>PARP4_HUMAN (Q9UKK3) Poly [ADP-ribose] polymerase 4 (EC 2.4.2.30) (PARP-4) (Vault|
            poly(ADP-ribose) polymerase) (VPARP) (193-kDa vault
            protein) (PARP-related/IalphaI-related H5/proline-rich)
            (PH5P)
          Length = 1724

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
 Frame = -1

Query: 344  PIITPAVGSFLLPV----RPGSMVGRSWRGC*VFGRR--QNQIDGSMMVRMPNPG 198
            PI+ PAVGS+L P      P S+   S+R    FG      Q D S   + P PG
Sbjct: 1317 PILAPAVGSYLTPTTRAHSPASLSFASYRQVASFGSAAPPRQFDASQFSQGPVPG 1371

>ITB4_HUMAN (P16144) Integrin beta-4 precursor (GP150) (CD104 antigen)|
          Length = 1822

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 82  FFACLLACCMLVPCCGRG 29
           + AC  AC  L+PCC RG
Sbjct: 735 YCACCKACLALLPCCNRG 752

>HIPK2_MOUSE (Q9QZR5) Homeodomain-interacting protein kinase 2 (EC 2.7.11.1)|
           (Nuclear body-associated kinase 1) (Sialophorin
           tail-associated nuclear serine/threonine-protein kinase)
          Length = 1196

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -1

Query: 353 HSVPIITPAVGSFLLPVRPGSMVGRSWRG 267
           ++VPI+T A G+  L ++PG +  ++W G
Sbjct: 681 NAVPIVTQAPGAQPLQIQPGLLAQQAWPG 709

>MAGE1_MACFA (Q9BE18) Melanoma-associated antigen E1 (MAGE-E1 antigen)|
          Length = 957

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
 Frame = +1

Query: 175 PGVSFPFLPGFGILTIIDPSIWFWRRPKT*QPLHERPTIEPGLTGSKNEPTAGVMMGTEC 354
           P  S P  PG G  T + P+              +  +I    T  K   T+G    TE 
Sbjct: 244 PSTSMPATPGEGRSTTMLPAA------------SDGQSISLVPTPGKGSSTSGPPTATEG 291

Query: 355 ITTSL----GEDPEPSVPP 399
           ++TS+    GE P  SVPP
Sbjct: 292 LSTSVQPTAGEGPSTSVPP 310

>EUTB_ECOLI (P0AEJ6) Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)|
           (Ethanolamine ammonia-lyase large subunit)
          Length = 453

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 294 FNGRSFMERLLGFRPAPEPDRWIDDGEDAESGE--EREGNP 178
           F+  + + +LL  RP+PE +RW++      +G   +R G+P
Sbjct: 409 FHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDP 449

>EUTB_ECO57 (P0AEJ7) Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)|
           (Ethanolamine ammonia-lyase large subunit)
          Length = 453

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 294 FNGRSFMERLLGFRPAPEPDRWIDDGEDAESGE--EREGNP 178
           F+  + + +LL  RP+PE +RW++      +G   +R G+P
Sbjct: 409 FHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDP 449

>STP10_ARATH (Q9LT15) Sugar transport protein 10 (Hexose transporter 10)|
          Length = 514

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 350 SVPIITPAVGSFLLPVRPGSMVGR 279
           +VP +   +GSF+LP  P SM+ R
Sbjct: 210 AVPAVVMVIGSFILPDTPNSMLER 233

>YWIE_CAEEL (Q23525) Hypothetical protein ZK546.14 in chromosome II|
          Length = 472

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -3

Query: 225 DDGEDAESGEEREGN 181
           DD ED+E GEE EGN
Sbjct: 163 DDDEDSEDGEEPEGN 177

>EUTB_SALTY (P19264) Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)|
           (Ethanolamine ammonia-lyase large subunit)
          Length = 453

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 294 FNGRSFMERLLGFRPAPEPDRWIDDGEDAESGE--EREGNP 178
           F+  + + +LL  RP+PE +RW++      +G   +R G+P
Sbjct: 409 FHDTATVRQLLNLRPSPEFERWLETMGIMANGRLTKRAGDP 449


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,531,937
Number of Sequences: 219361
Number of extensions: 954332
Number of successful extensions: 2858
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2856
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)