ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl07b12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191088.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1551 Score = 319 bits (161), Expect = 4e-84 Identities = 251/281 (89%) Strand = Plus / Plus Query: 93 tggacgctccccgaccaccccacgctccccaaggggaagacggtggccgtcgtcgtgctc 152 |||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct: 22 tggacgctgcccgaccaccccaagctccccaaggggaagacggtagccctcgtcgtgctt 81 Query: 153 gacggatggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgccc 212 ||||||||||||||||||| | | ||| |||||||||||||||||||||| ||||||||| Sbjct: 82 gacggatggggcgaggccaacgccgacaagtacaactgcatccatgtcgcccagacgccc 141 Query: 213 gtcatggattcgctcaagaatggtgctcctgagaagtggagactagtgaaggctcatgga 272 ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| Sbjct: 142 gtcatggattcgctcaagaatggtgctcccgagaggtggagattagtgaaggctcatgga 201 Query: 273 actgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggccacaatgct 332 || || |||||||| || || || || |||||||||||||| ||||| || ||||||||| Sbjct: 202 acagctgttggtcttcctagcgaagatgacatgggcaacagcgaagtgggtcacaatgct 261 Query: 333 cttggagctggccgaatctttgctcaaggcgcgaagcttgt 373 ||||| ||||| || || |||||||| || || |||||||| Sbjct: 262 cttggtgctggtcgcatttttgctcagggtgctaagcttgt 302
>dbj|AK065059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J10, full insert sequence Length = 2026 Score = 319 bits (161), Expect = 4e-84 Identities = 251/281 (89%) Strand = Plus / Plus Query: 93 tggacgctccccgaccaccccacgctccccaaggggaagacggtggccgtcgtcgtgctc 152 |||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct: 114 tggacgctgcccgaccaccccaagctccccaaggggaagacggtagccctcgtcgtgctt 173 Query: 153 gacggatggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgccc 212 ||||||||||||||||||| | | ||| |||||||||||||||||||||| ||||||||| Sbjct: 174 gacggatggggcgaggccaacgccgacaagtacaactgcatccatgtcgcccagacgccc 233 Query: 213 gtcatggattcgctcaagaatggtgctcctgagaagtggagactagtgaaggctcatgga 272 ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| Sbjct: 234 gtcatggattcgctcaagaatggtgctcccgagaggtggagattagtgaaggctcatgga 293 Query: 273 actgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggccacaatgct 332 || || |||||||| || || || || |||||||||||||| ||||| || ||||||||| Sbjct: 294 acagctgttggtcttcctagcgaagatgacatgggcaacagcgaagtgggtcacaatgct 353 Query: 333 cttggagctggccgaatctttgctcaaggcgcgaagcttgt 373 ||||| ||||| || || |||||||| || || |||||||| Sbjct: 354 cttggtgctggtcgcatttttgctcagggtgctaagcttgt 394
>dbj|AK060836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C10, full insert sequence Length = 1945 Score = 319 bits (161), Expect = 4e-84 Identities = 251/281 (89%) Strand = Plus / Plus Query: 93 tggacgctccccgaccaccccacgctccccaaggggaagacggtggccgtcgtcgtgctc 152 |||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct: 26 tggacgctgcccgaccaccccaagctccccaaggggaagacggtagccctcgtcgtgctt 85 Query: 153 gacggatggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgccc 212 ||||||||||||||||||| | | ||| |||||||||||||||||||||| ||||||||| Sbjct: 86 gacggatggggcgaggccaacgccgacaagtacaactgcatccatgtcgcccagacgccc 145 Query: 213 gtcatggattcgctcaagaatggtgctcctgagaagtggagactagtgaaggctcatgga 272 ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| Sbjct: 146 gtcatggattcgctcaagaatggtgctcccgagaggtggagattagtgaaggctcatgga 205 Query: 273 actgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggccacaatgct 332 || || |||||||| || || || || |||||||||||||| ||||| || ||||||||| Sbjct: 206 acagctgttggtcttcctagcgaagatgacatgggcaacagcgaagtgggtcacaatgct 265 Query: 333 cttggagctggccgaatctttgctcaaggcgcgaagcttgt 373 ||||| ||||| || || |||||||| || || |||||||| Sbjct: 266 cttggtgctggtcgcatttttgctcagggtgctaagcttgt 306
>gb|M80912.1|MZEPPGM Zea mays cofactor-independent phosphoglycerate mutase mRNA, complete cds Length = 1946 Score = 311 bits (157), Expect = 9e-82 Identities = 253/285 (88%) Strand = Plus / Plus Query: 93 tggacgctccccgaccaccccacgctccccaaggggaagacggtggccgtcgtcgtgctc 152 |||||||| || |||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 22 tggacgcttccggaccaccccaagctccccaaggggaaatcggtggctgtcgtcgtgctg 81 Query: 153 gacggatggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgccc 212 ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| || Sbjct: 82 gacggatggggcgaggccaaccccgaccagtacaactgcatccatgtcgctcagactcct 141 Query: 213 gtcatggattcgctcaagaatggtgctcctgagaagtggagactagtgaaggctcatgga 272 |||||||| ||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 142 gtcatggactcgttaaagaatggtgctcctgagaaatggagactagtgaaggctcatgga 201 Query: 273 actgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggccacaatgct 332 || || || ||||||||| ||| || ||||||||||||||||||||||| |||||||| Sbjct: 202 acagctgtgggtctcccatctgatgatgacatgggcaacagtgaagttggtcacaatgca 261 Query: 333 cttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 ||||| ||||| ||||| || || ||||| || |||||||||||| Sbjct: 262 cttggtgctggtcgaattttcgcccaaggtgctaagcttgttgat 306
>gb|AY103600.1| Zea mays PCO072546 mRNA sequence Length = 2174 Score = 303 bits (153), Expect = 2e-79 Identities = 252/285 (88%) Strand = Plus / Plus Query: 93 tggacgctccccgaccaccccacgctccccaaggggaagacggtggccgtcgtcgtgctc 152 |||||||| || |||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 163 tggacgcttccggaccaccccaagctccccaaggggaaaccggtggctgtcgtcgtgctg 222 Query: 153 gacggatggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgccc 212 ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| || Sbjct: 223 gacggatggggcgaggccaaccccgaccagtacaactgcatccatgtcgctcagactcct 282 Query: 213 gtcatggattcgctcaagaatggtgctcctgagaagtggagactagtgaaggctcatgga 272 |||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 283 gtcatggactcgctaaagaatggcgctcctgagaaatggagactagtgaaggctcatgga 342 Query: 273 actgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggccacaatgct 332 || || || ||||||||| ||| || ||||||||||||||||||||||| |||||||| Sbjct: 343 acagctgtgggtctcccatctgatgatgacatgggcaacagtgaagttggtcacaatgca 402 Query: 333 cttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 ||||| ||||| || || || || ||||| || |||||||||||| Sbjct: 403 cttggtgctggtcggattttcgcccaaggtgctaagcttgttgat 447
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 202 bits (102), Expect = 6e-49 Identities = 132/142 (92%) Strand = Plus / Plus Query: 93 tggacgctccccgaccaccccacgctccccaaggggaagacggtggccgtcgtcgtgctc 152 |||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct: 34797996 tggacgctgcccgaccaccccaagctccccaaggggaagacggtagccctcgtcgtgctt 34798055 Query: 153 gacggatggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgccc 212 ||||||||||||||||||| | | ||| |||||||||||||||||||||| ||||||||| Sbjct: 34798056 gacggatggggcgaggccaacgccgacaagtacaactgcatccatgtcgcccagacgccc 34798115 Query: 213 gtcatggattcgctcaagaatg 234 |||||||||||||||||||||| Sbjct: 34798116 gtcatggattcgctcaagaatg 34798137 Score = 113 bits (57), Expect = 4e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 234 ggtgctcctgagaagtggagactagtgaaggctcatggaactgccgttggtctcccaagt 293 |||||||| |||| ||||||| ||||||||||||||||||| || |||||||| || || Sbjct: 34798453 ggtgctcccgagaggtggagattagtgaaggctcatggaacagctgttggtcttcctagc 34798512 Query: 294 gacgacgacatgggcaacagtgaagttggccacaatgctcttggagctggccgaatcttt 353 || || |||||||||||||| ||||| || |||||||||||||| ||||| || || ||| Sbjct: 34798513 gaagatgacatgggcaacagcgaagtgggtcacaatgctcttggtgctggtcgcattttt 34798572 Query: 354 gctca 358 ||||| Sbjct: 34798573 gctca 34798577
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1148D12 Length = 132060 Score = 202 bits (102), Expect = 6e-49 Identities = 132/142 (92%) Strand = Plus / Plus Query: 93 tggacgctccccgaccaccccacgctccccaaggggaagacggtggccgtcgtcgtgctc 152 |||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct: 113236 tggacgctgcccgaccaccccaagctccccaaggggaagacggtagccctcgtcgtgctt 113295 Query: 153 gacggatggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgccc 212 ||||||||||||||||||| | | ||| |||||||||||||||||||||| ||||||||| Sbjct: 113296 gacggatggggcgaggccaacgccgacaagtacaactgcatccatgtcgcccagacgccc 113355 Query: 213 gtcatggattcgctcaagaatg 234 |||||||||||||||||||||| Sbjct: 113356 gtcatggattcgctcaagaatg 113377 Score = 113 bits (57), Expect = 4e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 234 ggtgctcctgagaagtggagactagtgaaggctcatggaactgccgttggtctcccaagt 293 |||||||| |||| ||||||| ||||||||||||||||||| || |||||||| || || Sbjct: 113693 ggtgctcccgagaggtggagattagtgaaggctcatggaacagctgttggtcttcctagc 113752 Query: 294 gacgacgacatgggcaacagtgaagttggccacaatgctcttggagctggccgaatcttt 353 || || |||||||||||||| ||||| || |||||||||||||| ||||| || || ||| Sbjct: 113753 gaagatgacatgggcaacagcgaagtgggtcacaatgctcttggtgctggtcgcattttt 113812 Query: 354 gctca 358 ||||| Sbjct: 113813 gctca 113817
>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454H12 Length = 161004 Score = 202 bits (102), Expect = 6e-49 Identities = 132/142 (92%) Strand = Plus / Plus Query: 93 tggacgctccccgaccaccccacgctccccaaggggaagacggtggccgtcgtcgtgctc 152 |||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct: 57168 tggacgctgcccgaccaccccaagctccccaaggggaagacggtagccctcgtcgtgctt 57227 Query: 153 gacggatggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgccc 212 ||||||||||||||||||| | | ||| |||||||||||||||||||||| ||||||||| Sbjct: 57228 gacggatggggcgaggccaacgccgacaagtacaactgcatccatgtcgcccagacgccc 57287 Query: 213 gtcatggattcgctcaagaatg 234 |||||||||||||||||||||| Sbjct: 57288 gtcatggattcgctcaagaatg 57309 Score = 113 bits (57), Expect = 4e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 234 ggtgctcctgagaagtggagactagtgaaggctcatggaactgccgttggtctcccaagt 293 |||||||| |||| ||||||| ||||||||||||||||||| || |||||||| || || Sbjct: 57625 ggtgctcccgagaggtggagattagtgaaggctcatggaacagctgttggtcttcctagc 57684 Query: 294 gacgacgacatgggcaacagtgaagttggccacaatgctcttggagctggccgaatcttt 353 || || |||||||||||||| ||||| || |||||||||||||| ||||| || || ||| Sbjct: 57685 gaagatgacatgggcaacagcgaagtgggtcacaatgctcttggtgctggtcgcattttt 57744 Query: 354 gctca 358 ||||| Sbjct: 57745 gctca 57749
>emb|Z33611.1|ZMPHMU1 Z.mays (W22) phosphoglycerate mutase gene (exon 1) Length = 1110 Score = 170 bits (86), Expect = 2e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 93 tggacgctccccgaccaccccacgctccccaaggggaagacggtggccgtcgtcgtgctc 152 |||||||| || |||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 902 tggacgcttccggaccaccccaagctccccaaggggaaaccggtggctgtcgtcgtgctg 961 Query: 153 gacggatggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgccc 212 ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| || Sbjct: 962 gacggatggggcgaggccaaccccgaccagtacaactgcatccatgtcgctcagactcct 1021 Query: 213 gtcatggattcgctcaagaatg 234 |||||||| ||||| ||||||| Sbjct: 1022 gtcatggactcgctaaagaatg 1043
>emb|AJ004915.1|MDJ004915 Malus domestica mRNA for phosphoglyceromutase, complete cds Length = 2132 Score = 157 bits (79), Expect = 3e-35 Identities = 199/239 (83%) Strand = Plus / Plus Query: 159 tggggcgaggccagccctgaccagtacaactgcatccatgtcgcacagacgcccgtcatg 218 ||||||||||||| | | |||||||||||||||||||||||||| |||| ||||||||| Sbjct: 162 tggggcgaggccaacgccgaccagtacaactgcatccatgtcgccgagacccccgtcatg 221 Query: 219 gattcgctcaagaatggtgctcctgagaagtggagactagtgaaggctcatggaactgcc 278 |||||||||||||| ||||||||||| | ||||| |||||| ||||| ||||||||| Sbjct: 222 gattcgctcaagaagggtgctcctgaaagatggaggttagtgagagctcacggaactgcc 281 Query: 279 gttggtctcccaagtgacgacgacatgggcaacagtgaagttggccacaatgctcttgga 338 || || || || | || || || |||||||| |||||||| || |||||||| || || Sbjct: 282 gtgggacttcccacagaggatgatatgggcaatagtgaagtgggtcacaatgccctcggc 341 Query: 339 gctggccgaatctttgctcaaggcgcgaagcttgttgatgctgctcttgcttccgggaa 397 || || || || ||||| || || || ||||||||||||||||| |||||||| ||||| Sbjct: 342 gccgggcgtatttttgcccagggtgctaagcttgttgatgctgcacttgcttctgggaa 400
>ref|NM_180211.1| Arabidopsis thaliana 2,3-bisphosphoglycerate-independent phosphoglycerate mutase/ catalytic/ metal ion binding / phosphoglycerate mutase AT3G08590 transcript variant AT3G08590.2 mRNA, complete cds Length = 1979 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 264 gctcatggaactgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggc 323 |||||||| || |||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 286 gctcatggtaccgccgttggtctccccagcgaagacgacatgggaaacagtgaagttggc 345 Query: 324 cacaatgctcttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 |||||||||||||||||||| ||||| | |||||||| || |||||||||||| Sbjct: 346 cacaatgctcttggagctggtcgaatttacgctcaaggtgctaagcttgttgat 399
>ref|NM_111693.2| Arabidopsis thaliana 2,3-bisphosphoglycerate-independent phosphoglycerate mutase/ catalytic/ metal ion binding / phosphoglycerate mutase AT3G08590 transcript variant AT3G08590.1 mRNA, complete cds Length = 1986 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 264 gctcatggaactgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggc 323 |||||||| || |||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 287 gctcatggtaccgccgttggtctccccagcgaagacgacatgggaaacagtgaagttggc 346 Query: 324 cacaatgctcttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 |||||||||||||||||||| ||||| | |||||||| || |||||||||||| Sbjct: 347 cacaatgctcttggagctggtcgaatttacgctcaaggtgctaagcttgttgat 400
>gb|AY113910.1| Arabidopsis thaliana putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (At3g08590) mRNA, complete cds Length = 1714 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 264 gctcatggaactgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggc 323 |||||||| || |||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 196 gctcatggtaccgccgttggtctccccagcgaagacgacatgggaaacagtgaagttggc 255 Query: 324 cacaatgctcttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 |||||||||||||||||||| ||||| | |||||||| || |||||||||||| Sbjct: 256 cacaatgctcttggagctggtcgaatttacgctcaaggtgctaagcttgttgat 309
>gb|AY039969.1| Arabidopsis thaliana putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (At3g08590) mRNA, complete cds Length = 1979 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 264 gctcatggaactgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggc 323 |||||||| || |||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 286 gctcatggtaccgccgttggtctccccagcgaagacgacatgggaaacagtgaagttggc 345 Query: 324 cacaatgctcttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 |||||||||||||||||||| ||||| | |||||||| || |||||||||||| Sbjct: 346 cacaatgctcttggagctggtcgaatttacgctcaaggtgctaagcttgttgat 399
>gb|AF424615.1|AF424615 Arabidopsis thaliana AT3g08590/F17O14_6 mRNA, complete cds Length = 1988 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 264 gctcatggaactgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggc 323 |||||||| || |||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 285 gctcatggtaccgccgttggtctccccagcgaagacgacatgggaaacagtgaagttggc 344 Query: 324 cacaatgctcttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 |||||||||||||||||||| ||||| | |||||||| || |||||||||||| Sbjct: 345 cacaatgctcttggagctggtcgaatttacgctcaaggtgctaagcttgttgat 398
>emb|BX823231.1|CNS0A7GD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZG01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1788 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 264 gctcatggaactgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggc 323 |||||||| || |||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 274 gctcatggtaccgccgttggtctccccagcgaagacgacatgggaaacagtgaagttggc 333 Query: 324 cacaatgctcttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 |||||||||||||||||||| ||||| | |||||||| || |||||||||||| Sbjct: 334 cacaatgctcttggagctggtcgaatttacgctcaaggtgctaagcttgttgat 387
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 264 gctcatggaactgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggc 323 |||||||| || |||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 21870 gctcatggtaccgccgttggtctccccagcgaagacgacatgggaaacagtgaagttggc 21811 Query: 324 cacaatgctcttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 |||||||||||||||||||| ||||| | |||||||| || |||||||||||| Sbjct: 21810 cacaatgctcttggagctggtcgaatttacgctcaaggtgctaagcttgttgat 21757
>gb|AY085044.1| Arabidopsis thaliana clone 125616 mRNA, complete sequence Length = 1962 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 264 gctcatggaactgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggc 323 |||||||| || |||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 285 gctcatggtaccgccgttggtctccccagcgaagacgacatgggaaacagtgaagttggc 344 Query: 324 cacaatgctcttggagctggccgaatctttgctcaaggcgcgaagcttgttgat 377 |||||||||||||||||||| ||||| | |||||||| || |||||||||||| Sbjct: 345 cacaatgctcttggagctggtcgaatttacgctcaaggtgctaagcttgttgat 398
>emb|Z33612.1|ZMPHMU2 Z.mays (W22) phosphoglycerate mutase gene exons 2-8 Length = 3583 Score = 129 bits (65), Expect = 7e-27 Identities = 101/113 (89%) Strand = Plus / Plus Query: 237 gctcctgagaagtggagactagtgaaggctcatggaactgccgttggtctcccaagtgac 296 ||||||||||| |||||||||||||||||||||||||| || || ||||||||| ||| Sbjct: 194 gctcctgagaaatggagactagtgaaggctcatggaacagctgtgggtctcccatctgat 253 Query: 297 gacgacatgggcaacagtgaagttggccacaatgctcttggagctggccgaat 349 || ||||||||||||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 254 gatgacatgggcaacagtgaagttggtcacaatgcacttggtgctggtcgaat 306
>dbj|AK065541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029A18, full insert sequence Length = 1920 Score = 127 bits (64), Expect = 3e-26 Identities = 217/268 (80%) Strand = Plus / Plus Query: 116 gctccccaaggggaagacggtggccgtcgtcgtgctcgacggatggggcgaggccagccc 175 |||||| ||||||||| |||||||||| || || || || |||||||| ||||| | Sbjct: 139 gctccctaaggggaagccggtggccgtggttgtactggatggatggggtgaggctgatgc 198 Query: 176 tgaccagtacaactgcatccatgtcgcacagacgcccgtcatggattcgctcaagaatgg 235 |||||||| |||||||||||||| || |||| || ||||||||||||||||| || Sbjct: 199 ggaccagtataactgcatccatgttgctgagacaccaacaatggattcgctcaagaaggg 258 Query: 236 tgctcctgagaagtggagactagtgaaggctcatggaactgccgttggtctcccaagtga 295 |||||| |||||||||| || || |||||||||||||| || ||||||||||| ||| Sbjct: 259 tgctccagagaagtggaagcttgtaaaggctcatggaacagctgttggtctcccttctga 318 Query: 296 cgacgacatgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgc 355 || |||||||| |||||||| ||||| || || || ||||| ||||| || || ||||| Sbjct: 319 tgatgacatgggtaacagtgaggttgggcataacgcacttggtgctggtcggatttttgc 378 Query: 356 tcaaggcgcgaagcttgttgatgctgct 383 |||||| || || ||||| ||| ||||| Sbjct: 379 tcaaggggctaaacttgtggatactgct 406
>gb|BT018558.1| Zea mays clone EL01N0439H08.d mRNA sequence Length = 1718 Score = 125 bits (63), Expect = 1e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 243 gagaagtggagactagtgaaggctcatggaactgccgttggtctcccaagtgacgacgac 302 ||||| |||||||||||||||||||||||||| || || ||||||||| ||| || ||| Sbjct: 1 gagaaatggagactagtgaaggctcatggaacagctgtgggtctcccatctgatgatgac 60 Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 |||||||||||||||||||| |||||||| ||||| ||||| || || || || ||||| Sbjct: 61 atgggcaacagtgaagttggtcacaatgcacttggtgctggtcggattttcgcccaaggt 120 Query: 363 gcgaagcttgttgat 377 || |||||||||||| Sbjct: 121 gctaagcttgttgat 135
>gb|U16021.1|MCU16021 Mesembryanthemum crystallinum phosphoglyceromutase (pgm) gene, complete cds Length = 2032 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 300 gacatgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaa 359 ||||||||||||||||||||||| |||||||||||||| ||||| || || | ||||||| Sbjct: 333 gacatgggcaacagtgaagttggtcacaatgctcttggcgctgggcgtatatatgctcaa 392 Query: 360 ggcgcgaagcttgttgat 377 || || |||||||||||| Sbjct: 393 ggggcaaagcttgttgat 410
>emb|AJ132256.1|AGR132256 Apium graveolens mRNA for cofactor-independent phosphoglyceromutase Length = 2001 Score = 89.7 bits (45), Expect = 6e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 215 catggattcgctcaagaatggtgctcctgagaagtggagactagtgaaggctcatggaac 274 ||||||||| || ||||||||||| ||||| | |||||| | |||| |||||||||||| Sbjct: 197 catggattctcttaagaatggtgcacctgatagatggagattggtgagggctcatggaac 256 Query: 275 tgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggccacaatgctct 334 ||| ||||| || || | || || |||||||| |||||||||||||| ||||||||||| Sbjct: 257 tgctgttggccttcctacagaagatgacatgggaaacagtgaagttggacacaatgctct 316 Query: 335 tggagctgg 343 || ||||| Sbjct: 317 gggcgctgg 325
>emb|X70651.1|NTPGM N.tabacum mRNA for phosphoglyceromutase Length = 2085 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 |||||||||||||| ||||| |||||||||||||| ||||| | |||||||||||||| Sbjct: 259 atgggcaacagtgaggttggtcacaatgctcttggtgctggaaggatctttgctcaaggt 318 Query: 363 gcgaagcttgttgat 377 || |||||||||||| Sbjct: 319 gcaaagcttgttgat 333
>gb|AF047842.1| Solanum tuberosum phosphoglycerate mutase (pgam) mRNA, complete cds Length = 1940 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||||||||| |||||||||||||| ||||| | |||||||||||||| Sbjct: 311 atgggtaacagtgaagttggtcacaatgctcttggtgctggaaggatctttgctcaaggt 370 Query: 363 gcgaagcttgttga 376 || ||||||||||| Sbjct: 371 gcaaagcttgttga 384
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 6e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 234 ggtgctcctgagaagtggagactagtgaaggctcatggaactgccgttggtctcccaagt 293 |||||||| |||||||||| || || |||||||||||||| || ||||||||||| | Sbjct: 23606601 ggtgctccagagaagtggaagcttgtaaaggctcatggaacagctgttggtctcccttct 23606542 Query: 294 gacgacgacatgggcaacagtgaagttggccacaatgctcttggagctggccgaatcttt 353 || || |||||||| |||||||| ||||| || || || ||||| ||||| || || ||| Sbjct: 23606541 gatgatgacatgggtaacagtgaggttgggcataacgcacttggtgctggtcggattttt 23606482 Query: 354 gctcaagg 361 |||||||| Sbjct: 23606481 gctcaagg 23606474
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 79.8 bits (40), Expect = 6e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 234 ggtgctcctgagaagtggagactagtgaaggctcatggaactgccgttggtctcccaagt 293 |||||||| |||||||||| || || |||||||||||||| || ||||||||||| | Sbjct: 143773 ggtgctccagagaagtggaagcttgtaaaggctcatggaacagctgttggtctcccttct 143714 Query: 294 gacgacgacatgggcaacagtgaagttggccacaatgctcttggagctggccgaatcttt 353 || || |||||||| |||||||| ||||| || || || ||||| ||||| || || ||| Sbjct: 143713 gatgatgacatgggtaacagtgaggttgggcataacgcacttggtgctggtcggattttt 143654 Query: 354 gctcaagg 361 |||||||| Sbjct: 143653 gctcaagg 143646
>emb|X70652.1|RCPGM R.communis mRNA for phosphoglyceromutase Length = 1956 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 264 gctcatggaactgccgttggtctcccaagtgacgacgacatgggcaacagtgaagttggc 323 ||||||||||| || || || || |||| ||| || || |||||||||||||||||||| Sbjct: 184 gctcatggaacagcggtgggacttccaactgaagatgatatgggcaacagtgaagttggt 243 Query: 324 cacaatgctcttggagctggccgaatctttgctcaaggcgcgaagcttgttgatgctgct 383 ||||| || || || ||||| || || | ||||||||| || |||||||||||| |||| Sbjct: 244 cacaacgcgctcggtgctggacgcatttatgctcaaggtgcaaagcttgttgatcttgct 303 Query: 384 cttgc 388 ||||| Sbjct: 304 cttgc 308
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 294 gacgacgacatgggcaacagtgaagttggccacaatgctcttggagctggcc 345 ||||||||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 12119305 gacgacgacatgggcaacagtgaggttggccacaacgcgcttggagcaggcc 12119356
>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0076E06, from chromosome 3, complete sequence Length = 126323 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 294 gacgacgacatgggcaacagtgaagttggccacaatgctcttggagctggcc 345 ||||||||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 11914 gacgacgacatgggcaacagtgaggttggccacaacgcgcttggagcaggcc 11965
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 294 gacgacgacatgggcaacagtgaagttggccacaatgctcttggagctggcc 345 ||||||||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 12116068 gacgacgacatgggcaacagtgaggttggccacaacgcgcttggagcaggcc 12116119
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 294 gacgacgacatgggcaacagtgaagttggccacaatgctcttggagctggcc 345 ||||||||||||||||||||||| ||||||||||| || |||||||| |||| Sbjct: 139885 gacgacgacatgggcaacagtgaggttggccacaacgcgcttggagcaggcc 139936
>ref|NM_100850.2| Arabidopsis thaliana 2,3-bisphosphoglycerate-independent phosphoglycerate mutase/ catalytic/ metal ion binding / phosphoglycerate mutase AT1G09780 mRNA, complete cds Length = 1911 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||| ||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 286 atgggaaacagtgaggttggtcataatgctcttggtgctggtcgtatctttgctcaaggt 345 Query: 363 gcgaagctt 371 || |||||| Sbjct: 346 gctaagctt 354 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 gaccaccccacgctccccaaggggaagac 133 |||||||||| |||||||||||| ||||| Sbjct: 88 gaccaccccaagctccccaagggtaagac 116
>gb|BT000773.1| Arabidopsis thaliana clone RAFL08-12-B13 (R11234) putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (At1g09780) mRNA, complete cds Length = 1915 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||| ||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 286 atgggaaacagtgaggttggtcataatgctcttggtgctggtcgtatctttgctcaaggt 345 Query: 363 gcgaagctt 371 || |||||| Sbjct: 346 gctaagctt 354 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 gaccaccccacgctccccaaggggaagac 133 |||||||||| |||||||||||| ||||| Sbjct: 88 gaccaccccaagctccccaagggtaagac 116
>gb|BT000692.1| Arabidopsis thaliana clone RAFL08-13-D11 (R11023) putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (At1g09780) mRNA, complete cds Length = 1922 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||| ||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 286 atgggaaacagtgaggttggtcataatgctcttggtgctggtcgtatctttgctcaaggt 345 Query: 363 gcgaagctt 371 || |||||| Sbjct: 346 gctaagctt 354 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 gaccaccccacgctccccaaggggaagac 133 |||||||||| |||||||||||| ||||| Sbjct: 88 gaccaccccaagctccccaagggtaagac 116
>gb|AY150432.1| Arabidopsis thaliana putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (At1g09780) mRNA, complete cds Length = 1705 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||| ||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 229 atgggaaacagtgaggttggtcataatgctcttggtgctggtcgtatctttgctcaaggt 288 Query: 363 gcgaagctt 371 || |||||| Sbjct: 289 gctaagctt 297 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 gaccaccccacgctccccaaggggaagac 133 |||||||||| |||||||||||| ||||| Sbjct: 31 gaccaccccaagctccccaagggtaagac 59
>gb|AY057581.1| Arabidopsis thaliana putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (At1g09780) mRNA, complete cds Length = 1898 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||| ||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 286 atgggaaacagtgaggttggtcataatgctcttggtgctggtcgtatctttgctcaaggt 345 Query: 363 gcgaagctt 371 || |||||| Sbjct: 346 gctaagctt 354 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 gaccaccccacgctccccaaggggaagac 133 |||||||||| |||||||||||| ||||| Sbjct: 88 gaccaccccaagctccccaagggtaagac 116
>gb|AY081722.1| Arabidopsis thaliana At1g09780/F21M12_17 mRNA, complete cds Length = 1674 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||| ||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 229 atgggaaacagtgaggttggtcataatgctcttggtgctggtcgtatctttgctcaaggt 288 Query: 363 gcgaagctt 371 || |||||| Sbjct: 289 gctaagctt 297 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 gaccaccccacgctccccaaggggaagac 133 |||||||||| |||||||||||| ||||| Sbjct: 31 gaccaccccaagctccccaagggtaagac 59
>gb|AY045627.1| Arabidopsis thaliana At1g09780/F21M12_17 mRNA, complete cds Length = 1900 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||| ||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 286 atgggaaacagtgaggttggtcataatgctcttggtgctggtcgtatctttgctcaaggt 345 Query: 363 gcgaagctt 371 || |||||| Sbjct: 346 gctaagctt 354 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 gaccaccccacgctccccaaggggaagac 133 |||||||||| |||||||||||| ||||| Sbjct: 88 gaccaccccaagctccccaagggtaagac 116
>gb|AY086182.1| Arabidopsis thaliana clone 22067 mRNA, complete sequence Length = 1888 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||| ||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 286 atgggaaacagtgaggttggtcataatgctcttggtgctggtcgtatctttgctcaaggt 345 Query: 363 gcgaagctt 371 || |||||| Sbjct: 346 gctaagctt 354 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 gaccaccccacgctccccaaggggaagac 133 |||||||||| |||||||||||| ||||| Sbjct: 88 gaccaccccaagctccccaagggtaagac 116
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||| |||||||| ||||| || ||||||||||| ||||| || |||||||||||||| Sbjct: 54398 atgggaaacagtgaggttggtcataatgctcttggtgctggtcgtatctttgctcaaggt 54339 Query: 363 gcgaagctt 371 || |||||| Sbjct: 54338 gctaagctt 54330 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 105 gaccaccccacgctccccaaggggaagac 133 |||||||||| |||||||||||| ||||| Sbjct: 54668 gaccaccccaagctccccaagggtaagac 54640
>emb|X75020.1|PAPHGLMU P.amygdalus mRNA for phosphoglycerate mutase Length = 1744 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 303 atgggcaacagtgaagttggccacaatgctcttggagctggccgaatctttgctcaaggc 362 ||||||||||||||||| |||||||| ||||| || || || || || ||||| || || Sbjct: 63 atgggcaacagtgaagtcggccacaacgctctcggtgccgggcgtatttttgcccagggt 122 Query: 363 gcgaagcttgttga 376 || ||||||||||| Sbjct: 123 gcaaagcttgttga 136
>emb|AJ544274.1|LME544274 Leishmania mexicana pgam gene for cofactor-independent phosphoglycerate mutase Length = 2046 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Plus Query: 294 gacgacgacatgggcaacagtgaagttggccacaa 328 |||| ||| ||||||||||||||||| |||||||| Sbjct: 272 gacgccgatatgggcaacagtgaagtcggccacaa 306
>ref|XM_532975.2| PREDICTED: Canis familiaris similar to CG4679-PA (LOC475765), mRNA Length = 2713 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 gggcaacagtgaagttggcca 325 ||||||||||||||||||||| Sbjct: 2481 gggcaacagtgaagttggcca 2461
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 ggaactgccgttggtctccca 290 ||||||||||||||||||||| Sbjct: 380274 ggaactgccgttggtctccca 380294
>gb|DQ061983.1| Burkholderia mallei strain ATCC 23344 GroEL (groEL) gene, complete cds Length = 1653 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gacggtggccgtcgtcgtgc 150 |||||||||||||||||||| Sbjct: 282 gacggtggccgtcgtcgtgc 263
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gacggtggccgtcgtcgtgc 150 |||||||||||||||||||| Sbjct: 2100026 gacggtggccgtcgtcgtgc 2100045
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gacggtggccgtcgtcgtgc 150 |||||||||||||||||||| Sbjct: 3483730 gacggtggccgtcgtcgtgc 3483749
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gccgtcgtcgtgctcgacgg 157 |||||||||||||||||||| Sbjct: 12749 gccgtcgtcgtgctcgacgg 12730
>gb|AC093775.2| Homo sapiens BAC clone RP11-138B9 from 7, complete sequence Length = 104892 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ttgttgatgctgctcttgct 389 |||||||||||||||||||| Sbjct: 5944 ttgttgatgctgctcttgct 5963
>gb|AC074271.24| Homo sapiens 3 BAC RP11-65D10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 63185 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 caacagtgaagttggccaca 327 |||||||||||||||||||| Sbjct: 21771 caacagtgaagttggccaca 21752
>gb|AY198338.1| Burkholderia pseudomallei GroEL gene, partial cds Length = 1618 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gacggtggccgtcgtcgtgc 150 |||||||||||||||||||| Sbjct: 282 gacggtggccgtcgtcgtgc 263
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gacggtggccgtcgtcgtgc 150 |||||||||||||||||||| Sbjct: 3224838 gacggtggccgtcgtcgtgc 3224857
>dbj|AB207102.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: N1141 Length = 66987 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tcgtcgtgctcgacggatgg 161 |||||||||||||||||||| Sbjct: 36016 tcgtcgtgctcgacggatgg 36035
>dbj|AB207101.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: K1 Length = 45779 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tcgtcgtgctcgacggatgg 161 |||||||||||||||||||| Sbjct: 33192 tcgtcgtgctcgacggatgg 33211
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagacggtggccgtcgtcg 147 |||||||||||||||||||| Sbjct: 1912980 gaagacggtggccgtcgtcg 1912999
>gb|AF287633.1|AF287633 Burkholderia pseudomallei chaperonin GroEL gene, complete cds Length = 1641 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gacggtggccgtcgtcgtgc 150 |||||||||||||||||||| Sbjct: 282 gacggtggccgtcgtcgtgc 263
>gb|AC093850.2| Homo sapiens BAC clone RP11-489P15 from 2, complete sequence Length = 131727 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tgaaggctcatggaactgcc 278 |||||||||||||||||||| Sbjct: 30836 tgaaggctcatggaactgcc 30855
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tggccgtcgtcgtgctcgac 155 |||||||||||||||||||| Sbjct: 6490704 tggccgtcgtcgtgctcgac 6490723
>emb|AL590328.2|CNS07EG5 Human chromosome 14 DNA sequence BAC R-818K5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175210 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caacagtgaagttggccaca 327 |||||||||||||||||||| Sbjct: 164521 caacagtgaagttggccaca 164540
>emb|AL121839.3|CNS01DSQ Human chromosome 14 DNA sequence BAC R-747H7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 200853 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 caacagtgaagttggccaca 327 |||||||||||||||||||| Sbjct: 60503 caacagtgaagttggccaca 60522
>gb|AY898625.1| Acidovorax avenae subsp. citrulli lytic murein transglycosylase, SAM-dependent methyltransferase, HrcC, HrpD5, HrpB1, HrpB2, HrcJ, HrpB4, HrpF, HrcN, hypothetical protein, GALA, HrcT, HrcU, HrcV, HpaP, HrcQ, HrcR, HrcS, HpaA, HpaB, HrpG, HrpX, and chorismate mutase genes, complete cds; anthranilate para-aminobenzoate synthase component I gene, partial cds; and unknown genes Length = 36584 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tcgtcgtgctcgacggatgg 161 |||||||||||||||||||| Sbjct: 30702 tcgtcgtgctcgacggatgg 30721 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,533,502 Number of Sequences: 3902068 Number of extensions: 2533502 Number of successful extensions: 46759 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46304 Number of HSP's gapped (non-prelim): 453 length of query: 399 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 377 effective length of database: 17,147,199,772 effective search space: 6464494314044 effective search space used: 6464494314044 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
