>IPO11_HUMAN (Q9UI26) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)|
          Length = 975

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 24/66 (36%), Positives = 31/66 (46%)
 Frame = +3

Query: 237 SMSLDVTQILLSAQSADGSIRKHAEESLKQFQEXNLPGFXXXXXXXXANNEKPEESRRLA 416
           S S  V Q+L  A S D ++ K AEE LKQ++    PGF         N+      R LA
Sbjct: 5   SASTVVLQVLTQATSQDTAVLKPAEEQLKQWE--TQPGFYSVLLNIFTNHTLDINVRWLA 62

Query: 417 GLILKN 434
            L  K+
Sbjct: 63  VLYFKH 68

>IPO11_MOUSE (Q8K2V6) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)|
          Length = 975

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 24/66 (36%), Positives = 31/66 (46%)
 Frame = +3

Query: 237 SMSLDVTQILLSAQSADGSIRKHAEESLKQFQEXNLPGFXXXXXXXXANNEKPEESRRLA 416
           S S  V Q+L  A S D ++ K AEE LKQ++    PGF         N+      R LA
Sbjct: 5   SASSVVLQVLTQATSQDTAVLKPAEEQLKQWE--TQPGFYSVLLNIFTNHTLDINVRWLA 62

Query: 417 GLILKN 434
            L  K+
Sbjct: 63  VLYFKH 68

>TNPO1_MOUSE (Q8BFY9) Transportin-1 (Importin beta-2) (Karyopherin beta-2)|
          Length = 890

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +3

Query: 252 VTQILLSAQSADGSIRKHAEESLKQFQEXNLPGFXXXXXXXXANNEKPEE-SRRLAGLIL 428
           + Q+L  +QS D +I++  ++ L+Q  +   P F           +  +E +R L+GLIL
Sbjct: 15  ILQLLKESQSPDTTIQRTVQQKLEQLNQY--PDFNNYLIFVLTKLKSEDEPTRSLSGLIL 72

Query: 429 KN 434
           KN
Sbjct: 73  KN 74

>TNPO1_HUMAN (Q92973) Transportin-1 (Importin beta-2) (Karyopherin beta-2) (M9|
           region interaction protein) (MIP)
          Length = 890

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +3

Query: 252 VTQILLSAQSADGSIRKHAEESLKQFQEXNLPGFXXXXXXXXANNEKPEE-SRRLAGLIL 428
           + Q+L  +QS D +I++  ++ L+Q  +   P F           +  +E +R L+GLIL
Sbjct: 15  ILQLLKESQSPDTTIQRTVQQKLEQLNQY--PDFNNYLIFVLTKLKSEDEPTRSLSGLIL 72

Query: 429 KN 434
           KN
Sbjct: 73  KN 74

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 97   APSL-NRRATASAPSRDLGRLKLRRAVQLRHTRRRQ 201
            AP+L + RA A AP+R L  L+LRRA + R  +RR+
Sbjct: 2257 APALAHARARARAPARLLPELRLRRARRPRPRQRRR 2292

>TNPO2_HUMAN (O14787) Transportin-2 (Karyopherin beta-2b)|
          Length = 897

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 252 VTQILLSAQSADGSIRKHAEESLKQFQEXNLPGFXXXXXXXXANNEKPEE-SRRLAGLIL 428
           V Q+L  +QS + + ++  ++ LKQ  +   P F           +  +E +R L+GLIL
Sbjct: 13  VLQLLKDSQSPNTATQRIVQDKLKQLNQ--FPDFNNYLIFVLTRLKSEDEPTRSLSGLIL 70

Query: 429 KN 434
           KN
Sbjct: 71  KN 72

>TNPO2_MOUSE (Q99LG2) Transportin-2 (Karyopherin beta-2b)|
          Length = 887

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 252 VTQILLSAQSADGSIRKHAEESLKQFQEXNLPGFXXXXXXXXANNEKPEE-SRRLAGLIL 428
           V Q+L  +QS + + ++  ++ LKQ  +   P F           +  +E +R L+GLIL
Sbjct: 13  VLQLLKDSQSPNTATQRIVQDKLKQLNQ--FPDFNNYLIFVLTRLKSEDEPTRSLSGLIL 70

Query: 429 KN 434
           KN
Sbjct: 71  KN 72

>IMB1_SCHPO (O13864) Importin beta-1 subunit (Karyopherin beta-1 subunit)|
           (Importin 95)
          Length = 863

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +3

Query: 246 LDVTQILLSAQSADGSIRKHAEESLKQFQEXNLPGFXXXXXXXXANNEKPEESRRLAGLI 425
           ++  + L    S D ++R +AE+ L+     +   +        AN+      R  AGL 
Sbjct: 1   MNAGEFLAQTLSPDANVRLNAEKQLENAARTDFAQYMVLLAQELANDNSMPYIRMAAGLA 60

Query: 426 LKN 434
           LKN
Sbjct: 61  LKN 63

>IMB_DROME (O18388) Importin beta subunit (Karyopherin beta-4 subunit)|
           (Protein ketel)
          Length = 884

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 19/65 (29%), Positives = 27/65 (41%)
 Frame = +3

Query: 240 MSLDVTQILLSAQSADGSIRKHAEESLKQFQEXNLPGFXXXXXXXXANNEKPEESRRLAG 419
           +++ +  IL    S D +    A+  L+Q    NLP F         N      +R  AG
Sbjct: 5   IAMQLIAILEKTVSPDKNELLSAKNFLEQAAASNLPEFLKALSEILVNTANSAVARMAAG 64

Query: 420 LILKN 434
           L LKN
Sbjct: 65  LQLKN 69

>CBIO_PROFR (Q51719) Cobalt import ATP-binding protein cbiO|
          Length = 297

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = -3

Query: 225 LAAEMGR*LATTGVTELDGATELQTSKVAGWSRGGSSAIERRGEPCDWAARELRD 61
           LA   G  LA  G       T L  S +AG  +    A+ER G P DW  + LR+
Sbjct: 26  LAIGRGTRLALLGANGSGKTTLL--SCLAGSLKPTGGAVERDGAPIDWGRKGLRE 78


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,687,296
Number of Sequences: 219361
Number of extensions: 602888
Number of successful extensions: 1654
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)