>RPA1_TRYBB (P16355) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
          Length = 1744

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 247  IHEEDPEKDGIGGGDTRNPQRLAGSRRTGAREQC*RISADPEVAD 113
            +H +  +  GI G DT  PQR  GS  +G  +     ++D E AD
Sbjct: 1411 LHSDGTDTRGIAGSDTGGPQRRRGSVESGRGDD----ASDSEAAD 1451

>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +1

Query: 22  LGFLPRRKPERSIHEGGDRRRGAAPACRSGGRPPQDLLKSFSIAPLLLFSDSRP 183
           L  LP  KP  +I+  G+RR   +       RPP  L  S  + PLLL +   P
Sbjct: 501 LSGLPSSKPRYAINHSGERRPSISQ------RPPTRLTPSVFVPPLLLGNIENP 548

>NEB1_HUMAN (Q9ULJ8) Neurabin-1 (Neurabin-I) (Neural tissue-specific F-actin|
           binding protein I) (Protein phosphatase 1 regulatory
           subunit 9A)
          Length = 1098

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 37  RRKPERSIHEGGDRRRGAAPACRSGGRPPQD 129
           R+  ERS+HE G   R +    ++GG  PQD
Sbjct: 143 RKMFERSVHESGQNNRYSPKKEKAGGSEPQD 173

>IDI2_METKA (Q8TX99) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 365

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = +2

Query: 296 VESDLA*IVDCKAILGNQSLLAVSFFLSDPE*ELFGSRLSFKMM 427
           VES+ + + DC  I+ +++L  + F   D E ELFG RLSF ++
Sbjct: 17  VESEESPLFDCVKIV-HRALPELDFDDVDMEIELFGKRLSFPLI 59

>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)|
          Length = 174

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 34  PRRKPERSIHEGGDRRRGAAP-ACRSGGRPPQDLLKS 141
           P  KPER   +GGD+ +G  P   +  G PPQ+  KS
Sbjct: 134 PPGKPERPPPQGGDQSQGPPPHPGKPEGPPPQEGNKS 170


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,366,350
Number of Sequences: 219361
Number of extensions: 1326558
Number of successful extensions: 3881
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3877
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)