ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 0.52
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 0.52
3dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 40 0.52
4ref|XM_480307.1| Oryza sativa (japonica cultivar-group), mRNA 38 2.1
5gb|AC084864.4| Homo sapiens chromosome 7 clone RP11-738B7, compl... 38 2.1
6ref|XM_935883.1| PREDICTED: Homo sapiens hypothetical protein LO... 38 2.1
7ref|XM_943625.1| PREDICTED: Homo sapiens hypothetical protein LO... 38 2.1
8ref|XM_929958.1| PREDICTED: Homo sapiens similar to Glioma tumor... 38 2.1
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 2.1
10dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic D... 38 2.1
11ref|XM_310256.2| Anopheles gambiae str. PEST ENSANGP00000024935 ... 38 2.1
12dbj|AK101266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 2.1
13ref|NM_191160.1| Oryza sativa (japonica cultivar-group), predic... 36 8.2
14gb|BT016727.1| Zea mays clone Contig560 mRNA sequence 36 8.2
15gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 36 8.2
16ref|XM_611842.2| PREDICTED: Bos taurus similar to oxysterol-bind... 36 8.2
17ref|XM_869903.1| PREDICTED: Bos taurus similar to oxysterol-bind... 36 8.2
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 36 8.2
19emb|CR376803.19| Zebrafish DNA sequence from clone DKEY-222P3 in... 36 8.2
20emb|BX649269.11| Zebrafish DNA sequence from clone CH211-195G14 ... 36 8.2
21gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare str... 36 8.2
22gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome... 36 8.2
23emb|AL136131.15| Human DNA sequence from clone RP1-261G23 on chr... 36 8.2
24emb|Y11145.2|PLY11145 P.leniusculus mRNA for masquerade-like pro... 36 8.2
25emb|AL954246.1| Pan troglodytes chromosome 22 clone PTB-051O03 m... 36 8.2
26emb|CR559930.6| Zebrafish DNA sequence from clone CH211-186E20 i... 36 8.2
27emb|BX572637.17| Zebrafish DNA sequence from clone DKEY-17N16 in... 36 8.2
28emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in l... 36 8.2
29emb|BX323842.8| Zebrafish DNA sequence from clone CH211-1M7, com... 36 8.2
30emb|BX470086.9| Zebrafish DNA sequence from clone CH211-117C19 i... 36 8.2
31gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare str... 36 8.2
32ref|XM_685354.1| PREDICTED: Danio rerio similar to glutamate rec... 36 8.2
33dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
34dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
37gb|AC123764.18| Homo sapiens chromosome 17, clone CTC-784N20, co... 36 8.2
38dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
39dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
40dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
41dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
42dbj|BS000152.1| Pan troglodytes chromosome 22 clone:RP43-045G16,... 36 8.2
43dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
44emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein 36 8.2
45dbj|AK105426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 8.2
46dbj|AK102730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 8.2
47emb|BX284669.12| Zebrafish DNA sequence from clone CH211-280E18 ... 36 8.2
48gb|AY108511.1| Zea mays PCO079010 mRNA sequence 36 8.2
49emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in... 36 8.2
50emb|CR391917.19| Zebrafish DNA sequence from clone DKEY-97O8 in ... 36 8.2
51dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 36 8.2
52emb|AL844899.33| Zebrafish DNA sequence from clone CH211-287K8 i... 36 8.2
53gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 36 8.2
54gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 36 8.2
55emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311... 36 8.2
56emb|BX005402.7| Zebrafish DNA sequence from clone DKEY-237J11, c... 36 8.2
57gb|AC148976.3| Mus musculus BAC clone RP23-391I5 from 7, complet... 36 8.2
58emb|AM179854.1| Sorghum bicolor partial mRNA for Beta-1,2-xylosy... 36 8.2
59emb|BX000430.8| Zebrafish DNA sequence from clone DKEY-9K12, com... 36 8.2
60emb|AL935287.15| Zebrafish DNA sequence from clone CH211-280O3, ... 36 8.2
61gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) 36 8.2 
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 0.52
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 23      cgctctgcacgccgccggcc 42
               ||||||||||||||||||||
Sbjct: 2438758 cgctctgcacgccgccggcc 2438739
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 0.52
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       cgctctgcacgccgccggcc 42
                ||||||||||||||||||||
Sbjct: 24512550 cgctctgcacgccgccggcc 24512569



 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 8        cagcctccgcgcctccgc 25
                ||||||||||||||||||
Sbjct: 29186582 cagcctccgcgcctccgc 29186565
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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0012B02
          Length = 149807

 Score = 40.1 bits (20), Expect = 0.52
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     cgctctgcacgccgccggcc 42
              ||||||||||||||||||||
Sbjct: 124023 cgctctgcacgccgccggcc 124042
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>ref|XM_480307.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1927

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 ctccgcgcctccgctctgc 30
          |||||||||||||||||||
Sbjct: 18 ctccgcgcctccgctctgc 36
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>gb|AC084864.4| Homo sapiens chromosome 7 clone RP11-738B7, complete sequence
          Length = 176562

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    ctctgcacgccgccggccc 43
             |||||||||||||||||||
Sbjct: 76883 ctctgcacgccgccggccc 76901
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>ref|XM_935883.1| PREDICTED: Homo sapiens hypothetical protein LOC641820 (LOC641820),
            mRNA
          Length = 1404

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 25   ctctgcacgccgccggccc 43
            |||||||||||||||||||
Sbjct: 1178 ctctgcacgccgccggccc 1196
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>ref|XM_943625.1| PREDICTED: Homo sapiens hypothetical protein LOC649219 (LOC649219),
            mRNA
          Length = 1404

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 25   ctctgcacgccgccggccc 43
            |||||||||||||||||||
Sbjct: 1178 ctctgcacgccgccggccc 1196
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>ref|XM_929958.1| PREDICTED: Homo sapiens similar to Glioma tumor suppressor candidate
            region gene 1 protein (LOC646987), mRNA
          Length = 1299

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 25   ctctgcacgccgccggccc 43
            |||||||||||||||||||
Sbjct: 1073 ctctgcacgccgccggccc 1091
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 12      ctccgcgcctccgctctgc 30
               |||||||||||||||||||
Sbjct: 4230692 ctccgcgcctccgctctgc 4230710



 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 25       ctctgcacgccgccggcc 42
                ||||||||||||||||||
Sbjct: 10838571 ctctgcacgccgccggcc 10838588
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>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1590_E05
          Length = 148205

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     ctccgcgcctccgctctgc 30
              |||||||||||||||||||
Sbjct: 130315 ctccgcgcctccgctctgc 130333
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>ref|XM_310256.2| Anopheles gambiae str. PEST ENSANGP00000024935
           (ENSANGG00000021154), partial mRNA
          Length = 702

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 17  cgcctccgctctgcacgccgccg 39
           ||||||||||||||| |||||||
Sbjct: 124 cgcctccgctctgcaagccgccg 102
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>dbj|AK101266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032L11,
          full insert sequence
          Length = 1922

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 ctccgcgcctccgctctgc 30
          |||||||||||||||||||
Sbjct: 18 ctccgcgcctccgctctgc 36
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>ref|NM_191160.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 537

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 22  ccgctctgcacgccgccggccc 43
           ||||| ||||||||||||||||
Sbjct: 271 ccgctttgcacgccgccggccc 292
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>gb|BT016727.1| Zea mays clone Contig560 mRNA sequence
          Length = 1617

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 19  cctccgctctgcacgccg 36
           ||||||||||||||||||
Sbjct: 186 cctccgctctgcacgccg 203
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      cctgcagcctccgcgcct 21
              ||||||||||||||||||
Sbjct: 952375 cctgcagcctccgcgcct 952392
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>ref|XM_611842.2| PREDICTED: Bos taurus similar to oxysterol-binding protein-like
            protein 5 isoform b, transcript variant 1 (LOC532690),
            mRNA
          Length = 3193

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 2    cacctgcagcctccgcgcctcc 23
            ||||||||||| ||||||||||
Sbjct: 2232 cacctgcagccgccgcgcctcc 2211
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>ref|XM_869903.1| PREDICTED: Bos taurus similar to oxysterol-binding protein-like
            protein 5 isoform b, transcript variant 2 (LOC532690),
            mRNA
          Length = 3397

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 2    cacctgcagcctccgcgcctcc 23
            ||||||||||| ||||||||||
Sbjct: 2436 cacctgcagccgccgcgcctcc 2415
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 35      cgccggcccctcaacaccctcc 56
               ||||||||||||||| ||||||
Sbjct: 5821196 cgccggcccctcaacgccctcc 5821175
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>emb|CR376803.19| Zebrafish DNA sequence from clone DKEY-222P3 in linkage group 22,
             complete sequence
          Length = 108133

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    cgcctccgctctgcacgc 34
             ||||||||||||||||||
Sbjct: 47133 cgcctccgctctgcacgc 47150
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>emb|BX649269.11| Zebrafish DNA sequence from clone CH211-195G14 in linkage group 13,
            complete sequence
          Length = 141533

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 17   cgcctccgctctgcacgc 34
            ||||||||||||||||||
Sbjct: 1703 cgcctccgctctgcacgc 1720
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>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0021B21, from chromosome 3, complete sequence
          Length = 139208

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 35    cgccggcccctcaacaccctcc 56
             ||||||||||||||| ||||||
Sbjct: 50026 cgccggcccctcaacgccctcc 50005
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>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0017B18, complete sequence
          Length = 150279

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     cagcctccgcgcctccgc 25
             ||||||||||||||||||
Sbjct: 25846 cagcctccgcgcctccgc 25829
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>emb|AL136131.15| Human DNA sequence from clone RP1-261G23 on chromosome 6p12.2-21.1
             Contains the KIAA0110 gene, the FLJ30845 gene, the MRPS18A
             gene for mitochondrial ribosomal protein S18A, a
             pseudogene similar to OPA-interacting protein (OIP21) a
             novel gene, the VEGF gene for vascular endothelial growth
             factor and two CpG islands, complete sequence
          Length = 172033

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 40    gcccctcaacaccctcca 57
             ||||||||||||||||||
Sbjct: 90659 gcccctcaacaccctcca 90642
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>emb|Y11145.2|PLY11145 P.leniusculus mRNA for masquerade-like protein
          Length = 3277

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 27   ctgcacgccgccggcccc 44
            ||||||||||||||||||
Sbjct: 1577 ctgcacgccgccggcccc 1594
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>emb|AL954246.1| Pan troglodytes chromosome 22 clone PTB-051O03 map 22q22.3, complete
              sequence
          Length = 160361

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                        
Query: 18     gcctccgctctgcacgccgccggccc 43
              |||||||| ||||||||||| |||||
Sbjct: 136726 gcctccgccctgcacgccgcgggccc 136701
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>emb|CR559930.6| Zebrafish DNA sequence from clone CH211-186E20 in linkage group 5,
             complete sequence
          Length = 151158

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 17    cgcctccgctctgcacgc 34
             ||||||||||||||||||
Sbjct: 62915 cgcctccgctctgcacgc 62898
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>emb|BX572637.17| Zebrafish DNA sequence from clone DKEY-17N16 in linkage group 11,
              complete sequence
          Length = 158265

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     cgcctccgctctgcacgc 34
              ||||||||||||||||||
Sbjct: 110455 cgcctccgctctgcacgc 110472
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>emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in linkage group 22,
             complete sequence
          Length = 183230

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 17    cgcctccgctctgcacgc 34
             ||||||||||||||||||
Sbjct: 52145 cgcctccgctctgcacgc 52128
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>emb|BX323842.8| Zebrafish DNA sequence from clone CH211-1M7, complete sequence
          Length = 162929

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     cgcctccgctctgcacgc 34
              ||||||||||||||||||
Sbjct: 162632 cgcctccgctctgcacgc 162649
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>emb|BX470086.9| Zebrafish DNA sequence from clone CH211-117C19 in linkage group 5,
             complete sequence
          Length = 190665

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    cgcctccgctctgcacgc 34
             ||||||||||||||||||
Sbjct: 76592 cgcctccgctctgcacgc 76609
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>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 35   cgccggcccctcaacaccctcc 56
            ||||||||||||||| ||||||
Sbjct: 9975 cgccggcccctcaacgccctcc 9996
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>ref|XM_685354.1| PREDICTED: Danio rerio similar to glutamate receptor, metabotropic 1
            (LOC561957), mRNA
          Length = 2499

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 17   cgcctccgctctgcacgc 34
            ||||||||||||||||||
Sbjct: 1053 cgcctccgctctgcacgc 1070
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 8       cagcctccgcgcctccgc 25
               ||||||||||||||||||
Sbjct: 1052041 cagcctccgcgcctccgc 1052024
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 8       cagcctccgcgcctccgc 25
               ||||||||||||||||||
Sbjct: 1130040 cagcctccgcgcctccgc 1130023
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 35      cgccggcccctcaacaccctcc 56
               ||||||||||||||| ||||||
Sbjct: 5820409 cgccggcccctcaacgccctcc 5820388
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                      
Query: 22       ccgctctgcacgccgccggccc 43
                ||||| ||||||||||||||||
Sbjct: 31052889 ccgctttgcacgccgccggccc 31052910



 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                      
Query: 4        cctgcagcctccgcgcctccgc 25
                ||||||||||||||||| ||||
Sbjct: 20245096 cctgcagcctccgcgccaccgc 20245117
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>gb|AC123764.18| Homo sapiens chromosome 17, clone CTC-784N20, complete sequence
          Length = 144000

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 4     cctgcagcctccgcgcct 21
             ||||||||||||||||||
Sbjct: 60247 cctgcagcctccgcgcct 60230
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>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0051H17
          Length = 187471

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 4      cctgcagcctccgcgcctccgc 25
              ||||||||||||||||| ||||
Sbjct: 151474 cctgcagcctccgcgccaccgc 151495
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>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0026J14
          Length = 163496

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 4     cctgcagcctccgcgcctccgc 25
             ||||||||||||||||| ||||
Sbjct: 11129 cctgcagcctccgcgccaccgc 11150
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>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0439E07
          Length = 176486

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 22     ccgctctgcacgccgccggccc 43
              ||||| ||||||||||||||||
Sbjct: 109868 ccgctttgcacgccgccggccc 109889
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>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1215_E11
          Length = 105301

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     cagcctccgcgcctccgc 25
             ||||||||||||||||||
Sbjct: 53869 cagcctccgcgcctccgc 53852
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>dbj|BS000152.1| Pan troglodytes chromosome 22 clone:RP43-045G16, map 22, complete
              sequences
          Length = 172551

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                        
Query: 18     gcctccgctctgcacgccgccggccc 43
              |||||||| ||||||||||| |||||
Sbjct: 151249 gcctccgccctgcacgccgcgggccc 151224
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>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0026A08
          Length = 171272

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 25    ctctgcacgccgccggcc 42
             ||||||||||||||||||
Sbjct: 52356 ctctgcacgccgccggcc 52373
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>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein
          Length = 3176

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 17  cgcctccgctctgcacgccgcc 38
           ||||||||||| ||||||||||
Sbjct: 457 cgcctccgctccgcacgccgcc 478
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>dbj|AK105426.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C11, full
            insert sequence
          Length = 2895

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 8    cagcctccgcgcctccgc 25
            ||||||||||||||||||
Sbjct: 2171 cagcctccgcgcctccgc 2154
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>dbj|AK102730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P14, full
            insert sequence
          Length = 2834

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 8    cagcctccgcgcctccgc 25
            ||||||||||||||||||
Sbjct: 2162 cagcctccgcgcctccgc 2145
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>emb|BX284669.12| Zebrafish DNA sequence from clone CH211-280E18 in linkage group 20,
             complete sequence
          Length = 153189

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    cgcctccgctctgcacgc 34
             ||||||||||||||||||
Sbjct: 57616 cgcctccgctctgcacgc 57633
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>gb|AY108511.1| Zea mays PCO079010 mRNA sequence
          Length = 1714

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 19  cctccgctctgcacgccg 36
           ||||||||||||||||||
Sbjct: 200 cctccgctctgcacgccg 217
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>emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in linkage group 14,
             complete sequence
          Length = 211706

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    cgcctccgctctgcacgc 34
             ||||||||||||||||||
Sbjct: 66846 cgcctccgctctgcacgc 66863
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>emb|CR391917.19| Zebrafish DNA sequence from clone DKEY-97O8 in linkage group 1, complete
              sequence
          Length = 184212

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     cgcctccgctctgcacgc 34
              ||||||||||||||||||
Sbjct: 101226 cgcctccgctctgcacgc 101243
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>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 27     ctgcacgccgccggcccc 44
              ||||||||||||||||||
Sbjct: 208996 ctgcacgccgccggcccc 208979



 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 27   ctgcacgccgccggcccc 44
            ||||||||||||||||||
Sbjct: 1619 ctgcacgccgccggcccc 1636
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>emb|AL844899.33| Zebrafish DNA sequence from clone CH211-287K8 in linkage group 5,
              complete sequence
          Length = 167857

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     cgcctccgctctgcacgc 34
              ||||||||||||||||||
Sbjct: 121864 cgcctccgctctgcacgc 121881
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 8       cagcctccgcgcctccgc 25
               ||||||||||||||||||
Sbjct: 1127761 cagcctccgcgcctccgc 1127744
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 8       cagcctccgcgcctccgc 25
               ||||||||||||||||||
Sbjct: 1052041 cagcctccgcgcctccgc 1052024
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>emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 97056

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     cagcctccgcgcctccgc 25
             ||||||||||||||||||
Sbjct: 47312 cagcctccgcgcctccgc 47295
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>emb|BX005402.7| Zebrafish DNA sequence from clone DKEY-237J11, complete sequence
          Length = 148726

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    cgcctccgctctgcacgc 34
             ||||||||||||||||||
Sbjct: 73277 cgcctccgctctgcacgc 73294
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>gb|AC148976.3| Mus musculus BAC clone RP23-391I5 from 7, complete sequence
          Length = 199824

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 30    cacgccgccggcccctca 47
             ||||||||||||||||||
Sbjct: 63394 cacgccgccggcccctca 63411
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>emb|AM179854.1| Sorghum bicolor partial mRNA for Beta-1,2-xylosyltransferase (xt1
           gene)
          Length = 1369

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 32  cgccgccggcccctcaac 49
           ||||||||||||||||||
Sbjct: 363 cgccgccggcccctcaac 346
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>emb|BX000430.8| Zebrafish DNA sequence from clone DKEY-9K12, complete sequence
          Length = 181640

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 17     cgcctccgctctgcacgc 34
              ||||||||||||||||||
Sbjct: 100313 cgcctccgctctgcacgc 100296
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>emb|AL935287.15| Zebrafish DNA sequence from clone CH211-280O3, complete sequence
          Length = 174293

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 17     cgcctccgctctgcacgc 34
              ||||||||||||||||||
Sbjct: 168370 cgcctccgctctgcacgc 168353
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>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP)
          Length = 1251

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 17  cgcctccgctctgcacgccgcc 38
           ||||||||||| ||||||||||
Sbjct: 247 cgcctccgctccgcacgccgcc 268


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 462,951
Number of Sequences: 3902068
Number of extensions: 462951
Number of successful extensions: 38548
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38209
Number of HSP's gapped (non-prelim): 339
length of query: 58
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 37
effective length of database: 17,151,101,840
effective search space: 634590768080
effective search space used: 634590768080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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