ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl07b06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 ||||||||||||||||||||||||| Sbjct: 27146508 cgcctcctccccctcgccgccgccg 27146532 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 21414080 cctccccctcgccgccgccg 21414061
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 ||||||||||||||||||||||||| Sbjct: 3524 cgcctcctccccctcgccgccgccg 3548
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 ||||||||||||||||||||||||| Sbjct: 115318 cgcctcctccccctcgccgccgccg 115342
>ref|XM_478215.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1361 Score = 46.1 bits (23), Expect = 0.082 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccgacgtctcc 254 |||||||| |||||||||||||| ||||||| Sbjct: 39 cctcctcctcctcgccgccgccgccgtctcc 69
>ref|NM_186306.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 223 gcctcctccccctcgccgccgccgacg 249 |||||||| |||||||||||||||||| Sbjct: 812 gcctcctcaccctcgccgccgccgacg 786
>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10, complete sequence Length = 165400 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccg 246 ||||||||||||||||||||||| Sbjct: 3920 cctcctccccctcgccgccgccg 3942
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccg 246 ||||||||||||||||||||||| Sbjct: 3099481 cctcctccccctcgccgccgccg 3099503 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 34239431 cctccccctcgccgccgccg 34239412 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 30991107 cctccccctcgccgccgccg 30991126 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 30264350 cctcctccccctcgccgccg 30264369 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 ctcgccgccgccgacgtctc 253 |||||||||||||||||||| Sbjct: 22622736 ctcgccgccgccgacgtctc 22622717
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.082 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccgacgtctcc 254 |||||||| |||||||||||||| ||||||| Sbjct: 18564750 cctcctcctcctcgccgccgccgccgtctcc 18564780 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 223 gcctcctccccctcgccgccgccgacg 249 |||||||| |||||||||||||||||| Sbjct: 2393873 gcctcctcaccctcgccgccgccgacg 2393847 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tcctccccctcgccgccgccg 246 ||||||||||||||||||||| Sbjct: 27727982 tcctccccctcgccgccgccg 27727962 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 5631473 cctcctcctcctcgccgccgccgtcgtc 5631446
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 46.1 bits (23), Expect = 0.082 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccgacgtctcc 254 |||||||| |||||||||||||| ||||||| Sbjct: 17292 cctcctcctcctcgccgccgccgccgtctcc 17322
>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1457_D07 Length = 103688 Score = 46.1 bits (23), Expect = 0.082 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccgacgtctcc 254 |||||||| |||||||||||||| ||||||| Sbjct: 93506 cctcctcctcctcgccgccgccgccgtctcc 93536
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 223 gcctcctccccctcgccgccgccgacg 249 |||||||| |||||||||||||||||| Sbjct: 96881 gcctcctcaccctcgccgccgccgacg 96855
>dbj|AK064235.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H11, full insert sequence Length = 1361 Score = 46.1 bits (23), Expect = 0.082 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccgacgtctcc 254 |||||||| |||||||||||||| ||||||| Sbjct: 39 cctcctcctcctcgccgccgccgccgtctcc 69
>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07, complete sequence Length = 165094 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccg 246 ||||||||||||||||||||||| Sbjct: 160556 cctcctccccctcgccgccgccg 160578
>ref|XM_483020.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccgacgtc 251 |||||||||| |||||||||||||| |||| Sbjct: 40 cgcctcctcctcctcgccgccgccgccgtc 69
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccgacg 249 |||||||| ||||||||||||||||| Sbjct: 30391 cctcctcctcctcgccgccgccgacg 30416
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccgacgtc 251 |||||||||| |||||||||||||| |||| Sbjct: 23913888 cgcctcctcctcctcgccgccgccgccgtc 23913917 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 cgcctcctccccctcgccgccgccg 246 |||||||||||| |||||||||||| Sbjct: 5984421 cgcctcctccccgtcgccgccgccg 5984397 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 |||||||||||| |||||||||||| Sbjct: 350816 cgcctcctccccgtcgccgccgccg 350840
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccgacg 249 |||||||| ||||||||||||||||| Sbjct: 2545505 cctcctcctcctcgccgccgccgacg 2545530 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 gcctcctccccctcgccgccgccg 246 |||||||| ||||||||||||||| Sbjct: 24092339 gcctcctctccctcgccgccgccg 24092316
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccgacgtc 251 |||||||||| |||||||||||||| |||| Sbjct: 105592 cgcctcctcctcctcgccgccgccgccgtc 105621
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccgacgtc 251 |||||||||| |||||||||||||| |||| Sbjct: 47039 cgcctcctcctcctcgccgccgccgccgtc 47068
>dbj|AK107957.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-C05, full insert sequence Length = 819 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccgacg 249 |||||||| ||||||||||||||||| Sbjct: 363 cctcctcctcctcgccgccgccgacg 338
>ref|XM_479704.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1449 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 |||||||||||| |||||||||||| Sbjct: 49 cgcctcctccccgtcgccgccgccg 73
>ref|XM_464924.1| Oryza sativa (japonica cultivar-group), mRNA Length = 483 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgc 244 ||||||||||||||||||||| Sbjct: 331 cctcctccccctcgccgccgc 351
>ref|XM_464216.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cccctcgccgccgccgacgtc 251 ||||||||||||||||||||| Sbjct: 45 cccctcgccgccgccgacgtc 25
>ref|NM_185999.2| Oryza sativa (japonica cultivar-group), mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tcctccccctcgccgccgccg 246 ||||||||||||||||||||| Sbjct: 508 tcctccccctcgccgccgccg 488
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 ||||||| ||||||||||||||||| Sbjct: 31856396 cgcctccgccccctcgccgccgccg 31856420 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 30464533 cctccccctcgccgccgccg 30464552 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cctcgccgccgccgacgtctccgt 256 |||||||||||||| ||||||||| Sbjct: 15837737 cctcgccgccgccggcgtctccgt 15837760
>gb|AC019193.7| Homo sapiens BAC clone RP11-335L23 from 4, complete sequence Length = 177720 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgc 244 ||||||||||||||||||||| Sbjct: 120165 cctcctccccctcgccgccgc 120145
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 ||||||| ||||||||||||||||| Sbjct: 31946912 cgcctccgccccctcgccgccgccg 31946936 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 30555955 cctccccctcgccgccgccg 30555974 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cctcgccgccgccgacgtctccgt 256 |||||||||||||| ||||||||| Sbjct: 15832271 cctcgccgccgccggcgtctccgt 15832294
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 gcctcctccccctcgccgccgccga 247 |||||||| |||||||||||||||| Sbjct: 27174341 gcctcctcaccctcgccgccgccga 27174365 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgc 244 ||||||||||||||||||||| Sbjct: 10050562 cctcctccccctcgccgccgc 10050582 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cccctcgccgccgccgacgtc 251 ||||||||||||||||||||| Sbjct: 3459487 cccctcgccgccgccgacgtc 3459467 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctcctccccctcgccgccgc 244 |||||||||||||||||||| Sbjct: 21563078 ctcctccccctcgccgccgc 21563097 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 17563898 cctccccctcgccgccgccg 17563879
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tcctccccctcgccgccgccg 246 ||||||||||||||||||||| Sbjct: 20361 tcctccccctcgccgccgccg 20341
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 cgcctcctccccctcgccgccgccg 246 |||||||||||| |||||||||||| Sbjct: 171531 cgcctcctccccgtcgccgccgccg 171507
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tcctccccctcgccgccgccg 246 ||||||||||||||||||||| Sbjct: 107084 tcctccccctcgccgccgccg 107064
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 gcctcctccccctcgccgccgccga 247 |||||||| |||||||||||||||| Sbjct: 70790 gcctcctcaccctcgccgccgccga 70814
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 gcctcctccccctcgccgccgccga 247 |||||||| |||||||||||||||| Sbjct: 25012 gcctcctcaccctcgccgccgccga 25036
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 cgcctcctccccctcgccgccgccg 246 |||||||||||| |||||||||||| Sbjct: 35233 cgcctcctccccgtcgccgccgccg 35209
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cccctcgccgccgccgacgtc 251 ||||||||||||||||||||| Sbjct: 4282 cccctcgccgccgccgacgtc 4262
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12 Length = 122214 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cccctcgccgccgccgacgtc 251 ||||||||||||||||||||| Sbjct: 72310 cccctcgccgccgccgacgtc 72290
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgc 244 ||||||||||||||||||||| Sbjct: 125255 cctcctccccctcgccgccgc 125275
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 |||||||||||| |||||||||||| Sbjct: 60330 cgcctcctccccgtcgccgccgccg 60354
>dbj|AP004157.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1114_D06 Length = 107621 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 cgcctcctccccctcgccgccgccg 246 |||||||||||| |||||||||||| Sbjct: 77524 cgcctcctccccgtcgccgccgccg 77500
>dbj|AK106362.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B02, full insert sequence Length = 1569 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 ||||||| ||||||||||||||||| Sbjct: 85 cgcctccgccccctcgccgccgccg 109
>dbj|AK069789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034O04, full insert sequence Length = 938 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tcctccccctcgccgccgccg 246 ||||||||||||||||||||| Sbjct: 507 tcctccccctcgccgccgccg 487
>dbj|AK066707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074F23, full insert sequence Length = 1509 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 ||||||| ||||||||||||||||| Sbjct: 40 cgcctccgccccctcgccgccgccg 64
>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete sequence Length = 150663 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgccg 246 ||||||| ||||||||||||||||| Sbjct: 57649 cgcctccgccccctcgccgccgccg 57673
>ref|XM_466299.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3008 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctcctccccctcgccgccgc 244 |||||||||||||||||||| Sbjct: 77 ctcctccccctcgccgccgc 96
>ref|XM_465806.1| Oryza sativa (japonica cultivar-group), mRNA Length = 589 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 90 cctccccctcgccgccgccg 71
>ref|NM_196906.1| Oryza sativa (japonica cultivar-group) putative WD domain containing protein (OSJNBa0071K18.5), mRNA Length = 2350 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 281 tcctccccctcgccgccgcc 262
>ref|NM_196543.1| Oryza sativa (japonica cultivar-group) putative CCR4-associated factor (OSJNBa0053G13.17), mRNA Length = 2955 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 1826 cctcctcctcctcgccgccgccga 1849
>ref|NM_196533.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053G13.7), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 719 cctcctcctcctcgccgccgccga 742
>ref|XM_469736.1| Oryza sativa (japonica cultivar-group), mRNA Length = 808 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 268 cctccccctcgccgccgccg 249
>ref|XM_477056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 361 cctcctcctcctcgccgccgccgtcgtc 334
>ref|XM_473851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2604 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 238 cctccccctcgccgccgccg 219
>ref|XM_470862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1176 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cctcgccgccgccgacgtctccgt 256 |||||||||||||| ||||||||| Sbjct: 186 cctcgccgccgccggcgtctccgt 209
>gb|AF172282.1| Oryza sativa adh1-adh2 region Length = 339485 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 199616 tcctccccctcgccgccgcc 199597
>gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' region photosynthesis gene cluster, partial sequence Length = 24637 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccctcgccgccgccgacgtc 251 |||||||||||||||||||| Sbjct: 2172 ccctcgccgccgccgacgtc 2153
>gb|AY023470.1| Oryza sativa microsatellite MRG5795 containing (TCG)X12, genomic sequence Length = 236 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 38 tcctccccctcgccgccgcc 57
>gb|AY022756.1| Oryza sativa microsatellite MRG5081 containing (CCT)X9, closest to marker R3113, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 116 cctcctcctcctcgccgccgccgtcgtc 143
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 40.1 bits (20), Expect = 5.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 223 gcctcctccccctc-gccgccgccgacg 249 |||||||||||||| ||||||||||||| Sbjct: 86887 gcctcctccccctccgccgccgccgacg 86914
>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24 map S20116S, complete sequence Length = 174210 Score = 40.1 bits (20), Expect = 5.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 223 gcctcctccccctc-gccgccgccgacg 249 |||||||||||||| ||||||||||||| Sbjct: 10069 gcctcctccccctccgccgccgccgacg 10096
>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10, complete sequence Length = 152423 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cctcgccgccgccgacgtctccgt 256 |||||||||||||| ||||||||| Sbjct: 99537 cctcgccgccgccggcgtctccgt 99560
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 gcctcctccccctcgccgccgccg 246 |||||||| ||||||||||||||| Sbjct: 160828 gcctcctctccctcgccgccgccg 160805
>gb|AY578179.1| Gallus gallus 11-beta-hydroxysteroid dehydrogenase type 3 (11-beta-HSD3) mRNA, complete cds Length = 1193 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ctgcgccgcggccgtcgccc 363 |||||||||||||||||||| Sbjct: 1017 ctgcgccgcggccgtcgccc 1036
>gb|AC123523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051P13, complete sequence Length = 142241 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 136946 tcctccccctcgccgccgcc 136965
>ref|XM_547212.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 2610003J06 (LOC490091), mRNA Length = 834 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 gaggaagagctctgcgccgtggag 300 |||||||||| ||||||||||||| Sbjct: 154 gaggaagagcgctgcgccgtggag 177
>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold Length = 574594 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccctcgccgccgccgacgtc 251 |||||||||||||||||||| Sbjct: 548265 ccctcgccgccgccgacgtc 548246
>gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051B13, complete sequence Length = 178000 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 21523 tcctccccctcgccgccgcc 21542
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 137465 cctcctccacctcgccgccgccga 137488
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 50067 tcctccccctcgccgccgcc 50048
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 cctgcgccgcggccgtcgcccgcg 366 ||||| |||||||||||||||||| Sbjct: 1453035 cctgccccgcggccgtcgcccgcg 1453058
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 ctcgccgccgccgacgtctc 253 |||||||||||||||||||| Sbjct: 64836 ctcgccgccgccgacgtctc 64817
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 88480 cctccccctcgccgccgccg 88499
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 150813 cctccccctcgccgccgccg 150794
>emb|AJ630366.1| Canis familiaris MHC class II region on chromosome CFA12, partial sequence, BAC clone 21p19, containing partial col11a2 gene, RXRB, SLC39A7, HSD17B8, RING1, VPS52, RPS18 and B3GALT4 genes, C12H6orf11 ORF, KE2, RAB2L, TAPBP, ZNF297 and DAXX genes Length = 143626 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 gccccaatcccaaacctcta 31 |||||||||||||||||||| Sbjct: 38175 gccccaatcccaaacctcta 38194
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 12482 cctccccctcgccgccgccg 12463
>dbj|AP009046.1| Hyphantria cunea nucleopolyhedrovirus genomic DNA, complete genome Length = 132959 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 gccgtcgcccgcgtccgctg 373 |||||||||||||||||||| Sbjct: 96215 gccgtcgcccgcgtccgctg 96196
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 85631 cctccccctcgccgccgccg 85650
>gb|AY728249.1| Uncultured organism clone 1113-1-12 unknown PCR product Length = 197 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gccgcggccgtcgcccgcgtccgc 371 |||||||||||||||| ||||||| Sbjct: 60 gccgcggccgtcgccctcgtccgc 37
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 9179125 cctcctccccctcgccgccg 9179106 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 5070456 cctcctcctcctcgccgccgccgccgtc 5070429
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 26452255 cctcctccacctcgccgccgccga 26452232 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 5476405 tcctccccctcgccgccgcc 5476424 Score = 40.1 bits (20), Expect = 5.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 223 gcctcctccccctc-gccgccgccgacg 249 |||||||||||||| ||||||||||||| Sbjct: 3492932 gcctcctccccctccgccgccgccgacg 3492959
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 16610175 tcctccccctcgccgccgcc 16610194 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 14362454 cctcctcctcctcgccgccgccga 14362477 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 14289747 cctcctcctcctcgccgccgccga 14289724
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgcc 245 |||||||||| ||||||||||||| Sbjct: 16261289 cgcctcctccgcctcgccgccgcc 16261312 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 14548212 cctcctcctcctcgccgccgccgccgtc 14548185
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 5769114 cctccccctcgccgccgccg 5769133
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 109729 cctcctcctcctcgccgccgccga 109752 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 37022 cctcctcctcctcgccgccgccga 36999
>gb|AE004766.1| Pseudomonas aeruginosa PAO1, section 327 of 529 of the complete genome Length = 14138 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 tccccctcgccgccgccgac 248 |||||||||||||||||||| Sbjct: 5981 tccccctcgccgccgccgac 6000
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctcctccccctcgccgccgc 244 |||||||||||||||||||| Sbjct: 52028 ctcctccccctcgccgccgc 52047
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctcctccccctcgccgccgc 244 |||||||||||||||||||| Sbjct: 158005 ctcctccccctcgccgccgc 158024
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 93816 cctccccctcgccgccgccg 93835
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 46501 cctcctcctcctcgccgccgccgccgtc 46474
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 48580 cctccccctcgccgccgccg 48561
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 cgcctcctccccctcgccgccgcc 245 |||||||||| ||||||||||||| Sbjct: 77805 cgcctcctccgcctcgccgccgcc 77828
>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_D09 Length = 124026 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 33816 cctccccctcgccgccgccg 33797
>dbj|AK111799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109D12, full insert sequence Length = 3080 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ctcgccgccgccgacgtctc 253 |||||||||||||||||||| Sbjct: 45 ctcgccgccgccgacgtctc 64
>ref|NM_001001201.1| Gallus gallus 11-beta-hydroxysteroid dehydrogenase type 3 (11-BETA-HSD3), mRNA Length = 1193 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ctgcgccgcggccgtcgccc 363 |||||||||||||||||||| Sbjct: 1017 ctgcgccgcggccgtcgccc 1036
>dbj|AK106324.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E12, full insert sequence Length = 744 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 69 cctcctcctcctcgccgccgccgccgtc 96
>dbj|AK103099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118N06, full insert sequence Length = 2358 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 61 cctccccctcgccgccgccg 80
>dbj|AK102754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106P12, full insert sequence Length = 3009 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctcctccccctcgccgccgc 244 |||||||||||||||||||| Sbjct: 77 ctcctccccctcgccgccgc 96
>dbj|AK101180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029E20, full insert sequence Length = 2834 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 420 cctcctccccctcgccgccg 401
>dbj|AK100672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112N09, full insert sequence Length = 3130 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 417 cctccccctcgccgccgccg 398
>dbj|AK099115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C07, full insert sequence Length = 3784 Score = 40.1 bits (20), Expect = 5.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 223 gcctcctccccct-cgccgccgccgacg 249 ||||||||||||| |||||||||||||| Sbjct: 249 gcctcctccccctccgccgccgccgacg 222
>dbj|AK072303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024H09, full insert sequence Length = 3631 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 140 cctcctccccctcgccgccg 121
>dbj|AK068906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M22, full insert sequence Length = 2514 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 396 tcctccccctcgccgccgcc 377
>dbj|AK067763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120K02, full insert sequence Length = 875 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 55 cctccccctcgccgccgccg 74
>dbj|AK064003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G01, full insert sequence Length = 2108 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 37 cctccccctcgccgccgccg 56
>dbj|AK062702.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-B03, full insert sequence Length = 715 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 cctcgccgccgccgacgtctccgt 256 ||||||||||||||||| |||||| Sbjct: 160 cctcgccgccgccgacgcctccgt 137
>dbj|AK060733.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A09, full insert sequence Length = 2400 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 338 cctcctccccctcgccgccg 319
>dbj|AK059542.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E12, full insert sequence Length = 589 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 90 cctccccctcgccgccgccg 71
>dbj|AK058795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H05, full insert sequence Length = 886 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 366 cctccccctcgccgccgccg 347
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 93165 cctcctcctcctcgccgccgccgtcgtc 93138
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete sequence Length = 95419 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 22070 cctccccctcgccgccgccg 22051
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 16618416 tcctccccctcgccgccgcc 16618435 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 14370696 cctcctcctcctcgccgccgccga 14370719 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 14297989 cctcctcctcctcgccgccgccga 14297966
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccga 247 |||||||| ||||||||||||||| Sbjct: 26777519 cctcctccacctcgccgccgccga 26777496 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcctccccctcgccgccgcc 245 |||||||||||||||||||| Sbjct: 5542882 tcctccccctcgccgccgcc 5542901 Score = 40.1 bits (20), Expect = 5.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 223 gcctcctccccctc-gccgccgccgacg 249 |||||||||||||| ||||||||||||| Sbjct: 3501636 gcctcctccccctccgccgccgccgacg 3501663
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 9179010 cctcctccccctcgccgccg 9178991 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 5070438 cctcctcctcctcgccgccgccgccgtc 5070411
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 160651 cctcctccccctcgccgccg 160670
>emb|AL713954.3|CNS07YPZ Oryza sativa chromosome 12, . BAC OJ1134_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121600 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 27720 cctcctccccctcgccgccg 27739
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 14246 cctcctccccctcgccgccg 14265
>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 112231 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccgccgacgtc 251 |||||||| |||||||||||||| |||| Sbjct: 41109 cctcctcctcctcgccgccgccgccgtc 41082
>emb|AL731760.2|CNS07YPJ Oryza sativa chromosome 12, . BAC OJ1005_C11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104533 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cctcctccccctcgccgccg 243 |||||||||||||||||||| Sbjct: 35015 cctcctccccctcgccgccg 34996
>emb|AL672259.9| Mouse DNA sequence from clone RP23-169M4 on chromosome 2, complete sequence Length = 179832 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cctccccctcgccgccgccg 246 |||||||||||||||||||| Sbjct: 16831 cctccccctcgccgccgccg 16850
>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds, stain:IL144 Length = 58996 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccctcgccgccgccgacgtc 251 |||||||||||||||||||| Sbjct: 11525 ccctcgccgccgccgacgtc 11506
>dbj|AB069856.1| Hyphantria cunea nuclear polyhedrosis virus HC-pcna gene for proliferating cell nuclear antigen, complete cds Length = 933 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 gccgtcgcccgcgtccgctg 373 |||||||||||||||||||| Sbjct: 705 gccgtcgcccgcgtccgctg 686 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,133,782 Number of Sequences: 3902068 Number of extensions: 2133782 Number of successful extensions: 62941 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 58503 Number of HSP's gapped (non-prelim): 4569 length of query: 381 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 359 effective length of database: 17,147,199,772 effective search space: 6155844718148 effective search space used: 6155844718148 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
