Clone Name | bastl06e06 |
---|---|
Clone Library Name | barley_pub |
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 38.5 bits (88), Expect = 0.004 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = +2 Query: 116 CAVGAYADALPEPVNEEVLGLVVFRSALTDPSGALAAWAES-DATPCGWPHVECDPATSR 292 C Y +L +N++ L + L+DP+ +L++W+++ D TPC W V CD ATS Sbjct: 10 CLSSTYLPSLS--LNQDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSCD-ATSN 66 Query: 293 VL 298 V+ Sbjct: 67 VV 68
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 36.2 bits (82), Expect = 0.022 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 158 NEEVLGLVVFRSALTDPSGALAAWAESDATPCGWPHVECDPATS 289 N E L +++L DP+ L +W + TPC W HV C+ S Sbjct: 26 NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNS 69
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 34.7 bits (78), Expect = 0.063 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +2 Query: 206 PSGALAAWAESDATPCGWPHVECD 277 PS +W SD+TPC W VECD Sbjct: 42 PSDITQSWNASDSTPCSWLGVECD 65
>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb| protein) Length = 1030 Score = 30.0 bits (66), Expect = 1.6 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -2 Query: 102 SRRRSTVVGAA--IAS*RCRRGMGWQWDDGNGG 10 SRR+S + A A R RG+ WQW+D +GG Sbjct: 139 SRRKSKKITARGIFAGGRVVRGVDWQWEDQDGG 171
>MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) Length = 1006 Score = 30.0 bits (66), Expect = 1.6 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -2 Query: 102 SRRRSTVVGAA--IAS*RCRRGMGWQWDDGNGG 10 SRR+S + A A R RG+ WQW+D +GG Sbjct: 139 SRRKSKKITARGIFAGARVVRGVDWQWEDQDGG 171
>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2) Length = 1006 Score = 30.0 bits (66), Expect = 1.6 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -2 Query: 102 SRRRSTVVGAA--IAS*RCRRGMGWQWDDGNGG 10 SRR+S + A A R RG+ WQW+D +GG Sbjct: 139 SRRKSKKITARGIFAGARVVRGVDWQWEDQDGG 171
>MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) Length = 1011 Score = 30.0 bits (66), Expect = 1.6 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = -2 Query: 102 SRRRSTVVGAA--IAS*RCRRGMGWQWDDGNGG 10 SRR+S + A A R RG+ WQW+D +GG Sbjct: 139 SRRKSKKITARGIFAGARVVRGVDWQWEDQDGG 171
>KLDC5_HUMAN (Q9P2K6) Kelch domain-containing protein 5| Length = 505 Score = 30.0 bits (66), Expect = 1.6 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = -1 Query: 292 AGGGRVALDVRPA--ARRGVRLGPRGERAGGV 203 A G R+ LD A AR G LGPRGE+ GGV Sbjct: 59 APGLRLVLDFINAGGAREGWLLGPRGEKGGGV 90
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +2 Query: 176 LVVFRSALTDPS-GALAAWAESDATPCGWPHVECDPATSRV 295 L F+S+L++P+ G W+E+ W + CDP + RV Sbjct: 35 LNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRV 75
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +2 Query: 176 LVVFRSALTDPSGALAAWAESDATPCGWPHVECDPATSRV 295 L+ + A DP LA+W +SD C W V CD T+R+ Sbjct: 35 LLQIKKAFGDPY-VLASW-KSDTDCCDWYCVTCDSTTNRI 72
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +2 Query: 176 LVVFRSALTDPSGALAAWAESDATPCGWPHVECDPA 283 L+ + +L +P+ L+ W+ + A C W HV CD A Sbjct: 35 LMRVKQSLGNPA-TLSTWSLASADCCEWDHVRCDEA 69
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/66 (24%), Positives = 23/66 (34%) Frame = -2 Query: 297 STREVAGSHSTCGQPHGVASDSAHAASAPEGSVRAERNXXXXXXXXXXXXXXXXAYAPTA 118 S AG+ ST P +S S + + GS++ E +P Sbjct: 167 SASPTAGASSTATCPASSSSSSGNGSGGKSGSIKQEHTEIHSSSSAISAAAASTVMSPPP 226 Query: 117 QEDTRS 100 E TRS Sbjct: 227 AEATRS 232
>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb| homolog) (D-mib) Length = 1226 Score = 28.9 bits (63), Expect = 3.5 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = -2 Query: 111 DTRSRRRSTVVGAAIAS*RCRRGMGWQWDDGNGGV 7 + R + + + R RG+ WQW+D +GGV Sbjct: 232 EPRRKSKKVLARGIFPGARVVRGVDWQWEDQDGGV 266
>IF2_DESVH (Q72ER1) Translation initiation factor IF-2| Length = 1079 Score = 28.9 bits (63), Expect = 3.5 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = -1 Query: 289 GGGRVALDVRPAARRGVRLGPRGERAGGVRQGGA 188 GG R RP +R P G+R GG R GGA Sbjct: 300 GGQRPEGGYRPEGQREGGYRPEGQREGGYRPGGA 333
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +2 Query: 164 EVLGLVVFRSALTDPSGALAAWAESDATPCGWPHVECDPATSRVLRL 304 ++ ++ + +L PS ++ SD PC W H+ C T RV R+ Sbjct: 28 DLSAMLSLKKSLNPPS----SFGWSDPDPCKWTHIVC-TGTKRVTRI 69
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +2 Query: 155 VNEEVLGLVVFRSALTDPSGALAAW-AESDATPCGWPHVEC 274 ++ E L+ F+ +L +PS L++W S A+ C W V C Sbjct: 23 LSSETTSLISFKRSLENPS-LLSSWNVSSSASHCDWVGVTC 62
>OAT4_HUMAN (Q9NSA0) Solute carrier family 22 member 11 (Organic anion| transporter 4) Length = 550 Score = 27.7 bits (60), Expect = 7.7 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%) Frame = +2 Query: 197 LTDPSGALAAWAESDATPC--GW 259 L DP+ +W+E+D PC GW Sbjct: 95 LLDPNATATSWSEADTEPCVDGW 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.140 0.469 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,011,376 Number of Sequences: 219361 Number of extensions: 446295 Number of successful extensions: 1351 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1301 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1349 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits)