ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y8I5_ENCCU (Q8SU92) Hypothetical protein ECU10_1850 33 0.42
2Y304_ENCCU (Q8SW83) Hypothetical protein ECU03_0040 33 0.42
37LESS_DROVI (P20806) Protein sevenless (EC 2.7.10.1) 32 0.93
4GP53_BPSP1 (O48407) Putative gene 53 protein 30 3.5
5HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex su... 30 4.6
6TRME_PORGI (Q7MVZ2) tRNA modification GTPase trmE 29 6.0
7E2AK4_HUMAN (Q9P2K8) Eukaryotic translation initiation factor 2-... 29 6.0
8PHLPP_CAEEL (Q09564) Protein phosphatase PHLPP-like protein (EC ... 29 6.0
9SYFA_BARQU (Q6G0Y4) Phenylalanyl-tRNA synthetase alpha chain (EC... 29 7.8

>Y8I5_ENCCU (Q8SU92) Hypothetical protein ECU10_1850|
          Length = 268

 Score = 33.1 bits (74), Expect = 0.42
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
 Frame = +3

Query: 111 RFLRLLQPIRMD----------QWSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSV 257
           RF+ LL P               W SHN P+G +++T+  TL + L L F I++ + ++ 
Sbjct: 56  RFITLLLPFSYSAVQYAVLLHTNWKSHNKPEGILHTTLYYTL-NLLFLAFSIISILSITT 114

Query: 258 DPIQRWR 278
            PI +W+
Sbjct: 115 LPINKWK 121



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>Y304_ENCCU (Q8SW83) Hypothetical protein ECU03_0040|
          Length = 268

 Score = 33.1 bits (74), Expect = 0.42
 Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +3

Query: 150 WSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSVDPIQRWR 278
           W SHN P+G +++T+  TL + L+L F I++ + ++  PI +W+
Sbjct: 79  WKSHNKPEGILHTTLYYTL-NLLLLAFSIISILSITTLPINKWK 121



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>7LESS_DROVI (P20806) Protein sevenless (EC 2.7.10.1)|
          Length = 2594

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
 Frame = -1

Query: 335  CSLQYFVLSKLHPYCTPHSSPPLNWINRQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMR 156
            CSLQ   LS       P    P+  +N QL+LS +  +   E+   SLHS   LTL + +
Sbjct: 1727 CSLQLPALS-----AAPDCPLPVPGLNYQLNLSSSSRSAQLELR--SLHSAAGLTLNISQ 1779

Query: 155  TPLVHADRLEEAQES---GRIGGHKL--------PRIANPSAPDFISGR 42
                 A  L     S    ++G   L           A PSAP   SGR
Sbjct: 1780 LQPYQAYELRAQVGSYYQQQLGQEPLQLPVLTLHTAAATPSAPRNFSGR 1828



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>GP53_BPSP1 (O48407) Putative gene 53 protein|
          Length = 221

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 251 QLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQE 114
           +L +  N+E Q  +  + SL S  + TL    +P   AD LEE +E
Sbjct: 94  RLQILVNKEVQGSQSTQQSLSSVFESTLEKYNSPDDFADYLEETEE 139



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>HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex subunit 3 (EC|
            3.6.1.-) (ASC-1 complex subunit p200) (Trip4 complex
            subunit p200) (Helicase, ATP binding 1)
          Length = 2202

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 366  ASMRSRPRISAHHLRAYPRWRPLLK 440
            +S+ + P I  HHL  + +W+P++K
Sbjct: 1959 SSLLTLPNIENHHLHLFKKWKPIMK 1983



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>TRME_PORGI (Q7MVZ2) tRNA modification GTPase trmE|
          Length = 474

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -1

Query: 167 RVMRTPLVHADRLEEAQESGRIGGHKL--PRIANPSAPDFISGREGR 33
           R  RT ++  ++ E   E+ RIG  +    +++ P+ P FIS REGR
Sbjct: 335 REERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGR 381



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>E2AK4_HUMAN (Q9P2K8) Eukaryotic translation initiation factor 2-alpha kinase 4|
           (EC 2.7.11.1) (GCN2-like protein)
          Length = 1649

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
 Frame = -1

Query: 254 RQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQESGRI-------GG 96
           R L+  + EE + +E+         ++     R  +   +RLE A  S +        GG
Sbjct: 160 RLLEAKRKEEQEQREILHEIQRRKEEIKEEKKRKEMAKQERLEIASLSNQDHTSKKDPGG 219

Query: 95  HKLPRIANPSAPDFISGREGRRSS 24
           H+   I +  +PDF+   + R +S
Sbjct: 220 HRTAAILHGGSPDFVGNGKHRANS 243



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>PHLPP_CAEEL (Q09564) Protein phosphatase PHLPP-like protein (EC 3.1.3.16)|
          Length = 1036

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 20/82 (24%), Positives = 37/82 (45%)
 Frame = +2

Query: 224 LLHSCSSPAVC*SNSKVEMSVEYNMDEALKARNTAESKFHARDLRGARKYAVKAQNLCPS 403
           L+H+  +      NS + +  + N DEAL+ RN    K    + +  R   +K  ++C  
Sbjct: 62  LIHTWQNARAVFYNSNIRLQTKNNQDEALQIRN---MKVDVHESKRGRALRLKDDDVCYL 118

Query: 404 LEGISQMASTLEVHLAAESKID 469
           +  I Q  + LE  L    +++
Sbjct: 119 I--IFQRPNILEAWLTRAQQVE 138



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>SYFA_BARQU (Q6G0Y4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 361

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -1

Query: 275 PPLNWI-NRQLDL--SKNEEAQDQEMNKSSLHSTVDLTLRVMRTPL 147
           P LN + NR L+L   K +  + Q MNK     TVD+TL V  +PL
Sbjct: 58  PVLNGLKNRVLELWVQKRDLLRRQAMNKRLSRETVDVTLPVRSSPL 103


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,110,135
Number of Sequences: 219361
Number of extensions: 1389892
Number of successful extensions: 4153
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4153
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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