ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl07c08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB088420.1| Pseudomonas resinovorans plasmid pCAR1, complete sequence Length = 199035 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 304 ccacgccgccttcgccgcggcc 325 |||||||||||||||||||||| Sbjct: 21227 ccacgccgccttcgccgcggcc 21206
>dbj|AB047548.1| Pseudomonas resinovorans strain CA10 DNA, car gene cluster flanking region Length = 44266 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 304 ccacgccgccttcgccgcggcc 325 |||||||||||||||||||||| Sbjct: 21220 ccacgccgccttcgccgcggcc 21199
>emb|AL132992.4|CNS01DTZ Human chromosome 14 DNA sequence BAC C-2268P10 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 133186 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 cccaccctcctcttcctcctct 118 |||||||||||||||||||||| Sbjct: 14316 cccaccctcctcttcctcctct 14295
>emb|AL118555.6|CNS01DRS Human chromosome 14 DNA sequence BAC C-2011M8 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 122552 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 cccaccctcctcttcctcctct 118 |||||||||||||||||||||| Sbjct: 34412 cccaccctcctcttcctcctct 34433
>gb|AC169129.2| Mus musculus BAC clone RP23-259N3 from chromosome 7, complete sequence Length = 190493 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctaccc 122 ||||||||||||||||||||| Sbjct: 22407 cctcctcttcctcctctaccc 22427
>ref|XM_476196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 870 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tccccgccggctcacgcgccg 71 ||||||||||||||||||||| Sbjct: 368 tccccgccggctcacgcgccg 388
>ref|NM_001031157.1| Gallus gallus phosphatidylinositol 4-kinase type 2 beta (PI4K2B), mRNA Length = 2965 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 caccctcctcttcctcctcta 119 ||||||||||||||||||||| Sbjct: 258 caccctcctcttcctcctcta 238
>ref|NM_189950.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 89 cgccgccgcccaccctcctcttcctcctc 117 |||||||| ||||| |||||||||||||| Sbjct: 17 cgccgccgtccaccttcctcttcctcctc 45
>gb|AC102638.13| Mus musculus chromosome 3, clone RP23-406D2, complete sequence Length = 172817 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctaccc 122 ||||||||||||||||||||| Sbjct: 95527 cctcctcttcctcctctaccc 95507
>gb|BT016397.1| Zea mays clone Contig230 mRNA sequence Length = 1387 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 cacgccgccttcgccgcggcc 325 ||||||||||||||||||||| Sbjct: 457 cacgccgccttcgccgcggcc 477
>ref|XM_875892.1| PREDICTED: Bos taurus similar to cullin 2, transcript variant 4 (LOC535219), mRNA Length = 2927 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccgccgccgcccaccctcctc 108 ||||||||||||||||||||| Sbjct: 21 ccgccgccgcccaccctcctc 41
>ref|XM_875751.1| PREDICTED: Bos taurus similar to cullin 2, transcript variant 3 (LOC535219), mRNA Length = 2810 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccgccgccgcccaccctcctc 108 ||||||||||||||||||||| Sbjct: 21 ccgccgccgcccaccctcctc 41
>ref|XM_865292.1| PREDICTED: Bos taurus similar to cullin 2, transcript variant 2 (LOC535219), mRNA Length = 2927 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccgccgccgcccaccctcctc 108 ||||||||||||||||||||| Sbjct: 21 ccgccgccgcccaccctcctc 41
>gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0043H23, complete sequence Length = 134097 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tccccgccggctcacgcgccg 71 ||||||||||||||||||||| Sbjct: 80938 tccccgccggctcacgcgccg 80918
>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08, complete sequence Length = 152527 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tccccgccggctcacgcgccg 71 ||||||||||||||||||||| Sbjct: 116416 tccccgccggctcacgcgccg 116396
>ref|XM_532424.2| PREDICTED: Canis familiaris similar to Carboxypeptidase A1 precursor, transcript variant 1 (LOC475192), mRNA Length = 1370 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctct 118 ||||||||||||||||||||| Sbjct: 1293 ccaccctcctcttcctcctct 1313
>ref|XM_851827.1| PREDICTED: Canis familiaris similar to Carboxypeptidase A1 precursor, transcript variant 3 (LOC475192), mRNA Length = 1406 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctct 118 ||||||||||||||||||||| Sbjct: 1329 ccaccctcctcttcctcctct 1349
>ref|XM_851784.1| PREDICTED: Canis familiaris similar to Carboxypeptidase A1 precursor, transcript variant 2 (LOC475192), mRNA Length = 1258 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctct 118 ||||||||||||||||||||| Sbjct: 1181 ccaccctcctcttcctcctct 1201
>gb|AC092265.3| Homo sapiens chromosome 1 clone RP4-656G21, complete sequence Length = 129231 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 cccaccctcctcttcctcctc 117 ||||||||||||||||||||| Sbjct: 119301 cccaccctcctcttcctcctc 119321
>gb|AC113020.9| Mus musculus chromosome 16, clone RP23-186N8, complete sequence Length = 214853 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctaccc 122 ||||||||||||||||||||| Sbjct: 137506 cctcctcttcctcctctaccc 137526
>gb|AF533892.1| Mus musculus p63 (Trp63) gene, alternatively spliced, complete cds Length = 208158 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctaccc 122 ||||||||||||||||||||| Sbjct: 84111 cctcctcttcctcctctaccc 84131
>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0099J16, complete sequence Length = 133198 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 acgcacaccacctgttcgacg 383 ||||||||||||||||||||| Sbjct: 80362 acgcacaccacctgttcgacg 80382
>emb|AJ239048.1|OAN239048 Ornithorhynchus anatinus il-1 beta gene for interleukin-1 beta Length = 6556 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacccagcc 126 ||||||||||||||||| ||||||| Sbjct: 4977 cctcctcttcctcctctccccagcc 4953
>emb|AJ720784.1| Gallus gallus mRNA for hypothetical protein, clone 25j21 Length = 2965 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 caccctcctcttcctcctcta 119 ||||||||||||||||||||| Sbjct: 258 caccctcctcttcctcctcta 238
>gb|BC103348.1| Bos taurus cDNA clone IMAGE:7950261, containing frame-shift errors Length = 3227 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ccgccgccgcccaccctcctc 108 ||||||||||||||||||||| Sbjct: 53 ccgccgccgcccaccctcctc 73
>dbj|AK076338.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732444I19 product:lymphocyte antigen 6 complex, locus G, full insert sequence Length = 3008 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctaccc 122 ||||||||||||||||||||| Sbjct: 1453 cctcctcttcctcctctaccc 1433
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 acgcacaccacctgttcgacg 383 ||||||||||||||||||||| Sbjct: 6691053 acgcacaccacctgttcgacg 6691033 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ccccgcatccaccgccgccgccca 100 |||||| ||||||||||||||||| Sbjct: 7420306 ccccgcctccaccgccgccgccca 7420283
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 acgcacaccacctgttcgacg 383 ||||||||||||||||||||| Sbjct: 25924604 acgcacaccacctgttcgacg 25924584
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tccccgccggctcacgcgccg 71 ||||||||||||||||||||| Sbjct: 7378161 tccccgccggctcacgcgccg 7378141 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 ccaccgccgccgcccaccctcctcttcc 112 ||||||||||||||| || ||||||||| Sbjct: 13765634 ccaccgccgccgccccccgtcctcttcc 13765661
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 89 cgccgccgcccaccctcctcttcctcctc 117 |||||||| ||||| |||||||||||||| Sbjct: 39992132 cgccgccgtccaccttcctcttcctcctc 39992104 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ccgcatccaccgccgccgcc 98 |||||||||||||||||||| Sbjct: 30761858 ccgcatccaccgccgccgcc 30761877
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 89 cgccgccgcccaccctcctcttcctcctc 117 |||||||| ||||| |||||||||||||| Sbjct: 83583 cgccgccgtccaccttcctcttcctcctc 83555
>emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 in linkage group 6, complete sequence Length = 181060 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 cccaccctcctcttcctcctc 117 ||||||||||||||||||||| Sbjct: 50137 cccaccctcctcttcctcctc 50157
>dbj|AK100084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K05, full insert sequence Length = 2834 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 acgcacaccacctgttcgacg 383 ||||||||||||||||||||| Sbjct: 673 acgcacaccacctgttcgacg 693
>gb|AC007435.12|AC007435 Homo sapiens, clone 6_C_10, complete sequence Length = 178342 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 cccaccctcctcttcctcctc 117 ||||||||||||||||||||| Sbjct: 106172 cccaccctcctcttcctcctc 106152
>dbj|AP000336.2| Homo sapiens genomic DNA, chromosome 21 clone:CMP21-S588, complete sequence Length = 37459 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 gccgcccaccctcctcttcctcctc 117 ||||||||| ||||||||||||||| Sbjct: 7729 gccgcccactctcctcttcctcctc 7753
>dbj|AP001760.1| Homo sapiens genomic DNA, chromosome 21q, section 104/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 gccgcccaccctcctcttcctcctc 117 ||||||||| ||||||||||||||| Sbjct: 93205 gccgcccactctcctcttcctcctc 93229
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 tcttcctcctctacccagccg 127 ||||||||||||||||||||| Sbjct: 822492 tcttcctcctctacccagccg 822472
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 acgcacaccacctgttcgacg 383 ||||||||||||||||||||| Sbjct: 26243302 acgcacaccacctgttcgacg 26243282
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 acgcacaccacctgttcgacg 383 ||||||||||||||||||||| Sbjct: 6690928 acgcacaccacctgttcgacg 6690908 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ccccgcatccaccgccgccgccca 100 |||||| ||||||||||||||||| Sbjct: 7420185 ccccgcctccaccgccgccgccca 7420162
>emb|AL713939.6|CNS07YPL Oryza sativa chromosome 12, . BAC OJ1722_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 171861 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 acgcacaccacctgttcgacg 383 ||||||||||||||||||||| Sbjct: 109058 acgcacaccacctgttcgacg 109038
>gb|AC149214.5| Mus musculus BAC clone RP24-230G21 from 7, complete sequence Length = 151753 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctaccc 122 ||||||||||||||||||||| Sbjct: 26327 cctcctcttcctcctctaccc 26307
>gb|AC124593.4| Mus musculus BAC clone RP23-10D15 from 3, complete sequence Length = 187362 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctaccc 122 ||||||||||||||||||||| Sbjct: 139944 cctcctcttcctcctctaccc 139964
>emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on chromosome 2, complete sequence Length = 187541 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctctaccc 122 ||||||||||| ||||||||||||| Sbjct: 80769 ccaccctcctcctcctcctctaccc 80745
>dbj|AP000215.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter, Ter region, clone f27E1-T1136, segment 1/4, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 gccgcccaccctcctcttcctcctc 117 ||||||||| ||||||||||||||| Sbjct: 33746 gccgcccactctcctcttcctcctc 33770
>ref|NM_126145.2| Arabidopsis thaliana AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding AT5G67450 (AZF1) mRNA, complete cds Length = 1157 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 308 cctcctcttcctcctctacc 327
>gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosome 5, complete sequence Length = 189243 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 107412 cctcctcttcctcctctacc 107393
>gb|AC114993.18| Mus musculus chromosome 5, clone RP23-42D10, complete sequence Length = 208968 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 caccctcctcttcctcctct 118 |||||||||||||||||||| Sbjct: 127109 caccctcctcttcctcctct 127090
>ref|XM_528704.1| PREDICTED: Pan troglodytes similar to a disintegrin and metalloproteinase with thrombospondin motifs 9 isoform 1 preproprotein (LOC473333), mRNA Length = 7041 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 263 cctcctcttcctcctctacc 282
>ref|NM_197907.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0056G17.14), mRNA Length = 2585 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 2254 cctcctcttcctcctctacc 2235
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gccgccttcgccgcggccac 327 |||||||||||||||||||| Sbjct: 2327937 gccgccttcgccgcggccac 2327956
>ref|NM_191122.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1506 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ccgcatccaccgccgccgcc 98 |||||||||||||||||||| Sbjct: 126 ccgcatccaccgccgccgcc 145
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 ccctcctcttcctcctctacccag 124 ||||||||||||||||| |||||| Sbjct: 860113 ccctcctcttcctcctcgacccag 860090
>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence Length = 158864 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ctcctcttcctcctctaccc 122 |||||||||||||||||||| Sbjct: 23998 ctcctcttcctcctctaccc 24017
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230137 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 161251 ccaccctcctcttcctcctc 161270
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cgccgccttcgccgcggcca 326 |||||||||||||||||||| Sbjct: 1906732 cgccgccttcgccgcggcca 1906751
>ref|NM_182920.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 9 (ADAMTS9), mRNA Length = 7335 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 295 cctcctcttcctcctctacc 314
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete sequence Length = 206418 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ctcctcttcctcctctaccc 122 |||||||||||||||||||| Sbjct: 71076 ctcctcttcctcctctaccc 71095
>ref|XM_953945.1| Neurospora crassa OR74A hypothetical protein (NCU07525.1) partial mRNA Length = 2832 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ccctcctcttcctcctctac 120 |||||||||||||||||||| Sbjct: 2080 ccctcctcttcctcctctac 2099
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 ccaccgccgccgcccaccctcctcttcc 112 ||||||||||||||| || ||||||||| Sbjct: 31706 ccaccgccgccgccccccgtcctcttcc 31733
>ref|XM_327810.1| Neurospora crassa OR74A hypothetical protein (NCU07525.1) partial mRNA Length = 2832 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ccctcctcttcctcctctac 120 |||||||||||||||||||| Sbjct: 2080 ccctcctcttcctcctctac 2099
>gb|AC106595.9| Rattus norvegicus 7 BAC CH230-237N20 (Children's Hospital Oakland Research Institute) complete sequence Length = 214961 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 42958 cctcctcttcctcctctacc 42977
>gb|AC131728.4| Mus musculus BAC clone RP23-122G5 from chromosome 5, complete sequence Length = 211796 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 204095 cctcctcttcctcctctacc 204114
>ref|NM_133817.1| Mus musculus zinc finger protein 451 (Zfp451), mRNA Length = 3651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 1772 cctcctcttcctcctctacc 1753
>gb|AC164402.3| Mus musculus chromosome 15, clone RP23-463G20, complete sequence Length = 196916 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 19088 cctcctcttcctcctctacc 19107
>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01, complete sequence Length = 143263 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 ccaccgccgccgcccaccctcctcttcc 112 ||||||||||||||| || ||||||||| Sbjct: 136693 ccaccgccgccgccccccgtcctcttcc 136720
>gb|AY523976.1|AY523972S5 Azospirillum brasilense plasmid 90 MDa, partial sequence Length = 32896 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cccacgccgccttcgccgcg 322 |||||||||||||||||||| Sbjct: 20309 cccacgccgccttcgccgcg 20328
>gb|BC036770.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 9, mRNA (cDNA clone IMAGE:5760026), with apparent retained intron Length = 2912 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 596 cctcctcttcctcctctacc 615
>gb|AC163668.5| Mus musculus BAC clone RP23-32P22 from chromosome 1, complete sequence Length = 222156 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 116863 cctcctcttcctcctctacc 116844
>gb|AC144825.2| Danio rerio clone CH211-178A5, complete sequence Length = 53370 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 11528 ccaccctcctcttcctcctc 11509
>gb|BC062154.1| Mus musculus zinc finger protein 451, mRNA (cDNA clone MGC:70050 IMAGE:6331597), complete cds Length = 3597 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 1491 cctcctcttcctcctctacc 1472
>gb|BC043685.1| Mus musculus zinc finger protein 451, mRNA (cDNA clone IMAGE:5135400), partial cds Length = 2091 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 189 cctcctcttcctcctctacc 170
>gb|BC026587.1| Mus musculus zinc finger protein 451, mRNA (cDNA clone IMAGE:4972837), partial cds Length = 2013 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 117 cctcctcttcctcctctacc 98
>emb|BX323566.13| Zebrafish DNA sequence from clone DKEYP-67A8 in linkage group 2, complete sequence Length = 108226 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 91735 ccaccctcctcttcctcctc 91754
>emb|CR407585.14| Zebrafish DNA sequence from clone CH211-141O18 in linkage group 6, complete sequence Length = 164483 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 146711 ccaccctcctcttcctcctc 146692
>emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 in linkage group 8, complete sequence Length = 195545 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 60535 ccaccctcctcttcctcctc 60516
>ref|XM_566651.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA03290) partial mRNA Length = 1894 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 ccctcctcttcctcctctacccag 124 ||||||||||||||||| |||||| Sbjct: 1070 ccctcctcttcctcctcgacccag 1093
>gb|AC124579.3| Mus musculus BAC clone RP23-86P2 from chromosome 13, complete sequence Length = 167801 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 31070 cctcctcttcctcctctacc 31089
>ref|XM_801438.1| Trypanosoma cruzi strain CL Brener enoyl-CoA hydratase/isomerase family protein (Tc00.1047053510997.40) partial mRNA Length = 831 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgccgccttcgccgcggcca 326 |||||||||||||||||||| Sbjct: 687 cgccgccttcgccgcggcca 668
>gb|AC146680.3| Gasterosteus aculeatus clone CH213-10I3, complete sequence Length = 214256 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 138480 ccaccctcctcttcctcctc 138499
>ref|XM_809039.1| Trypanosoma cruzi strain CL Brener enoyl-CoA hydratase/isomerase family protein (Tc00.1047053506959.40) partial mRNA Length = 831 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgccgccttcgccgcggcca 326 |||||||||||||||||||| Sbjct: 687 cgccgccttcgccgcggcca 668
>gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, complete sequence Length = 229072 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 52288 ccaccctcctcttcctcctc 52307
>emb|CR376861.6| Zebrafish DNA sequence from clone CH211-193L9 in linkage group 14, complete sequence Length = 38313 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 24156 ccaccctcctcttcctcctc 24175
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ctccccacgccgccttcgcc 319 |||||||||||||||||||| Sbjct: 78872 ctccccacgccgccttcgcc 78853
>gb|AC005535.2| Homo sapiens PAC clone RP5-1168M19 from 7, complete sequence Length = 157813 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ctcctcttcctcctctaccc 122 |||||||||||||||||||| Sbjct: 132623 ctcctcttcctcctctaccc 132642
>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research Institute) complete sequence Length = 184149 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 144792 cctcctcttcctcctctacc 144773 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 144738 cctcctcttcctcctctacc 144719
>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence Length = 156190 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 46245 cctcctcttcctcctctacc 46264
>emb|BX927062.11| Zebrafish DNA sequence from clone CH211-227N20 in linkage group 13, complete sequence Length = 154186 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 48476 ccaccctcctcttcctcctc 48495
>emb|BX908804.17| Zebrafish DNA sequence from clone CH211-163M16 in linkage group 3, complete sequence Length = 162642 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 92179 ccaccctcctcttcctcctc 92160
>emb|AL683813.10| Human DNA sequence from clone RP11-1114A5 on chromosome X Contains the 5' end of the ARHGEF6 gene for Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6, a ribosomal protein L7 (RPL7) pseudogene, a RAN member RAS oncogene family pseudogene, a novel gene, the RNMX gene for RNA binding motif protein (X chromosome), the 5' end of a novel gene and two CpG islands, complete sequence Length = 148654 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 143626 cctcctcttcctcctctacc 143645
>ref|XM_788427.1| PREDICTED: Strongylocentrotus purpuratus similar to nucleoporin 153 (LOC588760), mRNA Length = 5100 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 2024 ccaccctcctcttcctcctc 2005
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 181013 cctcctcttcctcctctacc 181032 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 180959 cctcctcttcctcctctacc 180978
>gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 221396 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 caccctcctcttcctcctct 118 |||||||||||||||||||| Sbjct: 14129 caccctcctcttcctcctct 14110
>emb|AL009178.4|HS431P23 Human DNA sequence from clone RP3-431P23 on chromosome 6q27 Contains the 5' end of the MLLT4 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog) translocated gene protein 4 (AF-6, Afadin, ALL-1 fusion partner), genes HGC6.4 and HGC6.2, a serine palmitoyltransferase long chain base subunit 2 (SPTLC2) (LCB2) pseudogene and two CpG islands, complete sequence Length = 147971 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 123943 ccaccctcctcttcctcctc 123962
>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8, complete sequence Length = 175706 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 66325 ccaccctcctcttcctcctc 66344
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cgccgccttcgccgcggcca 326 |||||||||||||||||||| Sbjct: 111759 cgccgccttcgccgcggcca 111778
>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete sequence Length = 220771 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 152152 cctcctcttcctcctctacc 152171
>gb|AC018358.20| Homo sapiens 3 BAC RP11-333B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 105762 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacccagc 125 ||||||| |||||||||||||||| Sbjct: 14947 cctcctcctcctcctctacccagc 14970
>emb|AL603842.9| Mouse DNA sequence from clone RP23-100P23 on chromosome 11 Contains the 5' end of a novel gene, three novel genes, the Slc6a4 gene for solute carrier family 6 (neurotransmitter transporter, serotonin) member 4, the Blmh gene for bleomycin hydrolase and three CpG islands, complete sequence Length = 229289 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 64584 ccaccctcctcttcctcctc 64603
>emb|CR847859.13| Zebrafish DNA sequence from clone DKEYP-2F4 in linkage group 14, complete sequence Length = 124837 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 30819 ccaccctcctcttcctcctc 30800
>emb|BX640595.13| Zebrafish DNA sequence from clone CH211-117K11 in linkage group 2, complete sequence Length = 121429 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 caccctcctcttcctcctct 118 |||||||||||||||||||| Sbjct: 91946 caccctcctcttcctcctct 91965
>emb|AL591843.14| Mouse DNA sequence from clone RP23-351I6 on chromosome 13 Contains the Prl gene for prolactin and the Csh1 gene for chorionic somatomammotropin hormone 1, complete sequence Length = 94890 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 34348 cctcctcttcctcctctacc 34329
>emb|AL845362.4| Zebrafish DNA sequence from clone CH211-142H2 in linkage group 2 Contains a putative novel gene, a novel gene similar to PTF1 (pancreas transcription factor 1, subunit p48), a novel gene similar to DLGAP1 (discs, large (Drosophila) homolog-associated protein 1) and two CpG islands, complete sequence Length = 161465 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 150168 ccaccctcctcttcctcctc 150149
>emb|BX324166.8| Zebrafish DNA sequence from clone DKEY-66A8 in linkage group 6, complete sequence Length = 215450 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 gccgcccaccctcctcttcctcct 116 |||| ||||||||||||||||||| Sbjct: 119220 gccggccaccctcctcttcctcct 119243
>gb|AC157919.5| Mus musculus chromosome 3, clone RP23-131B7, complete sequence Length = 190453 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctctacc 121 ||||||||| |||||||||||||| Sbjct: 27167 ccaccctccccttcctcctctacc 27190
>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence Length = 201917 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 129816 cctcctcttcctcctctacc 129797
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 759405 cctcctcttcctcctctacc 759386
>gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 genomic sequence, complete sequence Length = 154696 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 catccaccgccgccgcccaccctc 105 ||||||||||||||| |||||||| Sbjct: 115087 catccaccgccgccggccaccctc 115110
>ref|XM_688149.1| PREDICTED: Danio rerio similar to lipoxygenase homology domains 1 (LOC564819), mRNA Length = 4203 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 2657 ccaccctcctcttcctcctc 2638
>ref|XM_683239.1| PREDICTED: Danio rerio similar to zinc finger protein 91 (HPF7, HTF10) (LOC559851), mRNA Length = 2136 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 caccctcctcttcctcctct 118 |||||||||||||||||||| Sbjct: 31 caccctcctcttcctcctct 12
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 22788 cctcctcttcctcctctacc 22807
>emb|BX000999.9| Zebrafish DNA sequence from clone DKEY-77F5 in linkage group 15, complete sequence Length = 200989 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 162458 ccaccctcctcttcctcctc 162439
>gb|AC161252.2| Mus musculus BAC clone RP24-167E3 from chromosome 13, complete sequence Length = 158432 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 99770 cctcctcttcctcctctacc 99751
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcttcatcacgctggcgctg 178 |||||||||||||||||||| Sbjct: 1056081 tcttcatcacgctggcgctg 1056100
>gb|AC121099.8| Mus musculus chromosome 3, clone RP24-501F21, complete sequence Length = 157318 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctctacc 121 ||||||||| |||||||||||||| Sbjct: 35581 ccaccctccccttcctcctctacc 35558
>gb|AY817047.1| Haliaeetus albicilla clone Hal 08 microsatellite sequence Length = 154 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 caccctcctcttcctcctct 118 |||||||||||||||||||| Sbjct: 144 caccctcctcttcctcctct 125
>dbj|AK030088.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932441A15 product:hypothetical Zinc finger, C2H2 type containing protein, full insert sequence Length = 3651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 1772 cctcctcttcctcctctacc 1753
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ctccccacgccgccttcgcc 319 |||||||||||||||||||| Sbjct: 21265398 ctccccacgccgccttcgcc 21265379
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 22568119 cctcctcttcctcctctacc 22568138 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 catccaccgccgccgcccaccctc 105 ||||||||||||||| |||||||| Sbjct: 10956977 catccaccgccgccggccaccctc 10957000
>gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) and D5Ertd655e genes, complete cds; ASR2 (Asr2) gene, complete cds, alternatively spliced; TRIP6 (Trip6), CIP1 (Cip1), EPHB4 (Ephb4), ZAN (Zan), EPO (Epo), RPP20 (Rpp20), PERQ1 (Perq1), GNB2 (Gnb2), and BAF53B (Baf53b) genes, complete cds; and TFR2 (Tfr2) gene, partial cds Length = 296820 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccctcctcttcctcctctac 120 |||||||||||||||||||| Sbjct: 28300 ccctcctcttcctcctctac 28281
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 gacgcacaccacctgttcgacgta 385 ||||| |||||||||||||||||| Sbjct: 15710765 gacgcccaccacctgttcgacgta 15710742
>gb|AF488803.1| Homo sapiens a disintegrin-like and metalloprotease with thrombospondin type 1 motifs 9B (ADAMTS9) mRNA, complete cds Length = 5993 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 295 cctcctcttcctcctctacc 314
>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0021A09 Length = 127973 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ccgcatccaccgccgccgcc 98 |||||||||||||||||||| Sbjct: 51133 ccgcatccaccgccgccgcc 51152
>ref|XM_228305.3| PREDICTED: Rattus norvegicus SEC63-like (S. cerevisiae) (predicted) (Sec63_predicted), mRNA Length = 2595 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 2342 ccaccctcctcttcctcctc 2323
>gb|BT003064.1| Arabidopsis thaliana At5g67450 gene, complete cds Length = 738 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 238 cctcctcttcctcctctacc 257
>gb|AF525022.1| Arabidopsis thaliana zinc finger protein gene, complete cds Length = 1800 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 668 cctcctcttcctcctctacc 687
>gb|AY123328.1| Arabidopsis thaliana zinc finger protein OZAKGYO (OZAKGYO) gene, complete cds Length = 3134 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 1529 cctcctcttcctcctctacc 1548
>gb|AF261918.1|AF261918 Homo sapiens disintegrin metalloproteinase with thrombospondin repeats (ADAMTS9) mRNA, complete cds Length = 3674 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 275 cctcctcttcctcctctacc 294
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 acgccgccttcgccgcggcc 325 |||||||||||||||||||| Sbjct: 6155563 acgccgccttcgccgcggcc 6155544
>emb|BX000984.7| Zebrafish DNA sequence from clone CH211-157C7, complete sequence Length = 160029 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 63042 ccaccctcctcttcctcctc 63023
>emb|BX000444.11| Zebrafish DNA sequence from clone RP71-31C2 in linkage group 9, complete sequence Length = 128377 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 76959 ccaccctcctcttcctcctc 76940
>emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in linkage group 19, complete sequence Length = 200523 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 100957 ccaccctcctcttcctcctc 100938
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 gacgcacaccacctgttcgacgta 385 ||||| |||||||||||||||||| Sbjct: 119452 gacgcccaccacctgttcgacgta 119429
>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence Length = 199260 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 98952 cctcctcttcctcctctacc 98971
>dbj|AB030731.1| Arabidopsis thaliana AZF1 gene for Cys2/His2-type zinc finger protein 1, partial cds Length = 735 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 238 cctcctcttcctcctctacc 257
>dbj|AB007645.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8K14 Length = 72698 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 71506 cctcctcttcctcctctacc 71487
>dbj|AK102587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F01, full insert sequence Length = 2714 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 2383 cctcctcttcctcctctacc 2364
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 76 gccccgcatccaccgccgccgcccaccc 103 |||||||||||| ||||||||| ||||| Sbjct: 133814 gccccgcatccagcgccgccgcgcaccc 133787
>emb|BX005458.19| Zebrafish DNA sequence from clone CH211-173L10 in linkage group 18, complete sequence Length = 140289 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 62841 ccaccctcctcttcctcctc 62822
>emb|AL954312.16| Zebrafish DNA sequence from clone CH211-220P9 in linkage group 15, complete sequence Length = 231100 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 124138 ccaccctcctcttcctcctc 124119
>gb|AC113281.15| Mus musculus chromosome 5, clone RP23-393G8, complete sequence Length = 197920 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 20317 cctcctcttcctcctctacc 20298
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 76 gccccgcatccaccgccgccgcccaccc 103 |||||||||||| ||||||||| ||||| Sbjct: 133814 gccccgcatccagcgccgccgcgcaccc 133787
>emb|CT009703.8| Zebrafish DNA sequence from clone DKEYP-32B7 in linkage group 12, complete sequence Length = 129251 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 89306 ccaccctcctcttcctcctc 89287
>emb|CT485668.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 100390 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 49941 cctcctcttcctcctctacc 49960
>gb|AF078035.1|AF078035 Homo sapiens translation initiation factor IF2 mRNA, complete cds Length = 3900 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccctcctcttcctcctctac 120 |||||||||||||||||||| Sbjct: 1781 ccctcctcttcctcctctac 1762
>gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, complete sequence Length = 207069 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 205205 cctcctcttcctcctctacc 205224
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 22580587 cctcctcttcctcctctacc 22580606 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 catccaccgccgccgcccaccctc 105 ||||||||||||||| |||||||| Sbjct: 10963017 catccaccgccgccggccaccctc 10963040
>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 98782 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ccccgcatccaccgccgccgccca 100 |||||| ||||||||||||||||| Sbjct: 9982 ccccgcctccaccgccgccgccca 9959
>emb|AL929514.7| Zebrafish DNA sequence from clone CH211-187D9, complete sequence Length = 174473 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 150515 ccaccctcctcttcctcctc 150534
>gb|AC150682.2| Mus musculus BAC clone RP24-210N1 from 5, complete sequence Length = 164951 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccctcctcttcctcctctac 120 |||||||||||||||||||| Sbjct: 36941 ccctcctcttcctcctctac 36922
>emb|CR388001.36| Zebrafish DNA sequence from clone CH211-279I17 in linkage group 22, complete sequence Length = 123028 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 68814 ccaccctcctcttcctcctc 68833
>emb|AL805903.12| Mouse DNA sequence from clone RP23-464N23 on chromosome 4, complete sequence Length = 136895 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 133025 cctcctcttcctcctctacc 133006
>gb|AC144818.4| Mus musculus BAC clone RP23-97O1 from chromosome 5, complete sequence Length = 213322 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cctcctcttcctcctctacc 121 |||||||||||||||||||| Sbjct: 22089 cctcctcttcctcctctacc 22108
>gb|U10016.1|TRU10016 Trichoderma reesei QM9414 protein kinase C (pkc1) gene, complete cds Length = 5131 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 cctggtctccccacgccgcc 313 |||||||||||||||||||| Sbjct: 980 cctggtctccccacgccgcc 961
>emb|AL713881.1|CNS07YOX Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 527G2 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 143241 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 18242 ccaccctcctcttcctcctc 18223
>emb|AL732590.7| Mouse DNA sequence from clone RP23-464C2 on chromosome 2, complete sequence Length = 199056 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccaccctcctcttcctcctctacc 121 ||||| |||||||||||||||||| Sbjct: 122764 ccaccttcctcttcctcctctacc 122787
>dbj|AB016897.1| Homo sapiens genomic DNA, chromosome 6q27, complete sequence Length = 331211 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccaccctcctcttcctcctc 117 |||||||||||||||||||| Sbjct: 21741 ccaccctcctcttcctcctc 21722 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,246,144 Number of Sequences: 3902068 Number of extensions: 3246144 Number of successful extensions: 146068 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 144161 Number of HSP's gapped (non-prelim): 1907 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
