ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194512.1| Oryza sativa (japonica cultivar-group) putative... 155 1e-34
2gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome... 155 1e-34
3gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 155 1e-34
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
5dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
6dbj|AK072615.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 155 1e-34
8ref|XM_508133.1| PREDICTED: Pan troglodytes similar to D1 dopami... 42 1.1
9gb|BC038978.1| Homo sapiens dopamine receptor D1 interacting pro... 42 1.1
10emb|AL360181.37| Human DNA sequence from clone RP11-122K13 on ch... 42 1.1
11emb|CR606939.1| full-length cDNA clone CS0DF029YL04 of Fetal bra... 42 1.1
12ref|NM_015722.2| Homo sapiens dopamine receptor D1 interacting p... 42 1.1
13gb|AF225903.1|AF225903 Homo sapiens D1 dopamine receptor interac... 42 1.1
14gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 4.4
15ref|NM_183626.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
16ref|XM_480012.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.4
17ref|XM_475850.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
18ref|XM_470409.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.4
19gb|AC139231.11| Mus musculus chromosome 1, clone RP24-87I22, com... 40 4.4
20gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 4.4
21gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.4
23emb|BX950226.13| Zebrafish DNA sequence from clone CH211-105P23 ... 40 4.4
24gb|AC114817.3| Mus musculus BAC clone RP23-28O15 from 14, comple... 40 4.4
25gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
26emb|CR513790.9| Zebrafish DNA sequence from clone CH211-132F7 in... 40 4.4
27emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 40 4.4
28emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 4.4
29emb|BX571758.10| Zebrafish DNA sequence from clone CH211-34K1 in... 40 4.4
30emb|BX572630.10| Zebrafish DNA sequence from clone CH211-24O10 i... 40 4.4
31gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
32ref|XM_945444.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 4.4
33ref|XM_934623.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 4.4
34dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
36dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
37dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
40gb|DQ011069.1| Oreochromis mossambicus cytochrome c oxidase subu... 40 4.4
41dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
42gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 40 4.4
43gb|AC068769.19| Homo sapiens 3 BAC RP11-14I2 (Roswell Park Cance... 40 4.4
44gb|DQ119602.1| Amphisbaena cubana HOXA13 (HOXA13) gene, partial cds 40 4.4
45gb|DQ119596.1| Xantusia riversiana HOXA13 (HOXA13) gene, partial... 40 4.4
46gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 40 4.4
47dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
48dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
49dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
50dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
51dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
52emb|BX465847.15| Mouse DNA sequence from clone RP23-102L14 on ch... 40 4.4
53dbj|AK121930.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
54dbj|AK106850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
55gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.4
56gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
57emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa... 40 4.4 
>ref|NM_194512.1| Oryza sativa (japonica cultivar-group) putative maize transposon
           MuDR mudrA-like protein (OSJNBa0071K19.12), mRNA
          Length = 2814

 Score =  155 bits (78), Expect = 1e-34
 Identities = 129/146 (88%)
 Strand = Plus / Plus

                                                                       
Query: 186 gccatttgccaacatggtggggagttcacttctggtcccaatgggaatctgatttacaaa 245
           |||||||||||  ||||||| |||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 382 gccatttgccagtatggtggagagttcacttctggccccaatggcaatttgatctacaaa 441

                                                                       
Query: 246 ggaggagaagcgcacgctgttgacgtctctcgggagatgtcccttgacagcttcaaggat 305
           ||||||||||| ||||||||||||||| | || |||||||| || || | ||||||||||
Sbjct: 442 ggaggagaagcacacgctgttgacgtcacacgagagatgtcactagataacttcaaggat 501

                                     
Query: 306 gaggtgtccaaagtgttccatgttga 331
           ||||||||||| ||||| ||||||||
Sbjct: 502 gaggtgtccaaggtgtttcatgttga 527
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>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19,
              complete sequence
          Length = 174752

 Score =  155 bits (78), Expect = 1e-34
 Identities = 129/146 (88%)
 Strand = Plus / Minus

                                                                          
Query: 186    gccatttgccaacatggtggggagttcacttctggtcccaatgggaatctgatttacaaa 245
              |||||||||||  ||||||| |||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 108840 gccatttgccagtatggtggagagttcacttctggccccaatggcaatttgatctacaaa 108781

                                                                          
Query: 246    ggaggagaagcgcacgctgttgacgtctctcgggagatgtcccttgacagcttcaaggat 305
              ||||||||||| ||||||||||||||| | || |||||||| || || | ||||||||||
Sbjct: 108780 ggaggagaagcacacgctgttgacgtcacacgagagatgtcactagataacttcaaggat 108721

                                        
Query: 306    gaggtgtccaaagtgttccatgttga 331
              ||||||||||| ||||| ||||||||
Sbjct: 108720 gaggtgtccaaggtgtttcatgttga 108695
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score =  155 bits (78), Expect = 1e-34
 Identities = 129/146 (88%)
 Strand = Plus / Minus

                                                                          
Query: 186    gccatttgccaacatggtggggagttcacttctggtcccaatgggaatctgatttacaaa 245
              |||||||||||  ||||||| |||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 343782 gccatttgccagtatggtggagagttcacttctggccccaatggcaatttgatctacaaa 343723

                                                                          
Query: 246    ggaggagaagcgcacgctgttgacgtctctcgggagatgtcccttgacagcttcaaggat 305
              ||||||||||| ||||||||||||||| | || |||||||| || || | ||||||||||
Sbjct: 343722 ggaggagaagcacacgctgttgacgtcacacgagagatgtcactagataacttcaaggat 343663

                                        
Query: 306    gaggtgtccaaagtgttccatgttga 331
              ||||||||||| ||||| ||||||||
Sbjct: 343662 gaggtgtccaaggtgtttcatgttga 343637
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score =  155 bits (78), Expect = 1e-34
 Identities = 129/146 (88%)
 Strand = Plus / Minus

                                                                          
Query: 186    gccatttgccaacatggtggggagttcacttctggtcccaatgggaatctgatttacaaa 245
              |||||||||||  ||||||| |||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 343782 gccatttgccagtatggtggagagttcacttctggccccaatggcaatttgatctacaaa 343723

                                                                          
Query: 246    ggaggagaagcgcacgctgttgacgtctctcgggagatgtcccttgacagcttcaaggat 305
              ||||||||||| ||||||||||||||| | || |||||||| || || | ||||||||||
Sbjct: 343722 ggaggagaagcacacgctgttgacgtcacacgagagatgtcactagataacttcaaggat 343663

                                        
Query: 306    gaggtgtccaaagtgttccatgttga 331
              ||||||||||| ||||| ||||||||
Sbjct: 343662 gaggtgtccaaggtgtttcatgttga 343637
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>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full
           insert sequence
          Length = 3614

 Score =  155 bits (78), Expect = 1e-34
 Identities = 129/146 (88%)
 Strand = Plus / Plus

                                                                       
Query: 186 gccatttgccaacatggtggggagttcacttctggtcccaatgggaatctgatttacaaa 245
           |||||||||||  ||||||| |||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 835 gccatttgccagtatggtggagagttcacttctggccccaatggcaatttgatctacaaa 894

                                                                       
Query: 246 ggaggagaagcgcacgctgttgacgtctctcgggagatgtcccttgacagcttcaaggat 305
           ||||||||||| ||||||||||||||| | || |||||||| || || | ||||||||||
Sbjct: 895 ggaggagaagcacacgctgttgacgtcacacgagagatgtcactagataacttcaaggat 954

                                     
Query: 306 gaggtgtccaaagtgttccatgttga 331
           ||||||||||| ||||| ||||||||
Sbjct: 955 gaggtgtccaaggtgtttcatgttga 980
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>dbj|AK072615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134C11, full
           insert sequence
          Length = 3124

 Score =  155 bits (78), Expect = 1e-34
 Identities = 129/146 (88%)
 Strand = Plus / Plus

                                                                       
Query: 186 gccatttgccaacatggtggggagttcacttctggtcccaatgggaatctgatttacaaa 245
           |||||||||||  ||||||| |||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 309 gccatttgccagtatggtggagagttcacttctggccccaatggcaatttgatctacaaa 368

                                                                       
Query: 246 ggaggagaagcgcacgctgttgacgtctctcgggagatgtcccttgacagcttcaaggat 305
           ||||||||||| ||||||||||||||| | || |||||||| || || | ||||||||||
Sbjct: 369 ggaggagaagcacacgctgttgacgtcacacgagagatgtcactagataacttcaaggat 428

                                     
Query: 306 gaggtgtccaaagtgttccatgttga 331
           ||||||||||| ||||| ||||||||
Sbjct: 429 gaggtgtccaaggtgtttcatgttga 454
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  155 bits (78), Expect = 1e-34
 Identities = 129/146 (88%)
 Strand = Plus / Minus

                                                                          
Query: 186    gccatttgccaacatggtggggagttcacttctggtcccaatgggaatctgatttacaaa 245
              |||||||||||  ||||||| |||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 343779 gccatttgccagtatggtggagagttcacttctggccccaatggcaatttgatctacaaa 343720

                                                                          
Query: 246    ggaggagaagcgcacgctgttgacgtctctcgggagatgtcccttgacagcttcaaggat 305
              ||||||||||| ||||||||||||||| | || |||||||| || || | ||||||||||
Sbjct: 343719 ggaggagaagcacacgctgttgacgtcacacgagagatgtcactagataacttcaaggat 343660

                                        
Query: 306    gaggtgtccaaagtgttccatgttga 331
              ||||||||||| ||||| ||||||||
Sbjct: 343659 gaggtgtccaaggtgtttcatgttga 343634
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>ref|XM_508133.1| PREDICTED: Pan troglodytes similar to D1 dopamine
           receptor-interacting protein calcyon (LOC450851), mRNA
          Length = 814

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  gcggcggcggcggccaccgaa 83
           |||||||||||||||||||||
Sbjct: 543 gcggcggcggcggccaccgaa 563
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>gb|BC038978.1| Homo sapiens dopamine receptor D1 interacting protein, mRNA (cDNA
           clone MGC:47621 IMAGE:5734358), complete cds
          Length = 921

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  gcggcggcggcggccaccgaa 83
           |||||||||||||||||||||
Sbjct: 609 gcggcggcggcggccaccgaa 629
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>emb|AL360181.37| Human DNA sequence from clone RP11-122K13 on chromosome 10 Contains the
             5' end of the TUBGCP2 gene for tubulin gamma complex
             associated protein 2, the gene for a novel protein, the
             gene for calcyon D1 dopamine receptor-interacting protein
             (CALCYON), an autointegration factor (BANF1) pseudogene, a
             novel gene, the gene for uterine-specific proline-rich
             acidic protein (UPA), gene FLJ34392, the ECHS1 gene for
             enoyl Coenzyme A hydratase, short chain, 1, mitachondrial,
             the gene for peroxisomal N1-acetyl-spermine/spermidine
             oxidase (PAO), a novel gene, the 5' end of a novel gene
             (LOC92170) and ten CpG islands, complete sequence
          Length = 116311

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    gcggcggcggcggccaccgaa 83
             |||||||||||||||||||||
Sbjct: 33444 gcggcggcggcggccaccgaa 33424
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>emb|CR606939.1| full-length cDNA clone CS0DF029YL04 of Fetal brain of Homo sapiens
           (human)
          Length = 922

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  gcggcggcggcggccaccgaa 83
           |||||||||||||||||||||
Sbjct: 651 gcggcggcggcggccaccgaa 671
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>ref|NM_015722.2| Homo sapiens dopamine receptor D1 interacting protein (DRD1IP),
           mRNA
          Length = 915

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  gcggcggcggcggccaccgaa 83
           |||||||||||||||||||||
Sbjct: 645 gcggcggcggcggccaccgaa 665
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>gb|AF225903.1|AF225903 Homo sapiens D1 dopamine receptor interacting protein calcyon mRNA,
           complete cds
          Length = 915

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  gcggcggcggcggccaccgaa 83
           |||||||||||||||||||||
Sbjct: 645 gcggcggcggcggccaccgaa 665
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 62      cgcggcggcggcggccaccg 81
               ||||||||||||||||||||
Sbjct: 2007682 cgcggcggcggcggccaccg 2007701
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>ref|NM_183626.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  gcggcggcggcggccaccga 82
           ||||||||||||||||||||
Sbjct: 331 gcggcggcggcggccaccga 350
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>ref|XM_480012.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 804

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  gcggcggcggcggccaccga 82
           ||||||||||||||||||||
Sbjct: 129 gcggcggcggcggccaccga 148
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>ref|XM_475850.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1185

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   cgcggcggcggcggccaccg 81
            ||||||||||||||||||||
Sbjct: 1002 cgcggcggcggcggccaccg 983
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>ref|XM_470409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1698

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  gcggcggcggcggccaccga 82
           ||||||||||||||||||||
Sbjct: 221 gcggcggcggcggccaccga 202
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>gb|AC139231.11| Mus musculus chromosome 1, clone RP24-87I22, complete sequence
          Length = 191438

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   agatgtcccttgacagcttc 299
             ||||||||||||||||||||
Sbjct: 60129 agatgtcccttgacagcttc 60110
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      cgcggcggcggcggccaccg 81
               ||||||||||||||||||||
Sbjct: 1317765 cgcggcggcggcggccaccg 1317746
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>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
             complete sequence
          Length = 177861

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    cgcggcggcggcggccaccg 81
             ||||||||||||||||||||
Sbjct: 15058 cgcggcggcggcggccaccg 15039
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 63       gcggcggcggcggccaccga 82
                ||||||||||||||||||||
Sbjct: 35486467 gcggcggcggcggccaccga 35486448
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>emb|BX950226.13| Zebrafish DNA sequence from clone CH211-105P23 in linkage group 7,
              complete sequence
          Length = 174681

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    aatgggaatctgatttacaa 244
              ||||||||||||||||||||
Sbjct: 173416 aatgggaatctgatttacaa 173397
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>gb|AC114817.3| Mus musculus BAC clone RP23-28O15 from 14, complete sequence
          Length = 211624

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    tgaggtgtccaaagtgttcc 324
              ||||||||||||||||||||
Sbjct: 167411 tgaggtgtccaaagtgttcc 167430
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>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
             complete sequence
          Length = 141715

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    cgcggcggcggcggccaccg 81
             ||||||||||||||||||||
Sbjct: 90243 cgcggcggcggcggccaccg 90224
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>emb|CR513790.9| Zebrafish DNA sequence from clone CH211-132F7 in linkage group 15,
             complete sequence
          Length = 157412

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   atgggaatctgatttacaaa 245
             ||||||||||||||||||||
Sbjct: 18450 atgggaatctgatttacaaa 18469
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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     cgcggcggcggcggccaccg 81
              ||||||||||||||||||||
Sbjct: 284491 cgcggcggcggcggccaccg 284472
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>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
            5/14
          Length = 299450

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   cgcggcggcggcggccaccg 81
            ||||||||||||||||||||
Sbjct: 4928 cgcggcggcggcggccaccg 4909
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>emb|BX571758.10| Zebrafish DNA sequence from clone CH211-34K1 in linkage group 15,
             complete sequence
          Length = 104614

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   atgggaatctgatttacaaa 245
             ||||||||||||||||||||
Sbjct: 27705 atgggaatctgatttacaaa 27724
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>emb|BX572630.10| Zebrafish DNA sequence from clone CH211-24O10 in linkage group 15,
             complete sequence
          Length = 174316

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   atgggaatctgatttacaaa 245
             ||||||||||||||||||||
Sbjct: 42875 atgggaatctgatttacaaa 42856
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>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
              complete sequence
          Length = 166218

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     cgcggcggcggcggccaccg 81
              ||||||||||||||||||||
Sbjct: 114746 cgcggcggcggcggccaccg 114727
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>ref|XM_945444.1| PREDICTED: Homo sapiens hypothetical protein LOC652373
          (LOC652373), mRNA
          Length = 837

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 gcggcggcggcggccaccga 82
          ||||||||||||||||||||
Sbjct: 47 gcggcggcggcggccaccga 66
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>ref|XM_934623.1| PREDICTED: Homo sapiens hypothetical protein LOC647263
          (LOC647263), mRNA
          Length = 837

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 gcggcggcggcggccaccga 82
          ||||||||||||||||||||
Sbjct: 47 gcggcggcggcggccaccga 66
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      cgcggcggcggcggccaccg 81
               ||||||||||||||||||||
Sbjct: 2207820 cgcggcggcggcggccaccg 2207801
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 63      gcggcggcggcggccaccga 82
               ||||||||||||||||||||
Sbjct: 2197833 gcggcggcggcggccaccga 2197814
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 63       gcggcggcggcggccaccga 82
                ||||||||||||||||||||
Sbjct: 28765629 gcggcggcggcggccaccga 28765610



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 63       gcggcggcggcggccaccga 82
                ||||||||||||||||||||
Sbjct: 19745724 gcggcggcggcggccaccga 19745743
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 62       cgcggcggcggcggccaccg 81
                ||||||||||||||||||||
Sbjct: 27083662 cgcggcggcggcggccaccg 27083643
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 63       gcggcggcggcggccaccga 82
                ||||||||||||||||||||
Sbjct: 35576539 gcggcggcggcggccaccga 35576520
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 63       gcggcggcggcggccaccga 82
                ||||||||||||||||||||
Sbjct: 10664216 gcggcggcggcggccaccga 10664197
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>gb|DQ011069.1| Oreochromis mossambicus cytochrome c oxidase subunit Va
           preprotein-like mRNA, partial sequence
          Length = 306

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 ccttgacagcttcaaggatg 306
           ||||||||||||||||||||
Sbjct: 213 ccttgacagcttcaaggatg 232
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>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0706B05
          Length = 187835

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     gcggcggcggcggccaccga 82
              ||||||||||||||||||||
Sbjct: 158839 gcggcggcggcggccaccga 158820
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>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence,
            complete sequence
          Length = 133846

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   gcggcggcggcggccaccga 82
            ||||||||||||||||||||
Sbjct: 1159 gcggcggcggcggccaccga 1178
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>gb|AC068769.19| Homo sapiens 3 BAC RP11-14I2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191246

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     gcggcggcggcggccaccga 82
              ||||||||||||||||||||
Sbjct: 156766 gcggcggcggcggccaccga 156785
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>gb|DQ119602.1| Amphisbaena cubana HOXA13 (HOXA13) gene, partial cds
          Length = 402

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  gcggcggcggcggccaccga 82
           ||||||||||||||||||||
Sbjct: 380 gcggcggcggcggccaccga 361
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>gb|DQ119596.1| Xantusia riversiana HOXA13 (HOXA13) gene, partial cds
          Length = 394

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  gcggcggcggcggccaccga 82
           ||||||||||||||||||||
Sbjct: 372 gcggcggcggcggccaccga 353
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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    gcggcggcggcggccaccga 82
             ||||||||||||||||||||
Sbjct: 19430 gcggcggcggcggccaccga 19411
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>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_D01
          Length = 97862

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    gcggcggcggcggccaccga 82
             ||||||||||||||||||||
Sbjct: 76095 gcggcggcggcggccaccga 76076
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    gcggcggcggcggccaccga 82
             ||||||||||||||||||||
Sbjct: 73404 gcggcggcggcggccaccga 73385
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>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0551A03
          Length = 173027

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    gcggcggcggcggccaccga 82
             ||||||||||||||||||||
Sbjct: 12769 gcggcggcggcggccaccga 12788
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>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0001B21
          Length = 143722

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     gcggcggcggcggccaccga 82
              ||||||||||||||||||||
Sbjct: 130180 gcggcggcggcggccaccga 130199
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0622F03
          Length = 170064

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     gcggcggcggcggccaccga 82
              ||||||||||||||||||||
Sbjct: 166195 gcggcggcggcggccaccga 166176
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>emb|BX465847.15| Mouse DNA sequence from clone RP23-102L14 on chromosome X, complete
              sequence
          Length = 206399

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    atttacaaaggaggagaagc 256
              ||||||||||||||||||||
Sbjct: 135005 atttacaaaggaggagaagc 135024
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>dbj|AK121930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K22, full
           insert sequence
          Length = 1916

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  gcggcggcggcggccaccga 82
           ||||||||||||||||||||
Sbjct: 227 gcggcggcggcggccaccga 208
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>dbj|AK106850.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A11, full
           insert sequence
          Length = 1617

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  gcggcggcggcggccaccga 82
           ||||||||||||||||||||
Sbjct: 553 gcggcggcggcggccaccga 572
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      cgcggcggcggcggccaccg 81
               ||||||||||||||||||||
Sbjct: 1363585 cgcggcggcggcggccaccg 1363566
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      cgcggcggcggcggccaccg 81
               ||||||||||||||||||||
Sbjct: 2215601 cgcggcggcggcggccaccg 2215582
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>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 125593

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     cgcggcggcggcggccaccg 81
              ||||||||||||||||||||
Sbjct: 104514 cgcggcggcggcggccaccg 104495


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,754,999
Number of Sequences: 3902068
Number of extensions: 2754999
Number of successful extensions: 184115
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 180486
Number of HSP's gapped (non-prelim): 3629
length of query: 336
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 314
effective length of database: 17,147,199,772
effective search space: 5384220728408
effective search space used: 5384220728408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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