>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor|
          Length = 1759

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 349 GILGEEAADGLVGVHGALAQRGVDLGFRAVD 257
           G  GE  ADGL G+ GA   RG+    R V+
Sbjct: 697 GYKGERGADGLPGLPGAQGPRGIPAPLRIVN 727

>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)|
          Length = 1157

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 273 PRSTPRCASAPWTPTRPSAASSPKIP 350
           P   P   SAP  P+ PS  S+P +P
Sbjct: 691 PHPVPSAPSAPPVPSAPSVPSAPPVP 716

>NAPA_HELHP (Q7VJT5) Periplasmic nitrate reductase precursor (EC 1.7.99.4)|
          Length = 937

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +2

Query: 275 EIYAALRE--CAMDPDEAVSRLLSQDTFQEVKSKRDKKK 385
           E+Y A+ E  C M PD+A ++ L Q+    V+S+R K K
Sbjct: 845 ELYRAVPEALCYMHPDDANAQNLEQNQVVWVESRRGKVK 883

>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)|
          Length = 320

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
 Frame = +3

Query: 270 KPRSTP-----RCASAPWTPTRPSAASSPKIP 350
           +PR+ P     RC +AP TP  P+  S+P  P
Sbjct: 145 QPRAVPPAAPRRCEAAPATPGVPAGGSAPACP 176

>104K_THEAN (Q4U9M9) 104 kDa microneme-rhoptry antigen precursor (p104)|
          Length = 893

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 282 TPRCASAPWTPTRPSAASSPKIPF 353
           +PR   +P +P  P +  SPK+PF
Sbjct: 640 SPRRPESPKSPKSPKSPKSPKVPF 663


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,833,621
Number of Sequences: 219361
Number of extensions: 284801
Number of successful extensions: 1650
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)