>LONH1_MAIZE (P93647) Lon protease homolog 1, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 885

 Score =  142 bits (357), Expect = 3e-34
 Identities = 69/77 (89%), Positives = 73/77 (94%)
 Frame = +1

Query: 52  PVELPGRLAILPFRNKVLLPGAIVRIRCTTPSSVKLVEQELWQREDKGLIGVLPVRDSEA 231
           PVELP RLA+LPFRNKVLLPGAIVRIRCT PSSVKLVEQELWQ+E+KGLIGVLPVRDSEA
Sbjct: 5   PVELPSRLAVLPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQKEEKGLIGVLPVRDSEA 64

Query: 232 AAVGSILSPGVGGDSGE 282
            AVGS+LSPGVG DSGE
Sbjct: 65  TAVGSLLSPGVGSDSGE 81

>LONH1_ARATH (O64948) Lon protease homolog 1, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 888

 Score =  120 bits (300), Expect = 1e-27
 Identities = 57/77 (74%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
 Frame = +1

Query: 55  VELPGRLAILPFRNKVLLPGAIVRIRCTTPSSVKLVEQELWQREDKGLIGVLPVR-DSEA 231
           VELP RLAILPFRNKVLLPGAI+RIRCT+ SSV LVEQELWQ+E+KGLIG+LPVR D+E 
Sbjct: 5   VELPSRLAILPFRNKVLLPGAIIRIRCTSHSSVTLVEQELWQKEEKGLIGILPVRDDAEG 64

Query: 232 AAVGSILSPGVGGDSGE 282
           +++G++++PG G DSGE
Sbjct: 65  SSIGTMINPGAGSDSGE 81

>LONH1_SPIOL (O04979) Lon protease homolog 1, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 875

 Score =  119 bits (299), Expect = 2e-27
 Identities = 60/77 (77%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
 Frame = +1

Query: 55  VELPGRLAILPFRNKVLLPGAIVRIRCTTPSSVKLVEQELWQREDKGLIGVLPVRD-SEA 231
           VELP RL IL FRNKVLLPGAI+RIRCT+PSSVKLVEQELWQRE+KGLIG++PVRD SE+
Sbjct: 5   VELPSRLGILAFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGIVPVRDASES 64

Query: 232 AAVGSILSPGVGGDSGE 282
           A+V  +L PG G DSGE
Sbjct: 65  ASVAPVLYPGGGTDSGE 81

>LON2_MYXXA (P36774) ATP-dependent protease La 2 (EC 3.4.21.53)|
          Length = 826

 Score = 32.7 bits (73), Expect = 0.24
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +1

Query: 58  ELPGRLAILPFRNKVLLPGAIVRIRCTTPSSVKLVEQELWQREDKGLIGVLPVRDSEAAA 237
           ++P  L ILP RN V  PG ++ +      ++ L++  +    D  +IGV+  R +E   
Sbjct: 27  DIPQVLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAV---RDDQVIGVVTQRRAEEED 83

Query: 238 VGS 246
            G+
Sbjct: 84  PGA 86

>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein)
          Length = 5085

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 280 PLNHRPLQATGSNQQPQPQSPAREAPQ 200
           P   +P Q T +  QPQP +PA+  PQ
Sbjct: 432 PAKPQPQQPTPAKPQPQPPTPAKPQPQ 458

>SSBW_PSEPU (Q8VMM4) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 180

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 265 PLQATGSNQQPQPQSPAREAPQ 200
           P    GSNQQP+ Q+P ++ PQ
Sbjct: 124 PYNQGGSNQQPRQQAPRQQRPQ 145

>HV1D_HUMAN (P01760) Ig heavy chain V-I region WOL|
          Length = 124

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
 Frame = +1

Query: 97  KVLLPGAIVRIRCTTPSSVKLVEQELWQRE--DKGL--IGVLPVR-DSEAAAVGSILSPG 261
           +V  PG+ VR+ C T     +  + LW R+   KGL  +G +P+R + E    GS++   
Sbjct: 10  EVKKPGSSVRVSCKTSGGTFVDYKGLWVRQAPGKGLEWVGQIPLRFNGEVKNPGSVVRVS 69

Query: 262 V 264
           V
Sbjct: 70  V 70

>MMP9_MOUSE (P41245) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB)
          Length = 730

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 284 PSPESPPTPGDRIEPTAAASESRTGS 207
           P P   P+PG    PTA +SE+ T S
Sbjct: 501 PGPTGAPSPGPTAAPTAGSSEASTES 526

>TESK1_RAT (Q63572) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 628

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
 Frame = -1

Query: 284 PSPESPPTPGD---RIEPTAAASESRTG-----STPIRP 192
           PSPESPP+ GD   R+ P +   + R G      TP +P
Sbjct: 363 PSPESPPSWGDNLTRVNPFSLREDLRGGKIKLLDTPCKP 401

>TESK1_MOUSE (O70146) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 627

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
 Frame = -1

Query: 284 PSPESPPTPGD---RIEPTAAASESRTG-----STPIRP 192
           PSPESPP+ GD   R+ P +   + R G      TP +P
Sbjct: 363 PSPESPPSWGDNLTRVNPFSLREDLRGGKIKLLDTPCKP 401

>CIC_HUMAN (Q96RK0) Protein capicua homolog|
          Length = 1608

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -1

Query: 284  PSPESPPTPGDRIEPTAAASESRTGSTPIRP 192
            P+P  P  PG   EPTA  SE     TP  P
Sbjct: 1202 PAPRQPLEPGPVREPTAPESELEGQPTPPAP 1232


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,574,094
Number of Sequences: 219361
Number of extensions: 676672
Number of successful extensions: 3149
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3133
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)