>PKP3_HUMAN (Q9Y446) Plakophilin-3|
          Length = 797

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 415 LRNLAKNFNQHSKNCRFHSKQSLSKLVAKLPVQIGRREPP 296
           L  L +N +++++N    S + +S L+ KLP  +G + PP
Sbjct: 675 LTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKSPP 714

>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3|
          Length = 944

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
 Frame = +2

Query: 176  AAGDPRFPIALLAVAAGDGDQGTRI-----AAAAYLKIFARRSMEGGLSSSDLYR 325
            AAGDP  P A L +   DGD          A     K   RR   G LS+ DL R
Sbjct: 885  AAGDPAEPTAALPIIRSDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDLLR 939

>TBC2_CHLRE (Q8VXP3) Tbc2 translation factor, chloroplast precursor|
          Length = 1115

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
 Frame = +2

Query: 146  AATAGLDRISAAGDPRFPIALLAVAAGDG----------DQGTRIAAAA 262
            AA AG    +AAGD    ++ +  AAGDG          D GT   AAA
Sbjct: 933  AAPAGASSAAAAGDSPAALSAVPAAAGDGALVPSFMSIDDDGTAAVAAA 981

>VP4_ROTB9 (Q08010) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5]
          Length = 770

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
 Frame = +2

Query: 101 SLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGD-GDQGTRIAAAAYLKIF 277
           S +   LS   TSV  A++     S   +        +VA  D   Q +RIA+   +K F
Sbjct: 558 STITEELSDAATSVSRASSIRSNASVWNNLVDTRTQTSVATNDIATQTSRIASKLRVKEF 617

Query: 278 ARRSMEGGLSSSDLYREFRDQLAQALLRVEPAILRVLI 391
           A ++ EGGLS +D+           +  V+P IL  +I
Sbjct: 618 ATQT-EGGLSFNDISAAVLKTKIDKIETVQPKILPTII 654

>PKP3_MOUSE (Q9QY23) Plakophilin-3|
          Length = 797

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 415 LRNLAKNFNQHSKNCRFHSKQSLSKLVAKLPVQIGRREPP 296
           L  L +N +++++N    S + +S L+ KLP  +G + PP
Sbjct: 675 LTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKCPP 714

>CP6D3_MUSDO (Q964Q7) Cytochrome P450 6d3 (EC 1.14.-.-) (CYPVID3) (Pyrethroid|
           resistance cytochrome P450)
          Length = 520

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +2

Query: 269 KIFARRSMEGGLSSSDLYREFRDQLAQALLRVEPAILRVLIEVFRQV 409
           K+F R+    GL   DLY +F++Q+    L  +PA+L    E+ RQ+
Sbjct: 43  KVF-RKERPFGLVMYDLYEKFQEQVVGIYLFFKPALLIRDAELARQI 88

>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)|
          Length = 3164

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
 Frame = +2

Query: 101  SLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGDGD---QGTRIAAAAYLK 271
            S + A + A +  VDA TA     +AA DP  P+A LA  A       + TR+A  A + 
Sbjct: 1189 STVDAAVRAHRVLVDAVTA---LGAAASDPASPLAFLAAMADSAAGYVKATRLALDARVA 1245

Query: 272  IFARRSMEGGLSSSDLYREFR 334
            I    ++  G +++DL  + R
Sbjct: 1246 IAQLTTL--GSAAADLVVQVR 1264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,947,057
Number of Sequences: 219361
Number of extensions: 544093
Number of successful extensions: 2033
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)