ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl07a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
2dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
3dbj|AK073825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
4ref|XM_744563.1| Aspergillus fumigatus Af293 salicylate hydroxyl... 44 0.40
5gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 44 0.40
6ref|NM_190656.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
7gb|AC026202.7| Homo sapiens chromosome 3 clone RP11-572B2 map 3p... 42 1.6
8emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 42 1.6
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
10gb|AC026203.3|AC026203 Homo sapiens chromosome 3 clone RP11-586C... 42 1.6
11gb|AC026164.5|AC026164 Homo sapiens chromosome 3 clone RP11-116K... 42 1.6
12dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
13dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
14gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.6
15ref|NM_126999.1| Arabidopsis thaliana unknown protein AT2G14340 ... 40 6.2
16gb|DQ214103.1| Taeniopygia guttata clone 0061P0019G02 RIKEN cDNA... 40 6.2
17ref|XM_450747.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
18gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 6.2
19gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.2
20gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynt... 40 6.2
21ref|XM_955003.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
22ref|XM_325690.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
24gb|AC009992.7|ATAC009992 Arabidopsis thaliana chromosome III BAC... 40 6.2
25gb|DQ446811.1| Arabidopsis thaliana clone pENTR221-At4g09400 hyp... 40 6.2
26emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 40 6.2
27emb|AL161514.2|ATCHRIV26 Arabidopsis thaliana DNA chromosome 4, ... 40 6.2
28gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
29gb|AC006304.4| Arabidopsis thaliana chromosome 2 clone T1O16 map... 40 6.2
30dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
31dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
32dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.2
33gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.2
34gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
35dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
36dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
37dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
38dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
39dbj|AK110980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
40dbj|AK105781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
41dbj|AK100361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
42gb|AY620521.1| Saguinus labiatus Alu insertion locus Aotus_F9_Sa... 40 6.2
43dbj|AK066614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
44gb|AC006567.1|AC006567 Arabidopsis thaliana BAC T15G18 from chro... 40 6.2 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                            
Query: 285      tccaagggcaaggcggcgttcgagctcaagcacaagctcgtccaagccctcaacaagatc 344
                ||||| |||||||| | ||||||||| ||||||| ||| ||||| ||| |||||||||| 
Sbjct: 21951910 tccaaaggcaaggccgtgttcgagctgaagcacaggctggtccaggccatcaacaagatt 21951851

                                       
Query: 345      gccgacagggacacctaccagat 367
                || ||||||||||||||||||||
Sbjct: 21951850 gcagacagggacacctaccagat 21951828



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 103      gcgcgccaccgccgccgctg 122
                ||||||||||||||||||||
Sbjct: 12574466 gcgcgccaccgccgccgctg 12574447
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>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1065_E04
          Length = 115865

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 285   tccaagggcaaggcggcgttcgagctcaagcacaagctcgtccaagccctcaacaagatc 344
             ||||| |||||||| | ||||||||| ||||||| ||| ||||| ||| |||||||||| 
Sbjct: 82627 tccaaaggcaaggccgtgttcgagctgaagcacaggctggtccaggccatcaacaagatt 82568

                                    
Query: 345   gccgacagggacacctaccagat 367
             || ||||||||||||||||||||
Sbjct: 82567 gcagacagggacacctaccagat 82545
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>dbj|AK073825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068E01, full
           insert sequence
          Length = 3036

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 285 tccaagggcaaggcggcgttcgagctcaagcacaagctcgtccaagccctcaacaagatc 344
           ||||| |||||||| | ||||||||| ||||||| ||| ||||| ||| |||||||||| 
Sbjct: 282 tccaaaggcaaggccgtgttcgagctgaagcacaggctggtccaggccatcaacaagatt 341

                                  
Query: 345 gccgacagggacacctaccagat 367
           || ||||||||||||||||||||
Sbjct: 342 gcagacagggacacctaccagat 364
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>ref|XM_744563.1| Aspergillus fumigatus Af293 salicylate hydroxylase (Afu2g05260)
            partial mRNA
          Length = 1323

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 199  tctgcaccagccactgagaccg 220
            ||||||||||||||||||||||
Sbjct: 1135 tctgcaccagccactgagaccg 1114
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 386    aaccaccgtcgacgccctggcc 407
              ||||||||||||||||||||||
Sbjct: 150638 aaccaccgtcgacgccctggcc 150617
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>ref|NM_190656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2139

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  agctcgtcgccgcaccgcttc 250
            |||||||||||||||||||||
Sbjct: 1938 agctcgtcgccgcaccgcttc 1958
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>gb|AC026202.7| Homo sapiens chromosome 3 clone RP11-572B2 map 3p, complete sequence
          Length = 204248

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    tgcttgtccccaggcaggcag 46
             |||||||||||||||||||||
Sbjct: 80313 tgcttgtccccaggcaggcag 80333
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 389    caccgtcgacgccctggccccggac 413
              |||||||| ||||||||||||||||
Sbjct: 196991 caccgtcgccgccctggccccggac 197015
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 230      agctcgtcgccgcaccgcttc 250
                |||||||||||||||||||||
Sbjct: 36790865 agctcgtcgccgcaccgcttc 36790885
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>gb|AC026203.3|AC026203 Homo sapiens chromosome 3 clone RP11-586C2 map 3p, complete sequence
          Length = 181164

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    tgcttgtccccaggcaggcag 46
             |||||||||||||||||||||
Sbjct: 80866 tgcttgtccccaggcaggcag 80886
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>gb|AC026164.5|AC026164 Homo sapiens chromosome 3 clone RP11-116K5 map 3p, complete sequence
          Length = 155769

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    tgcttgtccccaggcaggcag 46
             |||||||||||||||||||||
Sbjct: 37529 tgcttgtccccaggcaggcag 37549
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>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1096A10
          Length = 150976

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  agctcgtcgccgcaccgcttc 250
            |||||||||||||||||||||
Sbjct: 6443 agctcgtcgccgcaccgcttc 6463
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>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0529E05
          Length = 134982

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 230    agctcgtcgccgcaccgcttc 250
              |||||||||||||||||||||
Sbjct: 117180 agctcgtcgccgcaccgcttc 117200
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 267     tccagcacggccgccccgtcc 287
               |||||||||||||||||||||
Sbjct: 3254741 tccagcacggccgccccgtcc 3254761
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>ref|NM_126999.1| Arabidopsis thaliana unknown protein AT2G14340 mRNA, complete cds
          Length = 663

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 417 gtcggccccttcctctcctgcgtc 440
           |||||| |||||||||||||||||
Sbjct: 36  gtcggcgccttcctctcctgcgtc 59
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>gb|DQ214103.1| Taeniopygia guttata clone 0061P0019G02 RIKEN cDNA 2610002I17
           gene-like mRNA, complete sequence
          Length = 1449

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 ggatgaagtccagcacggcc 278
           ||||||||||||||||||||
Sbjct: 480 ggatgaagtccagcacggcc 461
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>ref|XM_450747.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1992

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 gcgcgccaccgccgccgctg 122
           ||||||||||||||||||||
Sbjct: 966 gcgcgccaccgccgccgctg 947
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 432     tcctgcgtcatcgacaccgacgcg 455
               ||||||||| ||||||||||||||
Sbjct: 3286139 tcctgcgtcgtcgacaccgacgcg 3286162
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 103     gcgcgccaccgccgccgctg 122
               ||||||||||||||||||||
Sbjct: 1132047 gcgcgccaccgccgccgctg 1132028
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>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster,
             complete sequence
          Length = 99892

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   gtcatcgacaccgacgcgga 457
             ||||||||||||||||||||
Sbjct: 99534 gtcatcgacaccgacgcgga 99515
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>ref|XM_955003.1| Neurospora crassa OR74A hypothetical protein (NCU05836.1) partial
           mRNA
          Length = 1776

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 tcgagctcaagcacaagctc 323
           ||||||||||||||||||||
Sbjct: 233 tcgagctcaagcacaagctc 252
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>ref|XM_325690.1| Neurospora crassa OR74A hypothetical protein (NCU05836.1) partial
           mRNA
          Length = 1776

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 tcgagctcaagcacaagctc 323
           ||||||||||||||||||||
Sbjct: 233 tcgagctcaagcacaagctc 252
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     gagcgcgccaccgccgccgc 120
               ||||||||||||||||||||
Sbjct: 6992682 gagcgcgccaccgccgccgc 6992701
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>gb|AC009992.7|ATAC009992 Arabidopsis thaliana chromosome III BAC T4P3 genomic sequence, complete
             sequence
          Length = 96583

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 417   gtcggccccttcctctcctgcgtc 440
             |||||| |||||||||||||||||
Sbjct: 25335 gtcggcgccttcctctcctgcgtc 25312
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>gb|DQ446811.1| Arabidopsis thaliana clone pENTR221-At4g09400 hypothetical protein
           (At4g09400) mRNA, complete cds
          Length = 630

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 417 gtcggccccttcctctcctgcgtc 440
           |||||| |||||||||||||||||
Sbjct: 3   gtcggcgccttcctctcctgcgtc 26
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>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 384    caaaccaccgtcgacgccctggcc 407
              |||||||||| |||||||||||||
Sbjct: 256526 caaaccaccggcgacgccctggcc 256549
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>emb|AL161514.2|ATCHRIV26 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 26
          Length = 199754

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 417    gtcggccccttcctctcctgcgtc 440
              |||||| |||||||||||||||||
Sbjct: 166401 gtcggcgccttcctctcctgcgtc 166378
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>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11,
             complete sequence
          Length = 123620

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   gagcgcgccaccgccgccgc 120
             ||||||||||||||||||||
Sbjct: 89683 gagcgcgccaccgccgccgc 89664
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>gb|AC006304.4| Arabidopsis thaliana chromosome 2 clone T1O16 map mi398, complete
             sequence
          Length = 89281

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 417   gtcggccccttcctctcctgcgtc 440
             |||||| |||||||||||||||||
Sbjct: 37919 gtcggcgccttcctctcctgcgtc 37896
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 239      ccgcaccgcttcttccgccg 258
                ||||||||||||||||||||
Sbjct: 26004167 ccgcaccgcttcttccgccg 26004148
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     gagcgcgccaccgccgccgc 120
               ||||||||||||||||||||
Sbjct: 6990577 gagcgcgccaccgccgccgc 6990596
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 387     accaccgtcgacgccctggc 406
               ||||||||||||||||||||
Sbjct: 3753713 accaccgtcgacgccctggc 3753732
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 51      cgccggcggagagcgagcgg 70
               ||||||||||||||||||||
Sbjct: 4754787 cgccggcggagagcgagcgg 4754806



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 274     cggccgccccgtccaagggcaagg 297
               ||||||||||| ||||||||||||
Sbjct: 1894999 cggccgccccggccaagggcaagg 1895022
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>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
              complete sequence
          Length = 166072

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    gagcgcgccaccgccgccgc 120
              ||||||||||||||||||||
Sbjct: 159279 gagcgcgccaccgccgccgc 159298
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>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0545E05
          Length = 163229

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    gagcgcgccaccgccgccgc 120
              ||||||||||||||||||||
Sbjct: 134271 gagcgcgccaccgccgccgc 134252
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>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   ccgcaccgcttcttccgccg 258
             ||||||||||||||||||||
Sbjct: 42025 ccgcaccgcttcttccgccg 42006
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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0041C07
          Length = 179047

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   gcgcgccaccgccgccgctg 122
             ||||||||||||||||||||
Sbjct: 40404 gcgcgccaccgccgccgctg 40385
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>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0711A01
          Length = 162400

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   gcgcgccaccgccgccgctg 122
             ||||||||||||||||||||
Sbjct: 89793 gcgcgccaccgccgccgctg 89774
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>dbj|AK110980.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C08, full
           insert sequence
          Length = 1456

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 gagcgcgccaccgccgccgc 120
           ||||||||||||||||||||
Sbjct: 242 gagcgcgccaccgccgccgc 261
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>dbj|AK105781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G04, full
           insert sequence
          Length = 1415

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 101 gagcgcgccaccgccgccgc 120
           ||||||||||||||||||||
Sbjct: 730 gagcgcgccaccgccgccgc 711
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>dbj|AK100361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083M02, full
           insert sequence
          Length = 1652

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 101 gagcgcgccaccgccgccgc 120
           ||||||||||||||||||||
Sbjct: 720 gagcgcgccaccgccgccgc 701
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>gb|AY620521.1| Saguinus labiatus Alu insertion locus Aotus_F9_Saguinus_16 sequence
          Length = 247

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 cctccagccctcacccccat 173
           ||||||||||||||||||||
Sbjct: 75  cctccagccctcacccccat 94
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>dbj|AK066614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074N01, full
           insert sequence
          Length = 3250

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 101 gagcgcgccaccgccgccgc 120
           ||||||||||||||||||||
Sbjct: 366 gagcgcgccaccgccgccgc 347
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>gb|AC006567.1|AC006567 Arabidopsis thaliana BAC T15G18 from chromosome IV, near 25 cM,
             complete sequence
          Length = 113800

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 417   gtcggccccttcctctcctgcgtc 440
             |||||| |||||||||||||||||
Sbjct: 97659 gtcggcgccttcctctcctgcgtc 97682


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,131,663
Number of Sequences: 3902068
Number of extensions: 3131663
Number of successful extensions: 85308
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83971
Number of HSP's gapped (non-prelim): 1337
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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