ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl07b05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483237.1| Oryza sativa (japonica cultivar-group), mRNA Length = 369 Score = 416 bits (210), Expect = e-113 Identities = 315/350 (90%) Strand = Plus / Plus Query: 53 atggcggacaagaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacacc 112 |||| ||| |||||||| |||||| |||||||||||||||| || || |||||||||||| Sbjct: 1 atggtggagaagaagggaggagcggcgaggaaggaggaggtggtgacgagggagtacacc 60 Query: 113 gtcaacctccacaagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatc 172 |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| Sbjct: 61 atcaacctccacaagcgcctccacagctgtacattcaagaagaaggcgcccaatgccatc 120 Query: 173 aaagagctccggaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtg 232 |||||| || |||||||||| ||||||||||||||||| ||||| |||||| |||| ||| Sbjct: 121 aaagagatcaggaagtttgcgcagaaggctatgggcactacagatgtcagggtcgatgtg 180 Query: 233 aagctcaacaagctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtg 292 ||||||||||||| ||||||||||||||||||||| || ||||| || |||||||| ||| Sbjct: 181 aagctcaacaagcacatctggagcagtgggatcaggagtgtgccgcggagggttcgtgtg 240 Query: 293 aggattgcccgcaggaggaatgacgaggaggacgccaaggaggagctctactcactcgtc 352 ||||| ||||||| |||||||||||||||||| |||||||| ||||||||||| || ||| Sbjct: 241 aggatcgcccgcaagaggaatgacgaggaggatgccaaggaagagctctactctctggtc 300 Query: 353 accgttgccgaggtgcctgctgagggtttgaaggggctgggaaccaaggt 402 || || |||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 301 actgtggccgaggtccctcctgagggtttgaaggggctgggaaccaaggt 350
>gb|AY109515.1| Zea mays CL253_10 mRNA sequence Length = 654 Score = 377 bits (190), Expect = e-101 Identities = 304/342 (88%) Strand = Plus / Minus Query: 64 gaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctcca 123 |||||| |||||| |||||||||||||||| || ||||||||||||||| |||||||||| Sbjct: 574 gaagggaggagcgtcgaggaaggaggaggtggtcaccagggagtacaccatcaacctcca 515 Query: 124 caagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaagagctccg 183 |||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| || | Sbjct: 514 caagcgcctccacggctgcacattcaagaagaaggcacccaacgccatcaaggagatcag 455 Query: 184 gaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaa 243 |||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| Sbjct: 454 gaagtttgcacagaaggccatgggcaccacggacgtcaggatcgatgtgaagctcaacaa 395 Query: 244 gctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccg 303 || |||||||||||| |||||||| |||||||| || |||||||| |||||||| ||||| Sbjct: 394 gcacatctggagcagcgggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccg 335 Query: 304 caggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccga 363 || |||||| || |||||||| ||||||||||| |||||||| || |||||||| || || Sbjct: 334 caagaggaacgatgaggaggatgccaaggaggaactctactcccttgtcaccgtcgcgga 275 Query: 364 ggtgcctgctgagggtttgaaggggctgggaaccaaggtcgt 405 | | ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 274 gatccctgccgagggcttgaaagggctggggaccaaggtcgt 233
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 321 bits (162), Expect = 1e-84 Identities = 237/262 (90%) Strand = Plus / Minus Query: 141 gtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaagg 200 |||| |||||||||||||| |||||||||||||||||| || |||||||||| ||||||| Sbjct: 24986243 gtacattcaagaagaaggcgcccaatgccatcaaagagatcaggaagtttgcgcagaagg 24986184 Query: 201 ctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagtg 260 |||||||||| ||||| |||||| |||| |||||||||||||||| |||||||||||||| Sbjct: 24986183 ctatgggcactacagatgtcagggtcgatgtgaagctcaacaagcacatctggagcagtg 24986124 Query: 261 ggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgagg 320 ||||||| || ||||| || |||||||| |||||||| ||||||| |||||||||||||| Sbjct: 24986123 ggatcaggagtgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaatgacgagg 24986064 Query: 321 aggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgagggtt 380 |||| |||||||| ||||||||||| || ||||| || |||||||| ||| ||||||||| Sbjct: 24986063 aggatgccaaggaagagctctactctctggtcactgtggccgaggtccctcctgagggtt 24986004 Query: 381 tgaaggggctgggaaccaaggt 402 |||||||||||||||||||||| Sbjct: 24986003 tgaaggggctgggaaccaaggt 24985982 Score = 103 bits (52), Expect = 5e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 52 gatggcggacaagaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacac 111 ||||| ||| |||||||| |||||| |||||||||||||||| || || ||||||||||| Sbjct: 24987198 gatggtggagaagaagggaggagcggcgaggaaggaggaggtggtgacgagggagtacac 24987139 Query: 112 cgtcaacctccacaagcgcctcca 135 | |||||||||||||||||||||| Sbjct: 24987138 catcaacctccacaagcgcctcca 24987115 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 101 agggagtacaccgtcaacctccacaagcgcctccatggctg 141 |||||||||||| |||||||||||||||||||||| ||||| Sbjct: 24991896 agggagtacaccatcaacctccacaagcgcctccacggctg 24991856 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 53 atggcggacaagaagggcggagcgccgaggaaggaggaggt 93 |||| ||| |||||||| |||||| ||||||||||||||| Sbjct: 24996110 atggtggataagaagggaggagcggtgaggaaggaggaggt 24996070
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 321 bits (162), Expect = 1e-84 Identities = 237/262 (90%) Strand = Plus / Minus Query: 141 gtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaagg 200 |||| |||||||||||||| |||||||||||||||||| || |||||||||| ||||||| Sbjct: 42359 gtacattcaagaagaaggcgcccaatgccatcaaagagatcaggaagtttgcgcagaagg 42300 Query: 201 ctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagtg 260 |||||||||| ||||| |||||| |||| |||||||||||||||| |||||||||||||| Sbjct: 42299 ctatgggcactacagatgtcagggtcgatgtgaagctcaacaagcacatctggagcagtg 42240 Query: 261 ggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgagg 320 ||||||| || ||||| || |||||||| |||||||| ||||||| |||||||||||||| Sbjct: 42239 ggatcaggagtgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaatgacgagg 42180 Query: 321 aggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgagggtt 380 |||| |||||||| ||||||||||| || ||||| || |||||||| ||| ||||||||| Sbjct: 42179 aggatgccaaggaagagctctactctctggtcactgtggccgaggtccctcctgagggtt 42120 Query: 381 tgaaggggctgggaaccaaggt 402 |||||||||||||||||||||| Sbjct: 42119 tgaaggggctgggaaccaaggt 42098 Score = 103 bits (52), Expect = 5e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 52 gatggcggacaagaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacac 111 ||||| ||| |||||||| |||||| |||||||||||||||| || || ||||||||||| Sbjct: 43314 gatggtggagaagaagggaggagcggcgaggaaggaggaggtggtgacgagggagtacac 43255 Query: 112 cgtcaacctccacaagcgcctcca 135 | |||||||||||||||||||||| Sbjct: 43254 catcaacctccacaagcgcctcca 43231 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 101 agggagtacaccgtcaacctccacaagcgcctccatggctg 141 |||||||||||| |||||||||||||||||||||| ||||| Sbjct: 48012 agggagtacaccatcaacctccacaagcgcctccacggctg 47972 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 53 atggcggacaagaagggcggagcgccgaggaaggaggaggt 93 |||| ||| |||||||| |||||| ||||||||||||||| Sbjct: 52226 atggtggataagaagggaggagcggtgaggaaggaggaggt 52186
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 321 bits (162), Expect = 1e-84 Identities = 237/262 (90%) Strand = Plus / Minus Query: 141 gtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaagg 200 |||| |||||||||||||| |||||||||||||||||| || |||||||||| ||||||| Sbjct: 87958 gtacattcaagaagaaggcgcccaatgccatcaaagagatcaggaagtttgcgcagaagg 87899 Query: 201 ctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagtg 260 |||||||||| ||||| |||||| |||| |||||||||||||||| |||||||||||||| Sbjct: 87898 ctatgggcactacagatgtcagggtcgatgtgaagctcaacaagcacatctggagcagtg 87839 Query: 261 ggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgagg 320 ||||||| || ||||| || |||||||| |||||||| ||||||| |||||||||||||| Sbjct: 87838 ggatcaggagtgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaatgacgagg 87779 Query: 321 aggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgagggtt 380 |||| |||||||| ||||||||||| || ||||| || |||||||| ||| ||||||||| Sbjct: 87778 aggatgccaaggaagagctctactctctggtcactgtggccgaggtccctcctgagggtt 87719 Query: 381 tgaaggggctgggaaccaaggt 402 |||||||||||||||||||||| Sbjct: 87718 tgaaggggctgggaaccaaggt 87697 Score = 103 bits (52), Expect = 5e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 52 gatggcggacaagaagggcggagcgccgaggaaggaggaggtcgtaaccagggagtacac 111 ||||| ||| |||||||| |||||| |||||||||||||||| || || ||||||||||| Sbjct: 88913 gatggtggagaagaagggaggagcggcgaggaaggaggaggtggtgacgagggagtacac 88854 Query: 112 cgtcaacctccacaagcgcctcca 135 | |||||||||||||||||||||| Sbjct: 88853 catcaacctccacaagcgcctcca 88830 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 101 agggagtacaccgtcaacctccacaagcgcctccatggctg 141 |||||||||||| |||||||||||||||||||||| ||||| Sbjct: 93611 agggagtacaccatcaacctccacaagcgcctccacggctg 93571 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 53 atggcggacaagaagggcggagcgccgaggaaggaggaggt 93 |||| ||| |||||||| |||||| ||||||||||||||| Sbjct: 97825 atggtggataagaagggaggagcggtgaggaaggaggaggt 97785
>gb|AY754699.1| Zea mays putative 60S ribosomal protein L31 mRNA, complete cds Length = 595 Score = 297 bits (150), Expect = 2e-77 Identities = 282/326 (86%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 |||||||| ||||| || ||| | ||||||||| ||||||| |||||||||||||| || Sbjct: 43 aggaaggacgaggtggttacccgcgagtacaccatcaacctacacaagcgcctccacgga 102 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaag 199 || |||||||||||||| || |||||||| || || ||| || |||||||||| |||||| Sbjct: 103 tgcaccttcaagaagaaagcccccaatgctataaaggagatcaggaagtttgcgcagaag 162 Query: 200 gctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagt 259 || |||||||| |||||| | |||||||| |||||||||||||||| |||||||||||| Sbjct: 163 gccatgggcaccacagacattaggatcgatgtgaagctcaacaagcacatctggagcagc 222 Query: 260 gggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgag 319 |||||||| |||||||| || |||||||| |||||||| ||||||| |||||| |||||| Sbjct: 223 gggatcaggagcgtgccgcggagggttcgtgtgaggatcgcccgcaagaggaacgacgag 282 Query: 320 gaggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgagggt 379 ||||| |||||||||||||||||||| || |||||||| || ||| | || || ||||| Sbjct: 283 gaggatgccaaggaggagctctactcccttgtcaccgtcgcggagatccccgccgagggc 342 Query: 380 ttgaaggggctgggaaccaaggtcgt 405 ||||| |||||||| ||||||||||| Sbjct: 343 ttgaaagggctggggaccaaggtcgt 368
>dbj|D29722.1|RICYK35 Oryza sativa mRNA, partial homologous to ribosomal protein L31 gene Length = 325 Score = 220 bits (111), Expect = 3e-54 Identities = 165/183 (90%) Strand = Plus / Plus Query: 220 caggatcgacgtgaagctcaacaagctcatctggagcagtgggatcagaagcgtgccccg 279 |||| |||| |||||||||||||||| ||||||||||||||||||||| || ||||| || Sbjct: 1 cagggtcgatgtgaagctcaacaagcacatctggagcagtgggatcaggagtgtgccgcg 60 Query: 280 tagggttcgcgtgaggattgcccgcaggaggaatgacgaggaggacgccaaggaggagct 339 |||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||| Sbjct: 61 aagggttcgtgtgaggatcgcccgcaagaggaatgacgaggaggatgccaaggaagagct 120 Query: 340 ctactcactcgtcaccgttgccgaggtgcctgctgagggtttgaaggggctgggaaccaa 399 |||||| || ||||| || |||||||| ||| |||||||||||||||||||||||||||| Sbjct: 121 ctactctctggtcactgtggccgaggtccctcctgagggtttgaaggggctgggaaccaa 180 Query: 400 ggt 402 ||| Sbjct: 181 ggt 183
>dbj|AK120884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028N24, full insert sequence Length = 811 Score = 220 bits (111), Expect = 3e-54 Identities = 270/323 (83%) Strand = Plus / Plus Query: 78 cgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatg 137 |||||||||| ||||| || ||| | ||||||||| |||||||||||||||||||||| | Sbjct: 123 cgaggaaggacgaggtggtcacccgcgagtacaccatcaacctccacaagcgcctccacg 182 Query: 138 gctgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacaga 197 | || ||||||||||||||||| || ||||||||||| ||| || ||||||||||||||| Sbjct: 183 gatgcaccttcaagaagaaggctcctaatgccatcaaggagatcaggaagtttgcacaga 242 Query: 198 aggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagca 257 |||| |||||||| | |||||||| | || ||||||||| |||||| ||||||||||| Sbjct: 243 aggccatgggcaccattgacgtcagtgttgatgtgaagctcgacaagcacatctggagca 302 Query: 258 gtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacg 317 | || ||| | ||||| || | | || || || || ||||||||||||||||| |||| Sbjct: 303 gcggtatccggagcgttccaaggcgtgtccgtgtcagaattgcccgcaggaggaacgacg 362 Query: 318 aggaggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgagg 377 ||||||| || ||||||||||||||||| || ||||| ||||| ||||| || |||| Sbjct: 363 aggaggatgcgaaggaggagctctactctctggtcactgttgctgaggttccccaagagg 422 Query: 378 gtttgaaggggctgggaaccaag 400 | |||||||| ||||| |||||| Sbjct: 423 ggttgaagggcctgggtaccaag 445
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 178 bits (90), Expect = 1e-41 Identities = 216/258 (83%) Strand = Plus / Plus Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaaggct 202 ||||||||||||||||| || ||||||||||| ||| || ||||||||||||||||||| Sbjct: 12257515 accttcaagaagaaggctcctaatgccatcaaggagatcaggaagtttgcacagaaggcc 12257574 Query: 203 atgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagtggg 262 |||||||| | ||||||||| | || |||||||||||||||| |||||||||||| || Sbjct: 12257575 atgggcaccattgacgtcagggttgatgtgaagctcaacaagcacatctggagcagcggt 12257634 Query: 263 atcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgaggag 322 ||| | ||||| || | | || || || || ||||||||||||||||| ||||||||| Sbjct: 12257635 atccggagcgttccaaggcgtgtccgtgtcagaattgcccgcaggaggaacgacgaggag 12257694 Query: 323 gacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgagggtttg 382 || || ||||||||||||||||| || ||||| ||||| ||||| || ||||| ||| Sbjct: 12257695 gatgcgaaggaggagctctactctctggtcactgttgctgaggttccccaagaggggttg 12257754 Query: 383 aaggggctgggaaccaag 400 ||||| ||||| |||||| Sbjct: 12257755 aagggcctgggtaccaag 12257772 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 78 cgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctcca 135 |||||||||| ||||| || ||| | ||||||||| |||||||||||||||||||||| Sbjct: 12255449 cgaggaaggacgaggtggtcacccgcgagtacaccatcaacctccacaagcgcctcca 12255506
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592B08 Length = 131096 Score = 178 bits (90), Expect = 1e-41 Identities = 216/258 (83%) Strand = Plus / Plus Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaaggct 202 ||||||||||||||||| || ||||||||||| ||| || ||||||||||||||||||| Sbjct: 94537 accttcaagaagaaggctcctaatgccatcaaggagatcaggaagtttgcacagaaggcc 94596 Query: 203 atgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagtggg 262 |||||||| | ||||||||| | || |||||||||||||||| |||||||||||| || Sbjct: 94597 atgggcaccattgacgtcagggttgatgtgaagctcaacaagcacatctggagcagcggt 94656 Query: 263 atcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgaggag 322 ||| | ||||| || | | || || || || ||||||||||||||||| ||||||||| Sbjct: 94657 atccggagcgttccaaggcgtgtccgtgtcagaattgcccgcaggaggaacgacgaggag 94716 Query: 323 gacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgagggtttg 382 || || ||||||||||||||||| || ||||| ||||| ||||| || ||||| ||| Sbjct: 94717 gatgcgaaggaggagctctactctctggtcactgttgctgaggttccccaagaggggttg 94776 Query: 383 aaggggctgggaaccaag 400 ||||| ||||| |||||| Sbjct: 94777 aagggcctgggtaccaag 94794 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 78 cgaggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctcca 135 |||||||||| ||||| || ||| | ||||||||| |||||||||||||||||||||| Sbjct: 92471 cgaggaaggacgaggtggtcacccgcgagtacaccatcaacctccacaagcgcctcca 92528
>gb|AY103830.2| Zea mays PCO109717 mRNA sequence Length = 705 Score = 168 bits (85), Expect = 1e-38 Identities = 232/281 (82%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 |||||||| ||||| || ||| | ||||||||| ||||||| |||||||||||||| || Sbjct: 80 aggaaggacgaggtggttacccgcgagtacaccatcaacctacacaagcgcctccacgga 139 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaag 199 || |||||||||||||| || |||||||| || || || || ||||||||||||||||| Sbjct: 140 tgcaccttcaagaagaaagcccccaatgctataaaggaaatcaggaagtttgcacagaag 199 Query: 200 gctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagt 259 || |||||||| || ||| ||||||| || ||||| |||||||||| ||||||||||||| Sbjct: 200 gcaatgggcaccactgacatcaggattgatgtgaaactcaacaagcacatctggagcagt 259 Query: 260 gggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgag 319 || ||| | || ||||| | | || || || ||||| || |||| |||||| || ||| Sbjct: 260 ggtatccggagtgtgccgaggcgtgtccgtgtcaggatcgcacgcaagaggaacgatgag 319 Query: 320 gaggacgccaaggaggagctctactcactcgtcaccgttgc 360 || ||||||||||| ||||| ||||| || || |||||||| Sbjct: 320 gaagacgccaaggaagagctttactctcttgttaccgttgc 360
>gb|BT017600.1| Zea mays clone EL01N0431G10.c mRNA sequence Length = 533 Score = 161 bits (81), Expect = 3e-36 Identities = 231/281 (82%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 |||||||| ||||| || ||| | ||||||||| ||| |||||||||||||||||| || Sbjct: 29 aggaaggacgaggtggttacccgcgagtacaccatcaccctccacaagcgcctccacgga 88 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaag 199 || ||||||||||||| || |||||||| ||||| || || ||||||||||||||||| Sbjct: 89 tgccccttcaagaagaaagcccccaatgctatcaaggaaatcaggaagtttgcacagaag 148 Query: 200 gctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagt 259 || |||||||| | ||| ||||||| || ||||| |||||||||| ||||||||||||| Sbjct: 149 gcaatgggcacccctgacatcaggattgatgtgaaactcaacaagcacatctggagcagt 208 Query: 260 gggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgag 319 || ||| | || ||||| | | || || || ||||| || |||| |||||| || ||| Sbjct: 209 ggtatccggagtgtgccgaggcgtgtccgtgtcaggatcgcacgcaagaggaacgatgag 268 Query: 320 gaggacgccaaggaggagctctactcactcgtcaccgttgc 360 || ||||||||||| ||||| ||||| || || |||||||| Sbjct: 269 gaagacgccaaggaagagctttactctcttgttaccgttgc 309
>gb|AY109331.1| Zea mays CL253_2 mRNA sequence Length = 2256 Score = 161 bits (81), Expect = 3e-36 Identities = 213/257 (82%) Strand = Plus / Minus Query: 104 gagtacaccgtcaacctccacaagcgcctccatggctgtaccttcaagaagaaggcaccc 163 |||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||| Sbjct: 534 gagtacactatcaacctccacaaacgcctccacggatgcacctttaagaagaaggcacca 475 Query: 164 aatgccatcaaagagctccggaagtttgcacagaaggctatgggcacaacagacgtcagg 223 ||||||||||| ||| || ||||||| || |||||||| ||||| || || || ||| || Sbjct: 474 aatgccatcaaggagatcaggaagttcgctcagaaggccatgggtactactgatgtccgg 415 Query: 224 atcgacgtgaagctcaacaagctcatctggagcagtgggatcagaagcgtgccccgtagg 283 || ||||||||||||||||||| ||||||||||||||| ||| | || ||||| | | Sbjct: 414 attgacgtgaagctcaacaagcacatctggagcagtggtatccgcagtgtgccgaggcgt 355 Query: 284 gttcgcgtgaggattgcccgcaggaggaatgacgaggaggacgccaaggaggagctctac 343 || || || || |||||||||| |||| || ||||| |||||||||||||| |||||| Sbjct: 354 gtccgtgtcagaattgcccgcaaccggaacgatgaggaagacgccaaggaggaactctac 295 Query: 344 tcactcgtcaccgttgc 360 || || ||||| ||||| Sbjct: 294 tctctggtcacagttgc 278
>ref|XM_467485.1| Oryza sativa (japonica cultivar-group), mRNA Length = 372 Score = 143 bits (72), Expect = 6e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctgt 142 ||||| ||||| || ||| | ||||||||| |||||||||||||||| ||||| || || Sbjct: 34 aaggacgaggtggtgacccgcgagtacaccatcaacctccacaagcgtctccacggatgc 93 Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaaggct 202 ||||||||||||||||| || ||||||||||| ||| || ||||||||||||||||||| Sbjct: 94 accttcaagaagaaggcgccgaatgccatcaaggagatcaggaagtttgcacagaaggcc 153 Query: 203 atgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctgga 254 ||||||||||| || | | |||||||||||||| |||||| |||||||| Sbjct: 154 atgggcacaacggatatacgcatcgacgtgaagcttaacaaggccatctgga 205 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 317 gaggaggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgag 376 ||||||||||||||||||||||||||||| || ||||| ||||| ||| | ||||| ||| Sbjct: 268 gaggaggacgccaaggaggagctctactctctggtcacagttgctgagatccctgcagag 327 Query: 377 ggtttgaaggggctgggaaccaaggt 402 ||| | ||||| ||||||||||||| Sbjct: 328 ggtctcaagggtttgggaaccaaggt 353
>ref|NM_127532.2| Arabidopsis thaliana structural constituent of ribosome AT2G19740 mRNA, complete cds Length = 593 Score = 133 bits (67), Expect = 6e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctgt 142 ||||| |||||||| |||||||||||||| |||| ||||||| |||||||||| |||| Sbjct: 82 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 141 Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgca 193 ||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 142 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 192
>gb|AY072459.1| Arabidopsis thaliana 60S ribosomal protein L31 (At2g19740; F6F22.23) mRNA, complete cds Length = 425 Score = 133 bits (67), Expect = 6e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctgt 142 ||||| |||||||| |||||||||||||| |||| ||||||| |||||||||| |||| Sbjct: 22 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 81 Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgca 193 ||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 82 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 132
>gb|AY061893.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA, complete cds Length = 360 Score = 133 bits (67), Expect = 6e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctgt 142 ||||| |||||||| |||||||||||||| |||| ||||||| |||||||||| |||| Sbjct: 22 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 81 Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgca 193 ||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 82 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 132
>gb|AY054616.1| Arabidopsis thaliana 60S ribosomal protein L31 (At2g19740; F6F22.23) mRNA, complete cds Length = 562 Score = 133 bits (67), Expect = 6e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctgt 142 ||||| |||||||| |||||||||||||| |||| ||||||| |||||||||| |||| Sbjct: 80 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 139 Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgca 193 ||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 140 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 190
>gb|AY052313.1| Arabidopsis thaliana At2g19740/F6F22.23 mRNA, complete cds Length = 593 Score = 133 bits (67), Expect = 6e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctgt 142 ||||| |||||||| |||||||||||||| |||| ||||||| |||||||||| |||| Sbjct: 82 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 141 Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgca 193 ||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 142 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 192
>emb|BX821878.1|CNS0A8AF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 525 Score = 133 bits (67), Expect = 6e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctgt 142 ||||| |||||||| |||||||||||||| |||| ||||||| |||||||||| |||| Sbjct: 55 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctgc 114 Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgca 193 ||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 115 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 165
>dbj|AB043976.1| Panax ginseng mRNA for ribosomal protein L31, complete cds Length = 554 Score = 111 bits (56), Expect = 2e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 |||||||| || || || || |||||||| ||| ||||||| ||||||||||| |||||| Sbjct: 95 aggaaggaagaagtggtgacgagggagtataccatcaacctgcacaagcgccttcatggc 154 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaag 199 || ||||||||||||||||| || ||||| || || ||| || |||| |||||||||||| Sbjct: 155 tgcaccttcaagaagaaggctcctaatgctataaaggagatcaggaaatttgcacagaag 214 Query: 200 gctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggag 255 || ||||| |||| ||| ||||| | || || ||||| ||||||| |||||||| Sbjct: 215 gcaatgggaacaaaagatgtcagagtggatgtcaagctaaacaagcaaatctggag 270
>gb|DQ384531.1| Panax ginseng clone PG6L-8 ribosomal protein L31 mRNA, complete cds Length = 548 Score = 105 bits (53), Expect = 1e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 |||||||| ||||| || || || ||||||||| ||||||| |||| |||||| ||||| Sbjct: 83 aggaaggaagaggtggtcactagagagtacaccatcaaccttcacaggcgccttcatgga 142 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaag 199 || || || || ||||| || || |||||||| |||||| || | |||||||| || ||| Sbjct: 143 tgcacatttaaaaagaaagctccaaatgccataaaagagatcagaaagtttgctcaaaag 202 Query: 200 gctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcagt 259 |||||||| || ||||| || ||| |||| | |||||| ||||||| ||||||||| || Sbjct: 203 gctatggggactacagatgttagggtcgatgcgaagctaaacaagcagatctggagccgt 262 Query: 260 gggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaatgacgag 319 |||||| |||| || || | ||||| || || | |||||||| | || ||||| ||| Sbjct: 263 gggatccgaagtgttccaaggagggtgcgtgttcgcattgcccgaaaaagaaatgatgag 322 Query: 320 gaggacgccaaggaggagctctactcact 348 || || || |||||||||||||| ||||| Sbjct: 323 gaagatgcaaaggaggagctctattcact 351
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 103 bits (52), Expect = 5e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaaggct 202 ||||||||||||||||| || ||||||||||| ||| || ||||||||||||||||||| Sbjct: 29814477 accttcaagaagaaggcgccgaatgccatcaaggagatcaggaagtttgcacagaaggcc 29814418 Query: 203 atgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctgga 254 ||||||||||| || | | |||||||||||||| |||||| |||||||| Sbjct: 29814417 atgggcacaacggatatacgcatcgacgtgaagcttaacaaggccatctgga 29814366 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 317 gaggaggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgag 376 ||||||||||||||||||||||||||||| || ||||| ||||| ||| | ||||| ||| Sbjct: 29814303 gaggaggacgccaaggaggagctctactctctggtcacagttgctgagatccctgcagag 29814244 Query: 377 ggtttgaaggggctgggaaccaaggt 402 ||| | ||||| ||||||||||||| Sbjct: 29814243 ggtctcaagggtttgggaaccaaggt 29814218 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctcca 135 ||||| ||||| || ||| | ||||||||| |||||||||||||||| ||||| Sbjct: 29815616 aaggacgaggtggtgacccgcgagtacaccatcaacctccacaagcgtctcca 29815564
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 103 bits (52), Expect = 5e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaaggct 202 ||||||||||||||||| || ||||||||||| ||| || ||||||||||||||||||| Sbjct: 70822 accttcaagaagaaggcgccgaatgccatcaaggagatcaggaagtttgcacagaaggcc 70763 Query: 203 atgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctgga 254 ||||||||||| || | | |||||||||||||| |||||| |||||||| Sbjct: 70762 atgggcacaacggatatacgcatcgacgtgaagcttaacaaggccatctgga 70711 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 317 gaggaggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgag 376 ||||||||||||||||||||||||||||| || ||||| ||||| ||| | ||||| ||| Sbjct: 70648 gaggaggacgccaaggaggagctctactctctggtcacagttgctgagatccctgcagag 70589 Query: 377 ggtttgaaggggctgggaaccaaggt 402 ||| | ||||| ||||||||||||| Sbjct: 70588 ggtctcaagggtttgggaaccaaggt 70563 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctcca 135 ||||| ||||| || ||| | ||||||||| |||||||||||||||| ||||| Sbjct: 71961 aaggacgaggtggtgacccgcgagtacaccatcaacctccacaagcgtctcca 71909
>dbj|AK105284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-E05, full insert sequence Length = 2274 Score = 103 bits (52), Expect = 5e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaaggct 202 ||||||||||||||||| || ||||||||||| ||| || ||||||||||||||||||| Sbjct: 1255 accttcaagaagaaggcgccgaatgccatcaaggagatcaggaagtttgcacagaaggcc 1314 Query: 203 atgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctgga 254 ||||||||||| || | | |||||||||||||| |||||| |||||||| Sbjct: 1315 atgggcacaacggatatacgcatcgacgtgaagcttaacaaggccatctgga 1366 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 317 gaggaggacgccaaggaggagctctactcactcgtcaccgttgccgaggtgcctgctgag 376 ||||||||||||||||||||||||||||| || ||||| ||||| ||| | ||||| ||| Sbjct: 1429 gaggaggacgccaaggaggagctctactctctggtcacagttgctgagatccctgcagag 1488 Query: 377 ggtttgaaggggctgggaaccaaggt 402 ||| | ||||| ||||||||||||| Sbjct: 1489 ggtctcaagggtttgggaaccaaggt 1514 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctcca 135 ||||| ||||| || ||| | ||||||||| |||||||||||||||| ||||| Sbjct: 116 aaggacgaggtggtgacccgcgagtacaccatcaacctccacaagcgtctcca 168
>gb|AF237624.1|AF237624 Perilla frutescens 80S ribosomal protein L31 mRNA, complete cds Length = 535 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 ||||| |||||||| || |||| ||||||||| |||| || ||||| |||||||| || Sbjct: 77 aggaaagaggaggttgtctccagagagtacaccatcaatctgcacaaacgcctccacgga 136 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaag 199 ||||| ||||||||||||||||| || |||||||| || | ||||||||||| |||||| Sbjct: 137 tgtactttcaagaagaaggcaccgaaagccatcaaggaaattcggaagtttgcccagaag 196 Query: 200 gctatgggcac 210 || |||||||| Sbjct: 197 gccatgggcac 207
>gb|U23784.1|NGU23784 Nicotiana glutinosa ribosomal protein L31 mRNA, complete cds Length = 672 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 101 agggagtacaccgtcaacctccacaagcgcctccatggctgtaccttcaagaagaaggca 160 ||||||||||| |||| |||||||||||| | ||| ||||||| || ||||||||||| Sbjct: 119 agggagtacactatcaatctccacaagcgcttacatagctgtacatttaagaagaaggcc 178 Query: 161 cccaatgccatcaaagagctccggaagtttgcacagaaggctatgggcac 210 || | |||||||| ||| ||||||||||||||||||| ||||||||||| Sbjct: 179 ccaacagccatcaaggagatccggaagtttgcacagaaagctatgggcac 228
>gb|BT014565.1| Lycopersicon esculentum clone 134019R, mRNA sequence Length = 643 Score = 97.6 bits (49), Expect = 3e-17 Identities = 142/173 (82%) Strand = Plus / Plus Query: 86 gaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctgtacc 145 |||||||| || |||||||||||||| | || ||||||||||| | ||||| || || Sbjct: 131 gaggaggttgtttccagggagtacaccattaatctccacaagcgtttgcatggatgcaca 190 Query: 146 ttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaaggctatg 205 |||||||||||||| || | |||||||| ||| |||| |||||||||||||| || ||| Sbjct: 191 ttcaagaagaaggccccgacagccatcaaggagatccgaaagtttgcacagaaagccatg 250 Query: 206 ggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagcag 258 || || | || ||||| | ||||||||||||||||||| ||||||||||| Sbjct: 251 ggaacgaaggatgtcagagtggacgtgaagctcaacaagcagatctggagcag 303 Score = 89.7 bits (45), Expect = 8e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 296 attgcccgcaggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcacc 355 ||||| |||| |||||||||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 341 attgctcgcaagaggaatgacgatgaggacgcaaaggaagagctctactctcttgtcact 400 Query: 356 gttgccgaggtgcctgctgagggtttgaaggggctgggaaccaag 400 ||||| ||| | || ||||||||||||||||| || || |||||| Sbjct: 401 gttgcagagatcccagctgagggtttgaagggtcttggtaccaag 445
>gb|AF457941.1| Zea mays clone cho1c.pk002.n14, mRNA sequence Length = 387 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 194 cagaaggctatgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctgg 253 |||||||| ||||| || || || ||| |||| ||||||||||||||||||| ||||||| Sbjct: 6 cagaaggccatgggtactactgatgtccggattgacgtgaagctcaacaagcacatctgg 65 Query: 254 agcagtgggatcagaagcgtgccccgtagggttcgcgtgaggattgcccgcaggaggaat 313 |||||||| ||| | || ||||| | | || || || || |||||||||| |||| Sbjct: 66 agcagtggtatccgcagtgtgccgaggcgtgtccgtgtcagaattgcccgcaaccggaac 125 Query: 314 gacgaggaggacgccaaggaggagctctactcactcgtcac 354 || ||||| |||||||||||||| |||||||| || ||||| Sbjct: 126 gatgaggaagacgccaaggaggaactctactccctggtcac 166
>gb|AF051232.1|AF051232 Picea mariana probable 60S ribosomal protein L31 (Sb42) mRNA, complete cds Length = 864 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 101 agggagtacaccgtcaacctccacaagcgcctccatggctgtaccttcaagaagaaggca 160 |||||||||||| |||| || |||| ||||||||||||||| || || || || | ||| Sbjct: 108 agggagtacaccatcaatcttcacaggcgcctccatggctgcacttttaaaaaaatggct 167 Query: 161 cccaatgccatcaaagagctccggaagtttgcacagaaggctatgggcacaacagacgtc 220 || || ||| | |||||| || |||| ||||| |||||||||||||| || || ||||| Sbjct: 168 ccaaaggccgttaaagagatcaggaaatttgcccagaaggctatgggaaccactgacgtg 227 Query: 221 aggatcgacgtgaagctcaacaagctcatctggagcagtgggatcagaagcgtgccc 277 ||| |||| |||||||| |||||| | | |||||||| || || || ||||||||| Sbjct: 228 aggctcgatgtgaagcttaacaaggccgtatggagcaggggcattaggagcgtgccc 284
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgca 193 ||||||||||||||||||||||||||||| |||||| || ||||||||||| Sbjct: 109327 accttcaagaagaaggcacccaatgccattaaagagatcaggaagtttgca 109277 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 83 aaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| |||||||| |||||||||||||| |||| ||||||| |||||||||| |||| Sbjct: 109797 aaggaagaggtcgtgaccagggagtacactatcaatctccacaggcgcctccatagctg 109739
>emb|BX827089.1|CNS0A3AD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB93ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 515 Score = 77.8 bits (39), Expect = 3e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 ||||| |||||||| || ||||| ||||||||| ||||||| |||| ||||| ||| || Sbjct: 46 aggaaagaggaggtggtgaccagagagtacaccatcaaccttcacagacgccttcatagc 105 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaa 198 |||||||| ||||||||||| || || || ||||| ||| | |||||||||| ||||| Sbjct: 106 tgtacctttaagaagaaggctccaaaggcgatcaaggagataaggaagtttgctcagaa 164
>ref|NM_118756.3| Arabidopsis thaliana structural constituent of ribosome AT4G26230 mRNA, complete cds Length = 671 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 ||||| |||||||| || ||||| ||||||||| ||||||| |||| ||||| ||| || Sbjct: 92 aggaaagaggaggtggtgaccagagagtacaccatcaaccttcacagacgccttcatagc 151 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgc 192 |||||||| ||||||||||| || || || ||||| ||| | |||||||||| Sbjct: 152 tgtacctttaagaagaaggctccaaaggcgatcaaggagataaggaagtttgc 204
>emb|BX829225.1|CNS0A2K3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL82ZG07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 663 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 ||||| |||||||| || ||||| ||||||||| ||||||| |||| ||||| ||| || Sbjct: 84 aggaaagaggaggtggtgaccagagagtacaccatcaaccttcacagacgccttcatagc 143 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgc 192 |||||||| ||||||||||| || || || ||||| ||| | |||||||||| Sbjct: 144 tgtacctttaagaagaaggctccaaaggcgatcaaggagataaggaagtttgc 196
>gb|BT005841.1| Arabidopsis thaliana At4g26230 gene, complete cds Length = 360 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 ||||| |||||||| || ||||| ||||||||| ||||||| |||| ||||| ||| || Sbjct: 19 aggaaagaggaggtggtgaccagagagtacaccatcaaccttcacagacgccttcatagc 78 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgc 192 |||||||| ||||||||||| || || || ||||| ||| | |||||||||| Sbjct: 79 tgtacctttaagaagaaggctccaaaggcgatcaaggagataaggaagtttgc 131
>gb|AY085228.1| Arabidopsis thaliana clone 14013 mRNA, complete sequence Length = 537 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 80 aggaaggaggaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 ||||| |||||||| || ||||| ||||||||| ||||||| |||| ||||| ||| || Sbjct: 91 aggaaagaggaggtggtgaccagagagtacaccatcaaccttcacagacgccttcatagc 150 Query: 140 tgtaccttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgc 192 |||||||| ||||||||||| || || || ||||| ||| | |||||||||| Sbjct: 151 tgtacctttaagaagaaggctccaaaggcgatcaaggagataaggaagtttgc 203
>gb|AY085397.1| Arabidopsis thaliana clone 14992 mRNA, complete sequence Length = 600 Score = 63.9 bits (32), Expect = 5e-07 Identities = 128/160 (80%) Strand = Plus / Plus Query: 98 accagggagtacaccgtcaacctccacaagcgcctccatggctgtaccttcaagaagaag 157 ||||| ||||||||| | |||||||||| ||||| || || ||||| ||||||||| Sbjct: 110 accagagagtacaccattaacctccacagacgccttcacaaatgcacctttaagaagaag 169 Query: 158 gcacccaatgccatcaaagagctccggaagtttgcacagaaggctatgggcacaacagac 217 ||||| || |||||||| || || ||||||| ||| |||| |||||||| || | ||| Sbjct: 170 gcaccgaaagccatcaaggaaatcaggaagttcgcagagaaagctatggggactaaggac 229 Query: 218 gtcaggatcgacgtgaagctcaacaagctcatctggagca 257 || ||||| |||||||| | ||||||| |||||||||| Sbjct: 230 gttaggatagacgtgaaattgaacaagcaaatctggagca 269
>gb|DQ306814.1| Hevea brasiliensis isolate SSH85 mRNA sequence Length = 449 Score = 63.9 bits (32), Expect = 5e-07 Identities = 224/288 (77%) Strand = Plus / Plus Query: 116 aacctccacaagcgcctccatggctgtaccttcaagaagaaggcacccaatgccatcaaa 175 |||||||| || ||| | ||||| || || |||||||||||||| ||||| ||||| || Sbjct: 9 aacctccataaacgcttgcatggatgcactttcaagaagaaggctcccaaggccataaag 68 Query: 176 gagctccggaagtttgcacagaaggctatgggcacaacagacgtcaggatcgacgtgaag 235 || || | |||||||| |||||||| ||||| ||||| || || || | || || ||| Sbjct: 69 gaaatcagaaagtttgctcagaaggccatggggacaactgatgttagagtggatgtcaag 128 Query: 236 ctcaacaagctcatctggagcagtgggatcagaagcgtgccccgtagggttcgcgtgagg 295 || ||||||| || |||||| |||| ||||| |||||||| | || ||||| || | Sbjct: 129 ctaaacaagcatatatggagccgtggaatcaggagcgtgccaaggagagttcgtgttcgc 188 Query: 296 attgcccgcaggaggaatgacgaggaggacgccaaggaggagctctactcactcgtcacc 355 ||||| || | ||| ||||| || ||||| || ||||||||| | || ||||| ||||| Sbjct: 189 attgcacggaagagaaatgatgaagaggatgcaaaggaggagttttattcacttgtcact 248 Query: 356 gttgccgaggtgcctgctgagggtttgaaggggctgggaaccaaggtc 403 ||| | ||||| ||| | ||||| || ||||| |||| ||||||||| Sbjct: 249 gttacagaggttccttcagagggattcaagggtttgggcaccaaggtc 296
>emb|AJ417520.1|OSA417520 Oryza sativa partial mRNA for ribosomal protein L31 (xd5 gene) Length = 325 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 332 gaggagctctactcactcgtcaccgttgccgaggtgcctgctgagggtttgaaggggctg 391 |||||||||||||| || ||||| ||||| ||||| ||||| |||||| | ||||| || Sbjct: 1 gaggagctctactctctggtcacagttgctgaggtccctgcagagggtctcaagggtttg 60 Query: 392 ggaaccaaggt 402 ||||||||||| Sbjct: 61 ggaaccaaggt 71
>gb|AY832444.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_412m2 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832443.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_412m1 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 607 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832442.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_013d2 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 606 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832441.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_013d1 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832440.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_24 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 606 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832439.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_23 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 607 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832438.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_22 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 606 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832437.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_21 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832436.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_20 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832435.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_19 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 607 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832434.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_18 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 607 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832433.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_17 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 606 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832432.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_16 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832431.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_15 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832430.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_14 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832429.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_13 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 606 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832428.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_12 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832427.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_11 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832426.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_10 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 607 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832425.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_9 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 606 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832424.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_8 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832423.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_7 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832422.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_6 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832421.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_5 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 606 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832420.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_4 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832419.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_3 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832418.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_2 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 607 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>gb|AY832417.1| Pseudotsuga menziesii var. menziesii haplotype Pm-60SRPL31a_1 60S ribosomal protein L31a (60SRPL31a) gene, exons 1, 2 and partial cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggctg 141 ||||| || ||||||||||||||| |||| || ||||||||||| |||||||| Sbjct: 11 gaggttgttaccagggagtacaccatcaatcttcacaagcgcctacatggctg 63
>ref|NM_125054.1| Arabidopsis thaliana structural constituent of ribosome AT5G56710 mRNA, complete cds Length = 600 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Plus Query: 98 accagggagtacaccgtcaacctccacaagcgcctccatggctgtaccttcaagaagaag 157 ||||| ||||||||| | |||||||||| ||||| || || ||||| ||||||||| Sbjct: 110 accagagagtacaccattaacctccacagacgccttcacaaatgcacctttaagaagaag 169 Query: 158 gcacccaatgccatcaaagagctccggaagtttgcacagaaggctatgggcacaacagac 217 ||||| || |||||||| || || ||||||| ||| |||| |||||||| || | ||| Sbjct: 170 gcaccgaaagccatcaaggaaatcaggaagttcgcagagaaagctatggggactaaggac 229 Query: 218 gtcaggatcgacgtgaagctcaacaagctcatctggagca 257 || ||| | |||||||| | ||||||| |||||||||| Sbjct: 230 gttagggtagacgtgaaattgaacaagcaaatctggagca 269
>gb|AY124821.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA, complete cds Length = 360 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Plus Query: 98 accagggagtacaccgtcaacctccacaagcgcctccatggctgtaccttcaagaagaag 157 ||||| ||||||||| | |||||||||| ||||| || || ||||| ||||||||| Sbjct: 37 accagagagtacaccattaacctccacagacgccttcacaaatgcacctttaagaagaag 96 Query: 158 gcacccaatgccatcaaagagctccggaagtttgcacagaaggctatgggcacaacagac 217 ||||| || |||||||| || || ||||||| ||| |||| |||||||| || | ||| Sbjct: 97 gcaccgaaagccatcaaggaaatcaggaagttcgcagagaaagctatggggactaaggac 156 Query: 218 gtcaggatcgacgtgaagctcaacaagctcatctggagca 257 || ||| | |||||||| | ||||||| |||||||||| Sbjct: 157 gttagggtagacgtgaaattgaacaagcaaatctggagca 196
>gb|DQ122871.1| Chlamydomonas incerta 60S ribosomal protein L31 mRNA, complete cds Length = 419 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 314 gacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccgagg 365 ||||| |||||||||||||||||| | ||||| |||| ||||||||||||| Sbjct: 271 gacgacgaggacgccaaggaggagatgtactcgttcgtgaccgttgccgagg 322
>gb|AY050393.1| Arabidopsis thaliana AT5g56710/MIK19_16 mRNA, complete cds Length = 569 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Plus Query: 98 accagggagtacaccgtcaacctccacaagcgcctccatggctgtaccttcaagaagaag 157 ||||| ||||||||| | |||||||||| ||||| || || ||||| ||||||||| Sbjct: 104 accagagagtacaccattaacctccacagacgccttcacaaatgcacctttaagaagaag 163 Query: 158 gcacccaatgccatcaaagagctccggaagtttgcacagaaggctatgggcacaacagac 217 ||||| || |||||||| || || ||||||| ||| |||| |||||||| || | ||| Sbjct: 164 gcaccgaaagccatcaaggaaatcaggaagttcgcagagaaagctatggggactaaggac 223 Query: 218 gtcaggatcgacgtgaagctcaacaagctcatctggagca 257 || ||| | |||||||| | ||||||| |||||||||| Sbjct: 224 gttagggtagacgtgaaattgaacaagcaaatctggagca 263
>emb|X66413.1|CRRIBPL31 C.reinhardtii mRNA for ribosomal protein L31 Length = 383 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 314 gacgaggaggacgccaaggaggagctctactcactcgtcaccgttgccgagg 365 ||||| |||||||||||||||||| | ||||| |||| ||||||||||||| Sbjct: 273 gacgacgaggacgccaaggaggagatgtactcgttcgtgaccgttgccgagg 324
>gb|AF401586.1| Ictalurus punctatus ribosomal protein L31 mRNA, complete cds Length = 417 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatggc 139 ||||| |||||| ||||||| ||| ||||| ||||||||||| |||||||| Sbjct: 55 gaggtggtaacccgggagtataccatcaacgtccacaagcgcatccatggc 105
>dbj|AB013392.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIK19 Length = 84129 Score = 54.0 bits (27), Expect = 5e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 143 accttcaagaagaaggcacccaatgccatcaaagagctccggaagtttgcacagaaggct 202 ||||| |||||||||||||| || |||||||| || || ||||||| ||| |||| ||| Sbjct: 42486 acctttaagaagaaggcaccgaaagccatcaaggaaatcaggaagttcgcagagaaagct 42427 Query: 203 atgggcacaacagacgtcaggatcgacgtgaagctcaacaagctcatctggagca 257 ||||| || | ||||| ||| | |||||||| | ||||||| |||||||||| Sbjct: 42426 atggggactaaggacgttagggtagacgtgaaattgaacaagcaaatctggagca 42372
>gb|AY190731.1| Pagrus major ribosomal protein L31 mRNA, complete cds Length = 447 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 98 accagggagtacaccgtcaacctccacaagcgcctccatggc 139 ||||| ||||||||| ||||| ||||||||||| |||||||| Sbjct: 79 accagagagtacaccatcaacatccacaagcgcatccatggc 120
>ref|XM_416909.1| PREDICTED: Gallus gallus similar to ribosomal protein L31 (LOC418710), mRNA Length = 1022 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatgg 138 ||||| || ||||||||||||||| ||||| |||||||||| ||||||| Sbjct: 196 gaggtggtgaccagggagtacaccatcaacatccacaagcggatccatgg 245
>emb|AJ628167.1| Oikopleura dioica partial mRNA for ribosomal protein L31 (RPL31 gene) Length = 347 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 104 gagtacaccgtcaacctccacaagcg 129 |||||||||||||||||||||||||| Sbjct: 117 gagtacaccgtcaacctccacaagcg 142
>emb|CR387290.1| Gallus gallus finished cDNA, clone ChEST178p13 Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 89 gaggtcgtaaccagggagtacaccgtcaacctccacaagcgcctccatgg 138 ||||| || ||||||||||||||| ||||| |||||||||| ||||||| Sbjct: 77 gaggtggtgaccagggagtacaccatcaacatccacaagcggatccatgg 126
>ref|XM_381680.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG01504.1) partial mRNA Length = 372 Score = 48.1 bits (24), Expect = 0.028 Identities = 62/72 (86%), Gaps = 2/72 (2%) Strand = Plus / Plus Query: 104 gagtacaccgtcaacctccacaagcgcctccatggctgt-accttcaagaagaaggcacc 162 ||||||||| || || | |||||||| |||||||| ||| ||||||||||||| ||| || Sbjct: 67 gagtacaccatccacatgcacaagcgactccatgg-tgtcaccttcaagaagagggctcc 125 Query: 163 caatgccatcaa 174 ||| |||||||| Sbjct: 126 caaggccatcaa 137
>dbj|AB226042.1| Aspergillus oryzae cDNA, contig sequence: AoEST2898 Length = 630 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 314 gacgaggaggacgccaaggaggagctctactc 345 ||||||||| ||||||||||| |||||||||| Sbjct: 341 gacgaggagaacgccaaggagaagctctactc 372
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 314 gacgaggaggacgccaaggaggagctctactc 345 ||||||||| ||||||||||| |||||||||| Sbjct: 1198108 gacgaggagaacgccaaggagaagctctactc 1198139
>dbj|AK107805.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-E07, full insert sequence Length = 699 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 104 gagtacaccgtcaacctccacaagcgcctcca 135 ||||||||||||||||| ||||||||| |||| Sbjct: 87 gagtacaccgtcaacctgcacaagcgcgtcca 118
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 92 gtcgtaaccagggagtacaccgtcaacctccacaagcg 129 ||||| ||||||||||||||| || | ||||||||||| Sbjct: 1863402 gtcgtcaccagggagtacaccatccatctccacaagcg 1863365
>ref|XM_566913.1| Cryptococcus neoformans var. neoformans JEC21 PRCDNA87 (CNA06820) partial mRNA Length = 459 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 92 gtcgtaaccagggagtacaccgtcaacctccacaagcg 129 ||||| ||||||||||||||| || | ||||||||||| Sbjct: 55 gtcgtcaccagggagtacaccatccatctccacaagcg 92 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 144 ccttcaagaagaaggcacccaatgccat 171 |||||||||||||||| ||||| ||||| Sbjct: 107 ccttcaagaagaaggcccccaaggccat 134
>emb|CR394537.12| Zebrafish DNA sequence from clone CH211-119D19 in linkage group 16, complete sequence Length = 168543 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 gaggagaagaggggatggcggacaag 64 |||||||||||||||||| ||||||| Sbjct: 89320 gaggagaagaggggatgggggacaag 89345
>emb|CR718548.2|CNS0GHDM Tetraodon nigroviridis full-length cDNA Length = 439 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 101 agggagtacaccgtcaacctccacaagcgcctccatgg 138 |||||||||||| |||| ||||||||||| ||||||| Sbjct: 87 agggagtacaccatcaatatccacaagcgcatccatgg 124
>emb|BX470243.12| Zebrafish DNA sequence from clone CH211-79J19 in linkage group 16, complete sequence Length = 191645 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 gaggagaagaggggatggcggacaag 64 |||||||||||||||||| ||||||| Sbjct: 24169 gaggagaagaggggatgggggacaag 24194
>emb|AJ005204.1|CPAJ5204 Cyanophora paradoxa mRNA for ribosomal protein L31 Length = 540 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 gggagtacaccgtcaacctccacaagcgcctccatggc 139 |||||||||| ||||||| ||||||||||| |||||| Sbjct: 65 gggagtacacgatcaacctgcacaagcgcctgcatggc 102
>gb|AC147381.3| Pan troglodytes BAC clone RP43-162H15 from 7, complete sequence Length = 162222 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 82447 cctgctgagggtttgaagggg 82467
>gb|AC147070.5| Homo sapiens chromosome 4 clone RP13-1008F15, complete sequence Length = 153296 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 131729 cctgctgagggtttgaagggg 131749
>gb|AY226087.1| Leucosolenia sp. 90-kDa heat-shock protein (hsp90) mRNA, partial cds Length = 1716 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 312 atgacgaggaggacgccaaggagga 336 ||||||| ||||||||||||||||| Sbjct: 626 atgacgaagaggacgccaaggagga 650
>gb|AC147055.2| Homo sapiens BAC clone RP11-1267H10 from 4, complete sequence Length = 184963 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 35527 cctgctgagggtttgaagggg 35507
>gb|AC073127.11| Homo sapiens BAC clone RP11-645N11 from 7, complete sequence Length = 155842 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 51067 cctgctgagggtttgaagggg 51047
>gb|U58751.1| Caenorhabditis elegans cosmid C07G1, complete sequence Length = 44298 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 acgtgaagctcaacaagctcatctg 252 |||| |||||||||||||||||||| Sbjct: 22981 acgtcaagctcaacaagctcatctg 22957
>gb|AC026477.3| Homo sapiens chromosome 5 clone RP11-94D20, complete sequence Length = 70380 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 54074 cctgctgagggtttgaagggg 54094
>gb|AC100812.2| Homo sapiens chromosome 8, clone CTD-2532N20, complete sequence Length = 209123 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 101443 cctgctgagggtttgaagggg 101423
>gb|AC104335.2| Homo sapiens chromosome 1 clone RP11-433K2, complete sequence Length = 212426 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 56084 cctgctgagggtttgaagggg 56064
>gb|AC096768.3| Homo sapiens BAC clone RP11-722P15 from 4, complete sequence Length = 180430 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 126563 cctgctgagggtttgaagggg 126583
>emb|BX005153.13| Zebrafish DNA sequence from clone CH211-281G2 in linkage group 24, complete sequence Length = 177146 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 426 tttctttatctacattgttag 446 ||||||||||||||||||||| Sbjct: 5349 tttctttatctacattgttag 5369
>ref|NM_171394.2| Caenorhabditis elegans WASP (actin cytoskeleton modulator) homolog family member (wsp-1) (wsp-1) mRNA, complete cds Length = 2346 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 acgtgaagctcaacaagctcatctg 252 |||| |||||||||||||||||||| Sbjct: 391 acgtcaagctcaacaagctcatctg 415
>gb|AC134921.2| Homo sapiens BAC clone RP11-597F18 from 4, complete sequence Length = 96776 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 43529 cctgctgagggtttgaagggg 43509
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ggaggaagccgcagcagcagg 29 ||||||||||||||||||||| Sbjct: 6931 ggaggaagccgcagcagcagg 6951
>dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, section 92/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 79964 cctgctgagggtttgaagggg 79984
>gb|DQ138937.1| Drosophila erecta voucher stock #14021-0224.0 CG12105 gene, partial cds Length = 4194 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 atgacgaggaggacgccaagg 332 ||||||||||||||||||||| Sbjct: 3926 atgacgaggaggacgccaagg 3946
>emb|AL133371.3|CNS01DUW Human chromosome 14 DNA sequence BAC R-219E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162472 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 87243 cctgctgagggtttgaagggg 87263
>gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, complete sequence Length = 177416 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 69803 cctgctgagggtttgaagggg 69783
>dbj|AP001629.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1405B7, MX1-D21S171 region, complete sequence Length = 89436 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cctgctgagggtttgaagggg 388 ||||||||||||||||||||| Sbjct: 74103 cctgctgagggtttgaagggg 74123
>ref|NM_129098.1| Arabidopsis thaliana unknown protein AT2G35460 mRNA, complete cds Length = 717 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 caggatcgacgtgaagctca 239 |||||||||||||||||||| Sbjct: 552 caggatcgacgtgaagctca 571
>gb|AY827550.1| Ovis aries brain glycogen phosphorylase (PYGB) mRNA, complete cds Length = 3801 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 gacgaggaggacgccaaggaggag 337 ||||||||||||| |||||||||| Sbjct: 69 gacgaggaggacgacaaggaggag 46
>ref|NM_010948.1| Mus musculus nuclear distribution gene C homolog (Aspergillus) (Nudc), mRNA Length = 1302 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 212 ggaggagaagaggggatggc 231
>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence Length = 210548 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 aagaggggatggcggacaagaagg 68 |||||||||||| ||||||||||| Sbjct: 206327 aagaggggatggtggacaagaagg 206304
>ref|XM_753373.1| Ustilago maydis 521 hypothetical protein (UM02319.1) partial mRNA Length = 2979 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ggaggaagccgcagcagcag 28 |||||||||||||||||||| Sbjct: 243 ggaggaagccgcagcagcag 224
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tgaagctcaacaagctcatc 250 |||||||||||||||||||| Sbjct: 59329 tgaagctcaacaagctcatc 59310
>gb|AC121925.2| Mus musculus BAC clone RP24-201D17 from 6, complete sequence Length = 180015 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gagggaggagaagaggggat 54 |||||||||||||||||||| Sbjct: 146761 gagggaggagaagaggggat 146742
>ref|XM_544475.2| PREDICTED: Canis familiaris similar to nuclear distribution gene C homolog (A. nidulans), transcript variant 1 (LOC487349), mRNA Length = 1332 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 248 ggaggagaagaggggatggc 267
>ref|XM_501163.1| Yarrowia lipolytica CLIB122, YALI0B21032g predicted mRNA Length = 1407 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 aggaggacgccaaggaggag 337 |||||||||||||||||||| Sbjct: 896 aggaggacgccaaggaggag 915
>ref|XM_504354.1| Yarrowia lipolytica CLIB122, YALI0E24475g predicted mRNA Length = 351 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 314 gacgaggaggacgccaaggaggagctct 341 ||||||||| ||||||||||| |||||| Sbjct: 247 gacgaggagaacgccaaggagaagctct 274
>emb|AL137782.9| Human DNA sequence from clone RP11-29G8 on chromosome 13q22.1-31.1 Contains part of the LMO7 gene for LIM domain only 7 (KIAA0858) and a novel pseudogene (FLJ13188, FLJ22977), complete sequence Length = 139252 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 gcagcagcaggtcagcgagggagg 42 ||||||||||||||| |||||||| Sbjct: 76489 gcagcagcaggtcagggagggagg 76466
>emb|Y15522.1|MMNUDC Mus musculus mRNA for MNUDC protein Length = 1005 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 136 ggaggagaagaggggatggc 155
>emb|X82445.1|RNRNUDC R.norvegicus C15 mRNA Length = 1294 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 220 ggaggagaagaggggatggc 239
>emb|X81443.1|MMSIG92 M.musculus SIG-92 mRNA Length = 1302 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 212 ggaggagaagaggggatggc 231
>gb|BC065581.1| Rattus norvegicus nuclear distribution gene C homolog (Aspergillus), mRNA (cDNA clone MGC:72493 IMAGE:5623848), complete cds Length = 1370 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 206 ggaggagaagaggggatggc 225
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gccgcagcagcaggtcagcg 35 |||||||||||||||||||| Sbjct: 1867024 gccgcagcagcaggtcagcg 1867043
>gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F12 map ve016, complete sequence Length = 79881 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 caggatcgacgtgaagctca 239 |||||||||||||||||||| Sbjct: 42503 caggatcgacgtgaagctca 42484
>dbj|AK146323.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730052K04 product:nuclear distribution gene C homolog (Aspergillus), full insert sequence Length = 1306 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 245 ggaggagaagaggggatggc 264
>gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, complete sequence Length = 112659 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cctgctgagggtttgaaggg 387 |||||||||||||||||||| Sbjct: 52862 cctgctgagggtttgaaggg 52843
>ref|XM_692105.1| PREDICTED: Danio rerio similar to nuclear localized factor 2 (LOC568754), mRNA Length = 1578 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 acaccgtcaacctccacaag 127 |||||||||||||||||||| Sbjct: 1208 acaccgtcaacctccacaag 1227
>gb|AC154881.6| Mus musculus chromosome 15, clone RP24-259H19, complete sequence Length = 180231 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 aagaggggatggcggacaagaagg 68 |||||||||||| ||||||||||| Sbjct: 144827 aagaggggatggtggacaagaagg 144850
>dbj|AK032673.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530413H12 product:nuclear distribution gene C homolog (Aspergillus), full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 232 ggaggagaagaggggatggc 251
>ref|NM_001024863.1| Ovis aries brain glycogen phosphorylase (PYGB), mRNA Length = 3801 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 gacgaggaggacgccaaggaggag 337 ||||||||||||| |||||||||| Sbjct: 69 gacgaggaggacgacaaggaggag 46
>dbj|AK012777.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810021G05 product:nuclear distribution gene C homolog (Aspergillus), full insert sequence Length = 1292 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 224 ggaggagaagaggggatggc 243
>dbj|AK087500.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130306O22 product:ZAP3 protein, full insert sequence Length = 3115 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ggagggaggaagccgcagcagcag 28 |||||||||| ||||||||||||| Sbjct: 3032 ggagggaggaggccgcagcagcag 3055
>dbj|AK012321.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700033I24 product:nuclear distribution gene C homolog (Aspergillus), full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 245 ggaggagaagaggggatggc 264
>gb|AC016405.8|AC016405 Homo sapiens, clone RP11-44N11, complete sequence Length = 159153 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ctgctgagggtttgaagggg 388 |||||||||||||||||||| Sbjct: 61012 ctgctgagggtttgaagggg 60993
>dbj|AK048294.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130047B11 product:unclassifiable, full insert sequence Length = 1682 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aatgagctgttattttgcat 466 |||||||||||||||||||| Sbjct: 659 aatgagctgttattttgcat 678
>ref|NM_017271.1| Rattus norvegicus nuclear distribution gene C homolog (Aspergillus) (Nudc), mRNA Length = 1294 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 220 ggaggagaagaggggatggc 239
>emb|AL672306.11| Mouse DNA sequence from clone RP23-149O3 on chromosome X, complete sequence Length = 211871 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 acagaaggctatgggcacaa 212 |||||||||||||||||||| Sbjct: 36372 acagaaggctatgggcacaa 36353
>emb|BX548157.5| Zebrafish DNA sequence from clone CH211-201B11 in linkage group 18, complete sequence Length = 195621 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aagctcaacaagctcatctg 252 |||||||||||||||||||| Sbjct: 59412 aagctcaacaagctcatctg 59431
>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete sequence Length = 231197 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggcacccaatgccatcaaag 176 |||||||||||||||||||| Sbjct: 165225 ggcacccaatgccatcaaag 165244
>emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chromosome 2, complete sequence Length = 178735 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aatgagctgttattttgcat 466 |||||||||||||||||||| Sbjct: 17630 aatgagctgttattttgcat 17611
>gb|AY610051.1| Sus scrofa clone Clu_60320.scr.msk.p1.Contig1, mRNA sequence Length = 1345 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 239 ggaggagaagaggggatggc 258
>gb|BC011253.1| Mus musculus nuclear distribution gene C homolog (Aspergillus), mRNA (cDNA clone MGC:19328 IMAGE:4207838), complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 210 ggaggagaagaggggatggc 229
>emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on chromosome 4, complete sequence Length = 193813 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ggaggagaagaggggatggc 57 |||||||||||||||||||| Sbjct: 117080 ggaggagaagaggggatggc 117061
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 314 gacgaggaggacgccaaggaggagctct 341 ||||||||| ||||||||||| |||||| Sbjct: 2917310 gacgaggagaacgccaaggagaagctct 2917337
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 aggaggacgccaaggaggag 337 |||||||||||||||||||| Sbjct: 2766012 aggaggacgccaaggaggag 2765993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,529,127 Number of Sequences: 3902068 Number of extensions: 4529127 Number of successful extensions: 89961 Number of sequences better than 10.0: 145 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89448 Number of HSP's gapped (non-prelim): 507 length of query: 504 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 482 effective length of database: 17,147,199,772 effective search space: 8264950290104 effective search space used: 8264950290104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
