens chromosome 15 clone RP11-348A14 map ... 40 4.9
49gb|AF473844.1| Rattus norvegicus vitamin A-deficient testicular ... 40 4.9
50gb|AC015864.5| Homo sapiens chromosome 18, clone RP11-54A1, comp... 40 4.9
51gb|AC092295.2| Homo sapiens chromosome 19 clone CTD-2630F21, com... 40 4.9
52gb|AC092050.3| Homo sapiens chromosome 3 clone RP11-263I16, comp... 40 4.9
53dbj|AK166518.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cD... 40 4.9
54dbj|AK051231.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 4.9
55tpg|BK001671.1| TPA: TPA_exp: Homo sapiens Ras-related small GTP... 40 4.9
56gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 4.9
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
58gb|AC022108.4|AC022108 Homo sapiens chromosome 5 clone CTC-426B1... 40 4.9
59gb|AC127460.2| Homo sapiens chromosome 5 clone RP11-689B23, comp... 40 4.9
60gb|AC023137.5| Homo sapiens BAC clone RP11-513P11 from 2, comple... 40 4.9
61gb|AC023355.5|AC023355 Homo sapiens chromosome 15 clone RP11-154... 40 4.9
62gb|AC019046.4|AC019046 Homo sapiens BAC clone RP11-71D23 from 2,... 40 4.9
63gb|AC084473.1|CBRG01A11 Caenorhabditis briggsae cosmid G01A11, c... 40 4.9
64gb|AC113390.3| Homo sapiens chromosome 5 clone RP11-360C3, compl... 40 4.9
65gb|AC009756.9|AC009756 Homo sapiens, clone RP11-45P2, complete s... 40 4.9
66dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
67dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
68emb|AL807810.19| Mouse DNA sequence from clone RP23-186F3 on chr... 40 4.9
69dbj|AK100709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
70gb|AC090673.5| Homo sapiens 12 BAC RP11-366L20 (Roswell Park Can... 40 4.9
71gb|AF055300.1|AF055300 Coffea arabica 11S storage protein gene, ... 40 4.9
72gb|AE003688.3| Drosophila melanogaster chromosome 3R, section 26... 40 4.9
73emb|CT010570.17| Mouse DNA sequence from clone RP23-119O14 on ch... 40 4.9
74dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 4.9
75gb|AC171502.2| Mus musculus BAC clone RP23-242G4 from chromosome... 40 4.9
76emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chr... 40 4.9
77gb|AC121834.4| Mus musculus BAC clone RP24-72F20 from chromosome... 40 4.9
78dbj|AP000348.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 40 4.9
79dbj|AP001169.1| Homo sapiens genomic DNA, chromosome 18q21, dele... 40 4.9 
>emb|BX914222.9| Zebrafish DNA sequence from clone DKEYP-108A2 in linkage group 11,
             complete sequence
          Length = 134368

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 53    caaaagaaaagagaaaagaaca 74
             ||||||||||||||||||||||
Sbjct: 81909 caaaagaaaagagaaaagaaca 81930
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>gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, complete sequence
          Length = 197616

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 62    agagaaaagaacacctttctatttcc 87
             |||||||||||||||| |||||||||
Sbjct: 50869 agagaaaagaacacctgtctatttcc 50844
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>gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p21-p11, complete
           sequence
          Length = 213611

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 62  agagaaaagaacacctttctatttcc 87
           |||||||||||||||| |||||||||
Sbjct: 160 agagaaaagaacacctgtctatttcc 135
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>gb|AF271405.5| Homo sapiens chromosome 8 clone SCb-554J4 map p21-p11, complete sequence
          Length = 109761

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 62     agagaaaagaacacctttctatttcc 87
              |||||||||||||||| |||||||||
Sbjct: 103131 agagaaaagaacacctgtctatttcc 103106
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>gb|AF217759.5| Homo sapiens chromosome 8 clone GS1-45G16 map p21-p11, complete
             sequence
          Length = 83359

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 62    agagaaaagaacacctttctatttcc 87
             |||||||||||||||| |||||||||
Sbjct: 77491 agagaaaagaacacctgtctatttcc 77466
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>gb|AC015922.17| Homo sapiens chromosome 17, clone CTD-3157E16, complete sequence
          Length = 166584

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 54    aaaagaaaagagaaaagaacac 75
             ||||||||||||||||||||||
Sbjct: 45557 aaaagaaaagagaaaagaacac 45536
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>emb|BX276108.6| Zebrafish DNA sequence from clone CH211-265M17 in linkage group 24,
             complete sequence
          Length = 144165

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 57    agaaaagagaaaagaacacctttcta 82
             ||||||||||||||||||| ||||||
Sbjct: 33086 agaaaagagaaaagaacacatttcta 33111
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>gb|AC104997.4| Homo sapiens chromosome 8, clone RP11-1149M3, complete sequence
          Length = 144859

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 62    agagaaaagaacacctttctatttcc 87
             |||||||||||||||| |||||||||
Sbjct: 14717 agagaaaagaacacctgtctatttcc 14742
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>ref|XM_227066.3| PREDICTED: Rattus norvegicus arylsulfatase E (chondrodysplasia
           punctata 1) (predicted) (Arse_predicted), mRNA
          Length = 2136

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 308 ggcggggcgggggcgagcgcag 329
           ||||||||||||||||||||||
Sbjct: 403 ggcggggcgggggcgagcgcag 382
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>tpe|BN000737.1| TPA: TPA_inf: Rattus norvegicus mRNA for arylsulfatase E (Arse
           gene)
          Length = 1836

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 308 ggcggggcgggggcgagcgcag 329
           ||||||||||||||||||||||
Sbjct: 103 ggcggggcgggggcgagcgcag 82
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>gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 197530

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 54   aaaagaaaagagaaaagaaca 74
            |||||||||||||||||||||
Sbjct: 3001 aaaagaaaagagaaaagaaca 2981
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>gb|AC023286.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-86C14, complete
             sequence
          Length = 190251

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    aaaagaaaagagaaaagaaca 74
             |||||||||||||||||||||
Sbjct: 68087 aaaagaaaagagaaaagaaca 68067
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>gb|AC122867.4| Mus musculus BAC clone RP23-146P6 from 8, complete sequence
          Length = 180742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 56     aagaaaagagaaaagaacacc 76
              |||||||||||||||||||||
Sbjct: 115973 aagaaaagagaaaagaacacc 115993
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>gb|AC126365.5| Homo sapiens chromosome 17, clone RP11-283C24, complete sequence
          Length = 194265

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 55   aaagaaaagagaaaagaacac 75
            |||||||||||||||||||||
Sbjct: 5391 aaagaaaagagaaaagaacac 5371
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>emb|AL772233.6| Mouse DNA sequence from clone RP23-432I13 on chromosome 4, complete
             sequence
          Length = 191553

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    ccaaaagaaaagagaaaagaa 72
             |||||||||||||||||||||
Sbjct: 53012 ccaaaagaaaagagaaaagaa 52992
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>gb|AC087499.12| Homo sapiens chromosome 17, clone RP11-218E15, complete sequence
          Length = 195591

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    aaagaaaagagaaaagaacac 75
             |||||||||||||||||||||
Sbjct: 70902 aaagaaaagagaaaagaacac 70882
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>emb|AJ006033.1|MMU6033 Mus musculus ctsk gene
          Length = 11934

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 54   aaaagaaaagagaaaagaaca 74
            |||||||||||||||||||||
Sbjct: 2334 aaaagaaaagagaaaagaaca 2354
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>gb|AC133961.3| Homo sapiens BAC clone RP13-494C23 from 4, complete sequence
          Length = 177787

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 54    aaaagaaaagagaaaagaaca 74
             |||||||||||||||||||||
Sbjct: 91854 aaaagaaaagagaaaagaaca 91874
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>emb|AL354046.5|HS121M24 Homo sapiens chromosome 17 from PAC  RPCI-1 121M24 map 17p11. region
              D17S842-D17S953, complete sequence
          Length = 185415

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 55     aaagaaaagagaaaagaacac 75
              |||||||||||||||||||||
Sbjct: 173739 aaagaaaagagaaaagaacac 173759
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>gb|AC092203.16| Mus musculus strain C57BL/6J chromosome 3 clone rp23-422n18, complete
              sequence
          Length = 188880

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     aaaagaaaagagaaaagaaca 74
              |||||||||||||||||||||
Sbjct: 115835 aaaagaaaagagaaaagaaca 115815
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>gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, complete sequence
          Length = 195904

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 54     aaaagaaaagagaaaagaacacctt 78
              ||||||||||||||||||| |||||
Sbjct: 105877 aaaagaaaagagaaaagaaaacctt 105901
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>emb|AJ009615.3|HSAJ9615 Homo sapiens chromosome 17 sequence from PAC 100G21 region
             D17S842-D17S953 map 17p11.2, complete sequence
          Length = 74517

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 55    aaagaaaagagaaaagaacac 75
             |||||||||||||||||||||
Sbjct: 54277 aaagaaaagagaaaagaacac 54297
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>ref|XM_467316.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3589

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 aagcttctagaagctgccgg 306
           ||||||||||||||||||||
Sbjct: 210 aagcttctagaagctgccgg 229
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 321    cgagcgcagcgcgatctcgg 340
              ||||||||||||||||||||
Sbjct: 966315 cgagcgcagcgcgatctcgg 966334
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>gb|AC151803.1| Solanum demissum chromosome 5 BAC PGEC979H09 genomic sequence, complete
              sequence
          Length = 110954

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aaaagaaaagagaaaagaac 73
              ||||||||||||||||||||
Sbjct: 107584 aaaagaaaagagaaaagaac 107603
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>gb|AC008140.11| Drosophila melanogaster clone BACR15J23, complete sequence
          Length = 140973

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   agcgagaagaaacacattcc 142
             ||||||||||||||||||||
Sbjct: 49246 agcgagaagaaacacattcc 49227
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>gb|AC009219.7| Drosophila melanogaster clone BACR32N16, complete sequence
          Length = 159007

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   agcgagaagaaacacattcc 142
             ||||||||||||||||||||
Sbjct: 58218 agcgagaagaaacacattcc 58237
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>gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosome 12, complete
             sequence
          Length = 157998

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   ggaggcggggcgggggcgag 324
             ||||||||||||||||||||
Sbjct: 73061 ggaggcggggcgggggcgag 73042
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>gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, complete sequence
          Length = 190516

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   ggaggcggggcgggggcgag 324
             ||||||||||||||||||||
Sbjct: 16264 ggaggcggggcgggggcgag 16245
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>gb|AC138682.14| Mus musculus chromosome 5, clone RP23-34L23, complete sequence
          Length = 241585

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     caaaagaaaagagaaaagaa 72
              ||||||||||||||||||||
Sbjct: 232683 caaaagaaaagagaaaagaa 232702
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>gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome 6, complete sequence
          Length = 222892

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   aaaagaaaagagaaaagaac 73
            ||||||||||||||||||||
Sbjct: 2100 aaaagaaaagagaaaagaac 2119
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>gb|AC153564.6| Mus musculus 10 BAC RP23-39C23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 241022

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    aaaagaaaagagaaaagaac 73
             ||||||||||||||||||||
Sbjct: 14881 aaaagaaaagagaaaagaac 14862
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  gcgcagcgcgatctcggccg 343
            ||||||||||||||||||||
Sbjct: 1425 gcgcagcgcgatctcggccg 1406
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>gb|AC023484.5| Homo sapiens chromosome 3 clone RP11-454F24 map 3p, complete sequence
          Length = 192875

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     caaaagaaaagagaaaagaa 72
              ||||||||||||||||||||
Sbjct: 104797 caaaagaaaagagaaaagaa 104816
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>gb|AC024167.6| Homo sapiens chromosome 3 clone RP11-453F3 map 3p, complete sequence
          Length = 188719

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    caaaagaaaagagaaaagaa 72
             ||||||||||||||||||||
Sbjct: 37029 caaaagaaaagagaaaagaa 37048
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>gb|AC154906.3| Mus musculus BAC clone RP23-344H23 from chromosome 12, complete sequence
          Length = 205985

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    ggaggcggggcgggggcgag 324
              ||||||||||||||||||||
Sbjct: 189601 ggaggcggggcgggggcgag 189582
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>emb|AL590731.12| Human DNA sequence from clone RP11-149M6 on chromosome 6, complete
             sequence
          Length = 149389

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ctccaaaagaaaagagaaaa 69
             ||||||||||||||||||||
Sbjct: 66123 ctccaaaagaaaagagaaaa 66104
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 146     gccgcgccggagccgtccgccgtgccgg 173
               ||||||||||||||| |||||| |||||
Sbjct: 2928367 gccgcgccggagccgcccgccgcgccgg 2928340
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>emb|AL359710.15| Human DNA sequence from clone RP11-30L7 on chromosome 9 Contains part of
              a novel gene, the 5' end of the NR4A3 gene for nuclear
              receptor subfamily 4 group A, member 3 and two CpG islands,
              complete sequence
          Length = 174140

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aagaaaagagaaaagaacac 75
              ||||||||||||||||||||
Sbjct: 147725 aagaaaagagaaaagaacac 147744
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>emb|AL157709.17| Human DNA sequence from clone RP11-164C1 on chromosome 10 Contains
            the 5' end of the gene for a novel protein (KIAA0934), a
            novel gene, the 3' end of the gene for a novel protein
            (KIAA0217) and six CpG islands, complete sequence
          Length = 133860

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 349  gccgcgctgaggaggcgccg 368
            ||||||||||||||||||||
Sbjct: 2679 gccgcgctgaggaggcgccg 2660
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>gb|AC004106.1| Homo sapiens Xp22 BAC GSHB-45N23 (Genome Systems Human BAC library)
             complete sequence
          Length = 190482

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    caaaagaaaagagaaaagaa 72
             ||||||||||||||||||||
Sbjct: 90719 caaaagaaaagagaaaagaa 90700
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>gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence
          Length = 164663

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   gcgctgaggaggcgccgggg 371
             ||||||||||||||||||||
Sbjct: 82107 gcgctgaggaggcgccgggg 82126
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>emb|AL033397.7|HS27K12 Human DNA sequence from clone RP1-27K12 on chromosome 6p11.2-12.3
              Contains the GCLC gene for glutamate-cysteine ligase
              catalytic subunit (GCS), a novel gene and one CpG island,
              complete sequence
          Length = 164027

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     caaaagaaaagagaaaagaa 72
              ||||||||||||||||||||
Sbjct: 100174 caaaagaaaagagaaaagaa 100193
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>emb|BX072554.8| Zebrafish DNA sequence from clone DKEY-61M24 in linkage group 7, complete
              sequence
          Length = 190879

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     aaaagagaaaagaacacctt 78
              ||||||||||||||||||||
Sbjct: 161742 aaaagagaaaagaacacctt 161761
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>gb|AC114297.2| Homo sapiens chromosome 5 clone RP11-124B7, complete sequence
          Length = 158406

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     caaaagaaaagagaaaagaa 72
              ||||||||||||||||||||
Sbjct: 113180 caaaagaaaagagaaaagaa 113161
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>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence
          Length = 201917

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     caaaagaaaagagaaaagaa 72
              ||||||||||||||||||||
Sbjct: 163829 caaaagaaaagagaaaagaa 163810
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>gb|AC097358.2| Homo sapiens chromosome 3 clone RP11-157F20, complete sequence
          Length = 154606

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aaaagaaaagagaaaagaac 73
             ||||||||||||||||||||
Sbjct: 80401 aaaagaaaagagaaaagaac 80420
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>gb|AC084758.3| Homo sapiens chromosome 15 clone RP11-348A14 map 15q21.1, complete
             sequence
          Length = 192074

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ctccaaaagaaaagagaaaa 69
             ||||||||||||||||||||
Sbjct: 14156 ctccaaaagaaaagagaaaa 14137
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>gb|AF473844.1| Rattus norvegicus vitamin A-deficient testicular protein 4-like
           mRNA, partial sequence
          Length = 573

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 49  gctccaaaagaaaagagaaaagaa 72
           ||||||||| ||||||||||||||
Sbjct: 379 gctccaaaaaaaaagagaaaagaa 402
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>gb|AC015864.5| Homo sapiens chromosome 18, clone RP11-54A1, complete sequence
          Length = 177410

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aaagaaaagagaaaagaaca 74
             ||||||||||||||||||||
Sbjct: 86709 aaagaaaagagaaaagaaca 86728
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>gb|AC092295.2| Homo sapiens chromosome 19 clone CTD-2630F21, complete sequence
          Length = 165566

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ctccaaaagaaaagagaaaa 69
             ||||||||||||||||||||
Sbjct: 50354 ctccaaaagaaaagagaaaa 50335
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>gb|AC092050.3| Homo sapiens chromosome 3 clone RP11-263I16, complete sequence
          Length = 171934

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    aaaagaaaagagaaaagaac 73
             ||||||||||||||||||||
Sbjct: 43424 aaaagaaaagagaaaagaac 43405
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>dbj|AK166518.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length
            enriched library, clone:G930049I02 product:regulator of
            G-protein signaling 9, full insert sequence
          Length = 5019

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   caaaagaaaagagaaaagaa 72
            ||||||||||||||||||||
Sbjct: 3581 caaaagaaaagagaaaagaa 3562
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>dbj|AK051231.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN
          full-length enriched library, clone:D130019P03
          product:unclassifiable, full insert sequence
          Length = 2935

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 53 caaaagaaaagagaaaagaa 72
          ||||||||||||||||||||
Sbjct: 50 caaaagaaaagagaaaagaa 31
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>tpg|BK001671.1| TPA: TPA_exp: Homo sapiens Ras-related small GTPase (ARHB) gene,
           promoter region and complete cds
          Length = 3500

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  ctccaaaagaaaagagaaaa 69
           ||||||||||||||||||||
Sbjct: 479 ctccaaaagaaaagagaaaa 498
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    gccggcctcgagccagcgca 188
              ||||||||||||||||||||
Sbjct: 684467 gccggcctcgagccagcgca 684486
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 287      aagcttctagaagctgccgg 306
                ||||||||||||||||||||
Sbjct: 28818968 aagcttctagaagctgccgg 28818949
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>gb|AC022108.4|AC022108 Homo sapiens chromosome 5 clone CTC-426B10, complete sequence
          Length = 235599

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     caaaagaaaagagaaaagaa 72
              ||||||||||||||||||||
Sbjct: 220161 caaaagaaaagagaaaagaa 220180
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>gb|AC127460.2| Homo sapiens chromosome 5 clone RP11-689B23, complete sequence
          Length = 115293

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    aaaagaaaagagaaaagaac 73
             ||||||||||||||||||||
Sbjct: 64827 aaaagaaaagagaaaagaac 64808
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>gb|AC023137.5| Homo sapiens BAC clone RP11-513P11 from 2, complete sequence
          Length = 72963

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    ctccaaaagaaaagagaaaa 69
             ||||||||||||||||||||
Sbjct: 36981 ctccaaaagaaaagagaaaa 37000
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>gb|AC023355.5|AC023355 Homo sapiens chromosome 15 clone RP11-154J22 map 15q21.1, complete
             sequence
          Length = 154738

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ctccaaaagaaaagagaaaa 69
             ||||||||||||||||||||
Sbjct: 67819 ctccaaaagaaaagagaaaa 67800
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>gb|AC019046.4|AC019046 Homo sapiens BAC clone RP11-71D23 from 2, complete sequence
          Length = 177703

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     caaaagaaaagagaaaagaa 72
              ||||||||||||||||||||
Sbjct: 104391 caaaagaaaagagaaaagaa 104410
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>gb|AC084473.1|CBRG01A11 Caenorhabditis briggsae cosmid G01A11, complete sequence
          Length = 38822

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ctttctatttcccactttct 95
             ||||||||||||||||||||
Sbjct: 10002 ctttctatttcccactttct 10021
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>gb|AC113390.3| Homo sapiens chromosome 5 clone RP11-360C3, complete sequence
          Length = 196545

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aaaagaaaagagaaaagaac 73
              ||||||||||||||||||||
Sbjct: 175048 aaaagaaaagagaaaagaac 175067
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>gb|AC009756.9|AC009756 Homo sapiens, clone RP11-45P2, complete sequence
          Length = 178624

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ctccaaaagaaaagagaaaa 69
             ||||||||||||||||||||
Sbjct: 56116 ctccaaaagaaaagagaaaa 56097
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>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0459B01
          Length = 163087

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    aagcttctagaagctgccgg 306
              ||||||||||||||||||||
Sbjct: 135541 aagcttctagaagctgccgg 135522
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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1111_E07
          Length = 123613

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   aagcttctagaagctgccgg 306
             ||||||||||||||||||||
Sbjct: 11660 aagcttctagaagctgccgg 11641
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>emb|AL807810.19| Mouse DNA sequence from clone RP23-186F3 on chromosome 4, complete
              sequence
          Length = 165488

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    ggaggcggggcgggggcgag 324
              ||||||||||||||||||||
Sbjct: 109304 ggaggcggggcgggggcgag 109285
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>dbj|AK100709.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115E12, full
           insert sequence
          Length = 3589

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 aagcttctagaagctgccgg 306
           ||||||||||||||||||||
Sbjct: 210 aagcttctagaagctgccgg 229
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>gb|AC090673.5| Homo sapiens 12 BAC RP11-366L20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178755

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     caaaagaaaagagaaaagaa 72
              ||||||||||||||||||||
Sbjct: 154247 caaaagaaaagagaaaagaa 154266
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>gb|AF055300.1|AF055300 Coffea arabica 11S storage protein gene, promoter and 5' untranslated
            region
          Length = 2487

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   ctccaaaagaaaagagaaaa 69
            ||||||||||||||||||||
Sbjct: 1593 ctccaaaagaaaagagaaaa 1574
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>gb|AE003688.3| Drosophila melanogaster chromosome 3R, section 26 of 118 of the complete
              sequence
          Length = 225594

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    agcgagaagaaacacattcc 142
              ||||||||||||||||||||
Sbjct: 190846 agcgagaagaaacacattcc 190865
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>emb|CT010570.17| Mouse DNA sequence from clone RP23-119O14 on chromosome 9, complete
             sequence
          Length = 103145

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    tccaaaagaaaagagaaaag 70
             ||||||||||||||||||||
Sbjct: 31993 tccaaaagaaaagagaaaag 32012
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>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 501020

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     caaaagaaaagagaaaagaa 72
              ||||||||||||||||||||
Sbjct: 168796 caaaagaaaagagaaaagaa 168777
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>gb|AC171502.2| Mus musculus BAC clone RP23-242G4 from chromosome 6, complete sequence
          Length = 209147

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aaaagaaaagagaaaagaac 73
              ||||||||||||||||||||
Sbjct: 145171 aaaagaaaagagaaaagaac 145190
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>emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chromosome X, complete
              sequence
          Length = 213187

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 61     aagagaaaagaacacctttctatt 84
              ||||||||| ||||||||||||||
Sbjct: 173781 aagagaaaataacacctttctatt 173758
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>gb|AC121834.4| Mus musculus BAC clone RP24-72F20 from chromosome 5, complete sequence
          Length = 226382

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    caaaagaaaagagaaaagaa 72
             ||||||||||||||||||||
Sbjct: 39756 caaaagaaaagagaaaagaa 39775
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>dbj|AP000348.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone N27C7
          Length = 39617

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 54    aaaagaaaagagaaaagaacacct 77
             ||||||||||| ||||||||||||
Sbjct: 23073 aaaagaaaagaaaaaagaacacct 23096
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>dbj|AP001169.1| Homo sapiens genomic DNA, chromosome 18q21, deleted region in human lung
              cancer, complete sequence
          Length = 146736

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aaagaaaagagaaaagaaca 74
              ||||||||||||||||||||
Sbjct: 106381 aaagaaaagagaaaagaaca 106362


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,196,401
Number of Sequences: 3902068
Number of extensions: 3196401
Number of successful extensions: 106071
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105595
Number of HSP's gapped (non-prelim): 476
length of query: 371
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 349
effective length of database: 17,147,199,772
effective search space: 5984372720428
effective search space used: 5984372720428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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