ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 39 0.004
2BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 36 0.022
3RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 35 0.063
4MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (M... 30 1.6
5MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (... 30 1.6
6MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (... 30 1.6
7MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (... 30 1.6
8KLDC5_HUMAN (Q9P2K6) Kelch domain-containing protein 5 30 1.6
9DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100... 30 2.0
10PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor (Polyg... 30 2.0
11PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Po... 30 2.0
12HR4_DROME (Q9W539) Hormone receptor 4 (dHR4) 29 2.6
13MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.... 29 3.5
14IF2_DESVH (Q72ER1) Translation initiation factor IF-2 29 3.5
15TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur... 28 7.7
16EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 28 7.7
17OAT4_HUMAN (Q9NSA0) Solute carrier family 22 member 11 (Organic ... 28 7.7

>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = +2

Query: 116 CAVGAYADALPEPVNEEVLGLVVFRSALTDPSGALAAWAES-DATPCGWPHVECDPATSR 292
           C    Y  +L   +N++   L   +  L+DP+ +L++W+++ D TPC W  V CD ATS 
Sbjct: 10  CLSSTYLPSLS--LNQDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSCD-ATSN 66

Query: 293 VL 298
           V+
Sbjct: 67  VV 68



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 158 NEEVLGLVVFRSALTDPSGALAAWAESDATPCGWPHVECDPATS 289
           N E   L   +++L DP+  L +W  +  TPC W HV C+   S
Sbjct: 26  NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNS 69



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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 34.7 bits (78), Expect = 0.063
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 206 PSGALAAWAESDATPCGWPHVECD 277
           PS    +W  SD+TPC W  VECD
Sbjct: 42  PSDITQSWNASDSTPCSWLGVECD 65



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>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb|
           protein)
          Length = 1030

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 102 SRRRSTVVGAA--IAS*RCRRGMGWQWDDGNGG 10
           SRR+S  + A    A  R  RG+ WQW+D +GG
Sbjct: 139 SRRKSKKITARGIFAGGRVVRGVDWQWEDQDGG 171



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>MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb|
           homolog 1) (DAPK-interacting protein 1) (DIP-1)
          Length = 1006

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 102 SRRRSTVVGAA--IAS*RCRRGMGWQWDDGNGG 10
           SRR+S  + A    A  R  RG+ WQW+D +GG
Sbjct: 139 SRRKSKKITARGIFAGARVVRGVDWQWEDQDGG 171



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>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb|
           homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc
           finger ZZ type with ankyrin repeat domain protein 2)
          Length = 1006

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 102 SRRRSTVVGAA--IAS*RCRRGMGWQWDDGNGG 10
           SRR+S  + A    A  R  RG+ WQW+D +GG
Sbjct: 139 SRRKSKKITARGIFAGARVVRGVDWQWEDQDGG 171



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>MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb|
           homolog 1)
          Length = 1011

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 102 SRRRSTVVGAA--IAS*RCRRGMGWQWDDGNGG 10
           SRR+S  + A    A  R  RG+ WQW+D +GG
Sbjct: 139 SRRKSKKITARGIFAGARVVRGVDWQWEDQDGG 171



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>KLDC5_HUMAN (Q9P2K6) Kelch domain-containing protein 5|
          Length = 505

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -1

Query: 292 AGGGRVALDVRPA--ARRGVRLGPRGERAGGV 203
           A G R+ LD   A  AR G  LGPRGE+ GGV
Sbjct: 59  APGLRLVLDFINAGGAREGWLLGPRGEKGGGV 90



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>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor|
          Length = 372

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 176 LVVFRSALTDPS-GALAAWAESDATPCGWPHVECDPATSRV 295
           L  F+S+L++P+ G    W+E+      W  + CDP + RV
Sbjct: 35  LNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRV 75



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>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor|
           (Polygalacturonase-inhibiting protein)
          Length = 330

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 176 LVVFRSALTDPSGALAAWAESDATPCGWPHVECDPATSRV 295
           L+  + A  DP   LA+W +SD   C W  V CD  T+R+
Sbjct: 35  LLQIKKAFGDPY-VLASW-KSDTDCCDWYCVTCDSTTNRI 72



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>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 176 LVVFRSALTDPSGALAAWAESDATPCGWPHVECDPA 283
           L+  + +L +P+  L+ W+ + A  C W HV CD A
Sbjct: 35  LMRVKQSLGNPA-TLSTWSLASADCCEWDHVRCDEA 69



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>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)|
          Length = 1518

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/66 (24%), Positives = 23/66 (34%)
 Frame = -2

Query: 297 STREVAGSHSTCGQPHGVASDSAHAASAPEGSVRAERNXXXXXXXXXXXXXXXXAYAPTA 118
           S    AG+ ST   P   +S S + +    GS++ E                    +P  
Sbjct: 167 SASPTAGASSTATCPASSSSSSGNGSGGKSGSIKQEHTEIHSSSSAISAAAASTVMSPPP 226

Query: 117 QEDTRS 100
            E TRS
Sbjct: 227 AEATRS 232



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>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb|
           homolog) (D-mib)
          Length = 1226

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 111 DTRSRRRSTVVGAAIAS*RCRRGMGWQWDDGNGGV 7
           + R + +  +        R  RG+ WQW+D +GGV
Sbjct: 232 EPRRKSKKVLARGIFPGARVVRGVDWQWEDQDGGV 266



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>IF2_DESVH (Q72ER1) Translation initiation factor IF-2|
          Length = 1079

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -1

Query: 289 GGGRVALDVRPAARRGVRLGPRGERAGGVRQGGA 188
           GG R     RP  +R     P G+R GG R GGA
Sbjct: 300 GGQRPEGGYRPEGQREGGYRPEGQREGGYRPGGA 333



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>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 164 EVLGLVVFRSALTDPSGALAAWAESDATPCGWPHVECDPATSRVLRL 304
           ++  ++  + +L  PS    ++  SD  PC W H+ C   T RV R+
Sbjct: 28  DLSAMLSLKKSLNPPS----SFGWSDPDPCKWTHIVC-TGTKRVTRI 69



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 155 VNEEVLGLVVFRSALTDPSGALAAW-AESDATPCGWPHVEC 274
           ++ E   L+ F+ +L +PS  L++W   S A+ C W  V C
Sbjct: 23  LSSETTSLISFKRSLENPS-LLSSWNVSSSASHCDWVGVTC 62



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>OAT4_HUMAN (Q9NSA0) Solute carrier family 22 member 11 (Organic anion|
           transporter 4)
          Length = 550

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = +2

Query: 197 LTDPSGALAAWAESDATPC--GW 259
           L DP+    +W+E+D  PC  GW
Sbjct: 95  LLDPNATATSWSEADTEPCVDGW 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.140    0.469 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,011,376
Number of Sequences: 219361
Number of extensions: 446295
Number of successful extensions: 1351
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
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