Clone Name | bastl07b11 |
---|---|
Clone Library Name | barley_pub |
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 77.4 bits (189), Expect = 2e-14 Identities = 40/57 (70%), Positives = 40/57 (70%) Frame = +3 Query: 288 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGR 458 MLPRKREIVAGEVEDLQKK MA RGNEIDEDLHSRQLAVYGR Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLAVYGR 57
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 77.0 bits (188), Expect = 2e-14 Identities = 40/57 (70%), Positives = 40/57 (70%) Frame = +3 Query: 288 MLPRKREIVAGEVEDLQKKXXXXXXXXXXXXXXXXMARRGNEIDEDLHSRQLAVYGR 458 MLPRKREIVAGEVEDLQKK MA RGNEIDEDLHSRQLAVYGR Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDEDLHSRQLAVYGR 57
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 36.2 bits (82), Expect = 0.041 Identities = 16/16 (100%), Positives = 16/16 (100%) Frame = +3 Query: 411 EIDEDLHSRQLAVYGR 458 EIDEDLHSRQLAVYGR Sbjct: 45 EIDEDLHSRQLAVYGR 60
>NUPL_XENLA (P05221) Nucleoplasmin| Length = 200 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/77 (24%), Positives = 30/77 (38%) Frame = -2 Query: 272 AEEPEDGRRRSEEQAVVDGRRELPRQIQRVRPPRNLHRPGTSXXXXXXXXXXXGRADPAE 93 A E + E++ +G E + + PP+ + RP + + D + Sbjct: 119 AMEEDYSWAEEEDEGEAEGEEEEEEEEDQESPPKAVKRPAATKKAGQAKKKKLDKEDESS 178 Query: 92 LTLDSPVASGKEAGEGR 42 DSP GK AG GR Sbjct: 179 EE-DSPTKKGKGAGRGR 194
>CP2DQ_RAT (P10634) Cytochrome P450 2D26 (EC 1.14.14.1) (CYPIID26) (P450-DB2)| (P450-CMF2) (Debrisoquine 4-hydroxylase) Length = 500 Score = 29.3 bits (64), Expect = 5.0 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -2 Query: 425 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 330 +LVDLV + PG +PLPG G LLQV Sbjct: 21 LLVDLVHRHKFWTAHYPPGPVPLPGLGNLLQV 52
>CP2DP_PIG (O46658) Cytochrome P450 2D25 (EC 1.14.14.-) (CYPIID25) (Vitamin| D(3) 25-hydroxylase) Length = 499 Score = 29.3 bits (64), Expect = 5.0 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -2 Query: 425 VLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 330 +LVDL+ + PG +PLPG G LLQV Sbjct: 20 LLVDLMHRRSRWAPRYPPGPMPLPGLGNLLQV 51
>FOXK2_HUMAN (Q01167) Forkhead box protein K2 (Interleukin enhancer-binding| factor 1) (Cellular transcription factor ILF-1) Length = 655 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -2 Query: 272 AEEPEDGRRRSEEQAVVDGRRELPRQIQRVRPPRNLHRPG 153 ++E G R + A + GR P ++ PPR+LH PG Sbjct: 43 SDEEALGDHRPQLVAGLGGREHGPLELHLPAPPRDLHAPG 82
>CP2DH_MACFA (Q29488) Cytochrome P450 2D17 (EC 1.14.14.1) (CYPIID17)| Length = 497 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -2 Query: 440 LATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 330 +A +LVDL+ + PG LPLPG G LL V Sbjct: 13 VAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49
>CP2D6_HUMAN (P10635) Cytochrome P450 2D6 (EC 1.14.14.1) (CYPIID6) (P450-DB1)| (Debrisoquine 4-hydroxylase) Length = 497 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -2 Query: 440 LATVQVLVDLVPPPCHGCVSFLPGRLPLPGAGFLLQV 330 +A +LVDL+ + PG LPLPG G LL V Sbjct: 13 VAIFLLLVDLMHRRQRWAARYPPGPLPLPGLGNLLHV 49 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,062,715 Number of Sequences: 219361 Number of extensions: 660460 Number of successful extensions: 2239 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2236 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)