ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
4ref|XM_480601.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
5ref|XM_480600.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
7dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
8dbj|AK119306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
9ref|XM_482374.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
10ref|XM_482373.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
11ref|XM_482051.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
12ref|XM_482041.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
13dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
14dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
15dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
16dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
17dbj|AK071467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
18ref|XM_482045.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.026
19ref|XM_480291.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.10
20gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
21gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
22dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
23dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
24dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
25dbj|AK073176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
26dbj|AK065775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
27gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
28emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.10
29ref|XM_482172.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
30ref|XM_482171.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
31ref|XM_480286.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
32gb|AC111128.24| Mus musculus chromosome 18, clone RP23-338I7, co... 44 0.40
33gb|AC121576.2| Mus musculus BAC clone RP23-244D21 from 18, compl... 44 0.40
34dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
35dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
36dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
37dbj|AK103311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
38dbj|AK066779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
39gb|AC133461.12| Mus musculus chromosome 15, clone RP23-52B2, com... 42 1.6
40emb|BX883049.1| Rattus norvegicus chromosome 20, major histocomp... 42 1.6
41gb|AC107772.19| Mus musculus chromosome 15, clone RP23-102L5, co... 40 6.3
42gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
43gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
44gb|AC009738.3| Drosophila melanogaster clone BACR02J10, complete... 40 6.3
45gb|AC147676.10| Canis Familiaris, clone XX-25H12, complete sequence 40 6.3
46gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.3
47gb|AC121938.3| Mus musculus BAC clone RP24-208D21 from chromosom... 40 6.3
48ref|XM_783308.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.3
49gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.3
50gb|AY113487.1| Drosophila melanogaster RE46170 full insert cDNA 40 6.3
51ref|NM_137598.2| Drosophila melanogaster Odorant-binding protein... 40 6.3
52gb|AY071723.1| Drosophila melanogaster RH38644 full length cDNA 40 6.3
53dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
54dbj|AK072326.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
55dbj|AK067546.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
56gb|AE003795.3| Drosophila melanogaster chromosome 2R, section 55... 40 6.3
57emb|AL772419.4|CNS08C9X Oryza sativa chromosome 12, . BAC OJ1115... 40 6.3
58gb|AC004307.1|AC004307 Drosophila melanogaster DNA sequence (P1 ... 40 6.3 
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0085H07, complete sequence
          Length = 133291

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 366   tggatgaatgaggtgcgggagctctcctatgacatggaggactccatcga 415
             |||||||| |||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 98080 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 98031



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 366   tggatgaatgaggtgcgggagctctcctatgacatggaggactccatcga 415
             |||||||| |||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 97294 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 97343
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 366      tggatgaatgaggtgcgggagctctcctatgacatggaggactccatcga 415
                |||||||| |||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 26848612 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 26848563



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 366      tggatgaatgaggtgcgggagctctcctatgacatggaggactccatcga 415
                |||||||| |||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 26847826 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 26847875



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 374      tgaggtgcgggagctctcctatgacatggaggac 407
                |||||| |||||||| ||||||||||||||||||
Sbjct: 28030089 tgaggtccgggagctgtcctatgacatggaggac 28030056



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 366     tggatgaatgaggtgcgggagctctcctatgacatggaggact 408
               |||||||| || | ||| ||||| |||||||||||||||||||
Sbjct: 6362695 tggatgaaggatgcgcgcgagctgtcctatgacatggaggact 6362737



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 384      gagctctcctatgacatggaggactccatcga 415
                ||||||||||| ||||| |||||| |||||||
Sbjct: 19631371 gagctctcctacgacatcgaggacaccatcga 19631402
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 366      tggatgaatgaggtgcgggagctctcctatgacatggaggactccatcga 415
                |||||||| |||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 27175665 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 27175616



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 366      tggatgaatgaggtgcgggagctctcctatgacatggaggactccatcga 415
                |||||||| |||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 27174879 tggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcga 27174928



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 374      tgaggtgcgggagctctcctatgacatggaggac 407
                |||||| |||||||| ||||||||||||||||||
Sbjct: 28008903 tgaggtccgggagctgtcctatgacatggaggac 28008936



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 366     tggatgaatgaggtgcgggagctctcctatgacatggaggact 408
               |||||||| || | ||| ||||| |||||||||||||||||||
Sbjct: 6429162 tggatgaaggatgcgcgcgagctgtcctatgacatggaggact 6429204



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 384      gagctctcctatgacatggaggactccatcga 415
                ||||||||||| ||||| |||||| |||||||
Sbjct: 19917230 gagctctcctacgacatcgaggacaccatcga 19917261
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>ref|XM_480601.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2808

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 391 cctatgacatggaggactccatcgatgacttcatgca 427
           |||||||||| ||||||| ||||||||||||||||||
Sbjct: 242 cctatgacatcgaggactgcatcgatgacttcatgca 278
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>ref|XM_480600.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3143

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 391 cctatgacatggaggactccatcgatgacttcatgca 427
           |||||||||| ||||||| ||||||||||||||||||
Sbjct: 470 cctatgacatcgaggactgcatcgatgacttcatgca 506
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                    
Query: 391     cctatgacatggaggactccatcgatgacttcatgca 427
               |||||||||| ||||||| ||||||||||||||||||
Sbjct: 6131955 cctatgacatcgaggactgcatcgatgacttcatgca 6131991



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                    
Query: 391     cctatgacatggaggactccatcgatgacttcatgca 427
               |||||||||| ||||||| ||||||||||||||||||
Sbjct: 6121690 cctatgacatcgaggactgcatcgatgacttcatgca 6121726



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 379      tgcgggagctctcctatgacatggaggactccatcga 415
                |||||||||| ||||||||||| ||||||| ||||||
Sbjct: 19690403 tgcgggagctatcctatgacattgaggactgcatcga 19690367



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 315      tttcttctcaagatgtcagaggatgaggatcctgatg 351
                |||||||| |||||||||||||| ||| |||||||||
Sbjct: 17444876 tttcttctgaagatgtcagaggaagagaatcctgatg 17444912



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 375      gaggtgcgggagctctcctatgacatggaggac 407
                |||||||||||||||||||| ||||| ||||||
Sbjct: 17373084 gaggtgcgggagctctcctacgacatcgaggac 17373052



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 312      gcgtttcttctcaagatgtcagaggatgaggatcctgatg 351
                ||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 17420303 gcgttccttctcaatatgtcagaggaggagaatcctgatg 17420342



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 381     cgggagctctcctatgacatggaggac 407
               |||||||| ||||||||||||||||||
Sbjct: 4145364 cgggagctgtcctatgacatggaggac 4145338



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 381      cgggagctctcctatgacatggagga 406
                |||||||| |||||||||||||||||
Sbjct: 18338997 cgggagctgtcctatgacatggagga 18339022



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 382     gggagctctcctatgacatggaggac 407
               ||||||| ||||||||||||||||||
Sbjct: 4099929 gggagctgtcctatgacatggaggac 4099954



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 402    gaggactccatcgatgacttcatgca 427
              ||||||| ||||||||||||||||||
Sbjct: 325930 gaggactgcatcgatgacttcatgca 325955
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>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0486F07
          Length = 154926

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 391   cctatgacatggaggactccatcgatgacttcatgca 427
             |||||||||| ||||||| ||||||||||||||||||
Sbjct: 87972 cctatgacatcgaggactgcatcgatgacttcatgca 88008



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 391   cctatgacatggaggactccatcgatgacttcatgca 427
             |||||||||| ||||||| ||||||||||||||||||
Sbjct: 77707 cctatgacatcgaggactgcatcgatgacttcatgca 77743
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>dbj|AK119306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-F09, full
           insert sequence
          Length = 3143

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 391 cctatgacatggaggactccatcgatgacttcatgca 427
           |||||||||| ||||||| ||||||||||||||||||
Sbjct: 470 cctatgacatcgaggactgcatcgatgacttcatgca 506
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>ref|XM_482374.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 500

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 379 tgcgggagctctcctatgacatggaggactccatcga 415
           |||||||||| ||||||||||| ||||||| ||||||
Sbjct: 168 tgcgggagctatcctatgacattgaggactgcatcga 132
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>ref|XM_482373.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3843

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 379 tgcgggagctctcctatgacatggaggactccatcga 415
           |||||||||| ||||||||||| ||||||| ||||||
Sbjct: 932 tgcgggagctatcctatgacattgaggactgcatcga 968
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>ref|XM_482051.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2787

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 315 tttcttctcaagatgtcagaggatgaggatcctgatg 351
           |||||||| |||||||||||||| ||| |||||||||
Sbjct: 151 tttcttctgaagatgtcagaggaagagaatcctgatg 187
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>ref|XM_482041.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1422

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 375 gaggtgcgggagctctcctatgacatggaggac 407
           |||||||||||||||||||| ||||| ||||||
Sbjct: 883 gaggtgcgggagctctcctacgacatcgaggac 915
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 379   tgcgggagctctcctatgacatggaggactccatcga 415
             |||||||||| ||||||||||| ||||||| ||||||
Sbjct: 19354 tgcgggagctatcctatgacattgaggactgcatcga 19318
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>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1267_E11
          Length = 117073

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 375   gaggtgcgggagctctcctatgacatggaggac 407
             |||||||||||||||||||| ||||| ||||||
Sbjct: 56708 gaggtgcgggagctctcctacgacatcgaggac 56676



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 312    gcgtttcttctcaagatgtcagaggatgaggatcctgatg 351
              ||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 103927 gcgttccttctcaatatgtcagaggaggagaatcctgatg 103966
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>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0690C12
          Length = 139693

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 315   tttcttctcaagatgtcagaggatgaggatcctgatg 351
             |||||||| |||||||||||||| ||| |||||||||
Sbjct: 55721 tttcttctgaagatgtcagaggaagagaatcctgatg 55757



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 312   gcgtttcttctcaagatgtcagaggatgaggatcctgatg 351
             ||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 31148 gcgttccttctcaatatgtcagaggaggagaatcctgatg 31187
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>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0042B03
          Length = 167669

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 379    tgcgggagctctcctatgacatggaggactccatcga 415
              |||||||||| ||||||||||| ||||||| ||||||
Sbjct: 165963 tgcgggagctatcctatgacattgaggactgcatcga 165927
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>dbj|AK071467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098J02, full
           insert sequence
          Length = 655

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 379 tgcgggagctctcctatgacatggaggactccatcga 415
           |||||||||| ||||||||||| ||||||| ||||||
Sbjct: 323 tgcgggagctatcctatgacattgaggactgcatcga 287
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>ref|XM_482045.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2730

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 312 gcgtttcttctcaagatgtcagaggatgaggatcctgatg 351
           ||||| |||||||| ||||||||||| ||| |||||||||
Sbjct: 148 gcgttccttctcaatatgtcagaggaggagaatcctgatg 187
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>ref|XM_480291.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3126

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 381 cgggagctctcctatgacatggaggac 407
           |||||||| ||||||||||||||||||
Sbjct: 208 cgggagctgtcctatgacatggaggac 234
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>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0052C16, complete sequence
          Length = 137872

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 366   tggatgaatgaggtgcgggagctctcctatgacatggaggact 408
             |||||||| || | ||| ||||| |||||||||||||||||||
Sbjct: 34089 tggatgaaggatgcgcgcgagctgtcctatgacatggaggact 34131
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>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03,
              complete sequence
          Length = 157178

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 366    tggatgaatgaggtgcgggagctctcctatgacatggaggact 408
              |||||||| || | ||| ||||| |||||||||||||||||||
Sbjct: 145973 tggatgaaggatgcgcgcgagctgtcctatgacatggaggact 146015
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 393      tatgacatggaggactccatcgatgacttcatgca 427
                |||||||| |||||||  |||||||||||||||||
Sbjct: 23218563 tatgacattgaggactgtatcgatgacttcatgca 23218597



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 396      gacatggaggactccatcga 415
                ||||||||||||||||||||
Sbjct: 10623332 gacatggaggactccatcga 10623351
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>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1590_E05
          Length = 148205

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 381   cgggagctctcctatgacatggaggac 407
             |||||||| ||||||||||||||||||
Sbjct: 44987 cgggagctgtcctatgacatggaggac 44961
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>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0458D06
          Length = 166038

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 381    cgggagctctcctatgacatggaggac 407
              |||||||| ||||||||||||||||||
Sbjct: 138477 cgggagctgtcctatgacatggaggac 138451



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 382   gggagctctcctatgacatggaggac 407
             ||||||| ||||||||||||||||||
Sbjct: 93042 gggagctgtcctatgacatggaggac 93067
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>dbj|AK073176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004J13, full
           insert sequence
          Length = 2576

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 393 tatgacatggaggactccatcgatgacttcatgca 427
           |||||||| |||||||  |||||||||||||||||
Sbjct: 534 tatgacattgaggactgtatcgatgacttcatgca 568
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>dbj|AK065775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038N04, full
           insert sequence
          Length = 3353

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 393 tatgacatggaggactccatcgatgacttcatgca 427
           |||||||| |||||||  |||||||||||||||||
Sbjct: 618 tatgacattgaggactgtatcgatgacttcatgca 652
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 393      tatgacatggaggactccatcgatgacttcatgca 427
                |||||||| |||||||  |||||||||||||||||
Sbjct: 23146754 tatgacattgaggactgtatcgatgacttcatgca 23146788



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 396      gacatggaggactccatcga 415
                ||||||||||||||||||||
Sbjct: 10623214 gacatggaggactccatcga 10623233
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 393   tatgacatggaggactccatcgatgacttcatgca 427
             |||||||| |||||||  |||||||||||||||||
Sbjct: 31681 tatgacattgaggactgtatcgatgacttcatgca 31715
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>ref|XM_482172.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3378

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 381 cgggagctctcctatgacatggagga 406
           |||||||| |||||||||||||||||
Sbjct: 335 cgggagctgtcctatgacatggagga 360
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>ref|XM_482171.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3534

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 381 cgggagctctcctatgacatggagga 406
           |||||||| |||||||||||||||||
Sbjct: 375 cgggagctgtcctatgacatggagga 400
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>ref|XM_480286.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2946

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 382 gggagctctcctatgacatggaggac 407
           ||||||| ||||||||||||||||||
Sbjct: 209 gggagctgtcctatgacatggaggac 234
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>gb|AC111128.24| Mus musculus chromosome 18, clone RP23-338I7, complete sequence
          Length = 209784

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 382  gggagctctcctatgacatggaggac 407
            |||||||||||||||| |||||||||
Sbjct: 6075 gggagctctcctatgagatggaggac 6100
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>gb|AC121576.2| Mus musculus BAC clone RP23-244D21 from 18, complete sequence
          Length = 158243

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 382   gggagctctcctatgacatggaggac 407
             |||||||||||||||| |||||||||
Sbjct: 44388 gggagctctcctatgagatggaggac 44363
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>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0450B04
          Length = 153268

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 402   gaggactccatcgatgacttcatgca 427
             ||||||| ||||||||||||||||||
Sbjct: 35444 gaggactgcatcgatgacttcatgca 35469
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>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1300_E01
          Length = 103022

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 402   gaggactccatcgatgacttcatgca 427
             ||||||| ||||||||||||||||||
Sbjct: 92356 gaggactgcatcgatgacttcatgca 92381
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>dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0473F05
          Length = 140575

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 381   cgggagctctcctatgacatggagga 406
             |||||||| |||||||||||||||||
Sbjct: 25166 cgggagctgtcctatgacatggagga 25191
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>dbj|AK103311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G18, full
           insert sequence
          Length = 3534

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 381 cgggagctctcctatgacatggagga 406
           |||||||| |||||||||||||||||
Sbjct: 375 cgggagctgtcctatgacatggagga 400
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>dbj|AK066779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077A22, full
           insert sequence
          Length = 3378

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 381 cgggagctctcctatgacatggagga 406
           |||||||| |||||||||||||||||
Sbjct: 335 cgggagctgtcctatgacatggagga 360
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>gb|AC133461.12| Mus musculus chromosome 15, clone RP23-52B2, complete sequence
          Length = 176450

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 190    cgacaggagccttgaaaccag 210
              |||||||||||||||||||||
Sbjct: 119508 cgacaggagccttgaaaccag 119528
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>emb|BX883049.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 8/11
          Length = 349476

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 174    gctctggtgagtgcagcgacaggag 198
              |||||||||||||||| ||||||||
Sbjct: 284228 gctctggtgagtgcagggacaggag 284204
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>gb|AC107772.19| Mus musculus chromosome 15, clone RP23-102L5, complete sequence
          Length = 194704

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 298    tcactgccatggaagcgtttcttctcaa 325
              |||||| ||| |||||||||||||||||
Sbjct: 168468 tcactgacatagaagcgtttcttctcaa 168495
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>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24,
              complete sequence
          Length = 152738

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 384    gagctctcctatgacatggaggactccatcga 415
              ||||||||||| ||||| |||||| |||||||
Sbjct: 139692 gagctctcctacgacatcgaggacaccatcga 139723
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>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041I05, complete sequence
          Length = 148785

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 384   gagctctcctatgacatggaggactccatcga 415
             ||||||||||| ||||| |||||| |||||||
Sbjct: 36867 gagctctcctacgacatcgaggacaccatcga 36898
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>gb|AC009738.3| Drosophila melanogaster clone BACR02J10, complete sequence
          Length = 158491

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   ctggagaagctcggcgctct 232
             ||||||||||||||||||||
Sbjct: 21742 ctggagaagctcggcgctct 21723
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>gb|AC147676.10| Canis Familiaris, clone XX-25H12, complete sequence
          Length = 203436

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    gtcagaggatgaggatcctg 348
              ||||||||||||||||||||
Sbjct: 184659 gtcagaggatgaggatcctg 184640
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     accaccttcacaaatcacaa 126
               ||||||||||||||||||||
Sbjct: 7599433 accaccttcacaaatcacaa 7599414
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>gb|AC121938.3| Mus musculus BAC clone RP24-208D21 from chromosome 6, complete sequence
          Length = 144353

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    gctctcctatgacatggagg 405
              ||||||||||||||||||||
Sbjct: 132765 gctctcctatgacatggagg 132746
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>ref|XM_783308.1| PREDICTED: Strongylocentrotus purpuratus similar to baculoviral IAP
            repeat-containing 2 (LOC583399), mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 408  tccatcgatgacttcatgca 427
            ||||||||||||||||||||
Sbjct: 1240 tccatcgatgacttcatgca 1259
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>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    accaccttcacaaatcacaa 126
              ||||||||||||||||||||
Sbjct: 115857 accaccttcacaaatcacaa 115876
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>gb|AY113487.1| Drosophila melanogaster RE46170 full insert cDNA
          Length = 559

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ctggagaagctcggcgctct 232
           ||||||||||||||||||||
Sbjct: 313 ctggagaagctcggcgctct 332
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>ref|NM_137598.2| Drosophila melanogaster Odorant-binding protein 56a CG11797-RA
           (Obp56a), mRNA
          Length = 550

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ctggagaagctcggcgctct 232
           ||||||||||||||||||||
Sbjct: 315 ctggagaagctcggcgctct 334
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>gb|AY071723.1| Drosophila melanogaster RH38644 full length cDNA
          Length = 562

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ctggagaagctcggcgctct 232
           ||||||||||||||||||||
Sbjct: 314 ctggagaagctcggcgctct 333
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     accaccttcacaaatcacaa 126
               ||||||||||||||||||||
Sbjct: 7597268 accaccttcacaaatcacaa 7597249
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>dbj|AK072326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026M23, full
           insert sequence
          Length = 3395

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 396 gacatggaggactccatcga 415
           ||||||||||||||||||||
Sbjct: 276 gacatggaggactccatcga 295
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>dbj|AK067546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109H16, full
           insert sequence
          Length = 3271

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 384 gagctctcctatgacatggaggactccatcga 415
           ||||||||||| ||||| |||||| |||||||
Sbjct: 572 gagctctcctacgacatcgaggacaccatcga 603
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>gb|AE003795.3| Drosophila melanogaster chromosome 2R, section 55 of 73 of the complete
              sequence
          Length = 248096

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    ctggagaagctcggcgctct 232
              ||||||||||||||||||||
Sbjct: 242486 ctggagaagctcggcgctct 242505
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>emb|AL772419.4|CNS08C9X Oryza sativa chromosome 12, . BAC OJ1115_G02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 112916

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   gacatggaggactccatcga 415
             ||||||||||||||||||||
Sbjct: 86635 gacatggaggactccatcga 86654
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>gb|AC004307.1|AC004307 Drosophila melanogaster DNA sequence (P1 DS02074 (D199)), complete
            sequence
          Length = 30848

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  ctggagaagctcggcgctct 232
            ||||||||||||||||||||
Sbjct: 4153 ctggagaagctcggcgctct 4134


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,327,702
Number of Sequences: 3902068
Number of extensions: 3327702
Number of successful extensions: 63882
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63402
Number of HSP's gapped (non-prelim): 480
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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