ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467637.1| Oryza sativa (japonica cultivar-group), mRNA 446 e-122
2dbj|AK121868.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
3dbj|AK072905.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 313 2e-82
5dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 313 2e-82
6ref|NM_102172.1| Arabidopsis thaliana unknown protein AT1G23230 ... 62 1e-06
7gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana... 62 1e-06
8gb|AC002311.1| Arabidopsis thaliana chromosome I BAC T26J12 geno... 62 1e-06
9gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosom... 48 0.022
10emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chro... 48 0.022
11emb|BX901919.8| Zebrafish DNA sequence from clone DKEY-30I6 in l... 42 1.4
12gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome ... 42 1.4
13emb|BX323452.15| Zebrafish DNA sequence from clone DKEYP-56C5 in... 42 1.4
14gb|AC135357.3| Mus musculus chromosome 8 clone RP24-84L15, compl... 40 5.4
15gb|AC123507.4| Rattus norvegicus 11 BAC CH230-18C5 (Children's H... 40 5.4
16emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 ... 40 5.4
17gb|AC006996.3| Homo sapiens BAC clone RP11-445J11 from 7, comple... 40 5.4
18gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 5.4
19emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H1... 40 5.4
20emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 5.4
21gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence 40 5.4
22gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complet... 40 5.4
23gb|AC098483.2| Homo sapiens chromosome 1 clone RP11-438F14, comp... 40 5.4
24gb|AC093429.2| Homo sapiens chromosome 1 clone RP11-465K1, compl... 40 5.4
25gb|AC079226.7| Homo sapiens BAC clone RP11-18D7 from 4, complete... 40 5.4
26gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, com... 40 5.4
27emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.4
28emb|AL929543.7| Zebrafish DNA sequence from clone CH211-166M10 i... 40 5.4
29gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 5.4
30emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in ... 40 5.4
31emb|CT009490.7| M.truncatula DNA sequence from clone MTH2-174P8 ... 40 5.4
32emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chr... 40 5.4 
>ref|XM_467637.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 5380

 Score =  446 bits (225), Expect = e-122
 Identities = 357/401 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    aggcaaacagatagatgagtggtggaaacagatgacgaaagcttcgggagagagaatgat 60
            |||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||||
Sbjct: 1992 aggcaaacagatagatgagtggtggagacaaatgacaaaagcttctggggagaggatgat 2051

                                                                        
Query: 61   agattttatgaacttggatgaacgagcaatgggcatgttttgggttctctcgttcaccat 120
            |||||||| || ||||||||| || || ||||||||||||||||||||||| ||||||||
Sbjct: 2052 agattttacgagcttggatgagcgggcgatgggcatgttttgggttctctccttcaccat 2111

                                                                        
Query: 121  ggcacaaccagcatgtgatgcagtcatgacctggtttacatcagctggaggggcagaatt 180
            |||||||||||||||||| |||||||||| ||||||||||||||  ||||  ||||| ||
Sbjct: 2112 ggcacaaccagcatgtgaagcagtcatgaactggtttacatcagtaggagtagcagattt 2171

                                                                        
Query: 181  catgcagggacccaatatgcaaccaaatgaaagagtgacgatgatgcatgaaacttaccc 240
             || |||||||||||| |||| |||||||||||| |||| ||||||| ||||||||| ||
Sbjct: 2172 aattcagggacccaatttgcagccaaatgaaagaatgacaatgatgcgtgaaacttatcc 2231

                                                                        
Query: 241  tttgtcaatgtcattgctttctgggttgtctatcaacttgtgtttgaagcttgctttcca 300
              |||| |||||||||||||||||||||||||||||  | |||||||| |||||||||||
Sbjct: 2232 actgtctatgtcattgctttctgggttgtctatcaatctatgtttgaaacttgctttcca 2291

                                                                        
Query: 301  gcttgaagagactatattccttggccaggctgttcctagcattgctatggtggaaaccta 360
            |||||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||||
Sbjct: 2292 gcttgaagagaccatatttcttggccagaatgttcctagcattgctatagtggaaaccta 2351

                                                     
Query: 361  tgtcaggttgctgcttataacaccgcattcattgttccgcc 401
            ||| ||  ||||||||||||| || ||||||||||||||||
Sbjct: 2352 tgttagactgctgcttataacccctcattcattgttccgcc 2392
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>dbj|AK121868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103L16, full
            insert sequence
          Length = 5381

 Score =  446 bits (225), Expect = e-122
 Identities = 357/401 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    aggcaaacagatagatgagtggtggaaacagatgacgaaagcttcgggagagagaatgat 60
            |||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||||
Sbjct: 1992 aggcaaacagatagatgagtggtggagacaaatgacaaaagcttctggggagaggatgat 2051

                                                                        
Query: 61   agattttatgaacttggatgaacgagcaatgggcatgttttgggttctctcgttcaccat 120
            |||||||| || ||||||||| || || ||||||||||||||||||||||| ||||||||
Sbjct: 2052 agattttacgagcttggatgagcgggcgatgggcatgttttgggttctctccttcaccat 2111

                                                                        
Query: 121  ggcacaaccagcatgtgatgcagtcatgacctggtttacatcagctggaggggcagaatt 180
            |||||||||||||||||| |||||||||| ||||||||||||||  ||||  ||||| ||
Sbjct: 2112 ggcacaaccagcatgtgaagcagtcatgaactggtttacatcagtaggagtagcagattt 2171

                                                                        
Query: 181  catgcagggacccaatatgcaaccaaatgaaagagtgacgatgatgcatgaaacttaccc 240
             || |||||||||||| |||| |||||||||||| |||| ||||||| ||||||||| ||
Sbjct: 2172 aattcagggacccaatttgcagccaaatgaaagaatgacaatgatgcgtgaaacttatcc 2231

                                                                        
Query: 241  tttgtcaatgtcattgctttctgggttgtctatcaacttgtgtttgaagcttgctttcca 300
              |||| |||||||||||||||||||||||||||||  | |||||||| |||||||||||
Sbjct: 2232 actgtctatgtcattgctttctgggttgtctatcaatctatgtttgaaacttgctttcca 2291

                                                                        
Query: 301  gcttgaagagactatattccttggccaggctgttcctagcattgctatggtggaaaccta 360
            |||||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||||
Sbjct: 2292 gcttgaagagaccatatttcttggccagaatgttcctagcattgctatagtggaaaccta 2351

                                                     
Query: 361  tgtcaggttgctgcttataacaccgcattcattgttccgcc 401
            ||| ||  ||||||||||||| || ||||||||||||||||
Sbjct: 2352 tgttagactgctgcttataacccctcattcattgttccgcc 2392
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>dbj|AK072905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146J04, full
            insert sequence
          Length = 2613

 Score =  446 bits (225), Expect = e-122
 Identities = 357/401 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    aggcaaacagatagatgagtggtggaaacagatgacgaaagcttcgggagagagaatgat 60
            |||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||||
Sbjct: 1959 aggcaaacagatagatgagtggtggagacaaatgacaaaagcttctggggagaggatgat 2018

                                                                        
Query: 61   agattttatgaacttggatgaacgagcaatgggcatgttttgggttctctcgttcaccat 120
            |||||||| || ||||||||| || || ||||||||||||||||||||||| ||||||||
Sbjct: 2019 agattttacgagcttggatgagcgggcgatgggcatgttttgggttctctccttcaccat 2078

                                                                        
Query: 121  ggcacaaccagcatgtgatgcagtcatgacctggtttacatcagctggaggggcagaatt 180
            |||||||||||||||||| |||||||||| ||||||||||||||  ||||  ||||| ||
Sbjct: 2079 ggcacaaccagcatgtgaagcagtcatgaactggtttacatcagtaggagtagcagattt 2138

                                                                        
Query: 181  catgcagggacccaatatgcaaccaaatgaaagagtgacgatgatgcatgaaacttaccc 240
             || |||||||||||| |||| |||||||||||| |||| ||||||| ||||||||| ||
Sbjct: 2139 aattcagggacccaatttgcagccaaatgaaagaatgacaatgatgcgtgaaacttatcc 2198

                                                                        
Query: 241  tttgtcaatgtcattgctttctgggttgtctatcaacttgtgtttgaagcttgctttcca 300
              |||| |||||||||||||||||||||||||||||  | |||||||| |||||||||||
Sbjct: 2199 actgtctatgtcattgctttctgggttgtctatcaatctatgtttgaaacttgctttcca 2258

                                                                        
Query: 301  gcttgaagagactatattccttggccaggctgttcctagcattgctatggtggaaaccta 360
            |||||||||||| ||||| |||||||||  |||||||||||||||||| |||||||||||
Sbjct: 2259 gcttgaagagaccatatttcttggccagaatgttcctagcattgctatagtggaaaccta 2318

                                                     
Query: 361  tgtcaggttgctgcttataacaccgcattcattgttccgcc 401
            ||| ||  ||||||||||||| || ||||||||||||||||
Sbjct: 2319 tgttagactgctgcttataacccctcattcattgttccgcc 2359
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  313 bits (158), Expect = 2e-82
 Identities = 257/290 (88%)
 Strand = Plus / Minus

                                                                            
Query: 40       agcttcgggagagagaatgatagattttatgaacttggatgaacgagcaatgggcatgtt 99
                |||||| || ||||| ||||||||||||| || ||||||||| || || |||||||||||
Sbjct: 30568057 agcttctggggagaggatgatagattttacgagcttggatgagcgggcgatgggcatgtt 30567998

                                                                            
Query: 100      ttgggttctctcgttcaccatggcacaaccagcatgtgatgcagtcatgacctggtttac 159
                |||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 30567997 ttgggttctctccttcaccatggcacaaccagcatgtgaagcagtcatgaactggtttac 30567938

                                                                            
Query: 160      atcagctggaggggcagaattcatgcagggacccaatatgcaaccaaatgaaagagtgac 219
                |||||  ||||  ||||| || || |||||||||||| |||| |||||||||||| ||||
Sbjct: 30567937 atcagtaggagtagcagatttaattcagggacccaatttgcagccaaatgaaagaatgac 30567878

                                                                            
Query: 220      gatgatgcatgaaacttaccctttgtcaatgtcattgctttctgggttgtctatcaactt 279
                 ||||||| ||||||||| ||  |||| |||||||||||||||||||||||||||||  |
Sbjct: 30567877 aatgatgcgtgaaacttatccactgtctatgtcattgctttctgggttgtctatcaatct 30567818

                                                                  
Query: 280      gtgtttgaagcttgctttccagcttgaagagactatattccttggccagg 329
                 |||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 30567817 atgtttgaaacttgctttccagcttgaagagaccatatttcttggccagg 30567768



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                            
Query: 331      tgttcctagcattgctatggtggaaacctatgtcaggttgctgcttataacaccgcattc 390
                |||||||||||||||||| |||||||||||||| ||  ||||||||||||| || |||||
Sbjct: 30567355 tgttcctagcattgctatagtggaaacctatgttagactgctgcttataacccctcattc 30567296

                           
Query: 391      attgttccgcc 401
                |||||||||||
Sbjct: 30567295 attgttccgcc 30567285



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 1        aggcaaacagatagatgagtggtggaaacagatgacgaaag 41
                |||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 30568399 aggcaaacagatagatgagtggtggagacaaatgacaaaag 30568359
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>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643A10
          Length = 187931

 Score =  313 bits (158), Expect = 2e-82
 Identities = 257/290 (88%)
 Strand = Plus / Minus

                                                                         
Query: 40    agcttcgggagagagaatgatagattttatgaacttggatgaacgagcaatgggcatgtt 99
             |||||| || ||||| ||||||||||||| || ||||||||| || || |||||||||||
Sbjct: 80065 agcttctggggagaggatgatagattttacgagcttggatgagcgggcgatgggcatgtt 80006

                                                                         
Query: 100   ttgggttctctcgttcaccatggcacaaccagcatgtgatgcagtcatgacctggtttac 159
             |||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 80005 ttgggttctctccttcaccatggcacaaccagcatgtgaagcagtcatgaactggtttac 79946

                                                                         
Query: 160   atcagctggaggggcagaattcatgcagggacccaatatgcaaccaaatgaaagagtgac 219
             |||||  ||||  ||||| || || |||||||||||| |||| |||||||||||| ||||
Sbjct: 79945 atcagtaggagtagcagatttaattcagggacccaatttgcagccaaatgaaagaatgac 79886

                                                                         
Query: 220   gatgatgcatgaaacttaccctttgtcaatgtcattgctttctgggttgtctatcaactt 279
              ||||||| ||||||||| ||  |||| |||||||||||||||||||||||||||||  |
Sbjct: 79885 aatgatgcgtgaaacttatccactgtctatgtcattgctttctgggttgtctatcaatct 79826

                                                               
Query: 280   gtgtttgaagcttgctttccagcttgaagagactatattccttggccagg 329
              |||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 79825 atgtttgaaacttgctttccagcttgaagagaccatatttcttggccagg 79776



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                         
Query: 331   tgttcctagcattgctatggtggaaacctatgtcaggttgctgcttataacaccgcattc 390
             |||||||||||||||||| |||||||||||||| ||  ||||||||||||| || |||||
Sbjct: 79363 tgttcctagcattgctatagtggaaacctatgttagactgctgcttataacccctcattc 79304

                        
Query: 391   attgttccgcc 401
             |||||||||||
Sbjct: 79303 attgttccgcc 79293



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 1     aggcaaacagatagatgagtggtggaaacagatgacgaaag 41
             |||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 80407 aggcaaacagatagatgagtggtggagacaaatgacaaaag 80367
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>ref|NM_102172.1| Arabidopsis thaliana unknown protein AT1G23230 mRNA, complete cds
          Length = 4848

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 92   ggcatgttttgggttctctcgttcaccatggcacaaccagcatgtga 138
            ||||||||||||||| | || | ||||||||||||||||||||||||
Sbjct: 1951 ggcatgttttgggttgtttcctacaccatggcacaaccagcatgtga 1997



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 324  gccaggctgttcctagcattgctatggt 351
            |||||| ||||||||||||||| |||||
Sbjct: 2174 gccaggttgttcctagcattgcaatggt 2201
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>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I,
             complete sequence
          Length = 99053

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 92    ggcatgttttgggttctctcgttcaccatggcacaaccagcatgtga 138
             ||||||||||||||| | || | ||||||||||||||||||||||||
Sbjct: 23589 ggcatgttttgggttgtttcctacaccatggcacaaccagcatgtga 23635
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>gb|AC002311.1| Arabidopsis thaliana chromosome I BAC T26J12 genomic sequence,
            complete sequence
          Length = 85855

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 92   ggcatgttttgggttctctcgttcaccatggcacaaccagcatgtga 138
            ||||||||||||||| | || | ||||||||||||||||||||||||
Sbjct: 3426 ggcatgttttgggttgtttcctacaccatggcacaaccagcatgtga 3380
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>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete
             sequence
          Length = 175685

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 60    tagattttatgaacttggatgaac 83
             ||||||||||||||||||||||||
Sbjct: 42571 tagattttatgaacttggatgaac 42594
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>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete
             sequence
          Length = 203022

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 60    tagattttatgaacttggatgaac 83
             ||||||||||||||||||||||||
Sbjct: 58365 tagattttatgaacttggatgaac 58388
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>emb|BX901919.8| Zebrafish DNA sequence from clone DKEY-30I6 in linkage group 25, complete
              sequence
          Length = 233401

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     ttttatgaacttggatgaacg 84
              |||||||||||||||||||||
Sbjct: 217941 ttttatgaacttggatgaacg 217961
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>gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome 14, complete sequence
          Length = 227675

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 47     ggagagagaatgatagatttt 67
              |||||||||||||||||||||
Sbjct: 213487 ggagagagaatgatagatttt 213467
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>emb|BX323452.15| Zebrafish DNA sequence from clone DKEYP-56C5 in linkage group 25,
              complete sequence
          Length = 162709

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 26     aaacagatgacgaaagcttcgggag 50
              ||||||||| |||||||||||||||
Sbjct: 123189 aaacagatgtcgaaagcttcgggag 123213
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>gb|AC135357.3| Mus musculus chromosome 8 clone RP24-84L15, complete sequence
          Length = 175089

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tggtttacatcagctggagg 171
              ||||||||||||||||||||
Sbjct: 129760 tggtttacatcagctggagg 129741
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>gb|AC123507.4| Rattus norvegicus 11 BAC CH230-18C5 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 166073

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   ctggtttacatcagctggag 170
             ||||||||||||||||||||
Sbjct: 36739 ctggtttacatcagctggag 36720
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>emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 in linkage group 5,
              complete sequence
          Length = 147626

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    aatgaaagagtgacgatgat 225
              ||||||||||||||||||||
Sbjct: 112598 aatgaaagagtgacgatgat 112617
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>gb|AC006996.3| Homo sapiens BAC clone RP11-445J11 from 7, complete sequence
          Length = 148819

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tagattttatgaacttggat 79
             ||||||||||||||||||||
Sbjct: 36724 tagattttatgaacttggat 36705
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     tggaaacagatgacgaaagc 42
              ||||||||||||||||||||
Sbjct: 783263 tggaaacagatgacgaaagc 783282
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>emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H10 on chromosome 10 Contains a
              vomeronasal receptor (V1R) pseudogene, a cubilin (intrinsic
              factor-cobalamin receptor) (CUBN) pseudogene, gene
              KIAA0187, two novel genes, the gene for a novel protein
              similar to Ras suppressor protein 1 (RSU1) and four CpG
              islands, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    ttgaagagactatattcctt 322
              ||||||||||||||||||||
Sbjct: 115495 ttgaagagactatattcctt 115476
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 56      atgatagattttatgaactt 75
               ||||||||||||||||||||
Sbjct: 2337217 atgatagattttatgaactt 2337198
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>gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence
          Length = 155629

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ttgaagagactatattcctt 322
             ||||||||||||||||||||
Sbjct: 48506 ttgaagagactatattcctt 48525
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>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence
          Length = 112123

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 112   gttcaccatggcacaaccagcatg 135
             ||||||||||||| ||||||||||
Sbjct: 26227 gttcaccatggcagaaccagcatg 26204
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>gb|AC098483.2| Homo sapiens chromosome 1 clone RP11-438F14, complete sequence
          Length = 177865

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 285    tgaagcttgctttccagcttgaagagac 312
              |||||||| ||||| |||||||||||||
Sbjct: 105781 tgaagcttactttctagcttgaagagac 105754
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>gb|AC093429.2| Homo sapiens chromosome 1 clone RP11-465K1, complete sequence
          Length = 182165

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    atgggcatgttttgggttct 108
             ||||||||||||||||||||
Sbjct: 90208 atgggcatgttttgggttct 90189
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>gb|AC079226.7| Homo sapiens BAC clone RP11-18D7 from 4, complete sequence
          Length = 184032

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 115    caccatggcacaaccagcatgtga 138
              |||||||| |||||||||||||||
Sbjct: 157582 caccatggaacaaccagcatgtga 157605
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>gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, complete sequence
          Length = 105308

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cttaccctttgtcaatgtca 253
              ||||||||||||||||||||
Sbjct: 105055 cttaccctttgtcaatgtca 105036
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 309     agactatattccttggccaggctg 332
               |||| |||||||||||||||||||
Sbjct: 1244746 agacgatattccttggccaggctg 1244769
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>emb|AL929543.7| Zebrafish DNA sequence from clone CH211-166M10 in linkage group 17,
             complete sequence
          Length = 147094

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   cttgctttccagcttgaaga 309
             ||||||||||||||||||||
Sbjct: 98487 cttgctttccagcttgaaga 98468
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 291     ttgctttccagcttgaagag 310
               ||||||||||||||||||||
Sbjct: 4047597 ttgctttccagcttgaagag 4047616
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>emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in linkage group 5,
             complete sequence
          Length = 227454

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   aatgaaagagtgacgatgat 225
             ||||||||||||||||||||
Sbjct: 40395 aatgaaagagtgacgatgat 40376
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>emb|CT009490.7| M.truncatula DNA sequence from clone MTH2-174P8 on chromosome 3,
             complete sequence
          Length = 107411

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   gatgatgcatgaaacttacc 239
             ||||||||||||||||||||
Sbjct: 98388 gatgatgcatgaaacttacc 98407
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>emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chromosome 2, complete
             sequence
          Length = 184736

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 316   attccttggccaggctgttcctagcatt 343
             |||||||||||||||||| || ||||||
Sbjct: 22163 attccttggccaggctgtacccagcatt 22136


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,007,113
Number of Sequences: 3902068
Number of extensions: 4007113
Number of successful extensions: 69772
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69652
Number of HSP's gapped (non-prelim): 120
length of query: 401
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 379
effective length of database: 17,147,199,772
effective search space: 6498788713588
effective search space used: 6498788713588
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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