ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl06e08 |
|---|---|
| Clone Library Name | barley_pub |
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 37.4 bits (85), Expect = 0.018 Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = -1 Query: 287 FHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEKITLPEAPAGVSGLPNVAVNR 111 F GPPGA P+ V SG PP P FPG G P PAG+ G+P + R Sbjct: 390 FEGPPGAPG-PQGVVGPSG----PPGPPGFPGDPG--------PPGPAGLPGIPGIDGIR 436 Query: 110 HIPAREILTRFPFGG 66 P I+ F F G Sbjct: 437 GPPGTVIMMPFQFAG 451
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 33.5 bits (75), Expect = 0.26 Identities = 24/57 (42%), Positives = 27/57 (47%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 129 GP +GPPG P R G P A FPG AGR T P P+G+SG P Sbjct: 761 GPSGPNGPPG----PAGSRGDGGP---PGATGFPGAAGR-----TGPPGPSGISGPP 805
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 33.1 bits (74), Expect = 0.33 Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 135 GPP GP GA R P R G L A+ PG AG+ E+ T P PAG G Sbjct: 451 GPPGAAGPTGA-RGPPGPRGQQGFQGLAGAQGTPGEAGKTGERGAVGATGPSGPAGPGG 508
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 33.1 bits (74), Expect = 0.33 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = -3 Query: 450 TPEPSPQSHPFPEVTDPFCRLPLPTLFHWPEAVHLGDLMRL*VRPGVNG 304 TP P+P P P T P PL ++P +V D +R +RP NG Sbjct: 170 TPSPTPSPTPPPSPTPPPSPSPLGDPMYFPSSVGTTDQLRDYIRPLCNG 218
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 32.3 bits (72), Expect = 0.57 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -1 Query: 218 PPAEP-FPGLAGR*AEKITLPEAPAGVSGLP 129 PP P +PGL G+ E + P+ P G+ GLP Sbjct: 1033 PPGLPGYPGLVGQKGEAVVGPQGPPGIPGLP 1063
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 32.3 bits (72), Expect = 0.57 Identities = 23/57 (40%), Positives = 27/57 (47%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 129 GP +GPPG P R G P A FPG AGR T P P+G++G P Sbjct: 763 GPSGPNGPPG----PAGSRGDGGP---PGATGFPGAAGR-----TGPPGPSGITGPP 807
>CATB_STRRE (O87864) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 740 Score = 32.3 bits (72), Expect = 0.57 Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 16/85 (18%) Frame = +2 Query: 188 LPTLETVQPEVG-SSGRKSTARR------AVSGAPPAAHENP-EDRVPFTPGRT-----H 328 L TLE VQ E SSG K + +G AA E E +VPFTPGR H Sbjct: 518 LRTLENVQQEFNASSGAKKVSLADLIVLGGAAGVEKAAKEAGFEIQVPFTPGRVDATEEH 577 Query: 329 NRIRS---PR*TASGQWNNVGKGSR 394 + S TA G N +GKG+R Sbjct: 578 TDVESFEALEPTADGFRNYLGKGNR 602
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 32.0 bits (71), Expect = 0.74 Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Frame = -1 Query: 299 GPPDFHGP---PGAHRTPRDVRCS--SGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSG 135 GP HG PGA PR SG LP +PG+ G E + E PAG+ G Sbjct: 564 GPNGDHGDCGMPGAPGKPRSAGSDGLSGSPGLPGIPGYPGMKGEAGEIVGPMENPAGIPG 623 Query: 134 L 132 L Sbjct: 624 L 624
>FRAT1_HUMAN (Q92837) Proto-oncogene FRAT1 (Frequently rearranged in advanced| T-cell lymphomas) (Frat-1) Length = 279 Score = 32.0 bits (71), Expect = 0.74 Identities = 26/64 (40%), Positives = 29/64 (45%), Gaps = 6/64 (9%) Frame = -2 Query: 394 PTSLAYIVPLARGCSP----WRPDAVMSTTGRERYSVLRIFMGRRGRTGHRAT--CGALP 233 P LA VP + SP P A+ T G VLR +G RGR RA C A Sbjct: 74 PGPLAAAVPADKARSPAVPLLLPPALAETVGPAPPGVLRCALGDRGRVRGRAAPYCVAEL 133 Query: 232 ATGP 221 ATGP Sbjct: 134 ATGP 137
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 31.6 bits (70), Expect = 0.97 Identities = 37/117 (31%), Positives = 47/117 (40%), Gaps = 10/117 (8%) Frame = -1 Query: 323 YDRA*TVLGPPDFHGPPGAHRTPR-----DVRCSSGHWTLPPAEPFPGLAGR*AEK-ITL 162 Y A + G P G PGA P R + G P PGL G E + Sbjct: 1304 YAGAAGIKGEPGLPGIPGAKGEPGLSGIPGKRGNDGIPGKPGPAGLPGLPGMKGESGLPG 1363 Query: 161 PEAPAGVSGLPNVAVNRHI---PAREILTRFPFGGCA*SRYLPGLPRPLG-SAYPCA 3 P+ PAG+ GLP + + P ++ T FP +PGLP G S YP A Sbjct: 1364 PQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPG-----QPGIPGLPGMKGDSGYPGA 1415 Score = 29.6 bits (65), Expect = 3.7 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 13/102 (12%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLP-----PAEP-------FPGLAGR*AEKITLPE 156 G P G PG PR ++ +G P P P PGL G+ + IT P+ Sbjct: 1220 GLPGLEGQPG----PRGMKGEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSITGPK 1275 Query: 155 APAGVSGLPNVAVNRHIPAREILTRFP-FGGCA*SRYLPGLP 33 AG+ GLP +P + P + G A + PGLP Sbjct: 1276 GNAGLPGLPGKDGLPGLPGLKGEPGKPGYAGAAGIKGEPGLP 1317 Score = 28.5 bits (62), Expect = 8.2 Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 2/101 (1%) Frame = -1 Query: 305 VLGPPDFHGPPGA--HRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGL 132 V GPP GPPGA PR V + PGL G+ + G+ GL Sbjct: 434 VQGPPGLAGPPGAKGEPGPRGV----------DGQSIPGLPGK--------DGRPGLDGL 475 Query: 131 PNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGSAYP 9 P +P R P G LPG P P G P Sbjct: 476 PGRKGEMGLPG----VRGPPGDSL--NGLPGPPGPRGPQGP 510
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 31.2 bits (69), Expect = 1.3 Identities = 33/95 (34%), Positives = 36/95 (37%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVA 120 GPP +GPPG L PA P PG AG+ + P P G SGLP Sbjct: 88 GPPGPNGPPG------------DRGALGPAGP-PGPAGK---GLPGPPGPPGPSGLPGGN 131 Query: 119 VNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGSA 15 R P L FP PG P P G A Sbjct: 132 GFRGPPGPSGLPGFPGP--------PGPPGPPGLA 158
>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor| Length = 1691 Score = 31.2 bits (69), Expect = 1.3 Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 18/107 (16%) Frame = -1 Query: 299 GPPDFHGPPGAHRT--------PRDVRCSSGHWTLPPAEPFPGLAGR*AEK-------IT 165 G P GPPG + P+ V+ S G +P PGL G+ EK I Sbjct: 1015 GKPGLTGPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIG 1074 Query: 164 LP--EAPAGVSGLPNVAVNRHIPAREILTRFP-FGGCA*SRYLPGLP 33 LP P G +GLP N I T P G ++ PGLP Sbjct: 1075 LPGLPGPKGEAGLPGYPGNPGIKGSMGDTGLPGLPGTPGAKGQPGLP 1121 Score = 29.6 bits (65), Expect = 3.7 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP 204 GPP GPPG H +P D C +G PP P Sbjct: 435 GPP---GPPGPHISPSDEICETG----PPGPP 459
>CO8A1_HUMAN (P27658) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 31.2 bits (69), Expect = 1.3 Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 7/111 (6%) Frame = -1 Query: 332 GYEYDRA*TVLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE- 156 G+ A V GPP HGPPG P + P FPG G + E Sbjct: 244 GFGMPGAPGVKGPPGMHGPPGPVGLPGVGK--------PGVTGFPGPQGPLGKPGAPGEP 295 Query: 155 APAGVSGLPNVAVNRHI-----PAREILTRFP-FGGCA*SRYLPGLPRPLG 21 P G G+P V I P ++ + P F G + LPGLP P G Sbjct: 296 GPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
>US10_EHV4 (P18349) 28 kDa protein (ORF3)| Length = 259 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +3 Query: 108 VAVDGDVRKSGDAGGGLG 161 +AVDGDVR GD GGG G Sbjct: 40 MAVDGDVRTGGDCGGGEG 57
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 28.1 bits (61), Expect(2) = 2.1 Identities = 24/87 (27%), Positives = 36/87 (41%) Frame = -1 Query: 284 HGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAVNRHI 105 H PP AH P + S PA+P PGL ++ + P A +GL + Sbjct: 970 HHPPSAHPPPLQLMPQSQPLPSSPAQP-PGLTQ--SQSLPPPAASHPTTGL------HQV 1020 Query: 104 PAREILTRFPFGGCA*SRYLPGLPRPL 24 P++ + PF +PG P P+ Sbjct: 1021 PSQSPFPQHPF--------VPGGPPPI 1039 Score = 20.8 bits (42), Expect(2) = 2.1 Identities = 10/29 (34%), Positives = 11/29 (37%) Frame = -3 Query: 447 PEPSPQSHPFPEVTDPFCRLPLPTLFHWP 361 P P H P T P +LP P P Sbjct: 912 PAPLAMPHIKPPPTTPIPQLPAPQAHKHP 940
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 30.4 bits (67), Expect = 2.2 Identities = 35/124 (28%), Positives = 42/124 (33%), Gaps = 27/124 (21%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSG---------HWTLPPA-----EPFPGLAGR*AEKITL 162 GPP F GPPG TP + C + + P + PGL G Sbjct: 642 GPPGFLGPPGPAGTPGQIDCDTDVKRAVGGDRQEAIQPGCIAGPKGLPGLPG-------- 693 Query: 161 PEAPAGVSGLPNV---------AVNRHIPAREILTRFP----FGGCA*SRYLPGLPRPLG 21 P P G GL + R +P FP F G S+ GLP P G Sbjct: 694 PPGPTGAKGLRGIPGFAGADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGLPGPDG 753 Query: 20 SAYP 9 S P Sbjct: 754 SPGP 757
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 30.4 bits (67), Expect = 2.2 Identities = 30/94 (31%), Positives = 35/94 (37%), Gaps = 1/94 (1%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITL-PEAPAGVSGLPNV 123 G P GPPG H R G LP PG G + + P PAG+ GLP Sbjct: 816 GFPGVPGPPG-HSCERGAPGIPGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPG- 873 Query: 122 AVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLG 21 +P R G LPG+P P G Sbjct: 874 -----LPGRP--------GAHGPPGLPGIPGPFG 894 Score = 30.4 bits (67), Expect = 2.2 Identities = 33/113 (29%), Positives = 38/113 (33%), Gaps = 20/113 (17%) Frame = -1 Query: 299 GPPDFHGPPGAHRTP-----RDVRCSSGHWTLP--------PAEP-------FPGLAGR* 180 GPP F GPPG P + S GH P P P PG G Sbjct: 677 GPPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGG-- 734 Query: 179 AEKITLPEAPAGVSGLPNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLG 21 EK + P P G G P V + IP G +PG+ P G Sbjct: 735 -EKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRG 786 Score = 30.0 bits (66), Expect = 2.8 Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 4/101 (3%) Frame = -1 Query: 299 GPPDFHGPPG----AHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGL 132 GPP GPPG R P+D+ P PG G + P+ P G G Sbjct: 1233 GPPGSSGPPGPAGATGRAPKDI-------------PDPGPPG--DQGPPGPDGPRGAPGP 1277 Query: 131 PNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLGSAYP 9 P +P L R G C LPG P P G P Sbjct: 1278 PG------LPGSVDLLRGEPGDCG----LPGPPGPPGPPGP 1308 Score = 29.6 bits (65), Expect = 3.7 Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK---ITLPEAPAGVSGLP 129 GPP G PG + DV PP P GL GR E + P P G GLP Sbjct: 367 GPPGDPGFPGRYGETGDVG--------PPGPP--GLLGRPGEACAGMIGPPGPQGFPGLP 416 Query: 128 NVAVNRHIPAR 96 + IP R Sbjct: 417 GLPGEAGIPGR 427
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 30.4 bits (67), Expect = 2.2 Identities = 31/108 (28%), Positives = 38/108 (35%), Gaps = 14/108 (12%) Frame = -1 Query: 302 LGPPDFHGPPGAHRT--------------PRDVRCSSGHWTLPPAEPFPGLAGR*AEKIT 165 +GPP F GP + T PR R G P+ P PG+ G Sbjct: 335 IGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQG-----PSGP-PGVPGSPGSSRP 388 Query: 164 LPEAPAGVSGLPNVAVNRHIPAREILTRFPFGGCA*SRYLPGLPRPLG 21 G GL R P ++ + GCA S LPG P P G Sbjct: 389 GLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGPPG 436
>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth factor-like domains 2) (Epidermal growth factor-like 1) Length = 3312 Score = 30.4 bits (67), Expect = 2.2 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Frame = -2 Query: 406 GSVLPTSLAYIVPLARGCSPWRPDAVMSTTGRERYSVLR-IFMGRRGRTGHRATCGALPA 230 GS+ P +L+ VP + SP D ++ G + S R G R R G CG L A Sbjct: 151 GSLSPGALSSGVPGSGNSSPLPSDFLIRHHGPKPVSSQRNAGTGSRKRVGTARCCGELWA 210 Query: 229 TGPYLRLNR--FQGWQAVKQKR*LFPRPPPASPDFLTSPSTA 110 TG + R G + +R P + P+ ++P TA Sbjct: 211 TGSKGQGERATTSGAERTAPRRNCLPGASGSGPELDSAPRTA 252
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 30.4 bits (67), Expect = 2.2 Identities = 21/67 (31%), Positives = 28/67 (41%) Frame = -1 Query: 302 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNV 123 +GPP GPPG P SSG + + FPG G + P+ G GLP + Sbjct: 801 IGPPGAMGPPGGEGPPG----SSGPPGIKGEKGFPGFPGL---DMPGPKGDKGSQGLPGL 853 Query: 122 AVNRHIP 102 +P Sbjct: 854 TGQSGLP 860
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/67 (29%), Positives = 27/67 (40%) Frame = -1 Query: 302 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNV 123 +GPP GPPG P SG + + FPG G + P+ G GLP + Sbjct: 801 IGPPGARGPPGGQGPPG----LSGPPGIKGEKGFPGFPGL---DMPGPKGDKGAQGLPGI 853 Query: 122 AVNRHIP 102 +P Sbjct: 854 TGQSGLP 860
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 30.0 bits (66), Expect = 2.8 Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 11/104 (10%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGV--- 141 GPP HGPPG P + P FPG G + P+ P GV Sbjct: 255 GPPGMHGPPGPVGLPGVGK--------PGVTGFPGPQGPLGKPGPPGEPGPQGPIGVPGV 306 Query: 140 ---SGLPNVAVNRHIPAREILTRFP-FGGCA*SRYLPGLPRPLG 21 GLP V P ++ + P F G + LPGLP P G Sbjct: 307 QGPPGLPGVGK----PGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 30.0 bits (66), Expect = 2.8 Identities = 24/86 (27%), Positives = 31/86 (36%) Frame = -1 Query: 284 HGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAVNRHI 105 H PPG R P V G G AG LPE PAG L + + Sbjct: 1856 HAPPGT-RKPHTVVVQMGE----------GTAG--TVTTLLPEEPAGALDLTGMRPESQL 1902 Query: 104 PAREILTRFPFGGCA*SRYLPGLPRP 27 +++ +FPFG + P P Sbjct: 1903 ACCDMVYKFPFGSSCTGTFHPAPSAP 1928
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 30.0 bits (66), Expect = 2.8 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPF-PGLAGR*AEKITLPEAPAGVSGLP 129 GPP G PGA TP + + L P EP PG AG P+ P G G P Sbjct: 187 GPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAG--------PQGPPGSPGQP 236
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 29.6 bits (65), Expect = 3.7 Identities = 28/83 (33%), Positives = 31/83 (37%), Gaps = 8/83 (9%) Frame = -1 Query: 332 GYEYDRA*TVLGPPDFH----GPPGA----HRTPRDVRCSSGHWTLPPAEPFPGLAGR*A 177 GYEY GP D H GP G + P D P FP AGR Sbjct: 1646 GYEYSP-----GPDDLHYSLYGPDGVPFYNYLGPEDAI---------PEPLFPSTAGRPG 1691 Query: 176 EKITLPEAPAGVSGLPNVAVNRH 108 ++I LPE P S L V H Sbjct: 1692 DRIPLPEPPLQPSELQPHYVASH 1714
>GUNB_FUSOX (P46236) Putative endoglucanase type B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 462 Score = 29.6 bits (65), Expect = 3.7 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 191 PTLETVQPEVGSSGRKSTARRAVSGAPPAAHENP 292 P+ T + G +TA +V+ APPAA +NP Sbjct: 74 PSSTTATKTTATGGSSTTAGGSVTSAPPAASDNP 107
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 29.6 bits (65), Expect = 3.7 Identities = 20/57 (35%), Positives = 22/57 (38%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 129 G P FHG PG P PP P P L G + P+ P G GLP Sbjct: 1223 GEPGFHGFPGVQGPPG-----------PPGSPGPALEG--PKGNPGPQGPPGRPGLP 1266
>SFTPA_MACMU (Q9TUC5) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)| (PSAP) (Fragment) Length = 165 Score = 29.6 bits (65), Expect = 3.7 Identities = 19/51 (37%), Positives = 21/51 (41%) Frame = -1 Query: 281 GPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 129 GPPG P D+ C G+ LP A PG G E G GLP Sbjct: 7 GPPGPMGPPGDMPCFPGNDGLPGAPGIPGECGEKGE-----PGERGPPGLP 52
>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor| Length = 743 Score = 29.6 bits (65), Expect = 3.7 Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 9/102 (8%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE-APAGVSGLPNV 123 GPP HGPPG P + P FPG G + E P G+ G+P V Sbjct: 255 GPPGMHGPPGPVGLPGVGK--------PGVTGFPGPQGPLGKPGPPGEPGPQGLIGVPGV 306 Query: 122 -------AVNRHIPAREILTRFP-FGGCA*SRYLPGLPRPLG 21 V + P ++ + P F G + LPGLP P G Sbjct: 307 QGPPGMPGVGK--PGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 29.6 bits (65), Expect = 3.7 Identities = 23/76 (30%), Positives = 28/76 (36%) Frame = -1 Query: 296 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 117 PP PG+ P G PP PFPG G +P P G+ P Sbjct: 684 PPPPPPLPGSVGVPPPPPLPGGPGLPPPPPPFPGAPG-------IPPPPPGMGVPPPPPF 736 Query: 116 NRHIPAREILTRFPFG 69 +PA +L PFG Sbjct: 737 GFGVPAAPVL---PFG 749
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 29.6 bits (65), Expect = 3.7 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSG 231 GPP F GPPG TP C +G Sbjct: 637 GPPGFPGPPGPPGTPGQRDCDTG 659
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 29.3 bits (64), Expect = 4.8 Identities = 23/67 (34%), Positives = 27/67 (40%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVA 120 GPP GPPGA P + +G P + PG G P PAG +G P A Sbjct: 148 GPPGPPGPPGAPGDPGE----AGTPGRPGTDAAPGSPGPRG-----PPGPAGEAGAPGPA 198 Query: 119 VNRHIPA 99 PA Sbjct: 199 GEPGTPA 205
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 29.3 bits (64), Expect = 4.8 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Frame = -1 Query: 302 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 135 +GPP GPPG SG P AE PG G K T P P G G Sbjct: 1000 MGPPGLAGPPG----------ESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPG 1049 Query: 134 LP 129 P Sbjct: 1050 AP 1051
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 26.6 bits (57), Expect(2) = 5.7 Identities = 24/87 (27%), Positives = 34/87 (39%) Frame = -1 Query: 284 HGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAVNRHI 105 H PP AH P + S PA+P PGL + +LP A P + Sbjct: 969 HHPPSAHPPPLQLMPQSQPLPSSPAQP-PGL----TQSQSLPPPAA---SHPTTGGLHQV 1020 Query: 104 PAREILTRFPFGGCA*SRYLPGLPRPL 24 P++ + PF +PG P P+ Sbjct: 1021 PSQSPFPQHPF--------VPGGPPPI 1039 Score = 20.8 bits (42), Expect(2) = 5.7 Identities = 10/29 (34%), Positives = 11/29 (37%) Frame = -3 Query: 447 PEPSPQSHPFPEVTDPFCRLPLPTLFHWP 361 P P H P T P +LP P P Sbjct: 911 PAPLAMPHIKPPPTTPIPQLPAPQAHKHP 939
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 28.9 bits (63), Expect = 6.3 Identities = 23/76 (30%), Positives = 29/76 (38%) Frame = -1 Query: 296 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 117 PP G G P + G +PP PFPG G +P P G+ P Sbjct: 683 PPPLPGEAGMPPPPPPLPGGPG---IPPPPPFPGGPG-------IPPPPPGMGMPPPPPF 732 Query: 116 NRHIPAREILTRFPFG 69 +PA +L PFG Sbjct: 733 GFGVPAAPVL---PFG 745
>ADA11_MOUSE (Q9R1V4) ADAM 11 precursor (A disintegrin and metalloproteinase| domain 11) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein) (MDC) Length = 773 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +1 Query: 67 PPKGNRVKISRAGM-WRLTATLGSPETPAGASGRVIFSA*RPANPGNGSAGGRVQWPE 237 PP G R + WR +A +GSPE+P G+ P+ S+GG V+ P+ Sbjct: 19 PPPGLGALGPRGALHWRSSAHVGSPESPEGS------EVTEPSRLVRQSSGGEVRKPQ 70
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 28.9 bits (63), Expect = 6.3 Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 2/97 (2%) Frame = -1 Query: 305 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPN 126 ++GPP GP G P + R G LP A+ PG G + LP G S Sbjct: 219 LMGPPGLQGPTGPPGDPGE-RGPPGRPGLPGADGLPGPPG---TMLVLPFRYGGDSSKGP 274 Query: 125 VAVNRHIPAREIL--TRFPFGGCA*SRYLPGLPRPLG 21 + A+ IL R G L G P P+G Sbjct: 275 TVSAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVG 311
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 6.3 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Frame = -1 Query: 302 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 135 +GPP GPPG SG P AE PG G K T P P G G Sbjct: 989 MGPPGLAGPPG----------ESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPG 1038 Query: 134 LP 129 P Sbjct: 1039 AP 1040
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 6.3 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Frame = -1 Query: 302 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 135 +GPP GPPG SG P AE PG G K T P P G G Sbjct: 989 MGPPGLAGPPG----------ESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGAPG 1038 Query: 134 LP 129 P Sbjct: 1039 AP 1040
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 6.3 Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 4/103 (3%) Frame = -1 Query: 305 VLGPPDFHGPPGAHRTPRD--VRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGL 132 V GPP GP GA+ P + + +G P E PGL G E+ G +GL Sbjct: 676 VQGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGNEGPPGLEGMPGER--------GAAGL 727 Query: 131 PNVAVNRHIPAREILTRFPFG--GCA*SRYLPGLPRPLGSAYP 9 P +R P P G G L GL P+G P Sbjct: 728 PGAKGDRGDPG-------PKGADGAPGKDGLRGLTGPIGPPGP 763
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 28.9 bits (63), Expect = 6.3 Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Frame = -1 Query: 302 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEK----ITLPEAPAGVSG 135 +GPP GPPG SG P AE PG G K T P P G G Sbjct: 996 MGPPGLAGPPG----------ESGREGSPGAEGSPGRDGSPGPKGDRGETGPAGPPGAPG 1045 Query: 134 LP 129 P Sbjct: 1046 AP 1047
>TIF1B_MOUSE (Q62318) Transcription intermediary factor 1-beta (TIF1-beta)| (Tripartite motif protein 28) (KRAB-A-interacting protein) (KRIP-1) Length = 834 Score = 28.9 bits (63), Expect = 6.3 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = +2 Query: 212 PEVGSSGRKSTARRAVSGAPPAAHENPEDR---VPFT--PGRTHNRIRSP 346 P G + K A GAPPAA E PE + +P T PG R+ SP Sbjct: 546 PLPGMAIVKEEETEAAIGAPPAAPEGPETKPVLMPLTEGPGAEGPRLASP 595
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 28.9 bits (63), Expect = 6.3 Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 4/102 (3%) Frame = -1 Query: 296 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 117 PP PP R+P R G PP+ PG+A R +I P++P G + N+ Sbjct: 1119 PPQRPPPPSGARSPAPARKEFGGVGAPPS---PGVARR---EIEAPKSP-GTARKDNIGR 1171 Query: 116 NRHIPAREILTRFPFGGCA*SRYLPG----LPRPLGSAYPCA 3 N+ P + P G A +P + P A CA Sbjct: 1172 NQPSPQAGLAGPGPAGYGAARPTIPARAGVISAPQSQARVCA 1213
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 28.9 bits (63), Expect = 6.3 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -1 Query: 305 VLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAG 186 ++GPP GP G P D R G LP A+ PG G Sbjct: 452 IMGPPGLQGPTGPPGDPGD-RGPPGRPGLPGADGLPGPPG 490
>DNAE2_BRUSU (Q8G381) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1077 Score = 28.9 bits (63), Expect = 6.3 Identities = 24/70 (34%), Positives = 28/70 (40%) Frame = -1 Query: 296 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 117 PPD P A R + + G L P G GR AE+I A AGV + V Sbjct: 131 PPDEDEPDFAARLTEIAQAAPGSVWLALTMPHQGQDGRRAERIARFAAQAGVPLIATNDV 190 Query: 116 NRHIPAREIL 87 H P R L Sbjct: 191 LYHHPDRRPL 200
>DNAE2_BRUME (Q8YEK2) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1077 Score = 28.9 bits (63), Expect = 6.3 Identities = 24/70 (34%), Positives = 28/70 (40%) Frame = -1 Query: 296 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 117 PPD P A R + + G L P G GR AE+I A AGV + V Sbjct: 131 PPDEDEPDFAARLTEIAQAAPGSVWLALTMPHQGQDGRRAERIARFAAQAGVPLIATNDV 190 Query: 116 NRHIPAREIL 87 H P R L Sbjct: 191 LYHHPDRRPL 200
>DNAE2_BRUAB (Q57FU7) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1077 Score = 28.9 bits (63), Expect = 6.3 Identities = 24/70 (34%), Positives = 28/70 (40%) Frame = -1 Query: 296 PPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVAV 117 PPD P A R + + G L P G GR AE+I A AGV + V Sbjct: 131 PPDEDEPDFAARLTEIAQAAPGSVWLALTMPHQGQDGRRAERIARFAAQAGVPLIATNDV 190 Query: 116 NRHIPAREIL 87 H P R L Sbjct: 191 LYHHPDRRPL 200
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 26.2 bits (56), Expect(2) = 7.3 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = -1 Query: 284 HGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLPNVA 120 H PP AH P + S PA+P PGL ++ + P A +GL VA Sbjct: 978 HHPPSAHPPPLQLMPQSQPLPSSPAQP-PGLTQ--SQNLPPPPASHPPTGLHQVA 1029 Score = 20.8 bits (42), Expect(2) = 7.3 Identities = 10/29 (34%), Positives = 11/29 (37%) Frame = -3 Query: 447 PEPSPQSHPFPEVTDPFCRLPLPTLFHWP 361 P P H P T P +LP P P Sbjct: 920 PAPLAMPHIKPPPTTPIPQLPAPQAHKHP 948
>OC17_CHICK (Q9PRS8) Ovocleidin-17 (OC-17)| Length = 142 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Frame = +1 Query: 115 LTATLGSPETPAGASGRVIFSA*RPANP-----GNGSAGGRVQWPEEHRTSRGVRCA 270 L A+ G + GA GRV RPA +G+A W + RG RCA Sbjct: 58 LNASRGGDGSGEGADGRVWIGLHRPAGSRSWRWSDGTAPRFASWHRTAKARRGGRCA 114
>MAGD1_PIG (Q6ITT4) Melanoma-associated antigen D1 (MAGE-D1 antigen)| Length = 784 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFP 198 GPPD+ GPP P W LPP P P Sbjct: 400 GPPDWQGPPDWPLPP--------DWPLPPDWPLP 425
>MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1| Length = 2173 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -2 Query: 223 PYLRLNRFQGWQAVKQKR*LFPRPPPASPDFLTSPSTAT 107 P R +R Q W AV+ L P PASP L P+ A+ Sbjct: 1832 PKSRPSRNQRWGAVRADESLTAIPEPASPQLLDIPTHAS 1870
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE 156 GPP GPPG TP + T+ P+ PG+ G EK E Sbjct: 314 GPPGPRGPPGPPGTPGSQGLAGERGTVGPSGE-PGVKGEEGEKAATAE 360
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.5 bits (62), Expect = 8.2 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 5/88 (5%) Frame = -1 Query: 275 PGA--HR-TPRDVRCSSGHWTLPPAEPFPGLAGR*AEKIT--LPEAPAGVSGLPNVAVNR 111 PGA HR TP ++R + T P + A +T LPE PAG L + Sbjct: 1829 PGAEPHRATPAELRAHALPGTRKPHTVVVQMGEGAAGTVTTLLPEEPAGALDLTGMRPES 1888 Query: 110 HIPAREILTRFPFGGCA*SRYLPGLPRP 27 + ++ +FPFG + P P Sbjct: 1889 RLACCDMAYKFPFGSSCTGTFHPAPSAP 1916
>SFTA1_HUMAN (Q8IWL2) Pulmonary surfactant-associated protein A1 precursor| (SP-A1) (SP-A) (PSP-A) (PSPA) (Alveolar proteinosis protein) (35 kDa pulmonary surfactant-associated protein) Length = 248 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = -1 Query: 281 GPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEAPAGVSGLP 129 GPPG P ++ C G+ LP A PG G E G GLP Sbjct: 55 GPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGE-----PGERGPPGLP 100
>GDBX_WHEAT (P21292) Gamma-gliadin precursor| Length = 302 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -3 Query: 435 PQSHPFPEVTDPFCRLPLPTL 373 PQ PFP+ PFC+ P T+ Sbjct: 32 PQQQPFPQPQQPFCQQPQRTI 52
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 28.5 bits (62), Expect = 8.2 Identities = 35/105 (33%), Positives = 41/105 (39%), Gaps = 5/105 (4%) Frame = -1 Query: 308 TVLGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEP-FPGLAGR*AEKITLPEAPAGVSGL 132 T+ GPP G PG+ TP + PP P FPG AG +P P G GL Sbjct: 1652 TIQGPPGEPGRPGSPGTPGEQG--------PPGTPGFPGNAG-------VPGTP-GERGL 1695 Query: 131 PNVAVNRHIPAREILTRFPFG----GCA*SRYLPGLPRPLGSAYP 9 V + P I T+ P G PG P P GS P Sbjct: 1696 TGVKGEKGNPG--IGTQGPRGPPGPAGPSGESRPGSPGPPGSPGP 1738
>COAT_PLRV (P10470) Coat protein| Length = 208 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +3 Query: 267 RPRRPMKIRRTEYRSRPVVLITASG 341 R RR +RR R +PVV++TASG Sbjct: 18 RRRRRQSLRRRANRVQPVVMVTASG 42
>AP2_ARATH (P47927) Floral homeotic protein APETALA2| Length = 432 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = +3 Query: 138 GDAGGGLGKSYLFCLTACQPWKRFSRR*GPVAGRAPHVARCPVRPRRPMKIRRTEYRSR 314 G G +++ F + CQ G AG+A +VA V P +P+K R RSR Sbjct: 74 GGVASGFPRAHWFGVKFCQS----DLATGSSAGKATNVAAAVVEPAQPLKKSRRGPRSR 128
>YDEQ_BACSU (P96674) Putative NAD(P)H oxidoreductase ydeQ (EC 1.6.99.-)| Length = 197 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = +1 Query: 61 AHPPKGNRVKISRAGMWRLTATLGSPETPAGASGRVIFSA*RPANPGNGSA 213 AH P GN++K W ++GSPE A G +FS P SA Sbjct: 91 AHGPGGNKLKGKE---WVTAMSIGSPEHSYQAGGYNLFSISELTKPFQASA 138
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +3 Query: 177 CLTACQPWKRFSRR*GPVAGRAPHVARCPVRPR 275 CL CQ + S R GP R P R P PR Sbjct: 18 CLATCQSLQMGSVRKGPTGDRGPRGQRGPAGPR 50
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.5 bits (62), Expect = 8.2 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPEA-PAGVSG 135 GPP F G PG T +V G LP PG AG E+ T E+ AG SG Sbjct: 556 GPPGFQGLPGPSGTTGEVG-KPGERGLPGEFGLPGPAGPRGERGTPGESGAAGPSG 610
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 28.5 bits (62), Expect = 8.2 Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 1/59 (1%) Frame = -1 Query: 302 LGPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFPGLAGR*AEKITLPE-APAGVSGLP 129 +GPP GPPG SG P AE PG G K E PAG G P Sbjct: 562 MGPPGLAGPPG----------ESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGAPGPP 610
>MAGD1_HUMAN (Q9Y5V3) Melanoma-associated antigen D1 (MAGE-D1 antigen)| (Neurotrophin receptor-interacting MAGE homolog) (MAGE tumor antigen CCF) Length = 778 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -1 Query: 299 GPPDFHGPPGAHRTPRDVRCSSGHWTLPPAEPFP 198 GPPD+ GPP P W LPP P P Sbjct: 394 GPPDWQGPPDWPLPP--------DWPLPPDWPLP 419 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,913,392 Number of Sequences: 219361 Number of extensions: 1895910 Number of successful extensions: 6540 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 5562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6488 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
