ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl07d02 |
|---|---|
| Clone Library Name | barley_pub |
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 137 bits (345), Expect = 1e-32 Identities = 73/90 (81%), Positives = 73/90 (81%) Frame = +2 Query: 212 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 391 MLPRKREIVAGEVEDLQKK MA RGNEIDEDLHSRQLAVYGRETM Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60 Query: 392 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVK Sbjct: 61 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 90 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 353 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 + Q++V+G + +L + + + G LG E KNL L G+ Sbjct: 445 YDAQISVFGSKLQNKLEEAKIFMVGSGALGCEFLKNLALMGI 486
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 135 bits (339), Expect = 7e-32 Identities = 72/90 (80%), Positives = 72/90 (80%) Frame = +2 Query: 212 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGRETM 391 MLPRKREIVAGEVEDLQKK MA RGNEIDEDLHSRQLAVYGRETM Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60 Query: 392 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 K LFGSNVLVSGLQGLGAEIAKNLVLAGVK Sbjct: 61 KPLFGSNVLVSGLQGLGAEIAKNLVLAGVK 90 Score = 30.0 bits (66), Expect = 3.3 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +2 Query: 353 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 + Q++V+G +L + + + G LG E KNL L G+ Sbjct: 445 YDAQISVFGSTLQNKLEEAKIFMVGSGALGCEFLKNLALMGI 486
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 87.8 bits (216), Expect = 1e-17 Identities = 44/49 (89%), Positives = 46/49 (93%) Frame = +2 Query: 335 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 EIDEDLHSRQLAVYGRETM+RLF S+VLVSGL GLGAEIAKNL LAGVK Sbjct: 45 EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLGAEIAKNLALAGVK 93 Score = 34.3 bits (77), Expect = 0.17 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +2 Query: 353 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 + Q++V+G + K++ +N V G LG E KNL L GV Sbjct: 448 YDAQVSVFGSKLQKKMEEANTFVVGSGALGCEFLKNLALMGV 489
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 70.1 bits (170), Expect = 3e-12 Identities = 38/57 (66%), Positives = 45/57 (78%), Gaps = 2/57 (3%) Frame = +2 Query: 317 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 MA+ G+E IDE L+SRQL V G E MKRL S+VLVSGL+GLG EIAKN++L GVK Sbjct: 41 MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVK 97
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 70.1 bits (170), Expect = 3e-12 Identities = 38/57 (66%), Positives = 45/57 (78%), Gaps = 2/57 (3%) Frame = +2 Query: 317 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 MA+ G+E IDE L+SRQL V G E MKRL S+VLVSGL+GLG EIAKN++L GVK Sbjct: 41 MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVK 97
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 68.2 bits (165), Expect = 1e-11 Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 2/57 (3%) Frame = +2 Query: 317 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 MA+ G+E IDE L+SRQL V G E MK L S+VLVSGL+GLG EIAKN++L GVK Sbjct: 41 MAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIILGGVK 97
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 65.5 bits (158), Expect = 7e-11 Identities = 33/49 (67%), Positives = 40/49 (81%) Frame = +2 Query: 335 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 EIDE L+SRQL V G+E M ++ SNVL+ GL+GLG EIAKN+VLAGVK Sbjct: 13 EIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVK 61
>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)| Length = 1011 Score = 64.7 bits (156), Expect = 1e-10 Identities = 32/47 (68%), Positives = 39/47 (82%) Frame = +2 Query: 338 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 +DE+L+SRQL V G M+R+ G+ VLVSGLQGLGAE+AKNLVL GV Sbjct: 10 LDEELYSRQLYVLGSPAMQRIQGARVLVSGLQGLGAEVAKNLVLMGV 56
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 63.2 bits (152), Expect = 4e-10 Identities = 32/50 (64%), Positives = 38/50 (76%) Frame = +2 Query: 332 NEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 N IDE L+SRQL V G E MK++ SNVL+ G +GLG EIAKN+ LAGVK Sbjct: 13 NTIDEGLYSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVK 62
>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 350 Score = 55.5 bits (132), Expect = 7e-08 Identities = 26/43 (60%), Positives = 34/43 (79%) Frame = +2 Query: 353 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 + RQ+ ++G E KRL S VL+ G++GLGAEIAKNL+LAGVK Sbjct: 23 YDRQIRLWGLEAQKRLRASRVLIVGMKGLGAEIAKNLILAGVK 65
>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 346 Score = 55.5 bits (132), Expect = 7e-08 Identities = 27/43 (62%), Positives = 34/43 (79%) Frame = +2 Query: 353 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 + RQ+ ++G E KRL S VL+ GL+GLGAEIAKNL+LAGVK Sbjct: 19 YDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVK 61
>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 37.4 bits (85), Expect = 0.021 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = +2 Query: 317 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 MA++G + E + RQL ++G + L ++V + G EI KNLVL G+ Sbjct: 1 MAQQGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI 54
>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 36.2 bits (82), Expect = 0.046 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = +2 Query: 317 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 MA+ G + E + RQL ++G + L ++V + G EI KNLVL G+ Sbjct: 1 MAQPGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI 54
>ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) (Protooncogene protein 1) (HPP1) Length = 534 Score = 36.2 bits (82), Expect = 0.046 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = +2 Query: 317 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 MA+ G + E + RQL ++G + L ++V + G EI KNLVL G+ Sbjct: 1 MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI 54
>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme E1 3) Length = 444 Score = 36.2 bits (82), Expect = 0.046 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +2 Query: 383 ETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 ET+K F S +L+ G GLG EI K+L L+G + Sbjct: 37 ETLKSAFSSKILIIGAGGLGCEILKDLALSGFR 69
>ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 510 Score = 36.2 bits (82), Expect = 0.046 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = +2 Query: 317 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 MA+ G + E + RQL ++G + L ++V + G EI KNLVL G+ Sbjct: 1 MAQPGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI 54
>RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 homolog)| Length = 347 Score = 34.3 bits (77), Expect = 0.17 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Frame = +2 Query: 317 MARRGNEIDED---LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 M + ++ ED L+ RQ+ ++G + + VL+ L +G+EI K++VL+G+ Sbjct: 1 MDMKVEKLSEDEIALYDRQIRLWGMTAQANMRSAKVLLINLGAIGSEITKSIVLSGI 57
>RAD31_SCHPO (P79064) DNA damage tolerance protein rad31| Length = 307 Score = 33.9 bits (76), Expect = 0.23 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = +2 Query: 350 LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 L+ RQ+ ++G + L S VL+ L EIAKNLVL+G+ Sbjct: 13 LYDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLSGI 55
>HESA1_ANAVT (P46049) Protein hesA, heterocyst| Length = 267 Score = 33.9 bits (76), Expect = 0.23 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +2 Query: 353 HSRQLAV--YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 +SRQ+ + +G KRL + VLV+G+ GLG A L +AGV Sbjct: 12 YSRQMMLPNFGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGV 55
>ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 535 Score = 33.9 bits (76), Expect = 0.23 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +2 Query: 317 MARRGN-EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 MA+ G + E + RQL ++G + L ++V V G EI KNLVL G+ Sbjct: 1 MAQPGRASLKEQRYDRQLRLWGDHGQEALESAHVCVINATATGTEILKNLVLPGI 55
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 33.5 bits (75), Expect = 0.30 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +2 Query: 380 RETMKRLFGSNVLVSGLQGLGAEIAKNLVLAG 475 RE + + G VLV G G+G E+ KNLVL G Sbjct: 9 RELAEAVAGGRVLVVGAGGIGCELLKNLVLTG 40
>HESA2_ANAVT (P46048) Protein hesA, vegetative| Length = 265 Score = 33.5 bits (75), Expect = 0.30 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +2 Query: 374 YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 +G+E +RL + VLV+G+ GLG A L +AGV Sbjct: 21 FGQEAQQRLKSATVLVTGVGGLGGTAALYLAIAGV 55
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 33.5 bits (75), Expect = 0.30 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +2 Query: 380 RETMKRLFGSNVLVSGLQGLGAEIAKNLVLAG 475 RE + + G VLV G G+G E+ KNLVL G Sbjct: 9 RELAEAVSGGRVLVVGAGGIGCELLKNLVLTG 40
>ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 32.7 bits (73), Expect = 0.51 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +2 Query: 338 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 I E + RQL ++G + L ++V + G EI KNLVL G+ Sbjct: 7 IKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI 53
>ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subunit| (Ubiquitin-like activation protein 1) Length = 541 Score = 32.7 bits (73), Expect = 0.51 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +2 Query: 353 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 + RQ+ ++G E + ++ V G L EI K+LVLAGV+ Sbjct: 10 YDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQ 52
>UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3 homolog) (Ectopic membrane ruffles in embryo protein 1) Length = 430 Score = 32.7 bits (73), Expect = 0.51 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +2 Query: 371 VYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 V G E + L + +LV G GLG E+ KNL L+G + Sbjct: 31 VPGPENFEALQNTKILVIGAGGLGCELLKNLALSGFR 67
>HESA_ANASP (P18500) Protein hesA| Length = 252 Score = 32.0 bits (71), Expect = 0.87 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +2 Query: 374 YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 +G KRL + VLV+G+ GLG A L +AGV Sbjct: 6 FGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGV 40
>ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 31.2 bits (69), Expect = 1.5 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +2 Query: 344 EDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 E + RQL ++G + L ++V + G EI KNLVL G+ Sbjct: 9 EQRYDRQLRLWGDHGQEALENAHVCLINATASGTEILKNLVLPGI 53
>CP2D6_HUMAN (P10635) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6) (P450-DB1)| (Debrisoquine 4-hydroxylase) Length = 497 Score = 30.8 bits (68), Expect = 1.9 Identities = 22/49 (44%), Positives = 26/49 (53%) Frame = -1 Query: 400 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 254 EAL LA I +A +LVDL+ + PG LPLPG G LL V Sbjct: 4 EALVPLAVI---VAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>YBHO_SALTY (Q8ZQP4) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)| (Cardiolipin synthase) (CL synthase) Length = 413 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Frame = +1 Query: 349 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 450 P QSPARR W R H+A P Q +W RD Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206
>YBHO_SALTI (Q8Z883) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)| (Cardiolipin synthase) (CL synthase) Length = 413 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Frame = +1 Query: 349 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 450 P QSPARR W R H+A P Q +W RD Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206
>RPOC_BACHK (Q6HPR5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/53 (32%), Positives = 30/53 (56%) Frame = +2 Query: 323 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV+ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVE 882
>RPOC_BACCZ (Q63H97) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/53 (32%), Positives = 30/53 (56%) Frame = +2 Query: 323 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV+ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVE 882
>RPOC_BACCR (Q81J47) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/53 (32%), Positives = 30/53 (56%) Frame = +2 Query: 323 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV+ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVE 882
>RPOC_BACC1 (Q73FA3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/53 (32%), Positives = 30/53 (56%) Frame = +2 Query: 323 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV+ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVE 882
>RPOC_BACAN (P77819) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1203 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/53 (32%), Positives = 30/53 (56%) Frame = +2 Query: 323 RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 481 + GNE+ E L+ R + + R+T+K VLV+ Q + +IA + +GV+ Sbjct: 830 KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVE 882
>CP2DP_PIG (O46658) Cytochrome P450 2D25 (EC 1.14.14.-) (CYPIID25) (Vitamin| D(3) 25-hydroxylase) Length = 499 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -1 Query: 349 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 254 +LVDL+ + PG +PLPG G LLQV Sbjct: 20 LLVDLMHRRSRWAPRYPPGPMPLPGLGNLLQV 51
>CP2DH_MACFA (Q29488) Cytochrome P450 2D17 (EC 1.14.14.1) (CYPIID17)| Length = 497 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -1 Query: 394 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 254 L L + +A +LVDL+ + PG LPLPG G LL V Sbjct: 3 LDALVPLAVTVAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2D6_PANTR (Q2XNC8) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)| Length = 497 Score = 29.3 bits (64), Expect = 5.6 Identities = 21/49 (42%), Positives = 25/49 (51%) Frame = -1 Query: 400 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 254 EAL LA I + +LVDL+ + PG LPLPG G LL V Sbjct: 4 EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2D6_PANPA (Q2XNC9) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6)| Length = 497 Score = 29.3 bits (64), Expect = 5.6 Identities = 21/49 (42%), Positives = 25/49 (51%) Frame = -1 Query: 400 EALHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 254 EAL LA I + +LVDL+ + PG LPLPG G LL V Sbjct: 4 EALVPLAVI---VTIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2DQ_RAT (P10634) Cytochrome P450 2D26 (EC 1.14.14.1) (CYPIID26) (P450-DB2)| (P450-CMF2) (Debrisoquine 4-hydroxylase) Length = 500 Score = 29.3 bits (64), Expect = 5.6 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 Query: 349 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 254 +LVDLV + PG +PLPG G LLQV Sbjct: 21 LLVDLVHRHKFWTAHYPPGPVPLPGLGNLLQV 52
>KLF9_HUMAN (Q13886) Krueppel-like factor 9 (Transcription factor BTEB1) (Basic| transcription element-binding protein 1) (BTE-binding protein 1) (GC box-binding protein 1) Length = 244 Score = 28.9 bits (63), Expect = 7.3 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = +1 Query: 349 PAQSPARRLWPRDHEAPLRLQRPRLWTSGSRCRDRKEPCP-RGC 477 P+ SP R P +PL L P + G +++ CP GC Sbjct: 107 PSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKRHKCPYSGC 150
>UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 413 VLVSGLQGLGAEIAKNLVLAGVK 481 VLV G GLG E+ KNL L+G + Sbjct: 72 VLVIGAGGLGCELLKNLALSGFR 94
>UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 413 VLVSGLQGLGAEIAKNLVLAGVK 481 VLV G GLG E+ KNL L+G + Sbjct: 72 VLVIGAGGLGCELLKNLALSGFR 94
>RPOC_WEIHE (P96177) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1046 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = +2 Query: 329 GNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGV 478 GNE+ E L+ R L Y ++++ + LV + + +IAK ++ AGV Sbjct: 766 GNEVIESLYERILGRYAQKSVFEPQTGDKLVGHNEMITEDIAKRIIEAGV 815
>CP2DJ_CALJA (O18992) Cytochrome P450 2D19 (EC 1.14.14.1) (CYPIID19) (P450| CM2D-1) Length = 497 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -1 Query: 394 LHGLAAIDGELATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 254 L L + +A +LVDL+ + PG +PLPG G LL V Sbjct: 3 LDALVPLAVTVAIFVLLVDLMHRRQRWAARYPPGPMPLPGLGNLLHV 49
>UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 413 VLVSGLQGLGAEIAKNLVLAGVK 481 VLV G GLG E+ KNL L+G + Sbjct: 72 VLVIGAGGLGCELLKNLALSGFR 94
>UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 413 VLVSGLQGLGAEIAKNLVLAGVK 481 VLV G GLG E+ KNL L+G + Sbjct: 72 VLVIGAGGLGCELLKNLALSGFR 94
>LEU1_STRCO (O31046) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 573 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +3 Query: 3 CNPVLQSHPRNPRRTVPRLLPSPTRQANPRFRGGRTRWI*RGSSRR 140 C V+ ++ P R + LP+ ++ P R W+ R SRR Sbjct: 200 CEAVMDTYQPGPGREIILNLPATVERSTPSTHADRFEWMGRNLSRR 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,648,517 Number of Sequences: 219361 Number of extensions: 982701 Number of successful extensions: 3947 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3944 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
