>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,
            aminoalcoholphosphotransferase, putative
            growth-regulating factor 1, putative GAG-POL precursor,
            putative GAG-POL precursor, putative RIRE2 orf3, putative
            anthocyanin regulatory C1, putative protein T30F21.6,
            putative copia polyprotein, putative copia polyprotein,
            putative protein NP_196765.1, and gb protein genes,
            complete cds; and putative zinc finger protein gene,
            partial cds
          Length = 144159

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 104  agccatacggctactcgctgtcactgag 131
            |||||||| |||||||||||||||||||
Sbjct: 8689 agccatacagctactcgctgtcactgag 8662

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 370     accggccatggcgaccacggcgacggc 396
               |||||||||||||| ||||||||||||
Sbjct: 2755442 accggccatggcgagcacggcgacggc 2755416

>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete
             sequence
          Length = 130193

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 379   ggcgaccacggcgacggcggcg 400
             ||||||||||||||||||||||
Sbjct: 25274 ggcgaccacggcgacggcggcg 25253

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 379      ggcgaccacggcgacggcggcg 400
                ||||||||||||||||||||||
Sbjct: 25277434 ggcgaccacggcgacggcggcg 25277455



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 377     atggcgaccacggcgacggcggcg 400
               |||||||| |||||||||||||||
Sbjct: 5721865 atggcgacgacggcgacggcggcg 5721888

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 379      ggcgaccacggcgacggcggcg 400
                ||||||||||||||||||||||
Sbjct: 25368743 ggcgaccacggcgacggcggcg 25368764



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 377     atggcgaccacggcgacggcggcg 400
               |||||||| |||||||||||||||
Sbjct: 5721078 atggcgacgacggcgacggcggcg 5721101

>gb|AF263245.1|AF263245 Micromonospora megalomicea subsp. nigra megalomicin biosynthetic gene
             cluster, partial sequence
          Length = 47981

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 374   gccatggcgaccacggcgacgg 395
             ||||||||||||||||||||||
Sbjct: 13874 gccatggcgaccacggcgacgg 13853

>dbj|AK059150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-B08, full
           insert sequence
          Length = 619

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 379 ggcgaccacggcgacggcggcg 400
           ||||||||||||||||||||||
Sbjct: 234 ggcgaccacggcgacggcggcg 255

>dbj|D26538.1|RICWSI724 Oryza sativa (japonica cultivar-group) mRNA for WSI724 protein
           induced by water stress, complete cds
          Length = 571

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 379 ggcgaccacggcgacggcggcg 400
           ||||||||||||||||||||||
Sbjct: 206 ggcgaccacggcgacggcggcg 227

>gb|AF010584.1|AF010584 Oryza sativa water-stress inducible protein (WSI) mRNA, complete
           cds
          Length = 582

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 379 ggcgaccacggcgacggcggcg 400
           ||||||||||||||||||||||
Sbjct: 190 ggcgaccacggcgacggcggcg 211

>dbj|AB011368.1| Oryza sativa mRNA for LIP5, complete cds
          Length = 596

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 379 ggcgaccacggcgacggcggcg 400
           ||||||||||||||||||||||
Sbjct: 207 ggcgaccacggcgacggcggcg 228

>gb|AY221151.2| Volvariella volvacea clone Cor1 cold-induced gene mRNA, partial
           sequence
          Length = 1046

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 377 atggcgaccacggcgacggcg 397
           |||||||||||||||||||||
Sbjct: 577 atggcgaccacggcgacggcg 557

>emb|AJ719344.1| Gallus gallus mRNA for hypothetical protein, clone 1i13
          Length = 684

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 ctgtcactgagccggcagcag 141
           |||||||||||||||||||||
Sbjct: 85  ctgtcactgagccggcagcag 105

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 379     ggcgaccacggcgacggcggc 399
               |||||||||||||||||||||
Sbjct: 1427257 ggcgaccacggcgacggcggc 1427277

>gb|AC087061.22| Mus musculus strain C57BL/6J chromosome 1 clone rp23-140e19, complete
             sequence
          Length = 202764

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 409   cctcattgcctccctcctcct 429
             |||||||||||||||||||||
Sbjct: 31092 cctcattgcctccctcctcct 31112

>gb|AC074311.28| Mus musculus strain C57BL/6J chromosome 1 clone rp23-157j4, complete
             sequence
          Length = 185871

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 409   cctcattgcctccctcctcct 429
             |||||||||||||||||||||
Sbjct: 63116 cctcattgcctccctcctcct 63096

>emb|AL159992.13| Human DNA sequence from clone RP11-166H7 on chromosome 9q34.13-34.3
             Contains the 5' end of the OLFM1 gene for olfactomedin 1
             and a CpG island, complete sequence
          Length = 73073

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   ccagccagccagagcggagcc 186
             |||||||||||||||||||||
Sbjct: 31641 ccagccagccagagcggagcc 31621

>ref|XM_675883.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7706.2), mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 386 acggcgacggcggcgtacggcgccctca 413
           ||||||||| |||||| |||||||||||
Sbjct: 639 acggcgacgacggcgtccggcgccctca 612

>emb|AL356305.11| Human DNA sequence from clone RP11-109K20 on chromosome 13, complete
             sequence
          Length = 132436

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   ctcattgcctccctcctcct 429
             ||||||||||||||||||||
Sbjct: 33516 ctcattgcctccctcctcct 33497

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     ctctctcggcgtctcccccg 326
               ||||||||||||||||||||
Sbjct: 2331910 ctctctcggcgtctcccccg 2331929

>emb|AL935260.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 9/11
          Length = 298050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   tcggcaccaccggccatggc 381
             ||||||||||||||||||||
Sbjct: 41814 tcggcaccaccggccatggc 41833

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    ggccatggcgaccacggcga 392
              ||||||||||||||||||||
Sbjct: 384191 ggccatggcgaccacggcga 384210

>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 377    atggcgaccacggcgacggcggcg 400
              |||||||| |||||||||||||||
Sbjct: 109306 atggcgacgacggcgacggcggcg 109283

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 369      caccggccatggcgaccacg 388
                ||||||||||||||||||||
Sbjct: 14425244 caccggccatggcgaccacg 14425263

>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   caccggccatggcgaccacg 388
             ||||||||||||||||||||
Sbjct: 18418 caccggccatggcgaccacg 18437

>gb|AC005332.1|AC005332 Homo sapiens chromosome 17, clone hRPK.147_L_13, complete sequence
          Length = 216631

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   actcctagcagcagcagcat 65
            ||||||||||||||||||||
Sbjct: 9558 actcctagcagcagcagcat 9577

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    cgaccacggcgacggcggcg 400
              ||||||||||||||||||||
Sbjct: 767430 cgaccacggcgacggcggcg 767411

>emb|AL714021.12| Mouse DNA sequence from clone RP23-305F20 on chromosome X, complete
              sequence
          Length = 182607

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     tcctagcagcagcagcatac 67
              ||||||||||||||||||||
Sbjct: 118991 tcctagcagcagcagcatac 119010

>gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, complete sequence
          Length = 224088

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    tgtcactgagccggcagcag 141
              ||||||||||||||||||||
Sbjct: 196705 tgtcactgagccggcagcag 196686


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,659,192
Number of Sequences: 3902068
Number of extensions: 3659192
Number of successful extensions: 97564
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96819
Number of HSP's gapped (non-prelim): 745
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)