ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl06h06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1591 Score = 147 bits (74), Expect = 2e-32 Identities = 143/166 (86%) Strand = Plus / Plus Query: 42 ggccatggacgaggcgctcgccctggtgccggggctcgtcgacatcctcgtcctcgccgg 101 ||||||||| ||| ||||| | |||||| ||| |||||||| |||||||||||||||| Sbjct: 44 ggccatggaggagttgctcggcttggtgcggggcttcgtcgacgtcctcgtcctcgccgg 103 Query: 102 cggccgcgcctcctccggcgccgccgtcacctggcgccccggcgacgtccggaaggccct 161 ||||||| |||| || |||||||||| |||||||||| |||| |||||| ||||||||| Sbjct: 104 cggccgcacctcgtctggcgccgccgccacctggcgctccggtgacgtcaagaaggccct 163 Query: 162 ccgctgggcgctcttcttcgaggaggtattcaggagcctgcgtgac 207 || ||||| ||||||||||||||||| |||| || |||||||||| Sbjct: 164 ccaatgggccctcttcttcgaggaggttttcaagaacctgcgtgac 209
>dbj|AK066382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064K05, full insert sequence Length = 1591 Score = 147 bits (74), Expect = 2e-32 Identities = 143/166 (86%) Strand = Plus / Plus Query: 42 ggccatggacgaggcgctcgccctggtgccggggctcgtcgacatcctcgtcctcgccgg 101 ||||||||| ||| ||||| | |||||| ||| |||||||| |||||||||||||||| Sbjct: 44 ggccatggaggagttgctcggcttggtgcggggcttcgtcgacgtcctcgtcctcgccgg 103 Query: 102 cggccgcgcctcctccggcgccgccgtcacctggcgccccggcgacgtccggaaggccct 161 ||||||| |||| || |||||||||| |||||||||| |||| |||||| ||||||||| Sbjct: 104 cggccgcacctcgtctggcgccgccgccacctggcgctccggtgacgtcaagaaggccct 163 Query: 162 ccgctgggcgctcttcttcgaggaggtattcaggagcctgcgtgac 207 || ||||| ||||||||||||||||| |||| || |||||||||| Sbjct: 164 ccaatgggccctcttcttcgaggaggttttcaagaacctgcgtgac 209
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 137 bits (69), Expect = 2e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 42 ggccatggacgaggcgctcgccctggtgccggggctcgtcgacatcctcgtcctcgccgg 101 ||||||||| ||| ||||| | |||||| ||| |||||||| |||||||||||||||| Sbjct: 34929267 ggccatggaggagttgctcggcttggtgcggggcttcgtcgacgtcctcgtcctcgccgg 34929208 Query: 102 cggccgcgcctcctccggcgccgccgtcacctggcgccccggcgacgtccggaaggccct 161 ||||||| |||| || |||||||||| |||||||||| |||| |||||| ||||||||| Sbjct: 34929207 cggccgcacctcgtctggcgccgccgccacctggcgctccggtgacgtcaagaaggccct 34929148 Query: 162 ccgctgggcgctcttcttcgaggaggtat 190 || ||||| ||||||||||||||||||| Sbjct: 34929147 ccaatgggccctcttcttcgaggaggtat 34929119
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 137 bits (69), Expect = 2e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 42 ggccatggacgaggcgctcgccctggtgccggggctcgtcgacatcctcgtcctcgccgg 101 ||||||||| ||| ||||| | |||||| ||| |||||||| |||||||||||||||| Sbjct: 88764 ggccatggaggagttgctcggcttggtgcggggcttcgtcgacgtcctcgtcctcgccgg 88705 Query: 102 cggccgcgcctcctccggcgccgccgtcacctggcgccccggcgacgtccggaaggccct 161 ||||||| |||| || |||||||||| |||||||||| |||| |||||| ||||||||| Sbjct: 88704 cggccgcacctcgtctggcgccgccgccacctggcgctccggtgacgtcaagaaggccct 88645 Query: 162 ccgctgggcgctcttcttcgaggaggtat 190 || ||||| ||||||||||||||||||| Sbjct: 88644 ccaatgggccctcttcttcgaggaggtat 88616
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 46.1 bits (23), Expect = 0.048 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 tggacgaggcgctcgccctggtg 69 ||||||||||||||||||||||| Sbjct: 3295236 tggacgaggcgctcgccctggtg 3295258
>ref|XM_550303.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 102 cggccgcgcctcctccggcgccgccg 127 |||||||||||||||| ||||||||| Sbjct: 341 cggccgcgcctcctcccgcgccgccg 316
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 cctcgccggcggccgcgcctcctccg 118 |||||||||||||||| ||||||||| Sbjct: 119801 cctcgccggcggccgctcctcctccg 119776
>ref|XM_955606.1| Neurospora crassa OR74A hypothetical protein (NCU06654.1) partial mRNA Length = 2508 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 74 ggctcgtcgacatcctcgtcctcgcc 99 ||||||||||| |||||||||||||| Sbjct: 2345 ggctcgtcgacttcctcgtcctcgcc 2320
>ref|XM_326939.1| Neurospora crassa OR74A hypothetical protein (NCU06654.1) partial mRNA Length = 2508 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 74 ggctcgtcgacatcctcgtcctcgcc 99 ||||||||||| |||||||||||||| Sbjct: 2345 ggctcgtcgacttcctcgtcctcgcc 2320
>emb|AL670542.1|NC18A7 Neurospora crassa DNA linkage group V cosmid contig 18A7 Length = 77690 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 ggctcgtcgacatcctcgtcctcgcc 99 ||||||||||| |||||||||||||| Sbjct: 61239 ggctcgtcgacttcctcgtcctcgcc 61264
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 cctcgccggcggccgcgcctcctccg 118 |||||||||||||||| ||||||||| Sbjct: 27889384 cctcgccggcggccgctcctcctccg 27889359
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 102 cggccgcgcctcctccggcgccgccg 127 |||||||||||||||| ||||||||| Sbjct: 3854694 cggccgcgcctcctcccgcgccgccg 3854719 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cctcctccggcgccgccgtc 129 |||||||||||||||||||| Sbjct: 5372818 cctcctccggcgccgccgtc 5372799
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 102 cggccgcgcctcctccggcgccgccg 127 |||||||||||||||| ||||||||| Sbjct: 128236 cggccgcgcctcctcccgcgccgccg 128261
>dbj|AK071289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088B10, full insert sequence Length = 888 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 102 cggccgcgcctcctccggcgccgccg 127 |||||||||||||||| ||||||||| Sbjct: 341 cggccgcgcctcctcccgcgccgccg 316
>ref|XM_550501.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 ccgcgcctcctccggcgccgccgtc 129 |||||||||||||| |||||||||| Sbjct: 202 ccgcgcctcctccgccgccgccgtc 178
>ref|NM_006283.1| Homo sapiens transforming, acidic coiled-coil containing protein 1 (TACC1), mRNA Length = 7758 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 cctcgtcctcgccggcggccgcgcc 111 |||||||||||||||||||| |||| Sbjct: 414 cctcgtcctcgccggcggccccgcc 390
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 tcctccggcgccgccgtcacc 132 ||||||||||||||||||||| Sbjct: 2058764 tcctccggcgccgccgtcacc 2058784
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 0.76 Identities = 27/29 (93%) Strand = Plus / Minus Query: 99 cggcggccgcgcctcctccggcgccgccg 127 |||||||||||| ||||||||||||||| Sbjct: 301340 cggcggccgcgcgccctccggcgccgccg 301312
>gb|AY177411.1| Homo sapiens transforming acidic coiled-coil containing protein 1 short isoform (TACC1) mRNA, complete cds Length = 6528 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 cctcgtcctcgccggcggccgcgcc 111 |||||||||||||||||||| |||| Sbjct: 414 cctcgtcctcgccggcggccccgcc 390
>ref|XM_863719.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9430.2), mRNA Length = 2901 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 aggagcaggaaatggcggccatgga 50 |||||||||||||||| |||||||| Sbjct: 2516 aggagcaggaaatggctgccatgga 2540
>ref|XM_657760.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5248.2), mRNA Length = 2364 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 aggagcaggaaatggcggccatgga 50 |||||||||||||||| |||||||| Sbjct: 2144 aggagcaggaaatggctgccatgga 2168
>ref|XM_850011.1| PREDICTED: Canis familiaris similar to RING finger and KH domain containing protein 1 (LOC612270), mRNA Length = 1656 Score = 42.1 bits (21), Expect = 0.76 Identities = 39/45 (86%) Strand = Plus / Plus Query: 76 ctcgtcgacatcctcgtcctcgccggcggccgcgcctcctccggc 120 ||||||| | |||||||||||| || |||||||||| || ||||| Sbjct: 1425 ctcgtcgtcgtcctcgtcctcgtcgtcggccgcgccgcccccggc 1469
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 gcggccgcgcctcctccggcg 121 ||||||||||||||||||||| Sbjct: 252981 gcggccgcgcctcctccggcg 252961
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 tcctccggcgccgccgtcacc 132 ||||||||||||||||||||| Sbjct: 330089 tcctccggcgccgccgtcacc 330109
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 tcctccggcgccgccgtcacc 132 ||||||||||||||||||||| Sbjct: 137801 tcctccggcgccgccgtcacc 137821
>gb|AY708393.1| Mycobacterium tuberculosis strain Erdman PE_PGRS 33 gene, complete cds Length = 1506 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 tcctccggcgccgccgtcacc 132 ||||||||||||||||||||| Sbjct: 1338 tcctccggcgccgccgtcacc 1318
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 gtcctcgccggcggccgcgcc 111 ||||||||||||||||||||| Sbjct: 212522 gtcctcgccggcggccgcgcc 212502
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccgtcacc 132 ||||||||||| ||||||||||||| Sbjct: 7318715 cgcctcctccgtcgccgccgtcacc 7318739
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 cgcctcctccggcgccgccgtcacc 132 ||||||||||| ||||||||||||| Sbjct: 6558334 cgcctcctccgtcgccgccgtcacc 6558310
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 ccgcgcctcctccggcgccgccgtc 129 |||||||||||||| |||||||||| Sbjct: 834828 ccgcgcctcctccgccgccgccgtc 834804
>gb|AF049910.1|AF049910 Homo sapiens TACC1 (TACC1) mRNA, complete cds Length = 7758 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 cctcgtcctcgccggcggccgcgcc 111 |||||||||||||||||||| |||| Sbjct: 414 cctcgtcctcgccggcggccccgcc 390
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 ccgcgcctcctccggcgccgccgtc 129 |||||||||||||| |||||||||| Sbjct: 117962 ccgcgcctcctccgccgccgccgtc 117938
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 ccgcgcctcctccggcgccgccgtc 129 |||||||||||||| |||||||||| Sbjct: 15723 ccgcgcctcctccgccgccgccgtc 15699
>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0062A09 Length = 173541 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccgtcacc 132 ||||||||||| ||||||||||||| Sbjct: 52678 cgcctcctccgtcgccgccgtcacc 52702
>dbj|AP005494.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086M15 Length = 153491 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 cgcctcctccggcgccgccgtcacc 132 ||||||||||| ||||||||||||| Sbjct: 139809 cgcctcctccgtcgccgccgtcacc 139785
>emb|AJ331722.1|HSA331722 Homo sapiens genomic sequence surrounding NotI site, clone NR5-GA6R Length = 756 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 cctcgtcctcgccggcggccgcgcc 111 |||||||||||||||||||| |||| Sbjct: 319 cctcgtcctcgccggcggccccgcc 295
>dbj|AK067972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P12, full insert sequence Length = 1376 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 ccgcgcctcctccggcgccgccgtc 129 |||||||||||||| |||||||||| Sbjct: 201 ccgcgcctcctccgccgccgccgtc 177
>gb|AC067817.10| Homo sapiens chromosome 8, clone RP11-723D22, complete sequence Length = 172678 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 cctcgtcctcgccggcggccgcgcc 111 |||||||||||||||||||| |||| Sbjct: 42032 cctcgtcctcgccggcggccccgcc 42008
>ref|NM_188267.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cctcctccggcgccgccgtc 129 |||||||||||||||||||| Sbjct: 40 cctcctccggcgccgccgtc 21
>ref|NM_022474.2| Homo sapiens membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) (MPP5), mRNA Length = 5375 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcctcctccggcgccgccgtcacc 132 |||||||||| ||||||||||||| Sbjct: 72 gcctcctccgtcgccgccgtcacc 49
>ref|XM_514207.1| PREDICTED: Pan troglodytes similar to 3(2),5-bisphosphate nucleotidase 1 (Bisphosphate 3-nucleotidase 1) (PAP-inositol-1,4-phosphatase) (PIP) (LOC457747), mRNA Length = 1091 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gagtaggaggagcaggaaat 38 |||||||||||||||||||| Sbjct: 782 gagtaggaggagcaggaaat 801
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tcctcgtcctcgccggcggc 105 |||||||||||||||||||| Sbjct: 1149420 tcctcgtcctcgccggcggc 1149439
>gb|BC065546.1| Homo sapiens family with sequence similarity 44, member A, mRNA (cDNA clone IMAGE:6047217), partial cds Length = 1081 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 92 cgcctcctccggcgccgccg 111
>gb|AC132345.4| Mus musculus BAC clone RP24-177P9 from chromosome 9, complete sequence Length = 183638 Score = 40.1 bits (20), Expect = 3.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 tgcgaggagggggcctgagtaggaggag 30 ||||||||||||||| |||| ||||||| Sbjct: 49540 tgcgaggagggggccagagtgggaggag 49567
>gb|AC134569.4| Mus musculus BAC clone RP24-240H21 from chromosome 16, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acctggcgccccggcgacgt 149 |||||||||||||||||||| Sbjct: 150556 acctggcgccccggcgacgt 150537
>ref|NM_006085.3| Homo sapiens 3'(2'), 5'-bisphosphate nucleotidase 1 (BPNT1), mRNA Length = 2451 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gagtaggaggagcaggaaat 38 |||||||||||||||||||| Sbjct: 815 gagtaggaggagcaggaaat 834
>ref|NM_178566.2| Homo sapiens zinc finger, DHHC-type containing 21 (ZDHHC21), mRNA Length = 3267 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 167 cgcctcctccggcgccgccg 148
>emb|AJ249339.1|HSA249339 Homo sapiens mRNA for PAP-inositol-1,4-phosphatase (PIP gene) Length = 1315 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gagtaggaggagcaggaaat 38 |||||||||||||||||||| Sbjct: 791 gagtaggaggagcaggaaat 810
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cctcctccggcgccgccgtc 129 |||||||||||||||||||| Sbjct: 307772 cctcctccggcgccgccgtc 307791
>gb|BC043603.1| Homo sapiens family with sequence similarity 44, member A, mRNA (cDNA clone IMAGE:5503684), with apparent retained intron Length = 4394 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 140 cgcctcctccggcgccgccg 159
>emb|AL390732.10| Human DNA sequence from clone RP11-439N12 on chromosome 9 Contains a novel gene similar to mouse 9130404H11Rik protein, the CER1 gene for cerberus 1 homolog, cysteine knot superfamily (Xenopus laevis) and the 3' end of a novel gene (FLJ25416), complete sequence Length = 143246 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 96652 cgcctcctccggcgccgccg 96671
>emb|BX034712.1|CNS08YY4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA50DA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 958 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 tcctcgtcctcgccggcggccgcg 109 ||||| |||||||||||||||||| Sbjct: 138 tcctcctcctcgccggcggccgcg 161
>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0099J16, complete sequence Length = 133198 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cctcgtcctcgccggcggccgcgc 110 ||||||||||||||||||| |||| Sbjct: 95336 cctcgtcctcgccggcggcggcgc 95359
>emb|BX008235.1|CNS08EIN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13CD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1012 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 tcctcgtcctcgccggcggccgcg 109 ||||| |||||||||||||||||| Sbjct: 146 tcctcctcctcgccggcggccgcg 169
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gtcctcgccggcggccgcgc 110 |||||||||||||||||||| Sbjct: 36278 gtcctcgccggcggccgcgc 36259
>gb|BC095485.1| Homo sapiens membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5), mRNA (cDNA clone MGC:111529 IMAGE:30520451), complete cds Length = 3812 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcctcctccggcgccgccgtcacc 132 |||||||||| ||||||||||||| Sbjct: 267 gcctcctccgtcgccgccgtcacc 244
>gb|BC042558.1| Homo sapiens zinc finger, DHHC-type containing 21, mRNA (cDNA clone MGC:42917 IMAGE:4837003), complete cds Length = 3267 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 167 cgcctcctccggcgccgccg 148
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgaggcgctcgccctggtgc 70 |||||||||||||||||||| Sbjct: 24314 cgaggcgctcgccctggtgc 24295
>gb|AF228661.4| Homo sapiens chromosome 8 clone CTD-3015B2 map q11-q13, complete sequence Length = 140374 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 10857 tcgtcctcgccggcggccgc 10838
>gb|AF504925.1| Homo sapiens basic helix-loop-helix protein 5 gene, complete cds Length = 6734 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 2881 tcgtcctcgccggcggccgc 2862
>emb|CR858769.1| Pongo pygmaeus mRNA; cDNA DKFZp459G097 (from clone DKFZp459G097) Length = 4425 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 49 cgcctcctccggcgccgccg 30
>gb|AF528529.1| Homo sapiens hypothetical protein mRNA, complete cds Length = 2610 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 143 cgcctcctccggcgccgccg 162
>gb|AC104939.7| Homo sapiens chromosome 8, clone CTD-3015B2, complete sequence Length = 140375 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 10631 tcgtcctcgccggcggccgc 10612
>ref|NM_152414.3| Homo sapiens basic helix-loop-helix domain containing, class B, 5 (BHLHB5), mRNA Length = 3388 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 581 tcgtcctcgccggcggccgc 562
>tpg|BK000273.1| TPA: TPA_exp: Homo sapiens class II bHLH protein BHLHB5 mRNA, complete cds Length = 1389 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 290 tcgtcctcgccggcggccgc 271
>gb|AC090136.6| Homo sapiens chromosome 8, clone RP11-21C4, complete sequence Length = 186304 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 17147 tcgtcctcgccggcggccgc 17166
>emb|CR614809.1| full-length cDNA clone CS0DM010YI02 of Fetal liver of Homo sapiens (human) Length = 1112 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 162 cgcctcctccggcgccgccg 181
>emb|CR599062.1| full-length cDNA clone CS0DL012YL07 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1125 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gagtaggaggagcaggaaat 38 |||||||||||||||||||| Sbjct: 790 gagtaggaggagcaggaaat 809
>dbj|AK021941.1| Homo sapiens cDNA FLJ11879 fis, clone HEMBA1007121, highly similar to Homo sapiens bisphosphate 3'-nucleotidase mRNA Length = 1861 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gagtaggaggagcaggaaat 38 |||||||||||||||||||| Sbjct: 224 gagtaggaggagcaggaaat 243
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gcggccatggacgaggcgct 59 |||||||||||||||||||| Sbjct: 283043 gcggccatggacgaggcgct 283024
>gb|AC103590.2| Homo sapiens chromosome 1 clone RP11-544K18, complete sequence Length = 213056 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 gagtaggaggagcaggaaat 38 |||||||||||||||||||| Sbjct: 115743 gagtaggaggagcaggaaat 115724
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cggcgacgtccggaaggccc 160 |||||||||||||||||||| Sbjct: 4265657 cggcgacgtccggaaggccc 4265676
>ref|NM_148894.2| Homo sapiens family with sequence similarity 44, member A (FAM44A), mRNA Length = 10542 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 143 cgcctcctccggcgccgccg 162
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 tcgccggcggccgcgcctcctccg 118 |||||||||||||| ||||||||| Sbjct: 26696994 tcgccggcggccgctcctcctccg 26697017
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cctcgtcctcgccggcggccgcgc 110 ||||||||||||||||||| |||| Sbjct: 25909630 cctcgtcctcgccggcggcggcgc 25909607
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cctcctccggcgccgccgtc 129 |||||||||||||||||||| Sbjct: 124162 cctcctccggcgccgccgtc 124143
>gb|AF215845.3| Homo sapiens chromosome 8 clone CTD-2542N7 map q11-q13, complete sequence Length = 237705 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 147686 tcgtcctcgccggcggccgc 147667
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gcgcctcctccggcgccgcc 126 |||||||||||||||||||| Sbjct: 3098703 gcgcctcctccggcgccgcc 3098722
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 gccgcgcctcctccggcgccgccg 127 ||||||||||||| |||||||||| Sbjct: 3108018 gccgcgcctcctcgggcgccgccg 3107995
>gb|BC087835.1| Homo sapiens family with sequence similarity 44, member A, mRNA (cDNA clone IMAGE:6514648), partial cds Length = 1139 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 149 cgcctcctccggcgccgccg 168
>emb|AJ005576.1|SGR005576 Streptomyces griseus minD gene Length = 2180 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 tccggcgccgccgtcacctg 134 |||||||||||||||||||| Sbjct: 1136 tccggcgccgccgtcacctg 1155
>dbj|AK098373.1| Homo sapiens cDNA FLJ25507 fis, clone CBR05244, highly similar to Mus musculus PALS1 (Pals1) mRNA Length = 1762 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 gcctcctccggcgccgccgtcacc 132 |||||||||| ||||||||||||| Sbjct: 45 gcctcctccgtcgccgccgtcacc 22
>ref|XM_321348.2| Anopheles gambiae str. PEST ENSANGP00000011582 (ENSANGG00000009093), partial mRNA Length = 1152 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 tcctcgtcctcgccggcggccgcg 109 ||||| |||||||||||||||||| Sbjct: 1121 tcctcctcctcgccggcggccgcg 1098
>dbj|AK107389.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C10, full insert sequence Length = 1494 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 tcgccggcggccgcgcctcctccg 118 |||||||||||||| ||||||||| Sbjct: 1217 tcgccggcggccgctcctcctccg 1194
>gb|AC006445.11|AC006445 Homo sapiens chromosome 4 clone C0367I21, complete sequence Length = 174547 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgcctcctccggcgccgccg 127 |||||||||||||||||||| Sbjct: 25313 cgcctcctccggcgccgccg 25332
>emb|AJ339477.1|HSA339477 Homo sapiens genomic sequence surrounding NotI site, clone NR5-HI10RS Length = 731 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ339476.1|HSA339476 Homo sapiens genomic sequence surrounding NotI site, clone NR5-HI6RS Length = 748 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ340919.1|HSA340919 Homo sapiens genomic sequence surrounding NotI site, clone NL6-GC14RS Length = 741 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ338699.1|HSA338699 Homo sapiens genomic sequence surrounding NotI site, clone NR5-GH24RS Length = 669 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ338556.1|HSA338556 Homo sapiens genomic sequence surrounding NotI site, clone NR5-GC13RS Length = 689 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ340722.1|HSA340722 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ZP12RS Length = 881 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ339061.1|HSA339061 Homo sapiens genomic sequence surrounding NotI site, clone NR5-DD14R Length = 914 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ339059.1|HSA339059 Homo sapiens genomic sequence surrounding NotI site, clone NR5-DC7R Length = 924 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ341221.1|HSA341221 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NA7RS Length = 704 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ338279.1|HSA338279 Homo sapiens genomic sequence surrounding NotI site, clone NR1-PI15RS Length = 763 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ341122.1|HSA341122 Homo sapiens genomic sequence surrounding NotI site, clone NR1-0E21RS Length = 827 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ341106.1|HSA341106 Homo sapiens genomic sequence surrounding NotI site, clone NR1-0M21RS Length = 820 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ341073.1|HSA341073 Homo sapiens genomic sequence surrounding NotI site, clone NR1-WA21RS Length = 773 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ340210.1|HSA340210 Homo sapiens genomic sequence surrounding NotI site, clone NR5-IF20RS Length = 739 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ340209.1|HSA340209 Homo sapiens genomic sequence surrounding NotI site, clone NR5-HD2RS Length = 753 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>emb|AJ340203.1|HSA340203 Homo sapiens genomic sequence surrounding NotI site, clone NR5-II8RS Length = 674 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tcgtcctcgccggcggccgc 108 |||||||||||||||||||| Sbjct: 20 tcgtcctcgccggcggccgc 1
>dbj|AK099171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088J12, full insert sequence Length = 952 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cctcctccggcgccgccgtc 129 |||||||||||||||||||| Sbjct: 107 cctcctccggcgccgccgtc 88
>gb|AF125042.1|AF125042 Homo sapiens bisphosphate 3'-nucleotidase mRNA, complete cds Length = 2113 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gagtaggaggagcaggaaat 38 |||||||||||||||||||| Sbjct: 763 gagtaggaggagcaggaaat 782
>dbj|AK060553.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B09, full insert sequence Length = 1052 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cctcctccggcgccgccgtc 129 |||||||||||||||||||| Sbjct: 189 cctcctccggcgccgccgtc 170
>emb|AL135978.4|CNS01DVN Human chromosome 14 DNA sequence BAC R-125H8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173043 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 gcctcctccggcgccgccgtcacc 132 |||||||||| ||||||||||||| Sbjct: 92580 gcctcctccgtcgccgccgtcacc 92603
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 3.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 96 cgccggcggccgcgcctcctccggcgccgccg 127 |||||||||||||||| | ||| ||||||||| Sbjct: 2267511 cgccggcggccgcgccgcgtccagcgccgccg 2267480
>gb|U97662.1|CRU97662 Chlamydomonas reinhardtii phosphatidylinositol 3-kinase mRNA, partial cds Length = 2200 Score = 40.1 bits (20), Expect = 3.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 cgccggcggccgcgcctcctccggcgccgccg 127 |||| ||||| ||||| ||||||||||||||| Sbjct: 1275 cgccagcggcggcgccgcctccggcgccgccg 1306
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cctcgtcctcgccggcggccgcgc 110 ||||||||||||||||||| |||| Sbjct: 26228328 cctcgtcctcgccggcggcggcgc 26228305
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 tcgccggcggccgcgcctcctccg 118 |||||||||||||| ||||||||| Sbjct: 26625163 tcgccggcggccgctcctcctccg 26625186
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 tcgccggcggccgcgcctcctccg 118 |||||||||||||| ||||||||| Sbjct: 74133 tcgccggcggccgctcctcctccg 74110
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 tcgccggcggccgcgcctcctccg 118 |||||||||||||| ||||||||| Sbjct: 101984 tcgccggcggccgctcctcctccg 101961
>gb|AC124180.5| Mus musculus BAC clone RP23-200I16 from 16, complete sequence Length = 199422 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acctggcgccccggcgacgt 149 |||||||||||||||||||| Sbjct: 1211 acctggcgccccggcgacgt 1192
>gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10, complete sequence Length = 107205 Score = 40.1 bits (20), Expect = 3.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 90 cgtcctcgccggcggccgcgcctcctccggcgccgc 125 |||||||||||||||| |||| ||| || ||||||| Sbjct: 11371 cgtcctcgccggcggctgcgcttccgcctgcgccgc 11336
>gb|L10064.1|STMMUTA Streptomyces cinnamonensis methylmalonyl-CoA mutase small subunit (mutA) and large subunit (mutB) genes, complete cds's Length = 5732 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tggacgaggcgctcgccctg 66 |||||||||||||||||||| Sbjct: 4279 tggacgaggcgctcgccctg 4298 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,515,139 Number of Sequences: 3902068 Number of extensions: 1515139 Number of successful extensions: 45150 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43233 Number of HSP's gapped (non-prelim): 1917 length of query: 233 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 211 effective length of database: 17,147,199,772 effective search space: 3618059151892 effective search space used: 3618059151892 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
