Clone Name | bastl07c03 |
---|---|
Clone Library Name | barley_pub |
>Y8I5_ENCCU (Q8SU92) Hypothetical protein ECU10_1850| Length = 268 Score = 33.1 bits (74), Expect = 0.42 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%) Frame = +3 Query: 111 RFLRLLQPIRMD----------QWSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSV 257 RF+ LL P W SHN P+G +++T+ TL + L L F I++ + ++ Sbjct: 56 RFITLLLPFSYSAVQYAVLLHTNWKSHNKPEGILHTTLYYTL-NLLFLAFSIISILSITT 114 Query: 258 DPIQRWR 278 PI +W+ Sbjct: 115 LPINKWK 121
>Y304_ENCCU (Q8SW83) Hypothetical protein ECU03_0040| Length = 268 Score = 33.1 bits (74), Expect = 0.42 Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = +3 Query: 150 WSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSVDPIQRWR 278 W SHN P+G +++T+ TL + L+L F I++ + ++ PI +W+ Sbjct: 79 WKSHNKPEGILHTTLYYTL-NLLLLAFSIISILSITTLPINKWK 121
>7LESS_DROVI (P20806) Protein sevenless (EC 2.7.10.1)| Length = 2594 Score = 32.0 bits (71), Expect = 0.93 Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 11/109 (10%) Frame = -1 Query: 335 CSLQYFVLSKLHPYCTPHSSPPLNWINRQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMR 156 CSLQ LS P P+ +N QL+LS + + E+ SLHS LTL + + Sbjct: 1727 CSLQLPALS-----AAPDCPLPVPGLNYQLNLSSSSRSAQLELR--SLHSAAGLTLNISQ 1779 Query: 155 TPLVHADRLEEAQES---GRIGGHKL--------PRIANPSAPDFISGR 42 A L S ++G L A PSAP SGR Sbjct: 1780 LQPYQAYELRAQVGSYYQQQLGQEPLQLPVLTLHTAAATPSAPRNFSGR 1828
>GP53_BPSP1 (O48407) Putative gene 53 protein| Length = 221 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 251 QLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQE 114 +L + N+E Q + + SL S + TL +P AD LEE +E Sbjct: 94 RLQILVNKEVQGSQSTQQSLSSVFESTLEKYNSPDDFADYLEETEE 139
>HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex subunit 3 (EC| 3.6.1.-) (ASC-1 complex subunit p200) (Trip4 complex subunit p200) (Helicase, ATP binding 1) Length = 2202 Score = 29.6 bits (65), Expect = 4.6 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = +3 Query: 366 ASMRSRPRISAHHLRAYPRWRPLLK 440 +S+ + P I HHL + +W+P++K Sbjct: 1959 SSLLTLPNIENHHLHLFKKWKPIMK 1983
>TRME_PORGI (Q7MVZ2) tRNA modification GTPase trmE| Length = 474 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = -1 Query: 167 RVMRTPLVHADRLEEAQESGRIGGHKL--PRIANPSAPDFISGREGR 33 R RT ++ ++ E E+ RIG + +++ P+ P FIS REGR Sbjct: 335 REERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGR 381
>E2AK4_HUMAN (Q9P2K8) Eukaryotic translation initiation factor 2-alpha kinase 4| (EC 2.7.11.1) (GCN2-like protein) Length = 1649 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 7/84 (8%) Frame = -1 Query: 254 RQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQESGRI-------GG 96 R L+ + EE + +E+ ++ R + +RLE A S + GG Sbjct: 160 RLLEAKRKEEQEQREILHEIQRRKEEIKEEKKRKEMAKQERLEIASLSNQDHTSKKDPGG 219 Query: 95 HKLPRIANPSAPDFISGREGRRSS 24 H+ I + +PDF+ + R +S Sbjct: 220 HRTAAILHGGSPDFVGNGKHRANS 243
>PHLPP_CAEEL (Q09564) Protein phosphatase PHLPP-like protein (EC 3.1.3.16)| Length = 1036 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/82 (24%), Positives = 37/82 (45%) Frame = +2 Query: 224 LLHSCSSPAVC*SNSKVEMSVEYNMDEALKARNTAESKFHARDLRGARKYAVKAQNLCPS 403 L+H+ + NS + + + N DEAL+ RN K + + R +K ++C Sbjct: 62 LIHTWQNARAVFYNSNIRLQTKNNQDEALQIRN---MKVDVHESKRGRALRLKDDDVCYL 118 Query: 404 LEGISQMASTLEVHLAAESKID 469 + I Q + LE L +++ Sbjct: 119 I--IFQRPNILEAWLTRAQQVE 138
>SYFA_BARQU (Q6G0Y4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 361 Score = 28.9 bits (63), Expect = 7.8 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Frame = -1 Query: 275 PPLNWI-NRQLDL--SKNEEAQDQEMNKSSLHSTVDLTLRVMRTPL 147 P LN + NR L+L K + + Q MNK TVD+TL V +PL Sbjct: 58 PVLNGLKNRVLELWVQKRDLLRRQAMNKRLSRETVDVTLPVRSSPL 103 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,110,135 Number of Sequences: 219361 Number of extensions: 1389892 Number of successful extensions: 4153 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4053 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4153 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)