ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474238.1| Oryza sativa (japonica cultivar-group), predic... 347 2e-92
2dbj|AK103452.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
3dbj|AK103105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
4dbj|AB071292.1| Oryza sativa OsMP mRNA for Arabidopsis Monoptero... 347 2e-92
5emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 127 3e-26
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
7ref|NM_101840.2| Arabidopsis thaliana MP (MONOPTEROS); transcrip... 66 1e-07
8gb|BT008805.1| Arabidopsis thaliana At1g19850 gene, complete cds 66 1e-07
9gb|AF334716.1| Arabidopsis thaliana clone C00027 (h) auxin respo... 66 1e-07
10dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
11gb|BT002050.1| Arabidopsis thaliana transcription factor (At1g19... 66 1e-07
12gb|AF037229.1|AF037229 Arabidopsis thaliana transcription factor... 66 1e-07
13gb|U79557.1|U79557 Arabidopsis thaliana IAA24 (IAA24) mRNA, part... 66 1e-07
14dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response fac... 66 1e-07
15gb|DQ340259.1| Lycopersicon esculentum auxin response factor 4 (... 64 4e-07
16ref|XM_474307.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
17emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 1e-04
18dbj|AK071455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
19gb|AY105215.1| Zea mays PCO121637 mRNA sequence 56 1e-04
20emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 1e-04
21emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 1e-04
22dbj|AB071298.1| Oryza sativa OsARF8 mRNA for auxin response fact... 56 1e-04
23dbj|AK103280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
24ref|NM_123060.2| Arabidopsis thaliana ARF8 (AUXIN RESPONSE FACTO... 48 0.024
25dbj|AB024026.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.024
26gb|AF042196.1|AF042196 Arabidopsis thaliana auxin response facto... 48 0.024
27gb|AY669790.1| Arabidopsis thaliana clone C105345 ARF8 (At5g3702... 48 0.024
28ref|XM_464101.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.096
29emb|AJ234409.1|HVU234409 Hordeum vulgare partial mRNA; clone cMW... 44 0.38
30gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
33gb|AC007797.7|AC007797 Arabidopsis thaliana chromosome I BAC F6F... 42 1.5
34dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
35dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
36dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
37emb|CT572988.8| Mouse DNA sequence from clone RP23-87I2 on chrom... 42 1.5
38gb|AY902381.1| Triticum aestivum auxin response factor 2 mRNA, p... 42 1.5
39gb|AF037228.1|AF037228 Arabidopsis thaliana transcription factor... 42 1.5
40dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN... 42 1.5
41gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosom... 40 5.9
42emb|X53086.1|SMPROBAG S.marcescens proBA genes for gamma-glutamy... 40 5.9
43dbj|AP005827.1| Mus musculus genomic DNA, chromosome 16 clone:RP... 40 5.9
44gb|AC131867.4| Rattus norvegicus 1 BAC CH230-397C2 (Children's H... 40 5.9
45dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
46emb|BX005056.7| Zebrafish DNA sequence from clone CH211-77A11 in... 40 5.9
47dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
48emb|AL935204.10| Zebrafish DNA sequence from clone CH211-230K10,... 40 5.9
49dbj|D90351.1|SMAPROBA Serratia marcescens proBA operon genes for... 40 5.9
50emb|AL953895.8| Zebrafish DNA sequence from clone CH211-231M14 i... 40 5.9 
>ref|XM_474238.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2865

 Score =  347 bits (175), Expect = 2e-92
 Identities = 349/407 (85%)
 Strand = Plus / Plus

                                                                       
Query: 15  tatgcacagatgaccctgcaaccagtaaactctgaaaccgacgtgttcccgatccagtct 74
           ||||||||||||||||| || ||||||||||||||||| || || ||||| || |   ||
Sbjct: 328 tatgcacagatgacccttcagccagtaaactctgaaacggatgtattccctattccaact 387

                                                                       
Query: 75  ctcggcagctatgccaagagcaagcacccggccgagtatttctgcaagaacttgaccgcg 134
           || ||    ||| |||| |||||||||||  | || |||||||||||||| || ||||| 
Sbjct: 388 cttggtgcttataccaaaagcaagcaccccactgaatatttctgcaagaatttaaccgca 447

                                                                       
Query: 135 agcgatacgagcacgcacggcgggttctcggtgccgcgaagagccgcagagaagctgttc 194
           || |||||||| || || || || ||||||||||| ||||| || ||||||||| |||||
Sbjct: 448 agtgatacgagtacacatggtggtttctcggtgccacgaagggctgcagagaagttgttc 507

                                                                       
Query: 195 ccacagctggattactcgatgcagcctcctaaccaggagcttatcgtgcgagatttgcat 254
           ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 508 ccacaactggattactcaatgcaacctcctaaccaggagcttattgttcgagatttgcat 567

                                                                       
Query: 255 gacaacatgtggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacg 314
           || |||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 568 gataacatgtggacattccgtcacatttatcgtggacagccaaaacgacatcttctaaca 627

                                                                       
Query: 315 actggatggagtctctttgttggcgccaaacggcttacagcaggggattctgtcttgttt 374
           ||||||||||||||||||||||| || || || || | ||||||||| |||||||| |||
Sbjct: 628 actggatggagtctctttgttggggcaaagcgtctaaaagcaggggactctgtcttattt 687

                                                          
Query: 375 atcagggatgagaagtctcaactacttgtgggtgttaggcgggccac 421
           || |||||||||||||| ||||| ||| ||||||||||||| |||||
Sbjct: 688 ataagggatgagaagtcacaacttcttttgggtgttaggcgagccac 734
to top
>dbj|AK103452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129I11, full
            insert sequence
          Length = 3831

 Score =  347 bits (175), Expect = 2e-92
 Identities = 349/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 15   tatgcacagatgaccctgcaaccagtaaactctgaaaccgacgtgttcccgatccagtct 74
            ||||||||||||||||| || ||||||||||||||||| || || ||||| || |   ||
Sbjct: 868  tatgcacagatgacccttcagccagtaaactctgaaacggatgtattccctattccaact 927

                                                                        
Query: 75   ctcggcagctatgccaagagcaagcacccggccgagtatttctgcaagaacttgaccgcg 134
            || ||    ||| |||| |||||||||||  | || |||||||||||||| || ||||| 
Sbjct: 928  cttggtgcttataccaaaagcaagcaccccactgaatatttctgcaagaatttaaccgca 987

                                                                        
Query: 135  agcgatacgagcacgcacggcgggttctcggtgccgcgaagagccgcagagaagctgttc 194
            || |||||||| || || || || ||||||||||| ||||| || ||||||||| |||||
Sbjct: 988  agtgatacgagtacacatggtggtttctcggtgccacgaagggctgcagagaagttgttc 1047

                                                                        
Query: 195  ccacagctggattactcgatgcagcctcctaaccaggagcttatcgtgcgagatttgcat 254
            ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 1048 ccacaactggattactcaatgcaacctcctaaccaggagcttattgttcgagatttgcat 1107

                                                                        
Query: 255  gacaacatgtggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacg 314
            || |||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 1108 gataacatgtggacattccgtcacatttatcgtggacagccaaaacgacatcttctaaca 1167

                                                                        
Query: 315  actggatggagtctctttgttggcgccaaacggcttacagcaggggattctgtcttgttt 374
            ||||||||||||||||||||||| || || || || | ||||||||| |||||||| |||
Sbjct: 1168 actggatggagtctctttgttggggcaaagcgtctaaaagcaggggactctgtcttattt 1227

                                                           
Query: 375  atcagggatgagaagtctcaactacttgtgggtgttaggcgggccac 421
            || |||||||||||||| ||||| ||| ||||||||||||| |||||
Sbjct: 1228 ataagggatgagaagtcacaacttcttttgggtgttaggcgagccac 1274
to top
>dbj|AK103105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118O21, full
            insert sequence
          Length = 2602

 Score =  347 bits (175), Expect = 2e-92
 Identities = 349/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 15   tatgcacagatgaccctgcaaccagtaaactctgaaaccgacgtgttcccgatccagtct 74
            ||||||||||||||||| || ||||||||||||||||| || || ||||| || |   ||
Sbjct: 721  tatgcacagatgacccttcagccagtaaactctgaaacggatgtattccctattccaact 780

                                                                        
Query: 75   ctcggcagctatgccaagagcaagcacccggccgagtatttctgcaagaacttgaccgcg 134
            || ||    ||| |||| |||||||||||  | || |||||||||||||| || ||||| 
Sbjct: 781  cttggtgcttataccaaaagcaagcaccccactgaatatttctgcaagaatttaaccgca 840

                                                                        
Query: 135  agcgatacgagcacgcacggcgggttctcggtgccgcgaagagccgcagagaagctgttc 194
            || |||||||| || || || || ||||||||||| ||||| || ||||||||| |||||
Sbjct: 841  agtgatacgagtacacatggtggtttctcggtgccacgaagggctgcagagaagttgttc 900

                                                                        
Query: 195  ccacagctggattactcgatgcagcctcctaaccaggagcttatcgtgcgagatttgcat 254
            ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 901  ccacaactggattactcaatgcaacctcctaaccaggagcttattgttcgagatttgcat 960

                                                                        
Query: 255  gacaacatgtggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacg 314
            || |||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 961  gataacatgtggacattccgtcacatttatcgtggacagccaaaacgacatcttctaaca 1020

                                                                        
Query: 315  actggatggagtctctttgttggcgccaaacggcttacagcaggggattctgtcttgttt 374
            ||||||||||||||||||||||| || || || || | ||||||||| |||||||| |||
Sbjct: 1021 actggatggagtctctttgttggggcaaagcgtctaaaagcaggggactctgtcttattt 1080

                                                           
Query: 375  atcagggatgagaagtctcaactacttgtgggtgttaggcgggccac 421
            || |||||||||||||| ||||| ||| ||||||||||||| |||||
Sbjct: 1081 ataagggatgagaagtcacaacttcttttgggtgttaggcgagccac 1127
to top
>dbj|AB071292.1| Oryza sativa OsMP mRNA for Arabidopsis Monopteros-like protein,
           complete cds
          Length = 2868

 Score =  347 bits (175), Expect = 2e-92
 Identities = 349/407 (85%)
 Strand = Plus / Plus

                                                                       
Query: 15  tatgcacagatgaccctgcaaccagtaaactctgaaaccgacgtgttcccgatccagtct 74
           ||||||||||||||||| || ||||||||||||||||| || || ||||| || |   ||
Sbjct: 328 tatgcacagatgacccttcagccagtaaactctgaaacggatgtattccctattccaact 387

                                                                       
Query: 75  ctcggcagctatgccaagagcaagcacccggccgagtatttctgcaagaacttgaccgcg 134
           || ||    ||| |||| |||||||||||  | || |||||||||||||| || ||||| 
Sbjct: 388 cttggtgcttataccaaaagcaagcaccccactgaatatttctgcaagaatttaaccgca 447

                                                                       
Query: 135 agcgatacgagcacgcacggcgggttctcggtgccgcgaagagccgcagagaagctgttc 194
           || |||||||| || || || || ||||||||||| ||||| || ||||||||| |||||
Sbjct: 448 agtgatacgagtacacatggtggtttctcggtgccacgaagggctgcagagaagttgttc 507

                                                                       
Query: 195 ccacagctggattactcgatgcagcctcctaaccaggagcttatcgtgcgagatttgcat 254
           ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 508 ccacaactggattactcaatgcaacctcctaaccaggagcttattgttcgagatttgcat 567

                                                                       
Query: 255 gacaacatgtggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacg 314
           || |||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 568 gataacatgtggacattccgtcacatttatcgtggacagccaaaacgacatcttctaaca 627

                                                                       
Query: 315 actggatggagtctctttgttggcgccaaacggcttacagcaggggattctgtcttgttt 374
           ||||||||||||||||||||||| || || || || | ||||||||| |||||||| |||
Sbjct: 628 actggatggagtctctttgttggggcaaagcgtctaaaagcaggggactctgtcttattt 687

                                                          
Query: 375 atcagggatgagaagtctcaactacttgtgggtgttaggcgggccac 421
           || |||||||||||||| ||||| ||| ||||||||||||| |||||
Sbjct: 688 ataagggatgagaagtcacaacttcttttgggtgttaggcgagccac 734
to top
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
              complete sequence
          Length = 163448

 Score =  127 bits (64), Expect = 3e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                          
Query: 203    ggattactcgatgcagcctcctaaccaggagcttatcgtgcgagatttgcatgacaacat 262
              ||||||||| ||||| |||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 137789 ggattactcaatgcaacctcctaaccaggagcttattgttcgagatttgcatgataacat 137730

                                          
Query: 263    gtggacatttcgtcacatttatcgtggt 290
              ||||||||| ||||||||||||||||||
Sbjct: 137729 gtggacattccgtcacatttatcgtggt 137702



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                          
Query: 291    cagccaaagcgacatctcctaacgactggatggagtctctttgttggcgccaaacggctt 350
              |||||||| |||||||| ||||| ||||||||||||||||||||||| || || || || 
Sbjct: 137592 cagccaaaacgacatcttctaacaactggatggagtctctttgttggggcaaagcgtcta 137533

                                        
Query: 351    acagcaggggattctgtcttgtttat 376
              | ||||||||| |||||||| |||||
Sbjct: 137532 aaagcaggggactctgtcttatttat 137507



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                          
Query: 88     ccaagagcaagcacccggccgagtatttctgcaagaacttgaccgcgagcgatacgagca 147
              |||| |||||||||||  | || |||||||||||||| || ||||| || |||||||| |
Sbjct: 137991 ccaaaagcaagcaccccactgaatatttctgcaagaatttaaccgcaagtgatacgagta 137932

                                                                       
Query: 148    cgcacggcgggttctcggtgccgcgaagagccgcagagaagctgttcccacagctgg 204
              | || || || ||||||||||| ||||| || ||||||||| |||||||||| ||||
Sbjct: 137931 cacatggtggtttctcggtgccacgaagggctgcagagaagttgttcccacaactgg 137875



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 377    cagggatgagaagtctcaactacttgtgggtgttaggcgggccac 421
              ||||||||||||||| ||||| ||| ||||||||||||| |||||
Sbjct: 137071 cagggatgagaagtcacaacttcttttgggtgttaggcgagccac 137027



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 15     tatgcacagatgaccctgcaaccagtaaactctg 48
              ||||||||||||||||| || |||||||||||||
Sbjct: 138248 tatgcacagatgacccttcagccagtaaactctg 138215
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  127 bits (64), Expect = 3e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                            
Query: 203      ggattactcgatgcagcctcctaaccaggagcttatcgtgcgagatttgcatgacaacat 262
                ||||||||| ||||| |||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 33925890 ggattactcaatgcaacctcctaaccaggagcttattgttcgagatttgcatgataacat 33925831

                                            
Query: 263      gtggacatttcgtcacatttatcgtggt 290
                ||||||||| ||||||||||||||||||
Sbjct: 33925830 gtggacattccgtcacatttatcgtggt 33925803



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                            
Query: 291      cagccaaagcgacatctcctaacgactggatggagtctctttgttggcgccaaacggctt 350
                |||||||| |||||||| ||||| ||||||||||||||||||||||| || || || || 
Sbjct: 33925693 cagccaaaacgacatcttctaacaactggatggagtctctttgttggggcaaagcgtcta 33925634

                                          
Query: 351      acagcaggggattctgtcttgtttat 376
                | ||||||||| |||||||| |||||
Sbjct: 33925633 aaagcaggggactctgtcttatttat 33925608



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                            
Query: 88       ccaagagcaagcacccggccgagtatttctgcaagaacttgaccgcgagcgatacgagca 147
                |||| |||||||||||  | || |||||||||||||| || ||||| || |||||||| |
Sbjct: 33926092 ccaaaagcaagcaccccactgaatatttctgcaagaatttaaccgcaagtgatacgagta 33926033

                                                                         
Query: 148      cgcacggcgggttctcggtgccgcgaagagccgcagagaagctgttcccacagctgg 204
                | || || || ||||||||||| ||||| || ||||||||| |||||||||| ||||
Sbjct: 33926032 cacatggtggtttctcggtgccacgaagggctgcagagaagttgttcccacaactgg 33925976



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 377      cagggatgagaagtctcaactacttgtgggtgttaggcgggccac 421
                ||||||||||||||| ||||| ||| ||||||||||||| |||||
Sbjct: 33925172 cagggatgagaagtcacaacttcttttgggtgttaggcgagccac 33925128



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 114      ttctgcaagaacttgaccgcgagcgatacgagcacgcacggcgggttctcggtgcc 169
                ||||||||||  ||||| |||||||| || ||||||||||| |||||||| |||||
Sbjct: 34318345 ttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgcc 34318290



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 15       tatgcacagatgaccctgcaaccagtaaactctg 48
                ||||||||||||||||| || |||||||||||||
Sbjct: 33926349 tatgcacagatgacccttcagccagtaaactctg 33926316
to top
>ref|NM_101840.2| Arabidopsis thaliana MP (MONOPTEROS); transcription factor AT1G19850
            (MP) mRNA, complete cds
          Length = 3375

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                        
Query: 264  tggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacgactggatgg 323
            ||||||||||| || || || || || || |||||| ||||||||||||| || ||||||
Sbjct: 1096 tggacatttcgccatatctaccgagggcaaccaaagagacatctcctaactacaggatgg 1155

                                                                        
Query: 324  agtctctttgttggcgccaaacggcttacagcaggggattctgtcttgtttatcagggat 383
            ||| | || |||||  | ||  |  | | ||| ||||||||||| ||||| |||||||||
Sbjct: 1156 agtttgttcgttggatcgaagagattgagagctggggattctgttttgttcatcagggat 1215

                                                 
Query: 384  gagaagtctcaactacttgtgggtgttaggcgggcca 420
            |||||||| |||||  | || ||||||||||| ||||
Sbjct: 1216 gagaagtcacaacttatggtcggtgttaggcgtgcca 1252
to top
>gb|BT008805.1| Arabidopsis thaliana At1g19850 gene, complete cds
          Length = 2709

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 264 tggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacgactggatgg 323
           ||||||||||| || || || || || || |||||| ||||||||||||| || ||||||
Sbjct: 622 tggacatttcgccatatctaccgagggcaaccaaagagacatctcctaactacaggatgg 681

                                                                       
Query: 324 agtctctttgttggcgccaaacggcttacagcaggggattctgtcttgtttatcagggat 383
           ||| | || |||||  | ||  |  | | ||| ||||||||||| ||||| |||||||||
Sbjct: 682 agtttgttcgttggatcgaagagattgagagctggggattctgttttgttcatcagggat 741

                                                
Query: 384 gagaagtctcaactacttgtgggtgttaggcgggcca 420
           |||||||| |||||  | || ||||||||||| ||||
Sbjct: 742 gagaagtcacaacttatggtcggtgttaggcgtgcca 778
to top
>gb|AF334716.1| Arabidopsis thaliana clone C00027 (h) auxin response factor 5
           (At1g19850) mRNA, complete cds
          Length = 2709

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 264 tggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacgactggatgg 323
           ||||||||||| || || || || || || |||||| ||||||||||||| || ||||||
Sbjct: 622 tggacatttcgccatatctaccgagggcaaccaaagagacatctcctaactacaggatgg 681

                                                                       
Query: 324 agtctctttgttggcgccaaacggcttacagcaggggattctgtcttgtttatcagggat 383
           ||| | || |||||  | ||  |  | | ||| ||||||||||| ||||| |||||||||
Sbjct: 682 agtttgttcgttggatcgaagagattgagagctggggattctgttttgttcatcagggat 741

                                                
Query: 384 gagaagtctcaactacttgtgggtgttaggcgggcca 420
           |||||||| |||||  | || ||||||||||| ||||
Sbjct: 742 gagaagtcacaacttatggtcggtgttaggcgtgcca 778
to top
>dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G19, full
           insert sequence
          Length = 3550

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 246 gatttgcatgacaacatgtggacatttcgtcacatttatcgtggtcagccaaagcgacat 305
           ||||||||||| ||  |||||||||| |||||||| ||||| |||||||||||  | |||
Sbjct: 903 gatttgcatgataatgtgtggacattccgtcacatatatcggggtcagccaaaaaggcat 962

                                        
Query: 306 ctcctaacgactggatggagtctctttgt 334
           || || || ||||| |||||||| |||||
Sbjct: 963 ctgcttaccactggctggagtctatttgt 991
to top
>gb|BT002050.1| Arabidopsis thaliana transcription factor (At1g19850) mRNA, complete
            cds
          Length = 3371

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                        
Query: 264  tggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacgactggatgg 323
            ||||||||||| || || || || || || |||||| ||||||||||||| || ||||||
Sbjct: 1096 tggacatttcgccatatctaccgagggcaaccaaagagacatctcctaactacaggatgg 1155

                                                                        
Query: 324  agtctctttgttggcgccaaacggcttacagcaggggattctgtcttgtttatcagggat 383
            ||| | || |||||  | ||  |  | | ||| ||||||||||| ||||| |||||||||
Sbjct: 1156 agtttgttcgttggatcgaagagattgagagctggggattctgttttgttcatcagggat 1215

                                                 
Query: 384  gagaagtctcaactacttgtgggtgttaggcgggcca 420
            |||||||| |||||  | || ||||||||||| ||||
Sbjct: 1216 gagaagtcacaacttatggtcggtgttaggcgtgcca 1252
to top
>gb|AF037229.1|AF037229 Arabidopsis thaliana transcription factor (MP) mRNA, complete cds
          Length = 3106

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 264 tggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacgactggatgg 323
           ||||||||||| || || || || || || |||||| ||||||||||||| || ||||||
Sbjct: 839 tggacatttcgccatatctaccgagggcaaccaaagagacatctcctaactacaggatgg 898

                                                                       
Query: 324 agtctctttgttggcgccaaacggcttacagcaggggattctgtcttgtttatcagggat 383
           ||| | || |||||  | ||  |  | | ||| ||||||||||| ||||| |||||||||
Sbjct: 899 agtttgttcgttggatcgaagagattgagagctggggattctgttttgttcatcagggat 958

                                                
Query: 384 gagaagtctcaactacttgtgggtgttaggcgggcca 420
           |||||||| |||||  | || ||||||||||| ||||
Sbjct: 959 gagaagtcacaacttatggtcggtgttaggcgtgcca 995
to top
>gb|U79557.1|U79557 Arabidopsis thaliana IAA24 (IAA24) mRNA, partial cds
          Length = 2690

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 264 tggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacgactggatgg 323
           ||||||||||| || || || || || || |||||| ||||||||||||| || ||||||
Sbjct: 586 tggacatttcgccatatctaccgagggcaaccaaagagacatctcctaactacaggatgg 645

                                                                       
Query: 324 agtctctttgttggcgccaaacggcttacagcaggggattctgtcttgtttatcagggat 383
           ||| | || |||||  | ||  |  | | ||| ||||||||||| ||||| |||||||||
Sbjct: 646 agtttgttcgttggatcgaagagattgagagctggggattctgttttgttcatcagggat 705

                                                
Query: 384 gagaagtctcaactacttgtgggtgttaggcgggcca 420
           |||||||| |||||  | || ||||||||||| ||||
Sbjct: 706 gagaagtcacaacttatggtcggtgttaggcgtgcca 742
to top
>dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response factor 7a, partial cds
          Length = 3372

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 246 gatttgcatgacaacatgtggacatttcgtcacatttatcgtggtcagccaaagcgacat 305
           ||||||||||| ||  |||||||||| |||||||| ||||| |||||||||||  | |||
Sbjct: 478 gatttgcatgataatgtgtggacattccgtcacatatatcggggtcagccaaaaaggcat 537

                                        
Query: 306 ctcctaacgactggatggagtctctttgt 334
           || || || ||||| |||||||| |||||
Sbjct: 538 ctgcttaccactggctggagtctatttgt 566
to top
>gb|DQ340259.1| Lycopersicon esculentum auxin response factor 4 (ARF4) mRNA,
           complete cds
          Length = 2454

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 263 gtggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacgactggatg 322
           ||||| |||||||||||||||| | || ||||||| ||||||| | || || ||||||||
Sbjct: 686 gtggaaatttcgtcacatttatagaggccagccaaggcgacatttgctcactactggatg 745

                       
Query: 323 gagtctctttgt 334
           |||| |||||||
Sbjct: 746 gagtatctttgt 757
to top
>ref|XM_474307.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2457

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 114 ttctgcaagaacttgaccgcgagcgatacgagcacgcacggcgggttctcggtgcc 169
           ||||||||||  ||||| |||||||| || ||||||||||| |||||||| |||||
Sbjct: 403 ttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgcc 458
to top
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
             complete sequence
          Length = 159894

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 114   ttctgcaagaacttgaccgcgagcgatacgagcacgcacggcgggttctcggtgcc 169
             ||||||||||  ||||| |||||||| || ||||||||||| |||||||| |||||
Sbjct: 42748 ttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgcc 42693
to top
>dbj|AK071455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093B04, full
           insert sequence
          Length = 3262

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 114 ttctgcaagaacttgaccgcgagcgatacgagcacgcacggcgggttctcggtgcc 169
           ||||||||||  ||||| |||||||| || ||||||||||| |||||||| |||||
Sbjct: 738 ttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgcc 793
to top
>gb|AY105215.1| Zea mays PCO121637 mRNA sequence
          Length = 1492

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 263 gtggacatttcgtcacatttatcgtggtcagccaaagcgacatctcctaacgactggatg 322
           ||||| ||| |||||||| | |||||| ||||||||||| ||||| ||||| || || ||
Sbjct: 257 gtggaaattccgtcacatctttcgtggccagccaaagcggcatcttctaactacaggttg 316

                       
Query: 323 gagtctctttgt 334
           |||| |||||||
Sbjct: 317 gagtgtctttgt 328
to top
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete
             sequence
          Length = 95419

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 114   ttctgcaagaacttgaccgcgagcgatacgagcacgcacggcgggttctcggtgcc 169
             ||||||||||  ||||| |||||||| || ||||||||||| |||||||| |||||
Sbjct: 90636 ttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgcc 90581
to top
>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete
            sequence
          Length = 100419

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 114  ttctgcaagaacttgaccgcgagcgatacgagcacgcacggcgggttctcggtgcc 169
            ||||||||||  ||||| |||||||| || ||||||||||| |||||||| |||||
Sbjct: 3501 ttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgcc 3446
to top
>dbj|AB071298.1| Oryza sativa OsARF8 mRNA for auxin response factor 8, partial cds
          Length = 2388

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 114 ttctgcaagaacttgaccgcgagcgatacgagcacgcacggcgggttctcggtgcc 169
           ||||||||||  ||||| |||||||| || ||||||||||| |||||||| |||||
Sbjct: 334 ttctgcaagacattgacggcgagcgacaccagcacgcacggggggttctccgtgcc 389
to top
>dbj|AK103280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124L19, full
            insert sequence
          Length = 3731

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 270  tttcgtcacatttatcgtggtcagccaaagcgacatctcctaacgactggatggagtctc 329
            |||||||| || | ||||||||||||||||||||| || ||||| || || |||||  ||
Sbjct: 1258 tttcgtcatatctttcgtggtcagccaaagcgacaccttctaactacaggctggagcgtc 1317

                 
Query: 330  tttgt 334
            |||||
Sbjct: 1318 tttgt 1322
to top
>ref|NM_123060.2| Arabidopsis thaliana ARF8 (AUXIN RESPONSE FACTOR 8); transcription
           factor AT5G37020 (ARF8) mRNA, complete cds
          Length = 2840

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 303 catctcctaacgactggatggagtctctttgt 334
           ||||||||||| |||||||||||| |||||||
Sbjct: 688 catctcctaactactggatggagtgtctttgt 719
to top
>dbj|AB024026.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15O15
          Length = 23026

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 303   catctcctaacgactggatggagtctctttgt 334
             ||||||||||| |||||||||||| |||||||
Sbjct: 16320 catctcctaactactggatggagtgtctttgt 16351
to top
>gb|AF042196.1|AF042196 Arabidopsis thaliana auxin response factor 8 (ARF8) mRNA, complete
           cds
          Length = 2817

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 303 catctcctaacgactggatggagtctctttgt 334
           ||||||||||| |||||||||||| |||||||
Sbjct: 688 catctcctaactactggatggagtgtctttgt 719
to top
>gb|AY669790.1| Arabidopsis thaliana clone C105345 ARF8 (At5g37020) mRNA, complete
           cds
          Length = 2467

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 303 catctcctaacgactggatggagtctctttgt 334
           ||||||||||| |||||||||||| |||||||
Sbjct: 565 catctcctaactactggatggagtgtctttgt 596
to top
>ref|XM_464101.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3420

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 252 catgacaacatgtggacatttcgtcacatttatcgtggtcagccaaa 298
           ||||||||  |||||||||||||||| || ||||| ||||| |||||
Sbjct: 571 catgacaatgtgtggacatttcgtcatatatatcgaggtcaaccaaa 617



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 1   atactgatgaggggtatgcacagatgaccctgcaaccagt 40
           |||||||||| |  |||||||||||||| || ||||||||
Sbjct: 320 atactgatgaagtttatgcacagatgactcttcaaccagt 359
to top
>emb|AJ234409.1|HVU234409 Hordeum vulgare partial mRNA; clone cMWG0660
          Length = 485

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                       
Query: 92  gagcaagcacccggccgagtatttctgcaagaacttgaccgcgagcgatacgagcacgca 151
           ||||||||| ||| || | || ||||||||||   |||| || ||||| || ||||||||
Sbjct: 136 gagcaagcagccgaccaactacttctgcaagacgctgacggccagcgacaccagcacgca 195

                             
Query: 152 cggcgggttctcggtgcc 169
           |||||| ||||| |||||
Sbjct: 196 cggcggcttctccgtgcc 213
to top
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 144   agcacgcacggcgggttctcggtgccgcg 172
             |||||||||||||| ||||| ||||||||
Sbjct: 45344 agcacgcacggcggcttctccgtgccgcg 45372
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 246      gatttgcatgacaacatgtggacatttcgtcacatttatcg 286
                ||||||||||| ||  |||||||||| |||||||| |||||
Sbjct: 29144262 gatttgcatgataatgtgtggacattccgtcacatatatcg 29144302
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 144      agcacgcacggcgggttctcggtgccgcg 172
                |||||||||||||| ||||| ||||||||
Sbjct: 27814927 agcacgcacggcggcttctccgtgccgcg 27814955
to top
>gb|AC007797.7|AC007797 Arabidopsis thaliana chromosome I BAC F6F9 genomic sequence, complete
             sequence
          Length = 119942

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 294   ccaaagcgacatctcctaacgactggatggagt 326
             |||||| ||||||||||||| || |||||||||
Sbjct: 34121 ccaaagagacatctcctaactacaggatggagt 34089
to top
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0596H10
          Length = 166570

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 246    gatttgcatgacaacatgtggacatttcgtcacatttatcg 286
              ||||||||||| ||  |||||||||| |||||||| |||||
Sbjct: 159249 gatttgcatgataatgtgtggacattccgtcacatatatcg 159289
to top
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1215_E11
          Length = 105301

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 246   gatttgcatgacaacatgtggacatttcgtcacatttatcg 286
             ||||||||||| ||  |||||||||| |||||||| |||||
Sbjct: 11549 gatttgcatgataatgtgtggacattccgtcacatatatcg 11589
to top
>dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E23, full
           insert sequence
          Length = 2712

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 144 agcacgcacggcgggttctcggtgccgcg 172
           |||||||||||||| ||||| ||||||||
Sbjct: 678 agcacgcacggcggcttctccgtgccgcg 706
to top
>emb|CT572988.8| Mouse DNA sequence from clone RP23-87I2 on chromosome 14, complete
              sequence
          Length = 197706

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 20     acagatgaccctgcaaccagtaaac 44
              ||||||||| |||||||||||||||
Sbjct: 153763 acagatgactctgcaaccagtaaac 153739
to top
>gb|AY902381.1| Triticum aestivum auxin response factor 2 mRNA, partial cds
          Length = 608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 144 agcacgcacggcgggttctcggtgc 168
           |||||||||||||| ||||||||||
Sbjct: 15  agcacgcacggcggcttctcggtgc 39
to top
>gb|AF037228.1|AF037228 Arabidopsis thaliana transcription factor (MP) gene, complete cds
          Length = 4224

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 294  ccaaagcgacatctcctaacgactggatggagt 326
            |||||| ||||||||||||| || |||||||||
Sbjct: 1461 ccaaagagacatctcctaactacaggatggagt 1493
to top
>dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1,
           complete cds
          Length = 2622

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 144 agcacgcacggcgggttctcggtgccgcg 172
           |||||||||||||| ||||| ||||||||
Sbjct: 570 agcacgcacggcggcttctccgtgccgcg 598
to top
>gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosome 16, complete sequence
          Length = 203553

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    agctgttcccacagctggat 206
              ||||||||||||||||||||
Sbjct: 126167 agctgttcccacagctggat 126148
to top
>emb|X53086.1|SMPROBAG S.marcescens proBA genes for gamma-glutamyl kinase (EC 2.7.2.11)
           and gamma-glutamyl-phosphate reductase (EC 1.2.1.41)
          Length = 2926

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 agctgttcccacagctggat 206
           ||||||||||||||||||||
Sbjct: 450 agctgttcccacagctggat 431
to top
>dbj|AP005827.1| Mus musculus genomic DNA, chromosome 16 clone:RP21-668B6, complete
             sequence
          Length = 214865

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   agctgttcccacagctggat 206
             ||||||||||||||||||||
Sbjct: 99539 agctgttcccacagctggat 99558
to top
>gb|AC131867.4| Rattus norvegicus 1 BAC CH230-397C2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 133470

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   tgtgggtgttaggcgggcca 420
             ||||||||||||||||||||
Sbjct: 58125 tgtgggtgttaggcgggcca 58144
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 1       atactgatgaggggtatgcacagatgaccctgcaaccagt 40
               |||||||||| |  |||||||||||||| || ||||||||
Sbjct: 2212843 atactgatgaagtttatgcacagatgactcttcaaccagt 2212804
to top
>emb|BX005056.7| Zebrafish DNA sequence from clone CH211-77A11 in linkage group 7,
              complete sequence
          Length = 173708

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    aagctgttcccacagctgga 205
              ||||||||||||||||||||
Sbjct: 149881 aagctgttcccacagctgga 149862
to top
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1679_B08
          Length = 142529

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 1      atactgatgaggggtatgcacagatgaccctgcaaccagt 40
              |||||||||| |  |||||||||||||| || ||||||||
Sbjct: 127536 atactgatgaagtttatgcacagatgactcttcaaccagt 127497
to top
>emb|AL935204.10| Zebrafish DNA sequence from clone CH211-230K10, complete sequence
          Length = 204217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   aagctgttcccacagctgga 205
             ||||||||||||||||||||
Sbjct: 73133 aagctgttcccacagctgga 73114
to top
>dbj|D90351.1|SMAPROBA Serratia marcescens proBA operon genes for gamma-glutamyl kinase,
           gamma-glutamyl phosphate reductase
          Length = 2926

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 agctgttcccacagctggat 206
           ||||||||||||||||||||
Sbjct: 450 agctgttcccacagctggat 431
to top
>emb|AL953895.8| Zebrafish DNA sequence from clone CH211-231M14 in linkage group 7,
              complete sequence
          Length = 167156

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    aagctgttcccacagctgga 205
              ||||||||||||||||||||
Sbjct: 143079 aagctgttcccacagctgga 143060


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,708,676
Number of Sequences: 3902068
Number of extensions: 2708676
Number of successful extensions: 41418
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41260
Number of HSP's gapped (non-prelim): 158
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top