ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KLK12_HUMAN (Q9UKR0) Kallikrein-12 precursor (EC 3.4.21.-) (Kall... 32 0.57
2FA12_HUMAN (P00748) Coagulation factor XII precursor (EC 3.4.21.... 28 6.3
3GCH2_PICGU (P50139) GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cycl... 28 8.3

>KLK12_HUMAN (Q9UKR0) Kallikrein-12 precursor (EC 3.4.21.-) (Kallikrein-like|
           protein 5) (KLK-L5)
          Length = 248

 Score = 31.6 bits (70), Expect = 0.57
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 9   RLRLPLLVSSPVRPIPLPN 65
           RLRLP+ V+S V+P+PLPN
Sbjct: 113 RLRLPVRVTSSVQPLPLPN 131



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>FA12_HUMAN (P00748) Coagulation factor XII precursor (EC 3.4.21.38) (Hageman|
           factor) (HAF) [Contains: Coagulation factor XIIa heavy
           chain; Beta-factor XIIa part 1; Beta-factor XIIa part 2;
           Coagulation factor XIIa light chain]
          Length = 615

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 9   RLRLPLLVSSPVRPIPLPNQTSRSPPQ 89
           RL +PL+ + P  P P P  T+R+PPQ
Sbjct: 310 RLHVPLMPAQPAPPKPQP--TTRTPPQ 334



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>GCH2_PICGU (P50139) GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II)|
          Length = 344

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 3   THRLRLPLLVSSPVRPIPLPNQTSRSPPQV 92
           TH   +PLL S  + P  +P+QT + PP+V
Sbjct: 19  THEFTMPLL-SPTLTPSHIPSQTPQIPPEV 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,406,169
Number of Sequences: 219361
Number of extensions: 144290
Number of successful extensions: 768
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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