ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 147 4e-36
2LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 86 2e-17
3LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 80 2e-15
4LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 77 1e-14
5LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 68 6e-12
6LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 67 8e-12
7LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12) 58 5e-09
8LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 54 9e-08
9LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 50 2e-06
10LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 40 0.001
11LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 40 0.001
12LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2) 36 0.025
13TRUA_GEOKA (Q5L3Q7) tRNA pseudouridine synthase A (EC 5.4.99.12)... 31 0.80
14ZN205_HUMAN (O95201) Zinc finger protein 205 (Zinc finger protei... 30 1.0
15ZN449_HUMAN (Q6P9G9) Zinc finger protein 449 (Zinc finger and SC... 30 1.4
16AT132_MOUSE (Q9CTG6) Probable cation-transporting ATPase 13A2 (E... 30 1.4
17DNAA_BIFLO (Q8G6K0) Chromosomal replication initiator protein dnaA 30 1.8
18ZFP13_MOUSE (P10754) Zinc finger protein 13 (Zfp-13) (Krox-8 pro... 29 2.3
19GATA_THEMA (Q9X0Z9) Glutamyl-tRNA(Gln) amidotransferase subunit ... 28 4.0
20ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2) 28 4.0
21UVRA_BRUSU (Q8G0I9) UvrABC system protein A (UvrA protein) (Exci... 28 5.2
22UVRA_BRUME (Q8YHC4) UvrABC system protein A (UvrA protein) (Exci... 28 5.2
23UVRA_BRUAB (P0C0Z2) UvrABC system protein A (UvrA protein) (Exci... 28 5.2
24UVRA_BRUA2 (Q2YPX5) UvrABC system protein A (UvrA protein) (Exci... 28 5.2
25MT2_CALSI (P55950) Metallothionein-2B (MT-2B) (Metallothionein-I... 28 5.2
26ARI2_HUMAN (O95376) Protein ariadne-2 homolog (ARI-2) (Triad1 pr... 28 5.2
27SN1L2_MOUSE (Q8CFH6) Serine/threonine-protein kinase SNF1-like k... 28 5.2
28PML_MOUSE (Q60953) Probable transcription factor PML 28 5.2
29UVRA_RHILO (Q98M36) UvrABC system protein A (UvrA protein) (Exci... 28 5.2
30SUHW_DROVI (Q08876) Protein suppressor of hairy wing 28 5.2
31ARI2_MOUSE (Q9Z1K6) Protein ariadne-2 homolog (ARI-2) (Triad1 pr... 28 5.2
32MT_ASTFL (P55951) Metallothionein (MT) 28 6.8
33ZNF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96) 28 6.8
34IBRD1_HUMAN (Q8TC41) IBR domain-containing protein 1 27 8.9
35ZCHC4_XENTR (Q66IH9) Zinc finger CCHC domain-containing protein 4 27 8.9
36LIPA2_PROMP (Q7V0Z8) Lipoyl synthase 2 (EC 2.8.1.-) (Lipoic acid... 27 8.9
37SP5_MOUSE (Q9JHX2) Transcription factor Sp5 27 8.9

>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score =  147 bits (372), Expect = 4e-36
 Identities = 72/92 (78%), Positives = 79/92 (85%)
 Frame = +2

Query: 131 MLLHGLVDRLTGKNKEAWKEGKIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSF 310
           M + G  DRLTG+NKEAWKEG+I GTAVLVK DVL LGDFHASLLDGVH ILG  +GV+F
Sbjct: 1   MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60

Query: 311 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTMK 406
           RLVSATA DP NG RGK+GKPAHLEE+VVTMK
Sbjct: 61  RLVSATARDPSNGGRGKLGKPAHLEELVVTMK 92



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>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 46/91 (50%), Positives = 64/91 (70%)
 Frame = +2

Query: 131 MLLHGLVDRLTGKNKEAWKEGKIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSF 310
           MLL GL+D LTG NK A    ++ GT VL++ +VLDL DF A+++DG+ + LGK  GV+ 
Sbjct: 1   MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGK--GVTC 54

Query: 311 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTM 403
           +L+S+TA D  NG RGKVG  A LE+ V ++
Sbjct: 55  QLISSTAVDQDNGGRGKVGAEAELEQWVTSL 85



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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 40/89 (44%), Positives = 65/89 (73%)
 Frame = +2

Query: 134 LLHGLVDRLTGKNKEAWKEGKIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 313
           +L G++D +TG +K++    ++ GT VL++ +VLDL DF A+++DG+ + LGK  GV+ +
Sbjct: 1   MLGGIIDTITGSSKQS----RLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGK--GVTCQ 54

Query: 314 LVSATAPDPQNGSRGKVGKPAHLEEMVVT 400
           L+S+TA DP NG+RGKVG  A LE+ + +
Sbjct: 55  LISSTAVDPNNGNRGKVGAEASLEQWLTS 83



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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 41/86 (47%), Positives = 57/86 (66%)
 Frame = +2

Query: 146 LVDRLTGKNKEAWKEGKIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSA 325
           L D LTG   E   + K+ GT VL+K +VLD  DF+AS LD +H+ LG    ++ RLVS+
Sbjct: 5   LRDLLTGGGNETTTK-KVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNK--ITLRLVSS 61

Query: 326 TAPDPQNGSRGKVGKPAHLEEMVVTM 403
              D +NGS+GK+GK AHLE+ + T+
Sbjct: 62  DVTDSENGSKGKLGKAAHLEDWITTI 87



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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 34/90 (37%), Positives = 60/90 (66%)
 Frame = +2

Query: 134 LLHGLVDRLTGKNKEAWKEGKIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 313
           +L G++  LTG      K  ++ G+ VL++ + LD+ DF A+++DG+ + LG+  GV+ +
Sbjct: 1   MLGGIIGGLTGN-----KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGR--GVTCQ 53

Query: 314 LVSATAPDPQNGSRGKVGKPAHLEEMVVTM 403
           LVS++  DP NG+RG+VG  A LE+ + ++
Sbjct: 54  LVSSSLVDPNNGNRGRVGTEASLEQWLTSL 83



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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 41/85 (48%), Positives = 53/85 (62%)
 Frame = +2

Query: 134 LLHGLVDRLTGKNKEAWKEGKIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 313
           +L GL D+LTGKN       KI G AVL+   +LD  DF ASLLD VH++ G  + ++ +
Sbjct: 1   MLGGLKDKLTGKNGN-----KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFG--NSITCQ 53

Query: 314 LVSATAPDPQNGSRGKVGKPAHLEE 388
           LVSAT  D  N  RG VG  A+LE+
Sbjct: 54  LVSATVADQNNEGRGIVGSEANLEQ 78



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>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 34/90 (37%), Positives = 53/90 (58%)
 Frame = +2

Query: 134 LLHGLVDRLTGKNKEAWKEGKIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 313
           +L  LV  L G + ++    K+ GT V++K + LD  D   SL D + + LG+   VSF+
Sbjct: 1   MLGQLVGGLIGGHHDS---KKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQK--VSFQ 55

Query: 314 LVSATAPDPQNGSRGKVGKPAHLEEMVVTM 403
           L+S+   DP NG +GK   PA+LE  ++T+
Sbjct: 56  LISSVQSDPANGLQGKHSNPAYLENFLLTL 85



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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 28/70 (40%), Positives = 42/70 (60%)
 Frame = +2

Query: 194 KIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSATAPDPQNGSRGKVGKP 373
           K+ GT V++  +VLD  D   SL   +  +LG+   VSF+L+S+   DP NG +GK   P
Sbjct: 18  KVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQK--VSFQLISSVQGDPTNGLQGKHSNP 75

Query: 374 AHLEEMVVTM 403
           A+LE  + T+
Sbjct: 76  AYLENSLFTL 85



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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 31/85 (36%), Positives = 50/85 (58%)
 Frame = +2

Query: 131 MLLHGLVDRLTGKNKEAWKEGKIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSF 310
           M L G+VD + GK+       K+ G  +L+K +VLD  +  AS++DG+  +LG+   VS 
Sbjct: 1   MSLGGIVDAILGKDDRP----KVKGRVILMKKNVLDFINIGASVVDGISDLLGQK--VSI 54

Query: 311 RLVSATAPDPQNGSRGKVGKPAHLE 385
           +L+S +     +G  GK+  PA+LE
Sbjct: 55  QLISGSV--NYDGLEGKLSNPAYLE 77



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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
 Frame = +2

Query: 194 KIWGTAVLVKSDVLDLG-------------DFHASLLDGVHKILGKDDGVSFRLVSATAP 334
           KI GT VL++ +VLD+              D   S +D +   LG+   VS +L+SAT P
Sbjct: 14  KIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRS--VSLQLISATKP 71

Query: 335 DPQNGSRGKVGKPAHLEEMVVTM 403
           D     +GK+GK   LE ++ ++
Sbjct: 72  DATG--KGKLGKATFLEGIISSL 92



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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 18/91 (19%)
 Frame = +2

Query: 185 KEGKIWGTAVLVKSDVLDL--------GDFH----------ASLLDGVHKILGKDDGVSF 310
           K  KI GT VL++ +VLD         G+ H           S LDG+   LG+   VS 
Sbjct: 11  KGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGR--SVSL 68

Query: 311 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTM 403
           +L+SAT  D  NG +GKVGK   LE ++ ++
Sbjct: 69  QLISATKSD-ANG-KGKVGKDTFLEGVLASL 97



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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
 Frame = +2

Query: 194 KIWGTAVLVKSDVLDLGDFH------------------ASLLDGVHKILGKDDGVSFRLV 319
           KI GT VL++ +VLD                        S LD +   LG+   V+ +L+
Sbjct: 18  KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRS--VALQLI 75

Query: 320 SATAPDPQNGSRGKVGKPAHLEEMVVTM 403
           SAT P   NG +GKVGK   LE ++V++
Sbjct: 76  SATKP-LANG-KGKVGKDTFLEGIIVSL 101



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>TRUA_GEOKA (Q5L3Q7) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 258

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 2/113 (1%)
 Frame = +2

Query: 2   PYHHHCPPCAKCISKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLHG--LVDRLTGKNK 175
           PY  H     + +    GTH   S CSA   +  R R   R E+   G  L  R  G   
Sbjct: 134 PYSLHISAMNEALRLLHGTHDFTSFCSAKTSIEDRVRTMYRAEVKADGPMLEFRFVG--- 190

Query: 176 EAWKEGKIWGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSATAP 334
                G ++    ++   VL++G    S  D    +  KD     RL   TAP
Sbjct: 191 ----SGFLYNMVRIIVGTVLEIGQGKRSPADISTLLAAKDR----RLAGPTAP 235



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>ZN205_HUMAN (O95201) Zinc finger protein 205 (Zinc finger protein 210)|
          Length = 504

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +2

Query: 11  HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 142
           H CP CAKC ++ +   TH R  +     PC  C     +R  ++ H
Sbjct: 370 HKCPICAKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 416



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>ZN449_HUMAN (Q6P9G9) Zinc finger protein 449 (Zinc finger and SCAN|
           domain-containing protein 19)
          Length = 518

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +2

Query: 11  HHCPPCAKCI---SKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLH 142
           H CP C KC    S+ TG  R+ S      C  C  R  R  ++  H
Sbjct: 323 HRCPQCGKCFARKSQLTGHQRIHSGEEPHKCPECGKRFLRSSDLYRH 369



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>AT132_MOUSE (Q9CTG6) Probable cation-transporting ATPase 13A2 (EC 3.6.3.-)|
          Length = 1169

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -1

Query: 384 SRCAGFPTLPRLPFCG---SGAVALTRRKETPSSLPRIL 277
           ++  G+PT+P   FC    SG+     RK  P  LP++L
Sbjct: 796 AKATGYPTVPEPQFCHLALSGSTFAVLRKHFPKLLPKVL 834



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>DNAA_BIFLO (Q8G6K0) Chromosomal replication initiator protein dnaA|
          Length = 500

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
 Frame = +2

Query: 173 KEAWKEGKI----WGTAVLVKSDVLDL-----GDFHASLLDGVHKILGKDDGVSFRLVSA 325
           ++ W EG +    +G+ +++  D  D      GD + SLL  +  + G++   +F++V  
Sbjct: 33  EKGWLEGVVPEGVFGSTIVLCVDNNDTLQAIQGDLNDSLLQALRTVTGENMFPAFKVVPK 92

Query: 326 TAPDPQNGSRGKVGKPAHLEEMV 394
           T P+P + ++     P+ +   V
Sbjct: 93  TEPEPLSEAKPAQPYPSEISPTV 115



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>ZFP13_MOUSE (P10754) Zinc finger protein 13 (Zfp-13) (Krox-8 protein)|
          Length = 512

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +2

Query: 11  HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 142
           H CP C+KC ++ +   TH R  +     PC  C     +R  ++ H
Sbjct: 378 HKCPICSKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 424



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>GATA_THEMA (Q9X0Z9) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 475

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 167 KNKEAWKEGKIWGTAVLVKSDVLDLG 244
           +N    K+GK WG  V +K ++L LG
Sbjct: 48  ENVSVEKKGKFWGIPVAIKDNILTLG 73



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>ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2)|
          Length = 482

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 17  CPPCAKCISKGTGTHRLCSSCSALPCLRCR 106
           CP C  CI K  G       C+ + C RCR
Sbjct: 287 CPQCHSCIEKAGG-------CNHIQCTRCR 309



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>UVRA_BRUSU (Q8G0I9) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 974

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 64  PVGACPLADALGTRRAV 14
           P GACP  D LGT++A+
Sbjct: 294 PFGACPTCDGLGTQQAI 310



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>UVRA_BRUME (Q8YHC4) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 974

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 64  PVGACPLADALGTRRAV 14
           P GACP  D LGT++A+
Sbjct: 294 PFGACPTCDGLGTQQAI 310



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>UVRA_BRUAB (P0C0Z2) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 974

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 64  PVGACPLADALGTRRAV 14
           P GACP  D LGT++A+
Sbjct: 294 PFGACPTCDGLGTQQAI 310



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>UVRA_BRUA2 (Q2YPX5) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 974

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 64  PVGACPLADALGTRRAV 14
           P GACP  D LGT++A+
Sbjct: 294 PFGACPTCDGLGTQQAI 310



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>MT2_CALSI (P55950) Metallothionein-2B (MT-2B) (Metallothionein-IIB) (MT-IIB)|
           [Contains: Metallothionein-2A (MT-2A)
           (Metallothionein-IIA) (MT-IIA)]
          Length = 58

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 17  CPPCAKCISKGTGTHR-LCSSCSALPCLRC 103
           CPPC KC S+   T +  CS   + PC  C
Sbjct: 28  CPPCDKCSSECKCTSKEECSKTCSKPCSCC 57



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>ARI2_HUMAN (O95376) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)|
          Length = 493

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = +2

Query: 17  CPPCAKCISKGTG-THRLCSSCSALPCLRC 103
           CP C  CI K  G  H  CS C    C  C
Sbjct: 297 CPKCNICIEKNGGCNHMQCSKCKHDFCWMC 326



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>SN1L2_MOUSE (Q8CFH6) Serine/threonine-protein kinase SNF1-like kinase 2 (EC|
           2.7.11.1) (Salt-inducible kinase 2)
          Length = 931

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +1

Query: 7   PPPLPSLCQVHQQGDRHPP 63
           PPPLPS  Q HQQ    PP
Sbjct: 811 PPPLPSQLQQHQQPPPPPP 829



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>PML_MOUSE (Q60953) Probable transcription factor PML|
          Length = 808

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
 Frame = +2

Query: 17  CPPC---AKCISKGTGTHRLCSSCSALPCLRC 103
           CP C   AKC       H LCS C   P L+C
Sbjct: 31  CPSCQAQAKCPKLLPCLHTLCSGCLEAPGLQC 62



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>UVRA_RHILO (Q98M36) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 973

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 64  PVGACPLADALGTRRAV 14
           P GACP  D LG++RA+
Sbjct: 293 PFGACPTCDGLGSQRAI 309



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>SUHW_DROVI (Q08876) Protein suppressor of hairy wing|
          Length = 899

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
 Frame = +2

Query: 8   HHHCPPCAKCISKGTGTHRLCS-----SCSALPCLRCRTREQRRGEMLLHGLVDRLTGK 169
           H +CP C K     T   R        SC+  PC  C  + +    + LH    +L GK
Sbjct: 287 HINCPDCPKSFKTQTSYERHIFITHSWSCNDYPCSICNAKLRSGALLKLHEQQHQLRGK 345



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>ARI2_MOUSE (Q9Z1K6) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)|
           (UbcM4-interacting protein 48)
          Length = 492

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = +2

Query: 17  CPPCAKCISKGTG-THRLCSSCSALPCLRC 103
           CP C  CI K  G  H  CS C    C  C
Sbjct: 296 CPKCNICIEKNGGCNHMQCSKCKHDFCWMC 325



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>MT_ASTFL (P55951) Metallothionein (MT)|
          Length = 58

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 17  CPPCAKCISKGTGTHRLCSSCSALPCLRC 103
           C    +C + G  T  +C+SC   PC +C
Sbjct: 6   CNDVCECAAGGCKTGCVCTSCRCSPCDKC 34



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>ZNF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96)|
          Length = 501

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
 Frame = +2

Query: 8   HHHCPPCAKCISKGTGT-HRLCSSCSALP--CLRCRTREQRRGEMLLH 142
           H+HC  C K   +  G  H L S     P  CL+C     RR  +  H
Sbjct: 352 HYHCNECGKAFCQKAGLFHHLKSHRRNRPYQCLQCNKSFNRRSTLSQH 399



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>IBRD1_HUMAN (Q8TC41) IBR domain-containing protein 1|
          Length = 275

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +2

Query: 17  CPPCAKCISKGTGT-HRLCSSCSALPCLRCRTR 112
           CP C   I +  G  H  CS C+   C RC  R
Sbjct: 131 CPKCKIHIQRTEGCDHMTCSQCNTNFCYRCGER 163



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>ZCHC4_XENTR (Q66IH9) Zinc finger CCHC domain-containing protein 4|
          Length = 487

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 14  HCPPCAKCISKGTGTHRLCSSCS--ALPCLRCRT 109
           HC  C KC+ K + TH  CS+C+  ALP   C T
Sbjct: 396 HCTQCNKCV-KPSWTH--CSACNHCALPDHPCGT 426



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>LIPA2_PROMP (Q7V0Z8) Lipoyl synthase 2 (EC 2.8.1.-) (Lipoic acid synthase 2)|
           (Lipoate synthase 2) (Lipoyl-acyl-carrier protein
           synthase 2) (Sulfur insertion protein lipA2) (Lip-syn 2)
          Length = 299

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 17  CPPCAKCISKGTGTHRLCSSCSALPCLRCRTREQRRGEM 133
           CP  A+C + GT T  L  S  +  C  C+  + +  E+
Sbjct: 50  CPNRAECYASGTATFLLGGSICSRACAFCQVNKGKPSEI 88



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>SP5_MOUSE (Q9JHX2) Transcription factor Sp5|
          Length = 398

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 396 TTISSRCAGFPTLPRLPFCGSGAVA 322
           T++SS CAG P  PR P   + A A
Sbjct: 207 TSLSSACAGPPHAPRFPASAAAAAA 231


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,247,064
Number of Sequences: 219361
Number of extensions: 783679
Number of successful extensions: 3656
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3642
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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