Clone Information

BLAST Search Result

Clone Name	bastl06g05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related pr...	97	2e-20
2	DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related pr...	96	3e-20
3	MSP1_SCHPO (P87320) Protein msp1, mitochondrial precursor	42	7e-04
4	MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Conta...	40	0.003
5	DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-...	39	0.006
6	DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynami...	39	0.006
7	DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynami...	39	0.007
8	DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like pr...	38	0.010
9	DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)	37	0.022
10	DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like pr...	37	0.028
11	DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like pr...	36	0.037
12	DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like pr...	36	0.048
13	DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like pr...	36	0.048
14	DNM1_YEAST (P54861) Dynamin-related protein DNM1 (EC 3.6.5.5)	35	0.063
15	VPS1_YEAST (P21576) Vacuolar sorting protein 1	35	0.082
16	DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like pr...	35	0.082
17	DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like pr...	34	0.18
18	YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08	34	0.18
19	DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)	33	0.31
20	DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (...	33	0.31
21	DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular)...	33	0.31
22	DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain)...	33	0.31
23	DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)	33	0.31
24	SPN1_SCHPO (O36023) Septin homolog spn1	33	0.41
25	DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)	33	0.41
26	DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)	33	0.41
27	DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)	33	0.41
28	DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)	32	0.53
29	DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)	32	0.53
30	VPS1_SCHPO (Q9URZ5) Vacuolar sorting protein 1	32	0.70
31	MX2_HUMAN (P20592) Interferon-induced GTP-binding protein Mx2 (I...	30	2.7
32	MX2_MOUSE (Q9WVP9) Interferon-induced GTP-binding protein Mx2	30	2.7
33	MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (E...	30	2.7
34	MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 ...	30	2.7
35	YJDA_ECOLI (P16694) Hypothetical protein yjdA	30	2.7
36	MX1_CANFA (Q9N0Y3) Interferon-induced GTP-binding protein Mx1	30	2.7
37	MX1_MOUSE (P09922) Interferon-induced GTP-binding protein Mx1 (I...	30	2.7
38	MX2_CANFA (Q9N0Y2) Interferon-induced GTP-binding protein Mx2	30	2.7
39	MX3_RAT (P18590) Interferon-induced GTP-binding protein Mx3	30	2.7
40	MX2_RAT (P18589) Interferon-induced GTP-binding protein Mx2	30	2.7
41	ENGA_RHILO (Q986D9) GTP-binding protein engA	30	2.7
42	MX1_RAT (P18588) Interferon-induced GTP-binding protein Mx1	30	2.7
43	MX1_PIG (P27594) Interferon-induced GTP-binding protein Mx1	30	2.7
44	MX1_HUMAN (P20591) Interferon-induced GTP-binding protein Mx1 (I...	30	2.7
45	MX1_SHEEP (P33237) Interferon-induced GTP-binding protein Mx1	30	3.5
46	MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (E...	30	3.5
47	GIMA5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-asso...	30	3.5
48	MX1_BOVIN (P79135) Interferon-induced GTP-binding protein Mx1	30	3.5
49	ENGC_LEPIN (Q8EZ61) Probable GTPase engC (EC 3.6.1.-)	29	4.5
50	ENGC_LEPIC (Q72MK0) Probable GTPase engC (EC 3.6.1.-)	29	4.5
51	CEA_CITFR (P04480) Colicin-A	29	4.5
52	ENGA_BRAJA (Q89MZ0) GTP-binding protein engA	29	4.5
53	Y053_METJA (Q60360) Hypothetical protein MJ0053	29	5.9
54	ENGC2_LISIN (Q92C22) Probable GTPase engC 2 (EC 3.6.1.-)	29	5.9
55	MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (E...	29	5.9
56	ERA_BORBU (O51604) GTP-binding protein era homolog	29	5.9
57	GIMA7_HUMAN (Q8NHV1) GTPase, IMAP family member 7 (Immunity-asso...	28	7.7

>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 48/80 (60%), Positives = 57/80 (71%)
 Frame = +1

Query: 205 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 384
           MEA++ELSQLS+S++Q                    TFLN V LGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMKQAASLLADEDPDETSSSKRPATFLNVVALGNVGAGKSAVLNSLIG 60

Query: 385 HPVLPTXENGATRAPIVVDL 444
           HPVLPT ENGATRAPI+++L
Sbjct: 61  HPVLPTGENGATRAPIIIEL 80

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>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 56/80 (70%)
 Frame = +1

Query: 205 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 384
           MEA++ELSQLS+S+RQ                    T LN V LGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMRQAASLLADEDPDETSSSRRPATSLNVVALGNVGAGKSAVLNSLIG 60

Query: 385 HPVLPTXENGATRAPIVVDL 444
           HPVLPT ENGATRAPI++DL
Sbjct: 61  HPVLPTGENGATRAPIIIDL 80

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>MSP1_SCHPO (P87320) Protein msp1, mitochondrial precursor|
          Length = 903

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +1

Query: 313 TFLNAVVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           T  + VV+G+  SGKS+VL +++GH  LP   N  TR PI + L
Sbjct: 262 TLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIELTL 305

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>MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Contains: Protein|
           MGM1 isoform 1; Protein MGM1 isoform 2]
          Length = 881

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = +1

Query: 313 TFLNAVVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           T  + VV+G+  SGKS+VL S++G   LP   N  TR PI + L
Sbjct: 209 TLPSIVVIGSQSSGKSSVLESIVGREFLPKGSNMVTRRPIELTL 252

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>DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
          Length = 755

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +1

Query: 328 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           VV+G   SGKS+VL SL+G  +LP      TR P+++ L
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQL 67

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>DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-related|
           protein 1) (Dynamin family member proline-rich
           carboxyl-terminal domain less) (Dymple)
          Length = 742

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +1

Query: 328 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           VV+G   SGKS+VL SL+G  +LP      TR P+++ L
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQL 67

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>DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
           (Dnm1p/Vps1p-like protein) (DVLP) (Dynamin family member
           proline-rich carboxyl-terminal domain less) (Dymple)
           (Dynamin-related protein 1) (Dynamin-like protein 4)
           (Dynamin-li
          Length = 736

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +1

Query: 328 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           VV+G   SGKS+VL SL+G  +LP      TR P+++ L
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQL 67

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>DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like protein 2)|
           (Dynamin-like protein 2a)
          Length = 808

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +1

Query: 328 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           VV+G+  SGKS+VL +L+G   LP   +  TR P+V+ L
Sbjct: 63  VVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVLQL 101

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>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)|
          Length = 691

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   SGKS+VL SL+G  +LP      TR P+++ L
Sbjct: 30  VVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQL 67

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>DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like protein D)|
           (Dynamin-like protein DLP3)
          Length = 612

 Score = 36.6 bits (83), Expect = 0.028
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 322 NAVVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           +  V+G   SGKS+VL S++G   LP      TR P+V+ L
Sbjct: 37  SVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQL 77

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>DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like protein E)|
           (Dynamin-like protein 4) (Dynamin-like protein DLP2)
          Length = 624

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   SGKS+VL S++G   LP      TR P+V+ L
Sbjct: 45  VVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQL 82

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>DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like protein A)|
           (Dynamin-like protein 1)
          Length = 610

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   SGKS+VL S++G   LP      TR P+V+ L
Sbjct: 39  VVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQL 76

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>DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like protein C)|
           (Dynamin-like protein 5) (Dynamin-like protein DLP1)
          Length = 614

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   SGKS+VL S++G   LP      TR P+V+ L
Sbjct: 40  VVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQL 77

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>DNM1_YEAST (P54861) Dynamin-related protein DNM1 (EC 3.6.5.5)|
          Length = 757

 Score = 35.4 bits (80), Expect = 0.063
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS++L +L+G   LP      TR P+V+ L
Sbjct: 33  VVGSQSSGKSSILETLVGRDFLPRGTGIVTRRPLVLQL 70

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>VPS1_YEAST (P21576) Vacuolar sorting protein 1|
          Length = 704

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +++G   LP      TR P+V+ L
Sbjct: 34  VVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQL 71

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>DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like protein B)|
          Length = 610

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   SGKS+VL S++G   LP      TR P+V+ L
Sbjct: 39  VVGGQSSGKSSVLESVVGKDFLPRGAGIVTRRPLVLQL 76

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>DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like protein 2b)|
          Length = 780

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L+G   LP   +  TR P+ + L
Sbjct: 48  VVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLRLQL 85

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>YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08|
          Length = 781

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 328 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           VV+G+   GKS+VL +++G   LP      TR P+++ L
Sbjct: 30  VVVGSQSCGKSSVLENIVGKDFLPRGTGIVTRRPLILQL 68

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>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 848

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 859

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)|
          Length = 851

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)|
          Length = 867

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>SPN1_SCHPO (O36023) Septin homolog spn1|
          Length = 469

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 322 NAVVLGNVGSGKSAVLNSLIGHPVLPTXENGAT 420
           N +VLG  GSGKS ++N+L+   V P  +   T
Sbjct: 97  NVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLT 129

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>DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQL 73

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>DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)|
          Length = 870

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQL 73

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>DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQL 73

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>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)|
          Length = 877

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 31  VVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQL 68

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>DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)|
          Length = 830

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 38  VVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQL 75

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>VPS1_SCHPO (Q9URZ5) Vacuolar sorting protein 1|
          Length = 678

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+ +  SGKS+VL +++G   LP      TR P+V+ L
Sbjct: 32  VVRSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQL 69

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>MX2_HUMAN (P20592) Interferon-induced GTP-binding protein Mx2|
           (Interferon-regulated resistance GTP-binding protein
           MxB) (p78-related protein)
          Length = 715

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 123 VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 159

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>MX2_MOUSE (Q9WVP9) Interferon-induced GTP-binding protein Mx2|
          Length = 655

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 68  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 104

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>MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 8)
           (ATP-energized glutathione S-conjugate pump 8)
          Length = 1466

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +1

Query: 319 LNAVVLGNVGSGKSAVLNSLIG 384
           +N  + G VGSGKS++L+S++G
Sbjct: 630 MNVAICGTVGSGKSSLLSSILG 651

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>MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 11)
           (ATP-energized glutathione S-conjugate pump 11)
          Length = 1194

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIG 384
           V+G VGSGK+++LNSL+G
Sbjct: 384 VIGEVGSGKTSLLNSLLG 401

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>YJDA_ECOLI (P16694) Hypothetical protein yjdA|
          Length = 742

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVV 438
           ++G + +GKS  +N+++G  VLP      T  P ++
Sbjct: 74  IVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLI 109

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>MX1_CANFA (Q9N0Y3) Interferon-induced GTP-binding protein Mx1|
          Length = 657

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 71  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 107

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>MX1_MOUSE (P09922) Interferon-induced GTP-binding protein Mx1 (Influenza|
           resistance protein)
          Length = 631

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 41  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 77

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>MX2_CANFA (Q9N0Y2) Interferon-induced GTP-binding protein Mx2|
          Length = 711

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 123 VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 159

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>MX3_RAT (P18590) Interferon-induced GTP-binding protein Mx3|
          Length = 659

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 73  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 109

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>MX2_RAT (P18589) Interferon-induced GTP-binding protein Mx2|
          Length = 659

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 73  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 109

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>ENGA_RHILO (Q986D9) GTP-binding protein engA|
          Length = 479

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 319 LNAVVLGNVGSGKSAVLNSLIGHPVLPTX-ENGATRAPIVVD 441
           +   V+G   +GKS ++N+LIG   L T  E G TR  I VD
Sbjct: 208 MRIAVVGRPNAGKSTLINALIGEERLLTGPEAGITRDSISVD 249

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>MX1_RAT (P18588) Interferon-induced GTP-binding protein Mx1|
          Length = 652

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 66  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 102

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>MX1_PIG (P27594) Interferon-induced GTP-binding protein Mx1|
          Length = 663

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 75  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 111

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>MX1_HUMAN (P20591) Interferon-induced GTP-binding protein Mx1|
           (Interferon-regulated resistance GTP-binding protein
           MxA) (Interferon-induced protein p78) (IFI-78K)
          Length = 661

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 74  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKL 110

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>MX1_SHEEP (P33237) Interferon-induced GTP-binding protein Mx1|
          Length = 654

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 70  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLRL 106

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>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 7)
           (ATP-energized glutathione S-conjugate pump 7)
          Length = 1493

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +1

Query: 319 LNAVVLGNVGSGKSAVLNSLIG 384
           +N  + G VGSGKS++L+S++G
Sbjct: 653 MNIAICGTVGSGKSSLLSSILG 674

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>GIMA5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-associated|
           nucleotide 4-like 1 protein) (Immunity-associated
           protein 3) (IAN-5)
          Length = 307

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 319 LNAVVLGNVGSGKSAVLNSLIGHPV 393
           L  +++G  G GKSA  NS++G PV
Sbjct: 28  LRIILVGKTGCGKSATGNSILGQPV 52

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>MX1_BOVIN (P79135) Interferon-induced GTP-binding protein Mx1|
          Length = 648

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 444
           V+G+  SGKS+VL +L G   LP      TR P+V+ L
Sbjct: 64  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLRL 100

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>ENGC_LEPIN (Q8EZ61) Probable GTPase engC (EC 3.6.1.-)|
          Length = 359

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 334 LGNVGSGKSAVLNSLIGHPVLPTXE 408
           LG+ G+GKS ++NSL+G  +  T E
Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224

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>ENGC_LEPIC (Q72MK0) Probable GTPase engC (EC 3.6.1.-)|
          Length = 359

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 334 LGNVGSGKSAVLNSLIGHPVLPTXE 408
           LG+ G+GKS ++NSL+G  +  T E
Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224

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>CEA_CITFR (P04480) Colicin-A|
          Length = 592

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 346 GSGKSAVLNSLIGHPVLPTXENGATRAPI 432
           G G + VLNSL+ +PV P  +NG  ++P+
Sbjct: 91  GRGFTRVLNSLVNNPVSPAGQNGG-KSPV 118

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>ENGA_BRAJA (Q89MZ0) GTP-binding protein engA|
          Length = 460

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 319 LNAVVLGNVGSGKSAVLNSLIGHP-VLPTXENGATRAPIVVDL 444
           +   ++G   +GKS ++N L+G   +L + E G TR  I V++
Sbjct: 188 IRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTRDSIAVEI 230

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>Y053_METJA (Q60360) Hypothetical protein MJ0053|
          Length = 227

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 331 VLGNVGSGKSAVLNSL-IGHPVLPTXENGATRAPIVVDL 444
           + G  G GK+ +LN L   HPV+   E   TR  I+ DL
Sbjct: 15  LFGKTGCGKTEILNELKKHHPVIDIEEIARTRGSILGDL 53

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>ENGC2_LISIN (Q92C22) Probable GTPase engC 2 (EC 3.6.1.-)|
          Length = 346

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 328 VVLGNVGSGKSAVLNSLIGHPVLPTXE 408
           V+LG+ G GKS+ +NSL G  ++ T E
Sbjct: 187 VLLGSSGVGKSSFINSLAGADLMKTSE 213

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>MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 3)
           (ATP-energized glutathione S-conjugate pump 3)
          Length = 1514

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 319 LNAVVLGNVGSGKSAVLNSLIG 384
           +   V G VGSGKS++L+SL+G
Sbjct: 669 MKVAVCGTVGSGKSSLLSSLLG 690

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>ERA_BORBU (O51604) GTP-binding protein era homolog|
          Length = 290

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 325 AVVLGNVGSGKSAVLNSLIGHPV 393
           A +LG   +GKS +LNS+ GH +
Sbjct: 6   AAILGRPSTGKSTLLNSICGHKI 28

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>GIMA7_HUMAN (Q8NHV1) GTPase, IMAP family member 7 (Immunity-associated|
           nucleotide 7 protein)
          Length = 300

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 319 LNAVVLGNVGSGKSAVLNSLIGHPV 393
           L  V++G  GSGKSA  N+++G  +
Sbjct: 9   LRIVLVGKTGSGKSATANTILGEEI 33


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.131    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,645,178
Number of Sequences: 219361
Number of extensions: 245525
Number of successful extensions: 1815
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result