ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DRE2D_ARATH (Q9LQZ2) Putative dehydration-responsive element-bin... 32 0.61
2PERT_PIG (P09933) Thyroid peroxidase precursor (EC 1.11.1.8) (TPO) 31 1.3
3CF155_HUMAN (Q9H8W2) Protein C6orf155 31 1.8
4LRC10_HUMAN (Q5BKY1) Leucine-rich repeat-containing protein 10 31 1.8
5FBLI1_PONPY (Q5REN1) Filamin-binding LIM protein 1 28 8.7
6AOFB_PONPY (Q5RE98) Amine oxidase [flavin-containing] B (EC 1.4.... 28 8.7
7AOFB_HUMAN (P27338) Amine oxidase [flavin-containing] B (EC 1.4.... 28 8.7
8AOFB_CANFA (Q7YRB7) Amine oxidase [flavin-containing] B (EC 1.4.... 28 8.7
9AOFB_BOVIN (P56560) Amine oxidase [flavin-containing] B (EC 1.4.... 28 8.7
10FBLI1_HUMAN (Q8WUP2) Filamin-binding LIM protein 1 (Filamin-bind... 28 8.7

>DRE2D_ARATH (Q9LQZ2) Putative dehydration-responsive element-binding protein 2D|
           (DREB2D protein)
          Length = 206

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = -1

Query: 453 RETG*AARLWLASASGTRTAANAEAERGKPCGVPSAHRNSWRARRGRPRSAPWTSPVART 274
           RE    ARLWL +   +R AA A     +    P AH N   + R  P++A  +SP ++T
Sbjct: 58  REPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPESLRSYPKTA--SSPASQT 115



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>PERT_PIG (P09933) Thyroid peroxidase precursor (EC 1.11.1.8) (TPO)|
          Length = 926

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = -1

Query: 432 RLWLASASGTRTAANAEAERGKPCGVPSAHRNSWRARRGRPRSAPWTSPVART 274
           RL++ S SGT   A+   +RG+  G+P    N WR   G  R   W    A T
Sbjct: 561 RLFVLSNSGTLDLASINLQRGRDHGLPG--YNEWREFCGLSRLETWADLSAAT 611



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>CF155_HUMAN (Q9H8W2) Protein C6orf155|
          Length = 130

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -1

Query: 426 WLASASGTRTAANAEAERGKPCGVPSAHRNSWRARRGRPRSAPWTSPVAR 277
           W A   G R    A  E GK CG  +  R++  AR  RPRS+  T    R
Sbjct: 42  WPAKEVGPRPQIPATCEPGKVCGASAGRRDA--ARPSRPRSSRVTFSTRR 89



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>LRC10_HUMAN (Q5BKY1) Leucine-rich repeat-containing protein 10|
          Length = 277

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +2

Query: 296 HGALRGLPRLA---RQLFRWAEGTPHGFPRSASAFAAV 400
           H   R  P++A   R++ RWAE TP   PR A  +A V
Sbjct: 221 HNPCRNAPKVAKGVRRVGRWAEETPEPDPRKARRYALV 258



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>FBLI1_PONPY (Q5REN1) Filamin-binding LIM protein 1|
          Length = 375

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 423 LASASGTRTAANAEAERGKPCGVPSAHRNSWRARRGRPRSAPWTSP 286
           +A A   R A   EA RG+P   P+  +       GRP  +PWT P
Sbjct: 24  VAMAEEVRQAV-CEARRGRPWEAPAPMKTPEAGLEGRP--SPWTPP 66



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>AOFB_PONPY (Q5RE98) Amine oxidase [flavin-containing] B (EC 1.4.3.4)|
           (Monoamine oxidase type B) (MAO-B)
          Length = 519

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
 Frame = -1

Query: 345 HRNSWRAR----RGRPRSAPWTSPVARTW 271
           H N WR      R  P  APW +P+A  W
Sbjct: 114 HNNFWRTMDDMGREIPSDAPWKAPLAEEW 142



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>AOFB_HUMAN (P27338) Amine oxidase [flavin-containing] B (EC 1.4.3.4)|
           (Monoamine oxidase type B) (MAO-B)
          Length = 519

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
 Frame = -1

Query: 345 HRNSWRAR----RGRPRSAPWTSPVARTW 271
           H N WR      R  P  APW +P+A  W
Sbjct: 114 HNNFWRTMDDMGREIPSDAPWKAPLAEEW 142



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>AOFB_CANFA (Q7YRB7) Amine oxidase [flavin-containing] B (EC 1.4.3.4)|
           (Monoamine oxidase type B) (MAO-B)
          Length = 519

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
 Frame = -1

Query: 345 HRNSWRAR----RGRPRSAPWTSPVARTW 271
           H N WR      R  P  APW +P+A  W
Sbjct: 114 HNNLWRTMDDMGREIPSDAPWKAPLAEEW 142



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>AOFB_BOVIN (P56560) Amine oxidase [flavin-containing] B (EC 1.4.3.4)|
           (Monoamine oxidase type B) (MAO-B)
          Length = 519

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
 Frame = -1

Query: 345 HRNSWRAR----RGRPRSAPWTSPVARTW 271
           H N WR      R  P  APW +P+A  W
Sbjct: 114 HNNLWRTMDDMGREIPSDAPWKAPLAEQW 142



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>FBLI1_HUMAN (Q8WUP2) Filamin-binding LIM protein 1 (Filamin-binding LIM protein|
           1) (FBLP-1) (Mitogen-inducible 2-interacting protein)
           (MIG2-interacting protein) (Migfilin)
          Length = 373

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 393 ANAEAERGKPCGVPSAHRNSWRARRGRPRSAPWTSP 286
           A  EA RG+P   P+  +       GRP  +PWT+P
Sbjct: 33  AVCEARRGRPWEAPAPMKTPEAGLAGRP--SPWTTP 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,379,366
Number of Sequences: 219361
Number of extensions: 701987
Number of successful extensions: 2117
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2112
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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