ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_184796.1| Oryza sativa (japonica cultivar-group), mRNA 125 1e-25
2dbj|AK068322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
3gb|AY023193.1| Oryza sativa microsatellite MRG5518 containing (G... 115 1e-22
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 115 1e-22
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
6gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genom... 115 1e-22
7gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic ... 115 1e-22
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
9dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
10ref|XM_483666.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.35
11ref|XM_507324.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.35
12gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL03... 44 0.35
13gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.35
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
15gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 44 0.35
16dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
17dbj|AK104490.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
18dbj|AK070842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
19ref|XM_463142.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
20gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
21gb|AC135501.4| Oryza sativa chromosome 3 BAC OSJNBb0011J16 genom... 42 1.4
22emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.4
23emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.4
24emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 42 1.4
25gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic... 42 1.4
26dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
27gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
28emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.4
29ref|XM_464518.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
30ref|XM_450404.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
31gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence 40 5.5
32gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8... 40 5.5
33ref|NM_029850.2| Mus musculus B-cell CLL/lymphoma 7A (Bcl7a), mRNA 40 5.5
34gb|AC144714.4| Mus musculus BAC clone RP24-371M20 from chromosom... 40 5.5
35gb|BC038481.1| Mus musculus B-cell CLL/lymphoma 7A, mRNA (cDNA c... 40 5.5
36gb|BC046777.1| Mus musculus B-cell CLL/lymphoma 7A, mRNA (cDNA c... 40 5.5
37gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, co... 40 5.5
38ref|XM_987782.1| PREDICTED: Mus musculus hypothetical protein LO... 40 5.5
39ref|XM_992598.1| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
40ref|XM_899854.2| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
41ref|XM_899846.2| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
42ref|XM_899859.2| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
43ref|XM_130308.5| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
44ref|XM_921143.2| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
45ref|XM_921164.2| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
46ref|XM_130363.6| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
47ref|XM_921174.2| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
48ref|XM_909085.2| PREDICTED: Mus musculus low density lipoprotein... 40 5.5
49ref|XM_754327.1| Ustilago maydis 521 hypothetical protein (UM032... 40 5.5
50ref|XM_386764.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 5.5
51emb|X63462.1|RCHEL R.capsulatus ORF124, helA, helB, helC & ORF52... 40 5.5
52gb|BC017640.1| Mus musculus B-cell CLL/lymphoma 7A, mRNA (cDNA c... 40 5.5
53gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.5
54gb|AF532105.1|AF532104S2 Aegilops tauschii strain TA1649 cosmid ... 40 5.5
55gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.5
56gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 5.5
57gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.5
58dbj|AK157720.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 5.5
59dbj|AK165434.1| Mus musculus adult male kidney cDNA, RIKEN full-... 40 5.5
60gb|U55373.2| Caenorhabditis elegans cosmid F26F12, complete sequ... 40 5.5
61dbj|AK084165.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 5.5
62dbj|AK049346.2| Mus musculus ES cells cDNA, RIKEN full-length en... 40 5.5
63gb|U69979.1|RCU69979 Rhodobacter capsulatus YajC (yajC) gene, pa... 40 5.5
64dbj|AK086803.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 40 5.5
65ref|NM_072127.2| Caenorhabditis elegans F26F12.3b (F26F12.3) mRN... 40 5.5
66ref|NM_072126.2| Caenorhabditis elegans F26F12.3a (F26F12.3) mRN... 40 5.5
67ref|NM_001028685.1| Caenorhabditis elegans F26F12.3c (F26F12.3) ... 40 5.5
68dbj|AK044782.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 5.5
69dbj|AK014498.1| Mus musculus 14 days embryo liver cDNA, RIKEN fu... 40 5.5
70dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
71dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
72gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.5
73dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
74dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 5.5
75dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, c... 40 5.5
76dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
77dbj|AP005739.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
78dbj|AP006155.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
79dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
80dbj|AK068381.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
81emb|Z74475.1|CER04F11 Caenorhabditis elegans Cosmid R04F11, comp... 40 5.5
82emb|AL845489.10| Mouse DNA sequence from clone RP23-300E5 on chr... 40 5.5
83gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 5.5
84gb|AC126054.5| Mus musculus BAC clone RP23-298O13 from 8, comple... 40 5.5 
>ref|NM_184796.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2859

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                       
Query: 297 caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaagcgcaa 356
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 168 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaagcgcaa 227

                                                                  
Query: 357 gggcgaggagaggcgcacctcccgctcccgctccgacgctgtccacaagagggag 411
           ||| |||||| | |||| |  |||| ||||||| || ||  ||||||||||||||
Sbjct: 228 gggggaggagcgccgcatcggccgcgcccgctctgaggccatccacaagagggag 282



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 233 aggggaggaacggcccggcggccgtggccatgaaggcgcgcggggccgcggcggcgg 289
           |||||| |||||||||||| || || || |||||||| ||||| |||||||||||||
Sbjct: 83  aggggaagaacggcccggctgcggtcgcgatgaaggcccgcggcgccgcggcggcgg 139



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 151 atggcgaagacgaagccgatggcagctg 178
           ||||||||||||||||| ||||| ||||
Sbjct: 1   atggcgaagacgaagcccatggcggctg 28
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>dbj|AK068322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150A21, full
           insert sequence
          Length = 3259

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                       
Query: 297 caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaagcgcaa 356
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 104 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaagcgcaa 163

                                                                  
Query: 357 gggcgaggagaggcgcacctcccgctcccgctccgacgctgtccacaagagggag 411
           ||| |||||| | |||| |  |||| ||||||| || ||  ||||||||||||||
Sbjct: 164 gggggaggagcgccgcatcggccgcgcccgctctgaggccatccacaagagggag 218
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>gb|AY023193.1| Oryza sativa microsatellite MRG5518 containing (GCG)X9, closest to
           marker G1316, genomic sequence
          Length = 227

 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                       
Query: 297 caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaagcgcaa 356
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 139 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaagcgcaa 198

                     
Query: 357 gggcgaggag 366
           ||| ||||||
Sbjct: 199 gggggaggag 208



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 233 aggggaggaacggcccggcggccgtggccatgaaggcgcgcggggccgcggcggcgg 289
           |||||| |||||||||||| || || || |||||||| ||||| |||||||||||||
Sbjct: 54  aggggaagaacggcccggctgcggtcgcgatgaaggcccgcggcgccgcggcggcgg 110
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                            
Query: 297      caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaagcgcaa 356
                |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 22100266 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaagcgcaa 22100207

                          
Query: 357      gggcgaggag 366
                ||| ||||||
Sbjct: 22100206 gggggaggag 22100197



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 233      aggggaggaacggcccggcggccgtggccatgaaggcgcgcggggccgcggcggcgg 289
                |||||| |||||||||||| || || || |||||||| ||||| |||||||||||||
Sbjct: 22100351 aggggaagaacggcccggctgcggtcgcgatgaaggcccgcggcgccgcggcggcgg 22100295



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 269      cgcgcggggccgcggcggcgg 289
                |||||||||||||||||||||
Sbjct: 30354909 cgcgcggggccgcggcggcgg 30354889



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 269      cgcgcggggccgcggcggcgg 289
                |||||||||||||||||||||
Sbjct: 22749757 cgcgcggggccgcggcggcgg 22749737



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 269      cgcgcggggccgcggcggcgg 289
                |||||||||||||||||||||
Sbjct: 22749657 cgcgcggggccgcggcggcgg 22749637



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 146      cggccatggcgaagacgaagccgatggcagctg 178
                |||| ||||||||||||||||| ||||| ||||
Sbjct: 22100438 cggcaatggcgaagacgaagcccatggcggctg 22100406



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 279      cgcggcggcggagcggagca 298
                ||||||||||||||||||||
Sbjct: 11182531 cgcggcggcggagcggagca 11182550
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                            
Query: 297      caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaagcgcaa 356
                |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 22093295 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaagcgcaa 22093236

                          
Query: 357      gggcgaggag 366
                ||| ||||||
Sbjct: 22093235 gggggaggag 22093226



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 233      aggggaggaacggcccggcggccgtggccatgaaggcgcgcggggccgcggcggcgg 289
                |||||| |||||||||||| || || || |||||||| ||||| |||||||||||||
Sbjct: 22093380 aggggaagaacggcccggctgcggtcgcgatgaaggcccgcggcgccgcggcggcgg 22093324



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 269      cgcgcggggccgcggcggcgg 289
                |||||||||||||||||||||
Sbjct: 30446331 cgcgcggggccgcggcggcgg 30446311



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 269      cgcgcggggccgcggcggcgg 289
                |||||||||||||||||||||
Sbjct: 22742786 cgcgcggggccgcggcggcgg 22742766



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 269      cgcgcggggccgcggcggcgg 289
                |||||||||||||||||||||
Sbjct: 22742686 cgcgcggggccgcggcggcgg 22742666



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 146      cggccatggcgaagacgaagccgatggcagctg 178
                |||| ||||||||||||||||| ||||| ||||
Sbjct: 22093467 cggcaatggcgaagacgaagcccatggcggctg 22093435



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 279      cgcggcggcggagcggagca 298
                ||||||||||||||||||||
Sbjct: 11179294 cgcggcggcggagcggagca 11179313
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>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete
             sequence
          Length = 167397

 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                         
Query: 297   caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaagcgcaa 356
             |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 48016 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaagcgcaa 48075

                       
Query: 357   gggcgaggag 366
             ||| ||||||
Sbjct: 48076 gggggaggag 48085



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 233   aggggaggaacggcccggcggccgtggccatgaaggcgcgcggggccgcggcggcgg 289
             |||||| |||||||||||| || || || |||||||| ||||| |||||||||||||
Sbjct: 47931 aggggaagaacggcccggctgcggtcgcgatgaaggcccgcggcgccgcggcggcgg 47987



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 146   cggccatggcgaagacgaagccgatggcagctg 178
             |||| ||||||||||||||||| ||||| ||||
Sbjct: 47844 cggcaatggcgaagacgaagcccatggcggctg 47876
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>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete
              sequence
          Length = 132987

 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Plus

                                                                          
Query: 297    caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaagcgcaa 356
              |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 124614 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaagcgcaa 124673

                        
Query: 357    gggcgaggag 366
              ||| ||||||
Sbjct: 124674 gggggaggag 124683



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                       
Query: 233    aggggaggaacggcccggcggccgtggccatgaaggcgcgcggggccgcggcggcgg 289
              |||||| |||||||||||| || || || |||||||| ||||| |||||||||||||
Sbjct: 124529 aggggaagaacggcccggctgcggtcgcgatgaaggcccgcggcgccgcggcggcgg 124585



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 146    cggccatggcgaagacgaagccgatggcagctg 178
              |||| ||||||||||||||||| ||||| ||||
Sbjct: 124442 cggcaatggcgaagacgaagcccatggcggctg 124474
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 268      gcgcgcggggccgcggcggcggag 291
                ||||||||||||||||||||||||
Sbjct: 18739775 gcgcgcggggccgcggcggcggag 18739752



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     ggccgcggcggcggagcgga 295
               ||||||||||||||||||||
Sbjct: 5654928 ggccgcggcggcggagcgga 5654909
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>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0071O21
          Length = 158410

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 268   gcgcgcggggccgcggcggcggag 291
             ||||||||||||||||||||||||
Sbjct: 82417 gcgcgcggggccgcggcggcggag 82394
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>ref|XM_483666.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1158

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 276 ggccgcggcggcggagcggagc 297
           ||||||||||||||||||||||
Sbjct: 60  ggccgcggcggcggagcggagc 39
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>ref|XM_507324.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B11.9 mRNA
          Length = 1229

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 276 ggccgcggcggcggagcggagc 297
           ||||||||||||||||||||||
Sbjct: 71  ggccgcggcggcggagcggagc 50
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>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene
             region
          Length = 65993

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 276   ggccgcggcggcggagcggagc 297
             ||||||||||||||||||||||
Sbjct: 57041 ggccgcggcggcggagcggagc 57062
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 181     gcggcctcggcggacaagaaaa 202
               ||||||||||||||||||||||
Sbjct: 4857439 gcggcctcggcggacaagaaaa 4857418
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 276      ggccgcggcggcggagcggagc 297
                ||||||||||||||||||||||
Sbjct: 27552001 ggccgcggcggcggagcggagc 27552022
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 144     ctcggccatggcgaagacgaag 165
               ||||||||||||||||||||||
Sbjct: 1409974 ctcggccatggcgaagacgaag 1409995
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>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1479_B11
          Length = 105702

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 276   ggccgcggcggcggagcggagc 297
             ||||||||||||||||||||||
Sbjct: 34291 ggccgcggcggcggagcggagc 34312
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>dbj|AK104490.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B09, full
           insert sequence
          Length = 1158

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 276 ggccgcggcggcggagcggagc 297
           ||||||||||||||||||||||
Sbjct: 60  ggccgcggcggcggagcggagc 39
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>dbj|AK070842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074O14, full
           insert sequence
          Length = 1229

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 276 ggccgcggcggcggagcggagc 297
           ||||||||||||||||||||||
Sbjct: 71  ggccgcggcggcggagcggagc 50
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>ref|XM_463142.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 207

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 269 cgcgcggggccgcggcggcgg 289
           |||||||||||||||||||||
Sbjct: 8   cgcgcggggccgcggcggcgg 28
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>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04
             map S1466, complete sequence
          Length = 140012

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   cgcgcggggccgcggcggcgg 289
             |||||||||||||||||||||
Sbjct: 19688 cgcgcggggccgcggcggcgg 19668



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   cgcgcggggccgcggcggcgg 289
             |||||||||||||||||||||
Sbjct: 19588 cgcgcggggccgcggcggcgg 19568
to top
>gb|AC135501.4| Oryza sativa chromosome 3 BAC OSJNBb0011J16 genomic sequence, complete
             sequence
          Length = 124170

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   cgcgcggggccgcggcggcgg 289
             |||||||||||||||||||||
Sbjct: 87421 cgcgcggggccgcggcggcgg 87401



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   cgcgcggggccgcggcggcgg 289
             |||||||||||||||||||||
Sbjct: 87321 cgcgcggggccgcggcggcgg 87301
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 273     cggggccgcggcggcggagcg 293
               |||||||||||||||||||||
Sbjct: 4057376 cggggccgcggcggcggagcg 4057356
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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 267    ggcgcgcggggccgcggcggc 287
              |||||||||||||||||||||
Sbjct: 144929 ggcgcgcggggccgcggcggc 144909
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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 267    ggcgcgcggggccgcggcggc 287
              |||||||||||||||||||||
Sbjct: 257347 ggcgcgcggggccgcggcggc 257327
to top
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete
              sequence
          Length = 149380

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 269    cgcgcggggccgcggcggcgg 289
              |||||||||||||||||||||
Sbjct: 122106 cgcgcggggccgcggcggcgg 122126
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 269     cgcgcggggccgcggcggcgg 289
               |||||||||||||||||||||
Sbjct: 9503119 cgcgcggggccgcggcggcgg 9503139



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 269     cgcgcggggccgcggcggcgg 289
               |||||||||||||||||||||
Sbjct: 9502998 cgcgcggggccgcggcggcgg 9503018
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 269     cgcgcggggccgcggcggcgg 289
               |||||||||||||||||||||
Sbjct: 9503004 cgcgcggggccgcggcggcgg 9503024



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 269     cgcgcggggccgcggcggcgg 289
               |||||||||||||||||||||
Sbjct: 9502883 cgcgcggggccgcggcggcgg 9502903
to top
>emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC OSJNBb0077C18 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 123766

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 269   cgcgcggggccgcggcggcgg 289
             |||||||||||||||||||||
Sbjct: 88343 cgcgcggggccgcggcggcgg 88363



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 269   cgcgcggggccgcggcggcgg 289
             |||||||||||||||||||||
Sbjct: 88222 cgcgcggggccgcggcggcgg 88242
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>ref|XM_464518.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 814

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 276 ggccgcggcggcggagcgga 295
           ||||||||||||||||||||
Sbjct: 321 ggccgcggcggcggagcgga 340
to top
>ref|XM_450404.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 429

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 363 ggagaggcgcacctcccgctcccg 386
           |||||||||||||||| |||||||
Sbjct: 155 ggagaggcgcacctccagctcccg 132
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>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    agaaaacgaacaagaagaaa 216
              ||||||||||||||||||||
Sbjct: 263460 agaaaacgaacaagaagaaa 263479
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>gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence
          Length = 154240

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   agaaaacgaacaagaagaaa 216
             ||||||||||||||||||||
Sbjct: 56607 agaaaacgaacaagaagaaa 56626
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>ref|NM_029850.2| Mus musculus B-cell CLL/lymphoma 7A (Bcl7a), mRNA
          Length = 3820

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gaacaagaagaaaggcaagg 223
           ||||||||||||||||||||
Sbjct: 290 gaacaagaagaaaggcaagg 309
to top
>gb|AC144714.4| Mus musculus BAC clone RP24-371M20 from chromosome 8, complete sequence
          Length = 176994

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    gaacaagaagaaaggcaagg 223
              ||||||||||||||||||||
Sbjct: 146557 gaacaagaagaaaggcaagg 146538
to top
>gb|BC038481.1| Mus musculus B-cell CLL/lymphoma 7A, mRNA (cDNA clone MGC:47407
           IMAGE:4501205), complete cds
          Length = 3820

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gaacaagaagaaaggcaagg 223
           ||||||||||||||||||||
Sbjct: 290 gaacaagaagaaaggcaagg 309
to top
>gb|BC046777.1| Mus musculus B-cell CLL/lymphoma 7A, mRNA (cDNA clone MGC:61344
           IMAGE:5709511), complete cds
          Length = 2506

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gaacaagaagaaaggcaagg 223
           ||||||||||||||||||||
Sbjct: 195 gaacaagaagaaaggcaagg 214
to top
>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence
          Length = 219617

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    gaacaagaagaaaggcaagg 223
              ||||||||||||||||||||
Sbjct: 110587 gaacaagaagaaaggcaagg 110606
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>ref|XM_987782.1| PREDICTED: Mus musculus hypothetical protein LOC667020 (LOC667020),
           mRNA
          Length = 390

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 296 gcgcggggccgcggcggcgg 315
to top
>ref|XM_992598.1| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2 (Lrp2), mRNA
          Length = 15482

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_899854.2| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2, transcript variant 4 (Lrp2), mRNA
          Length = 3986

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_899846.2| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2, transcript variant 3 (Lrp2), mRNA
          Length = 4408

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_899859.2| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2, transcript variant 5 (Lrp2), mRNA
          Length = 15446

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_130308.5| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2, transcript variant 1 (Lrp2), mRNA
          Length = 15467

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_921143.2| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2, transcript variant 7 (Lrp2), mRNA
          Length = 2266

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_921164.2| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2, transcript variant 8 (Lrp2), mRNA
          Length = 3986

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_130363.6| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2, transcript variant 2 (Lrp2), mRNA
          Length = 4408

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_921174.2| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2, transcript variant 9 (Lrp2), mRNA
          Length = 15446

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_909085.2| PREDICTED: Mus musculus low density lipoprotein receptor-related
           protein 2, transcript variant 6 (Lrp2), mRNA
          Length = 15467

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 180 gcgcggggccgcggcggcgg 199
to top
>ref|XM_754327.1| Ustilago maydis 521 hypothetical protein (UM03273.1) partial mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 cacctcccgctcccgctccg 391
           ||||||||||||||||||||
Sbjct: 759 cacctcccgctcccgctccg 778
to top
>ref|XM_386764.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06588.1)
            partial mRNA
          Length = 1659

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  aagcgcaagggcgaggagag 368
            ||||||||||||||||||||
Sbjct: 1348 aagcgcaagggcgaggagag 1367
to top
>emb|X63462.1|RCHEL R.capsulatus ORF124, helA, helB, helC & ORF52 DNA
          Length = 3272

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 ccatggcgaagacgaagccg 168
           ||||||||||||||||||||
Sbjct: 259 ccatggcgaagacgaagccg 240
to top
>gb|BC017640.1| Mus musculus B-cell CLL/lymphoma 7A, mRNA (cDNA clone MGC:28969
           IMAGE:4482250), complete cds
          Length = 2135

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gaacaagaagaaaggcaagg 223
           ||||||||||||||||||||
Sbjct: 279 gaacaagaagaaaggcaagg 298
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 268     gcgcgcggggccgcggcggc 287
               ||||||||||||||||||||
Sbjct: 2374216 gcgcgcggggccgcggcggc 2374197
to top
>gb|AF532105.1|AF532104S2 Aegilops tauschii strain TA1649 cosmid 69-7-1 putative GAG-POL
             precursor, gene, complete cds; and unknown genes
          Length = 11825

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   gggccgcggcggcggagcgg 294
             ||||||||||||||||||||
Sbjct: 10414 gggccgcggcggcggagcgg 10395
to top
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0011G21, from chromosome 3, complete sequence
          Length = 142401

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   cgcggcggcggagcggagca 298
             ||||||||||||||||||||
Sbjct: 95888 cgcggcggcggagcggagca 95907
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 333     cgacgtgctcggcaagaagc 352
               ||||||||||||||||||||
Sbjct: 1691815 cgacgtgctcggcaagaagc 1691834
to top
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0085H08, from chromosome 3, complete sequence
          Length = 126708

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   cgcggcggcggagcggagca 298
             ||||||||||||||||||||
Sbjct: 98198 cgcggcggcggagcggagca 98179
to top
>dbj|AK157720.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
           enriched library, clone:B130008D23 product:B-cell
           CLL/lymphoma 7A, full insert sequence
          Length = 4641

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gaacaagaagaaaggcaagg 223
           ||||||||||||||||||||
Sbjct: 314 gaacaagaagaaaggcaagg 333
to top
>dbj|AK165434.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:F520015P22 product:low density
           lipoprotein receptor-related protein 2, full insert
           sequence
          Length = 3950

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 142 gcgcggggccgcggcggcgg 161
to top
>gb|U55373.2| Caenorhabditis elegans cosmid F26F12, complete sequence
          Length = 42467

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 335   acgtgctcggcaagaagcgcaagg 358
             |||||||||| |||||||||||||
Sbjct: 17305 acgtgctcggaaagaagcgcaagg 17282
to top
>dbj|AK084165.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230004K18 product:LOW-DENSITY
           LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 PRECURSOR
           (MEGALIN) (GLYCOPROTEIN 330) homolog [Rattus
           norvegicus], full insert sequence
          Length = 4372

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 143 gcgcggggccgcggcggcgg 162
to top
>dbj|AK049346.2| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:C330026G04 product:low density lipoprotein
           receptor-related protein 2, full insert sequence
          Length = 2229

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 gcgcggggccgcggcggcgg 289
           ||||||||||||||||||||
Sbjct: 143 gcgcggggccgcggcggcgg 162
to top
>gb|U69979.1|RCU69979 Rhodobacter capsulatus YajC (yajC) gene, partial cds, and SecD (secD)
            and SecF (secF) genes, complete cds
          Length = 3000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  ccatggcgaagacgaagccg 168
            ||||||||||||||||||||
Sbjct: 2755 ccatggcgaagacgaagccg 2736
to top
>dbj|AK086803.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
           library, clone:E030001O10 product:B-cell CLL/lymphoma
           7A, full insert sequence
          Length = 3782

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gaacaagaagaaaggcaagg 223
           ||||||||||||||||||||
Sbjct: 362 gaacaagaagaaaggcaagg 381
to top
>ref|NM_072127.2| Caenorhabditis elegans F26F12.3b (F26F12.3) mRNA, complete cds
          Length = 2717

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 335 acgtgctcggcaagaagcgcaagg 358
           |||||||||| |||||||||||||
Sbjct: 223 acgtgctcggaaagaagcgcaagg 246
to top
>ref|NM_072126.2| Caenorhabditis elegans F26F12.3a (F26F12.3) mRNA, complete cds
          Length = 2719

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 335 acgtgctcggcaagaagcgcaagg 358
           |||||||||| |||||||||||||
Sbjct: 225 acgtgctcggaaagaagcgcaagg 248
to top
>ref|NM_001028685.1| Caenorhabditis elegans F26F12.3c (F26F12.3) mRNA, complete cds
          Length = 3653

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 335 acgtgctcggcaagaagcgcaagg 358
           |||||||||| |||||||||||||
Sbjct: 296 acgtgctcggaaagaagcgcaagg 319
to top
>dbj|AK044782.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930104J06 product:B-cell CLL/lymphoma 7A, full
           insert sequence
          Length = 3754

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gaacaagaagaaaggcaagg 223
           ||||||||||||||||||||
Sbjct: 336 gaacaagaagaaaggcaagg 355
to top
>dbj|AK014498.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:4432415N06 product:B-cell CLL/lymphoma
           7A, full insert sequence
          Length = 2515

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gaacaagaagaaaggcaagg 223
           ||||||||||||||||||||
Sbjct: 308 gaacaagaagaaaggcaagg 327
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 363     ggagaggcgcacctcccgctcccg 386
               |||||||||||||||| |||||||
Sbjct: 5256655 ggagaggcgcacctccagctcccg 5256678
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 270      gcgcggggccgcggcggcgg 289
                ||||||||||||||||||||
Sbjct: 24642183 gcgcggggccgcggcggcgg 24642202
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 242     acggcccggcggccgtggcc 261
               ||||||||||||||||||||
Sbjct: 2700282 acggcccggcggccgtggcc 2700263
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>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1040D09
          Length = 148102

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   gcgcggggccgcggcggcgg 289
             ||||||||||||||||||||
Sbjct: 68146 gcgcggggccgcggcggcgg 68165
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 363     ggagaggcgcacctcccgctcccg 386
               ||||||||| ||||||||||||||
Sbjct: 1300076 ggagaggcggacctcccgctcccg 1300053
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>dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence
          Length = 184026

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   tcgcgccgcaagttcgacgt 338
             ||||||||||||||||||||
Sbjct: 76375 tcgcgccgcaagttcgacgt 76356
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>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0407B12
          Length = 148762

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   gcgcggggccgcggcggcgg 289
             ||||||||||||||||||||
Sbjct: 10760 gcgcggggccgcggcggcgg 10779
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>dbj|AP005739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0012A04
          Length = 150317

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 363   ggagaggcgcacctcccgctcccg 386
             |||||||||||||||| |||||||
Sbjct: 53368 ggagaggcgcacctccagctcccg 53391
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>dbj|AP006155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1012G04
          Length = 144644

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 363   ggagaggcgcacctcccgctcccg 386
             |||||||||||||||| |||||||
Sbjct: 91595 ggagaggcgcacctccagctcccg 91618
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>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419A09
          Length = 168064

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   ggccgcggcggcggagcgga 295
             ||||||||||||||||||||
Sbjct: 82664 ggccgcggcggcggagcgga 82645
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>dbj|AK068381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147P03, full
           insert sequence
          Length = 813

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 276 ggccgcggcggcggagcgga 295
           ||||||||||||||||||||
Sbjct: 320 ggccgcggcggcggagcgga 339
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>emb|Z74475.1|CER04F11 Caenorhabditis elegans Cosmid R04F11, complete sequence
          Length = 32975

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 193  gacaagaaaacgaacaagaagaaa 216
            |||||||||||||| |||||||||
Sbjct: 6598 gacaagaaaacgaagaagaagaaa 6575
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>emb|AL845489.10| Mouse DNA sequence from clone RP23-300E5 on chromosome 2, complete
              sequence
          Length = 183980

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    gcgcggggccgcggcggcgg 289
              ||||||||||||||||||||
Sbjct: 167605 gcgcggggccgcggcggcgg 167586
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 363    ggagaggcgcacctcccgctcccg 386
              ||||||||| ||||||||||||||
Sbjct: 977272 ggagaggcggacctcccgctcccg 977249
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>gb|AC126054.5| Mus musculus BAC clone RP23-298O13 from 8, complete sequence
          Length = 233117

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    gcgcggggccgcggcggcgg 289
              ||||||||||||||||||||
Sbjct: 118107 gcgcggggccgcggcggcgg 118126


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,301,813
Number of Sequences: 3902068
Number of extensions: 2301813
Number of successful extensions: 64660
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63168
Number of HSP's gapped (non-prelim): 1492
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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