>OC17_CHICK (Q9PRS8) Ovocleidin-17 (OC-17)|
          Length = 142

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = -2

Query: 227 GERGREWSSWLVSRAPLWLAGERARADGRCCRLSDSE*PYGW 102
           G R   WS     R   W    +AR  GRC  L D E    W
Sbjct: 84  GSRSWRWSDGTAPRFASWHRTAKARRGGRCAALRDEEAFTSW 125

>TRUA_PHOPR (Q6LNU5) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 261

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 269 LLRLVGSGVKRALMGERGREWSSWLVSRAPLWLAGERARADG 144
           ++R +   + R   G+   EW  W++ +    +AGE A+A G
Sbjct: 194 MVRNIAGSLIRVGRGQETPEWMKWVLEQKDRRVAGETAKAAG 235

>EVPL_MOUSE (Q9D952) Envoplakin (p210) (210 kDa cornified envelope precursor|
           protein)
          Length = 2035

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = -2

Query: 176 WLAGERARADGRCCRLSDSE*PYGW--GGGVAGLASTPSMLLLLGVP-LEAVARSSR 15
           W +GE     G  C L D+  PY W   G      S P+  L +  P  EAV ++SR
Sbjct: 424 WDSGEVQLLRGERCTLKDNADPYTWLVQGPGGETKSAPAACLWIPAPDPEAVGKASR 480

>TRUA_VIBVY (Q7M7J4) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 264

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 227 GERGREWSSWLVSRAPLWLAGERARADG 144
           GE+  EW  WL+      LAG  A+A+G
Sbjct: 208 GEQDPEWIKWLLEAKDRKLAGPTAKAEG 235

>TRUA_VIBVU (Q8CWK3) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 264

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 227 GERGREWSSWLVSRAPLWLAGERARADG 144
           GE+  EW  WL+      LAG  A+A+G
Sbjct: 208 GEQDPEWIKWLLEAKDRKLAGPTAKAEG 235


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.136    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,903,667
Number of Sequences: 219361
Number of extensions: 750694
Number of successful extensions: 2109
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)