ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl06e05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469020.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3314 Score = 244 bits (123), Expect = 2e-61 Identities = 168/183 (91%) Strand = Plus / Plus Query: 230 ggcggcggcggacccccgacgcgtccgcaacacgtgcatcctggcgcacgtagaccacgg 289 |||| |||||||||| || || || |||||||||||||||||||||||||| |||||||| Sbjct: 145 ggcgccggcggacccgcggcgggtacgcaacacgtgcatcctggcgcacgtcgaccacgg 204 Query: 290 gaagaccacgctggcggaccacctcgtcgcctcctgcggcgacggcctcctccaccccag 349 ||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||||| || Sbjct: 205 caagacgacgctggccgaccacctcgtcgcctcctgcggggacggcctcgtccacccgag 264 Query: 350 gctcgccggccgcctccgcttcatggactacctcgacgaggagcagcgccgggccatcac 409 |||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 265 gctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcgccatcac 324 Query: 410 cat 412 ||| Sbjct: 325 cat 327
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 244 bits (123), Expect = 2e-61 Identities = 168/183 (91%) Strand = Plus / Plus Query: 230 ggcggcggcggacccccgacgcgtccgcaacacgtgcatcctggcgcacgtagaccacgg 289 |||| |||||||||| || || || |||||||||||||||||||||||||| |||||||| Sbjct: 81151 ggcgccggcggacccgcggcgggtacgcaacacgtgcatcctggcgcacgtcgaccacgg 81210 Query: 290 gaagaccacgctggcggaccacctcgtcgcctcctgcggcgacggcctcctccaccccag 349 ||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||||| || Sbjct: 81211 caagacgacgctggccgaccacctcgtcgcctcctgcggggacggcctcgtccacccgag 81270 Query: 350 gctcgccggccgcctccgcttcatggactacctcgacgaggagcagcgccgggccatcac 409 |||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 81271 gctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcgccatcac 81330 Query: 410 cat 412 ||| Sbjct: 81331 cat 81333
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 244 bits (123), Expect = 2e-61 Identities = 168/183 (91%) Strand = Plus / Plus Query: 230 ggcggcggcggacccccgacgcgtccgcaacacgtgcatcctggcgcacgtagaccacgg 289 |||| |||||||||| || || || |||||||||||||||||||||||||| |||||||| Sbjct: 24964748 ggcgccggcggacccgcggcgggtacgcaacacgtgcatcctggcgcacgtcgaccacgg 24964807 Query: 290 gaagaccacgctggcggaccacctcgtcgcctcctgcggcgacggcctcctccaccccag 349 ||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||||| || Sbjct: 24964808 caagacgacgctggccgaccacctcgtcgcctcctgcggggacggcctcgtccacccgag 24964867 Query: 350 gctcgccggccgcctccgcttcatggactacctcgacgaggagcagcgccgggccatcac 409 |||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 24964868 gctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcgccatcac 24964927 Query: 410 cat 412 ||| Sbjct: 24964928 cat 24964930
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 244 bits (123), Expect = 2e-61 Identities = 168/183 (91%) Strand = Plus / Plus Query: 230 ggcggcggcggacccccgacgcgtccgcaacacgtgcatcctggcgcacgtagaccacgg 289 |||| |||||||||| || || || |||||||||||||||||||||||||| |||||||| Sbjct: 25056023 ggcgccggcggacccgcggcgggtacgcaacacgtgcatcctggcgcacgtcgaccacgg 25056082 Query: 290 gaagaccacgctggcggaccacctcgtcgcctcctgcggcgacggcctcctccaccccag 349 ||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||||| || Sbjct: 25056083 caagacgacgctggccgaccacctcgtcgcctcctgcggggacggcctcgtccacccgag 25056142 Query: 350 gctcgccggccgcctccgcttcatggactacctcgacgaggagcagcgccgggccatcac 409 |||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 25056143 gctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcgccatcac 25056202 Query: 410 cat 412 ||| Sbjct: 25056203 cat 25056205
>dbj|AK102195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087C22, full insert sequence Length = 3314 Score = 244 bits (123), Expect = 2e-61 Identities = 168/183 (91%) Strand = Plus / Plus Query: 230 ggcggcggcggacccccgacgcgtccgcaacacgtgcatcctggcgcacgtagaccacgg 289 |||| |||||||||| || || || |||||||||||||||||||||||||| |||||||| Sbjct: 145 ggcgccggcggacccgcggcgggtacgcaacacgtgcatcctggcgcacgtcgaccacgg 204 Query: 290 gaagaccacgctggcggaccacctcgtcgcctcctgcggcgacggcctcctccaccccag 349 ||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||||| || Sbjct: 205 caagacgacgctggccgaccacctcgtcgcctcctgcggggacggcctcgtccacccgag 264 Query: 350 gctcgccggccgcctccgcttcatggactacctcgacgaggagcagcgccgggccatcac 409 |||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 265 gctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcgccatcac 324 Query: 410 cat 412 ||| Sbjct: 325 cat 327
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 343 accccaggctcgccggccgcctccgcttcatggactacctcgacgaggagcagcgccggg 402 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 525690 acccgaggctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcg 525631 Query: 403 ccatcaccat 412 |||||||||| Sbjct: 525630 ccatcaccat 525621
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 343 accccaggctcgccggccgcctccgcttcatggactacctcgacgaggagcagcgccggg 402 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 525690 acccgaggctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcg 525631 Query: 403 ccatcaccat 412 |||||||||| Sbjct: 525630 ccatcaccat 525621
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Plus Query: 343 accccaggctcgccggccgcctccgcttcatggactacctcgacgaggagcagcgccggg 402 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 44622 acccgaggctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcg 44681 Query: 403 ccatcaccat 412 |||||||||| Sbjct: 44682 ccatcaccat 44691
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 372 atggactacctcgacgaggagcagcgccgggccatcaccat 412 |||||| |||| || ||||||||||| |||||||||||||| Sbjct: 20201256 atggaccacctggaggaggagcagcggcgggccatcaccat 20201216
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 372 atggactacctcgacgaggagcagcgccgggccatcaccat 412 |||||| |||| || ||||||||||| |||||||||||||| Sbjct: 74562 atggaccacctggaggaggagcagcggcgggccatcaccat 74522
>gb|AE010437.1| Methanopyrus kandleri AV19 section 136 of 157 of the complete genome Length = 12131 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 275 gcacgtagaccacgggaagaccacgctg 302 ||||||||||||||| |||||||||||| Sbjct: 4534 gcacgtagaccacggtaagaccacgctg 4561
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 cacgtagaccacgggaagaccac 298 ||||||||||||||||||||||| Sbjct: 2090474 cacgtagaccacgggaagaccac 2090452 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 cacgtagaccacgggaagaccac 298 ||||||||||||||||||||||| Sbjct: 2075029 cacgtagaccacgggaagaccac 2075007
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 276 cacgtagaccacgggaagaccacgctg 302 |||||||||||||| |||||||||||| Sbjct: 5723498 cacgtagaccacggtaagaccacgctg 5723472
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 276 cacgtagaccacgggaagaccacgctg 302 ||||| ||||||||||||||||||||| Sbjct: 1966962 cacgtggaccacgggaagaccacgctg 1966936 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 276 cacgtagaccacgggaagaccacgctg 302 ||||| ||||||||||||||||||||| Sbjct: 699765 cacgtggaccacgggaagaccacgctg 699739
>gb|AF327413.1|AF327413 Oryza sativa translational elongation factor Tu (tufA) gene, complete cds; nuclear gene for chloroplast product Length = 2050 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Plus Query: 276 cacgtagaccacgggaagaccacgctg 302 ||||| ||||||||||||||||||||| Sbjct: 340 cacgtcgaccacgggaagaccacgctg 366
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 46.1 bits (23), Expect = 0.089 Identities = 29/31 (93%) Strand = Plus / Minus Query: 273 gcgcacgtagaccacgggaagaccacgctgg 303 |||||||| |||||||| ||||||||||||| Sbjct: 1207755 gcgcacgtcgaccacggcaagaccacgctgg 1207725
>emb|X68014.1|DMFUSG D.mobilis FUS gene for elongation factor 2 Length = 2342 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 272 ggcgcacgtagaccacgggaagaccacgct 301 ||||||||| |||||||||||||| ||||| Sbjct: 120 ggcgcacgtggaccacgggaagacaacgct 149
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 178 gtcgccgtcgccggcttccttgccgc 203 |||||||||||||||||||| ||||| Sbjct: 874502 gtcgccgtcgccggcttcctcgccgc 874527 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 273 gcgcacgtagaccacgggaagaccacgct 301 |||||||| |||||||| ||||||||||| Sbjct: 817884 gcgcacgtcgaccacggcaagaccacgct 817856
>ref|NM_190739.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1422 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 caacccgtcgccgtcgccggc 192 ||||||||||||||||||||| Sbjct: 987 caacccgtcgccgtcgccggc 967
>gb|AC120989.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0032D15, complete sequence Length = 161968 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 317 cgcctcctgcggcgacggcctcctc 341 ||||||| ||||||||||||||||| Sbjct: 147267 cgcctccagcggcgacggcctcctc 147243
>gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1171_H02, complete sequence Length = 109969 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 317 cgcctcctgcggcgacggcctcctc 341 ||||||| ||||||||||||||||| Sbjct: 18894 cgcctccagcggcgacggcctcctc 18870
>ref|XM_413879.1| PREDICTED: Gallus gallus similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) (LOC415507), mRNA Length = 4443 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 cccaggctcgccggccgcctc 365 ||||||||||||||||||||| Sbjct: 326 cccaggctcgccggccgcctc 346
>gb|BC001633.1| Homo sapiens Tu translation elongation factor, mitochondrial, mRNA (cDNA clone MGC:1592 IMAGE:3536952), complete cds Length = 1634 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 253 gaccacgggaagaccacgctg 273
>gb|BC010041.2| Homo sapiens Tu translation elongation factor, mitochondrial, mRNA (cDNA clone MGC:19753 IMAGE:3629164), complete cds Length = 1627 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 261 gaccacgggaagaccacgctg 281
>ref|NM_003321.3| Homo sapiens Tu translation elongation factor, mitochondrial (TUFM), mRNA Length = 1627 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 261 gaccacgggaagaccacgctg 281
>ref|XM_817456.1| Trypanosoma brucei TREU927 GTP-binding protein (Tb10.70.4600) partial mRNA Length = 2307 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 tggcgcacgtagaccacgggaagac 295 |||| |||||||||||||||||||| Sbjct: 353 tggcacacgtagaccacgggaagac 377
>gb|AC133550.2| Homo sapiens chromosome 16 clone RP11-22P6, complete sequence Length = 58207 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 41891 gaccacgggaagaccacgctg 41911
>emb|X84694.1|HSEFTU H.sapiens mRNA for elongations factor Tu-mitochondrial Length = 1572 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 206 gaccacgggaagaccacgctg 226
>gb|AC010660.6| Drosophila melanogaster 3L BAC RP98-9I16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186795 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 255 cgcaacacgtgcatcctggcgcacgtagaccacgggaagaccacgctggcgga 307 ||||||| |||||||||||||| || ||||| || ||||| || |||||||| Sbjct: 171028 cgcaacatctgcatcctggcgcatgtggaccatggaaagacgactctggcgga 171080
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 276 cacgtagaccacgggaagaccacgctggcggac 308 ||||| |||||||| ||||||||||||| |||| Sbjct: 2737505 cacgtcgaccacggcaagaccacgctggtggac 2737537
>emb|CR621980.1| full-length cDNA clone CS0DJ015YL11 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1505 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 192 gaccacgggaagaccacgctg 212
>emb|CR608035.1| full-length cDNA clone CS0DI007YB10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1534 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 186 gaccacgggaagaccacgctg 206
>emb|CR593603.1| full-length cDNA clone CS0DK011YC01 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1494 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 157 gaccacgggaagaccacgctg 177
>gb|AE012391.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 299 of 460 of the complete genome Length = 11677 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cgtcgccggcttccttgccgc 203 ||||||||||||||||||||| Sbjct: 11021 cgtcgccggcttccttgccgc 11001
>ref|NM_176337.1| Drosophila melanogaster CG33158-RB (CG33158), mRNA Length = 3249 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 255 cgcaacacgtgcatcctggcgcacgtagaccacgggaagaccacgctggcgga 307 ||||||| |||||||||||||| || ||||| || ||||| || |||||||| Sbjct: 58 cgcaacatctgcatcctggcgcatgtggaccatggaaagacgactctggcgga 110
>gb|AE009762.1|AE009762 Pyrobaculum aerophilum strain IM2 section 17 of 201 of the complete genome Length = 13501 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 ctggcgcacgtagaccacgggaagaccac 298 ||||||||||| |||||||| |||||||| Sbjct: 11968 ctggcgcacgtcgaccacggaaagaccac 11940
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 cacctcgtcgcctcctgcggcgacg 333 |||||||||||||||| |||||||| Sbjct: 19884 cacctcgtcgcctcctccggcgacg 19860
>gb|S75463.1| P43=mitochondrial elongation factor homolog [human, liver, mRNA, 1644 nt] Length = 1644 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 299 gaccacgggaagaccacgctg 319
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cgtcgccggcttccttgccgc 203 ||||||||||||||||||||| Sbjct: 1609085 cgtcgccggcttccttgccgc 1609105
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 317 cgcctcctgcggcgacggcctcctc 341 ||||||| ||||||||||||||||| Sbjct: 9036897 cgcctccagcggcgacggcctcctc 9036873
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 caacccgtcgccgtcgccggc 192 ||||||||||||||||||||| Sbjct: 37445204 caacccgtcgccgtcgccggc 37445224
>gb|AC135783.2| Homo sapiens chromosome 16 clone CTD-2555L18, complete sequence Length = 224150 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 35318 gaccacgggaagaccacgctg 35338
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 caacccgtcgccgtcgccggc 192 ||||||||||||||||||||| Sbjct: 39741 caacccgtcgccgtcgccggc 39761
>ref|XM_311881.1| Anopheles gambiae str. PEST ENSANGP00000017548 (ENSANGG00000015059), partial mRNA Length = 2967 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 264 tgcatcctggcgcacgtagaccacgggaagaccacgctggc 304 ||||| ||||| ||||| |||||||| || ||||||||||| Sbjct: 67 tgcattctggcccacgtggaccacggcaaaaccacgctggc 107
>emb|AJ324831.1|HSA324831 Homo sapiens genomic sequence surrounding NotI site, clone NR5-IJ10R Length = 741 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 307 gaccacgggaagaccacgctg 327
>dbj|AK068362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145L16, full insert sequence Length = 1546 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 caacccgtcgccgtcgccggc 192 ||||||||||||||||||||| Sbjct: 1012 caacccgtcgccgtcgccggc 992
>gb|AE003527.3| Drosophila melanogaster chromosome 3L, section 58 of 83 of the complete sequence Length = 279904 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 255 cgcaacacgtgcatcctggcgcacgtagaccacgggaagaccacgctggcgga 307 ||||||| |||||||||||||| || ||||| || ||||| || |||||||| Sbjct: 115652 cgcaacatctgcatcctggcgcatgtggaccatggaaagacgactctggcgga 115704
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 276 cacgtagaccacgggaagaccacgctggcggac 308 ||||| |||||||| ||||||||||||| |||| Sbjct: 1150751 cacgtcgaccacggcaagaccacgctggtggac 1150783
>gb|L38995.1|HUMMTTUF1M Homo sapiens nuclear-encoded mitochondrial elongation factor Tu mRNA, complete cds Length = 1554 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaccacgggaagaccacgctg 302 ||||||||||||||||||||| Sbjct: 206 gaccacgggaagaccacgctg 226
>ref|NM_196020.1| Oryza sativa (japonica cultivar-group) putative RNA helicase (OSJNBb0076H04.8), mRNA Length = 756 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ccaggctcgccggccgcctc 365 |||||||||||||||||||| Sbjct: 92 ccaggctcgccggccgcctc 73
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19, complete sequence Length = 147706 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ccaggctcgccggccgcctc 365 |||||||||||||||||||| Sbjct: 144771 ccaggctcgccggccgcctc 144790
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cccacgccaacccgtcgccg 184 |||||||||||||||||||| Sbjct: 2125534 cccacgccaacccgtcgccg 2125515
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 276 cacgtagaccacgggaagaccacgctgg 303 ||||| |||||||| ||||||||||||| Sbjct: 1695891 cacgtcgaccacggcaagaccacgctgg 1695864
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tggactacctcgacgaggag 392 |||||||||||||||||||| Sbjct: 1585534 tggactacctcgacgaggag 1585515
>ref|XM_415425.1| PREDICTED: Gallus gallus similar to KIAA0649 gene product (LOC417141), mRNA Length = 4632 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tggcggcggcggacccccga 248 |||||||||||||||||||| Sbjct: 544 tggcggcggcggacccccga 525
>ref|XM_414214.1| PREDICTED: Gallus gallus similar to Fanconi anemia group A protein (FACA protein) (LOC415854), mRNA Length = 3061 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 agccgctgccctgccgctgcctgt 137 ||||||||||||| |||||||||| Sbjct: 562 agccgctgccctggcgctgcctgt 585
>gb|AY659217.1| Synthetic construct Peudomonas aeruginosa clone FLH051236.01F PA3840 gene, partial cds Length = 1011 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 377 ctacctcgacgaggagcagcgccgggcc 404 |||||||||| || |||||||||||||| Sbjct: 933 ctacctcgacaagaagcagcgccgggcc 960
>ref|XM_751663.1| Ustilago maydis 521 hypothetical protein (UM00609.1) partial mRNA Length = 2385 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gccgtcgccggcttccttgccgcc 204 ||||||| |||||||||||||||| Sbjct: 561 gccgtcgacggcttccttgccgcc 538
>gb|BC078823.1| Rattus norvegicus plasma membrane proteolipid, mRNA (cDNA clone MGC:93437 IMAGE:7108239), complete cds Length = 1381 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ccctcccctaccccacgccaaccc 177 |||||||||||| ||||||||||| Sbjct: 1019 ccctcccctaccgcacgccaaccc 1042
>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745 Length = 42149 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 cggcgacggcctcctccacc 345 |||||||||||||||||||| Sbjct: 1931 cggcgacggcctcctccacc 1950
>gb|AC136621.2| Homo sapiens chromosome 16 clone RP11-481F24, complete sequence Length = 186021 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tggaccagcctccctcccct 162 |||||||||||||||||||| Sbjct: 119377 tggaccagcctccctcccct 119358
>gb|AC026802.9| Homo sapiens chromosome 16 clone CTD-2545G24, complete sequence Length = 188923 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tggaccagcctccctcccct 162 |||||||||||||||||||| Sbjct: 28724 tggaccagcctccctcccct 28743
>ref|NM_022533.1| Rattus norvegicus plasma membrane proteolipid (Pllp), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ccctcccctaccccacgccaaccc 177 |||||||||||| ||||||||||| Sbjct: 1139 ccctcccctaccgcacgccaaccc 1162
>gb|AC007861.5| Homo sapiens chromosome 16 clone RP11-189E14, complete sequence Length = 175861 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ccctcccctaccccacgcca 173 |||||||||||||||||||| Sbjct: 139980 ccctcccctaccccacgcca 139961
>emb|X61957.1|TTTUFB T.thermophilus HB8 tufB gene for elongation factor Tu Length = 1553 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 gcacgtagaccacgggaagaccacgctg 302 |||||| |||||||||||||| |||||| Sbjct: 129 gcacgtggaccacgggaagacgacgctg 156
>emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene cluster, strain MCIMB 8233 Length = 30837 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cggcgacggcctcctccacc 345 |||||||||||||||||||| Sbjct: 18761 cggcgacggcctcctccacc 18742
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cccacgccaacccgtcgccg 184 |||||||||||||||||||| Sbjct: 49610 cccacgccaacccgtcgccg 49591
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cccacgccaacccgtcgccg 184 |||||||||||||||||||| Sbjct: 204523 cccacgccaacccgtcgccg 204504
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ggctcgccggccgcctccgc 368 |||||||||||||||||||| Sbjct: 281677 ggctcgccggccgcctccgc 281658
>gb|AC007602.6| Homo sapiens chromosome 16 clone RP11-2D4, complete sequence Length = 167094 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tggaccagcctccctcccct 162 |||||||||||||||||||| Sbjct: 95172 tggaccagcctccctcccct 95191
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence Length = 141050 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ccaggctcgccggccgcctc 365 |||||||||||||||||||| Sbjct: 22881 ccaggctcgccggccgcctc 22900
>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds Length = 39237 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cggcgacggcctcctccacc 345 |||||||||||||||||||| Sbjct: 22578 cggcgacggcctcctccacc 22559
>gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, complete sequence Length = 177539 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gcctccctcccctaccccac 169 |||||||||||||||||||| Sbjct: 124464 gcctccctcccctaccccac 124483
>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence Length = 175472 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gcctccctcccctaccccac 169 |||||||||||||||||||| Sbjct: 3345 gcctccctcccctaccccac 3364
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cgggaagaccacgctggcgg 306 |||||||||||||||||||| Sbjct: 2620782 cgggaagaccacgctggcgg 2620801
>gb|AC156641.2| Mus musculus BAC clone RP23-204J8 from chromosome 9, complete sequence Length = 219981 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 agcctccctcccctacccca 168 |||||||||||||||||||| Sbjct: 9676 agcctccctcccctacccca 9657
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 gcacgtagaccacgggaagaccac 298 |||||| ||||||||||||||||| Sbjct: 1802798 gcacgtcgaccacgggaagaccac 1802821
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 310 acctcgtcgcctcctgcggcgacggcctcctccacc 345 ||||| ||||| ||| || ||||||||||||||||| Sbjct: 26162498 acctcctcgccgcctccgacgacggcctcctccacc 26162533
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ccaggctcgccggccgcctc 365 |||||||||||||||||||| Sbjct: 10536080 ccaggctcgccggccgcctc 10536061
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ccaggctcgccggccgcctc 365 |||||||||||||||||||| Sbjct: 19643537 ccaggctcgccggccgcctc 19643556
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccaacccgtcgccgtcgccg 190 |||||||||||||||||||| Sbjct: 24225402 ccaacccgtcgccgtcgccg 24225383
>gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, complete sequence Length = 192347 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ccctcccctaccccacgcca 173 |||||||||||||||||||| Sbjct: 31052 ccctcccctaccccacgcca 31033
>gb|AE004801.1| Pseudomonas aeruginosa PAO1, section 362 of 529 of the complete genome Length = 10450 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 377 ctacctcgacgaggagcagcgccgggcc 404 |||||||||| || |||||||||||||| Sbjct: 7076 ctacctcgacaagaagcagcgccgggcc 7103
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 aggagcagcgccgggccatc 407 |||||||||||||||||||| Sbjct: 5005895 aggagcagcgccgggccatc 5005876
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 275 gcacgtagaccacgggaagaccacgctg 302 |||||| |||||||||||||| |||||| Sbjct: 1592260 gcacgtggaccacgggaagacgacgctg 1592233 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 275 gcacgtagaccacgggaagaccacgctg 302 |||||| |||||||||||||| |||||| Sbjct: 240111 gcacgtggaccacgggaagacgacgctg 240084
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 ctacctcgacgaggagcagcgccg 400 |||||||||||| ||||||||||| Sbjct: 3428971 ctacctcgacgacgagcagcgccg 3428948
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccaacccgtcgccgtcgccg 190 |||||||||||||||||||| Sbjct: 36953 ccaacccgtcgccgtcgccg 36934
>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0042B03 Length = 167669 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ccaggctcgccggccgcctc 365 |||||||||||||||||||| Sbjct: 119097 ccaggctcgccggccgcctc 119116
>emb|X05977.1|TTTUF1 Thermus thermophilus tuf1 gene for elongation factor Tu Length = 1576 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 gcacgtagaccacgggaagaccacgctg 302 |||||| |||||||||||||| |||||| Sbjct: 277 gcacgtggaccacgggaagacgacgctg 304
>emb|X06657.1|TTTUF Thermus thermophilus HB8 tuf gene for elongation factor Tu (EF-Tu) Length = 1578 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 gcacgtagaccacgggaagaccacgctg 302 |||||| |||||||||||||| |||||| Sbjct: 279 gcacgtggaccacgggaagacgacgctg 306
>dbj|AK107784.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-C10, full insert sequence Length = 1042 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 310 acctcgtcgcctcctgcggcgacggcctcctccacc 345 ||||| ||||| ||| || ||||||||||||||||| Sbjct: 115 acctcctcgccgcctccgacgacggcctcctccacc 150
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 276 cacgtagaccacgggaagaccacgctgg 303 ||||| |||||||| ||||||||||||| Sbjct: 1381573 cacgttgaccacggcaagaccacgctgg 1381600
>emb|Z49858.1|RNPLLIPIN Rattus norvegicus mRNA for plasmolipin Length = 1475 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ccctcccctaccccacgccaaccc 177 |||||||||||| ||||||||||| Sbjct: 1139 ccctcccctaccgcacgccaaccc 1162
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgtcgccggcttccttgccg 202 |||||||||||||||||||| Sbjct: 4097875 cgtcgccggcttccttgccg 4097894
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ccaggctcgccggccgcctc 365 |||||||||||||||||||| Sbjct: 10542119 ccaggctcgccggccgcctc 10542100
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cggcgacggcctcctccacc 345 |||||||||||||||||||| Sbjct: 27307 cggcgacggcctcctccacc 27288
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 310 acctcgtcgcctcctgcggcgacggcctcctccacc 345 ||||| ||||| ||| || ||||||||||||||||| Sbjct: 26090674 acctcctcgccgcctccgacgacggcctcctccacc 26090709
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 310 acctcgtcgcctcctgcggcgacggcctcctccacc 345 ||||| ||||| ||| || ||||||||||||||||| Sbjct: 52736 acctcctcgccgcctccgacgacggcctcctccacc 52771
>emb|AL845460.9| Mouse DNA sequence from clone RP23-453H2 on chromosome 2, complete sequence Length = 172295 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tgcctgtccgcttggaccag 150 |||||||||||||||||||| Sbjct: 66442 tgcctgtccgcttggaccag 66423
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 gcacgtagaccacgggaagaccacgctg 302 |||||| |||||||||||||| |||||| Sbjct: 1649969 gcacgtggaccacgggaagacgacgctg 1649996 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 275 gcacgtagaccacgggaagaccacgctg 302 |||||| |||||||||||||| |||||| Sbjct: 1268130 gcacgtggaccacgggaagacgacgctg 1268103
>gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, complete sequence Length = 166760 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agcctccctcccctacccca 168 |||||||||||||||||||| Sbjct: 10585 agcctccctcccctacccca 10604
>gb|U13617.1|RNU13617 Rattus norvegicus Sprague-Dawley plasmolipin mRNA, complete cds Length = 1250 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ccctcccctaccccacgccaaccc 177 |||||||||||| ||||||||||| Sbjct: 912 ccctcccctaccgcacgccaaccc 935
>gb|AC171277.9| Mus musculus 10 BAC RP24-220H23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177194 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ctgtccgcttggaccagcctccct 157 |||||| ||||||||||||||||| Sbjct: 75236 ctgtcctcttggaccagcctccct 75213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,772,641 Number of Sequences: 3902068 Number of extensions: 2772641 Number of successful extensions: 69699 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66918 Number of HSP's gapped (non-prelim): 2781 length of query: 412 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 390 effective length of database: 17,147,199,772 effective search space: 6687407911080 effective search space used: 6687407911080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
