ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06c05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLGB_MAIZE (Q08047) 1,4-alpha-glucan branching enzyme IIB, chlor... 35 0.082
2IBP3_HUMAN (P17936) Insulin-like growth factor-binding protein 3... 32 0.70
3CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel al... 32 0.70
4DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) 32 0.91
5ATPD_SORBI (Q07300) ATP synthase delta chain, chloroplast precur... 32 0.91
6RNPA_THEAQ (Q7X5L4) Ribonuclease P protein component (EC 3.1.26.... 32 1.2
7NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nu... 31 1.6
8SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dep... 31 1.6
9SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dep... 31 2.0
10UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (E... 31 2.0
11VPS54_YEAST (Q12071) Vacuolar protein sorting protein 54 (CPF1 g... 31 2.0
12EX7L_LISMO (Q8Y7C4) Probable exodeoxyribonuclease VII large subu... 31 2.0
13EX7L_LISMF (Q71ZW1) Probable exodeoxyribonuclease VII large subu... 31 2.0
14EX7L_LISIN (Q92BZ3) Probable exodeoxyribonuclease VII large subu... 30 2.7
15MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein) 30 3.5
16CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor... 30 3.5
17CBX4_MOUSE (O55187) Chromobox protein homolog 4 (Polycomb 2 homo... 30 4.5
18VGLB_HSV2S (P24994) Glycoprotein B precursor 30 4.5
19TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome p... 30 4.5
20SOX1_MOUSE (P53783) SOX-1 protein 30 4.5
21SYA_SILPO (Q5LRU1) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 29 5.9
22HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated... 29 5.9
23PSBQ_ONOVI (O22591) Oxygen-evolving enhancer protein 3, chloropl... 29 5.9
24RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin... 29 5.9
25SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-) 29 5.9
26SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-rel... 29 5.9
27HA22I_ARATH (Q8LE10) HVA22-like protein i (AtHVA22i) 29 7.7
28LEUK_RAT (P13838) Leukosialin precursor (Leucocyte sialoglycopro... 29 7.7
29PATR_LEIXX (Q6ABX6) Putative phenylalanine aminotransferase (EC ... 29 7.7
30HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24) 29 7.7
31B3A2_RAT (P23347) Anion exchange protein 2 (Non-erythroid band 3... 29 7.7

>GLGB_MAIZE (Q08047) 1,4-alpha-glucan branching enzyme IIB, chloroplast|
           precursor (EC 2.4.1.18) (Starch branching enzyme IIB)
           (Q-enzyme)
          Length = 799

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
 Frame = +3

Query: 156 FAVSGATLGVA----RAAGGALPRSGSERRGGLDLPSLLLRKKDSSRAVLSCAAAPGKVL 323
           F VSGA LG A    R  GG          G        +    +  A+ + AAA   V+
Sbjct: 3   FRVSGAVLGGAVRAPRLTGGGEGSLVFRHTGLFLTRGARVGCSGTHGAMRAAAAARKAVM 62

Query: 324 VPDGESDDLA----ATPAQPEELQVPEDIEEE 407
           VP+GE+D LA    +   Q +EL+VP DI EE
Sbjct: 63  VPEGENDGLASRADSAQFQSDELEVP-DISEE 93



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>IBP3_HUMAN (P17936) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 291

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 18/80 (22%)
 Frame = +1

Query: 163 CPARPLVWRGPPAERCRDPARSGGAG--WTC------------RRCSSGRRTPLAPS*AA 300
           C AR L    PP   C +  R  G G   TC             RC SG R   +P   A
Sbjct: 43  CDARALAQCAPPPAVCAELVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPD-EA 101

Query: 301 RPLQ----GRSWCLTVRATT 348
           RPLQ    GR  C+   A +
Sbjct: 102 RPLQALLDGRGLCVNASAVS 121



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>CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel alpha-1F subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.4)
          Length = 1985

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
 Frame = +3

Query: 270  KDSSRAVLSCAAAP--GKVLVPDGESDDL------AATPAQPEELQVPEDIEEEMAEVNM 425
            KD  R   S    P   KVLVP GE++D        A P   EE +  E+ EEE  E   
Sbjct: 770  KDKGREKSSEGNPPKENKVLVPGGENEDAKGARSEGAAPGMEEEEEEEEEEEEEEEEEEE 829

Query: 426  TG-GAAEKLESSEPTQGI 476
             G G  E L+   P + +
Sbjct: 830  NGAGHVELLQEVVPKEKV 847



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>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 725

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 327 PDGESDDLAATPAQPEELQVPEDIEEEMAEVNMTGGAAEKLE 452
           P+GE +D  A+ ++ E     ED +EE  +V   G A EK+E
Sbjct: 139 PEGEEEDEDASNSEQESNDEEEDDDEETYDVGDAGDAEEKVE 180



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>ATPD_SORBI (Q07300) ATP synthase delta chain, chloroplast precursor (EC|
           3.6.3.14)
          Length = 247

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
 Frame = +3

Query: 132 LAAREMATFAVSGATLGVARAAGGALP---RSGSERRGGLDLPSLLL----RKKDSSR-- 284
           +AA  +A+F +  A    A A+ GA P   RS S  R    LPSL L    R+ D  R  
Sbjct: 1   MAALRLASFTLRPAAAAAASASSGATPAAPRSASFARAARGLPSLRLAPPRRRGDLVRPR 60

Query: 285 ---AVLSCAAAPGKVLVPDGESDDLAATPAQPEELQVPEDIEE 404
              A  S A+A  +V V +G  +   +   + +++   E + E
Sbjct: 61  AEAAADSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVAE 103



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>RNPA_THEAQ (Q7X5L4) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP|
           protein) (RNase P protein) (Protein C5)
          Length = 162

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = -2

Query: 353 GQVVALTVRHQDLPWSGRAAQDGARGVLLPEEQRRQVQPAPPLRAGSRQRSAGGPRH--- 183
           GQ   L   H+D     RA     +G L P+ Q +++   PP +AG R  S  G R    
Sbjct: 14  GQDPRLPGPHEDPRRQERAEAQAKKGPLAPDAQGKRLGQGPP-KAGGRLLSLKGDRAFQR 72

Query: 182 -TKGRAG 165
             KGRAG
Sbjct: 73  LRKGRAG 79



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>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)|
          Length = 1159

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -1

Query: 171 RRTPRTSPSPAQRASESVAQISLNTPAEMQQRGTRGRPSEGSDGRY*LRSDEKGE 7
           +R P  SPSP     +SVA+ S N P+  Q +   G  S  S     +R  E GE
Sbjct: 203 KRKPSRSPSPMLSKKKSVARASENEPSAKQNKSFSGNDSHKS--LTDIRDKENGE 255



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>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 1 (SWI/SNF complex 155
            kDa subunit) (BRG1-associated factor 155)
          Length = 1105

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
 Frame = +3

Query: 84   AFRPAC*VRSGRPTRSLAAREMATFAVSGATLGVARAAGGALPRSGSERRGGLDLPSLLL 263
            A++P    +SG P  S  A     F  S     VA AA  A     S  R  + L  +  
Sbjct: 682  AYQPVPFSQSGNPVMSTVA-----FLASVVDPRVASAAAKAALEEFSRVREEVPLELVEA 736

Query: 264  RKKDSSRAVLSCAAAPGKVLVPDG-ESDDLAAT-PAQPEELQVPEDIEEEMAEVNMTGGA 437
              K    A    A A GKV    G ES  +A T P +PE+L   E  EEE  E +  G  
Sbjct: 737  HVKKVQEA----ARASGKVDPTYGLESSCIAGTGPDEPEKL---EGAEEEKMEADPDGQQ 789

Query: 438  AEKLES 455
             EK E+
Sbjct: 790  PEKAEN 795



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>SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 1 (SWI/SNF complex 155
            kDa subunit) (BRG1-associated factor 155) (SWI3-related
            protein)
          Length = 1104

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
 Frame = +3

Query: 84   AFRPAC*VRSGRPTRSLAAREMATFAVSGATLGVARAAGGALPRSGSERRGGLDLPSLLL 263
            A++P    +SG P  S  A     F  S     VA AA  A     S  R  + L  +  
Sbjct: 681  AYQPVPFSQSGNPVMSTVA-----FLASVVDPRVASAAAKAALEEFSRVREEVPLELVEA 735

Query: 264  RKKDSSRAVLSCAAAPGKVLVPDG-ESDDLAAT-PAQPEELQVPEDIEEEMAEVNMTGGA 437
              K    A    A A GKV    G ES  +A T P +PE+L   E  EEE  E +  G  
Sbjct: 736  HVKKVQEA----ARASGKVDPTYGLESSCIAGTGPDEPEKL---EGSEEEKMETDPDGQQ 788

Query: 438  AEKLES 455
             EK E+
Sbjct: 789  PEKAEN 794



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>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 42)
            (Ubiquitin-specific-processing protease 42)
            (Deubiquitinating enzyme 42)
          Length = 1325

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 266  PEEQRRQVQPAPPLRAGSRQRSAGGPRHTKGRAGHRERRH 147
            P E+ RQ + AP    G   R + G R + GR  H   RH
Sbjct: 985  PRERDRQDRHAPEHHPGHGDRLSPGERRSLGRCSHHHSRH 1024



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>VPS54_YEAST (Q12071) Vacuolar protein sorting protein 54 (CPF1 genetically|
           interacting protein 1) (Temperature-sensitive clathrin
           synthetic mutation protein 3)
          Length = 889

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = +3

Query: 48  SPHSVGLGFRAAAFRPAC*VRSGRPTRSLAAREMATFAVSGATL---GVARAAGGALPRS 218
           +PH+   G + AA RP   V  G P+R+    +  +F + G T     +   +G   PR 
Sbjct: 6   TPHNKSQGLQKAAGRPKIVVPEGSPSRN---SDSGSFTIEGDTSLNDDLLSISGSVTPR- 61

Query: 219 GSERRGGLDLPSLLLRKKDSSRAV 290
            + R   L L S+  R+   SR +
Sbjct: 62  -ARRSSRLSLDSITPRRSFDSRTL 84



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>EX7L_LISMO (Q8Y7C4) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 450

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
 Frame = +3

Query: 273 DSSRAVLSCAAAPGKVLVPDGESDDLAATPAQPEELQVPE--DIEEEMAE-----VNMTG 431
           DS   V+S         + D  +D  AATP    EL VP+  D+EE +AE     + +T 
Sbjct: 226 DSDVPVISAVGHETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTR 285

Query: 432 GAAEKLESS 458
            A E+ E S
Sbjct: 286 QALERKERS 294



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>EX7L_LISMF (Q71ZW1) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 450

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
 Frame = +3

Query: 273 DSSRAVLSCAAAPGKVLVPDGESDDLAATPAQPEELQVPE--DIEEEMAE-----VNMTG 431
           DS   V+S         + D  +D  AATP    EL VP+  D+EE +AE     + +T 
Sbjct: 226 DSDVPVISAVGHETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTR 285

Query: 432 GAAEKLESS 458
            A E+ E S
Sbjct: 286 QALERKERS 294



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>EX7L_LISIN (Q92BZ3) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 450

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 273 DSSRAVLSCAAAPGKVLVPDGESDDLAATPAQPEELQVPE--DIEEEMAE 416
           DS   V+S         + D  +D  AATP    EL VP+  D+EE +AE
Sbjct: 226 DSDVPVISAVGHETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAE 275



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>MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein)|
          Length = 4910

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
 Frame = +3

Query: 324  VPDGESDDLAATPAQPEELQVPEDI------EEEMAEVNMTGGAAEKLESSE 461
            V D E +DL A   + E L +PED+      EE   +V+M+ G  + L   E
Sbjct: 4235 VKDEEGEDLEANVPEIETLDLPEDMNLDSEHEESDEDVDMSDGMPDDLNKEE 4286



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>CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor 1 precursor|
           (Flamingo homolog 2) (hFmi2)
          Length = 3014

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 22/79 (27%), Positives = 28/79 (35%)
 Frame = +3

Query: 69  GFRAAAFRPAC*VRSGRPTRSLAAREMATFAVSGATLGVARAAGGALPRSGSERRGGLDL 248
           G RA A RP C    G      A RE+      G   G  R +G   P     R      
Sbjct: 38  GTRAFALRPGCTYAVGAACTPRAPRELLDVGRDGRLAGRRRVSGAGRPLPLQVRLVARSA 97

Query: 249 PSLLLRKKDSSRAVLSCAA 305
           P+ L R+  +   +  C A
Sbjct: 98  PTALSRRLRARTHLPGCGA 116



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>CBX4_MOUSE (O55187) Chromobox protein homolog 4 (Polycomb 2 homolog) (Pc2)|
           (MPc2)
          Length = 551

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 38/146 (26%), Positives = 55/146 (37%), Gaps = 10/146 (6%)
 Frame = +3

Query: 9   PPSHRFSINISHHSPHSVGLGFRAAAFRPAC*VRSGRP--TRSLAAREMATFAVSGATLG 182
           PP+H    +  HH  H+VGL    A  R        R    + L AR ++T    G +  
Sbjct: 380 PPAHHHHHHHHHHHHHTVGLNLSHARKRCLSETHGEREPCKKRLTARSISTPTCLGGS-P 438

Query: 183 VARAAGGALPRSGSERRGGLDLPSLLLRKKDSSRAV-LSC------AAAPGKVLVPDGES 341
           V+       P + S     L  P ++L   D    + L C      A  P   L    E+
Sbjct: 439 VSEHPANVSPTAAS-----LPQPEVILLDSDLDEPIDLRCVKMRSDAGEPPSTLQVKPEA 493

Query: 342 DDLAATPA-QPEELQVPEDIEEEMAE 416
             +AA  A  P   + P + +EE  E
Sbjct: 494 PAVAAVVAPAPASEKPPAEAQEEPVE 519



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>VGLB_HSV2S (P24994) Glycoprotein B precursor|
          Length = 885

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +3

Query: 240 LDLPSLLLRKKDSSRAVLSCA--AAPGKVLVPDGESDDLAATPAQPEELQVPEDIEEEMA 413
           L LP LL      + AV++ A  AAP     P     D AATPA PE+ +VP++  E +A
Sbjct: 11  LPLPVLL------ALAVIAAAGRAAPAAAAAPTA---DPAATPALPEDEEVPDEDGEGVA 61



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>TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome protein)|
          Length = 1411

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 308 SGRAAQDGARGVLLPEEQRRQVQPAPPLRAGSRQRSAGGPRHTKGRAGHRE 156
           SG+ +Q GA      E  R+   PAPP +         GP   K +AG RE
Sbjct: 288 SGKTSQVGAASAPAKESPRKGAAPAPPGKT--------GPAVAKAQAGKRE 330



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>SOX1_MOUSE (P53783) SOX-1 protein|
          Length = 391

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 42/150 (28%), Positives = 56/150 (37%), Gaps = 11/150 (7%)
 Frame = +3

Query: 12  PSHRFSINISHHSPHSVGLGFRAAAFRPAC*VRSGRPTRSLAAREMATFAVSGATLGVAR 191
           P HR+ +    +SP S   G+ +A+        SG       A   A  A  GA    A 
Sbjct: 245 PMHRYDMGALQYSPISNSQGYMSAS-------PSGYGGIPYGAAAAAAAAAGGAHQNSAV 297

Query: 192 AAGGALPRSGSERRGGLDLPSLLLRKKDSS--RAVLSCAAAPG------KVLVPDGESDD 347
           AA  A   + S   G L   SL+  +   S      S A  PG       + +P GE  D
Sbjct: 298 AAAAAAAAASSGALGALG--SLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGD 355

Query: 348 ---LAATPAQPEELQVPEDIEEEMAEVNMT 428
               AA  AQ     +P+  +   A VN T
Sbjct: 356 PAAAAAAAAQSRLHSLPQHYQGAGAGVNGT 385



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>SYA_SILPO (Q5LRU1) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 890

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
 Frame = +3

Query: 141 REMATFAVSGATLGVARAAGGALPRSGSERRG--GLDLPSLLLRKKD--SSRAVLSCAAA 308
           R++A    +G   G      G +P       G  G DLP+L+   K    S AVL  A A
Sbjct: 765 RDLAMAGGAGQGGGAETHEVGGVPFLAQVLSGVSGKDLPALIDEHKSRMGSGAVLLIADA 824

Query: 309 PGKVLVPDGESDDLAA 356
            GK  V  G ++DL A
Sbjct: 825 GGKAAVAAGVTEDLTA 840



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>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1203

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +3

Query: 231  RGGLDLPSLLLRKKDSSRAVLSCAAAPGKVLVPDGE-SDDLAATPAQPEELQVPEDIEEE 407
            RGGL LP   L    SSR   S +++PG++  P GE S  LA  P    E   P   E  
Sbjct: 949  RGGLGLPEHFLPPPPSSR---SPSSSPGQLGQPPGELSLGLATGPLSTPETP-PRQPEPP 1004

Query: 408  MAEVNMTGGAA 440
                  +GGA+
Sbjct: 1005 SLVAGASGGAS 1015



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>PSBQ_ONOVI (O22591) Oxygen-evolving enhancer protein 3, chloroplast precursor|
           (OEE3) (16 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 16 kDa subunit)
          Length = 231

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 305 GRAAQDGARGVLLPEEQRRQVQPAPPLRAGSRQRSA 198
           G    D AR + LP ++R  +QP  P  A  RQR +
Sbjct: 101 GTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRES 136



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>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +3

Query: 300 AAAPGKVLVPDGESDDLAATPAQPEELQVPEDIEEEMAEVNMTGGAAEKLESSEPTQGIA 479
           +AAP K  + D  S+ +   PA+PE +   E  E+E         ++ K+E  E  +   
Sbjct: 664 SAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEE 723

Query: 480 ETS 488
           E S
Sbjct: 724 EES 726



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>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)|
          Length = 1772

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 14/65 (21%)
 Frame = +3

Query: 315  KVLVPDGESDDLAATPAQPEELQVPEDIEEEMAEVNM----------TGGAAEKLES--- 455
            K +  D E DD      + EE++V +D EEE A+  +           G A E+++S   
Sbjct: 815  KAIEEDEEEDDAFVIKEEEEEVEVEDDEEEEKADTEVDRKVETVSEAVGEAVEEIKSNGV 874

Query: 456  -SEPT 467
             S+PT
Sbjct: 875  ESKPT 879



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>SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-related sperm|
           protein Spag-1) (TPR-containing protein involved in
           spermatogenesis) (TPIS)
          Length = 901

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 15/103 (14%)
 Frame = +3

Query: 204 ALPRSGSE--RRGGLDLPSLLLRKKDSSRAVLSC-----AAAPGK--------VLVPDGE 338
           AL + G E  R  G+D PS +L   DSS A          A P K        V   DG 
Sbjct: 681 ALAQKGLENCRESGVD-PSQVLLSPDSSEAARHLDTKNDTAPPSKGRERRRIQVQEVDGS 739

Query: 339 SDDLAATPAQPEELQVPEDIEEEMAEVNMTGGAAEKLESSEPT 467
           SD+    PA+      P     +  E   +   AEKL+ S+PT
Sbjct: 740 SDEEPERPAEASATSAPA---RDGVEDGGSAEPAEKLDVSKPT 779



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>HA22I_ARATH (Q8LE10) HVA22-like protein i (AtHVA22i)|
          Length = 296

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +3

Query: 360 PAQPEELQVPEDIEEEMAEVNMTGGAAEKLESSEPTQGIAETS 488
           PA+P++  VP+   EE++  + +  ++ + E +EPT+ ++  S
Sbjct: 164 PAKPKKAPVPQSEPEEVSLSSSSSSSSSENEGNEPTRKVSGPS 206



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>LEUK_RAT (P13838) Leukosialin precursor (Leucocyte sialoglycoprotein)|
           (Sialophorin) (W3/13 antigen) (CD43 antigen) (Fragment)
          Length = 378

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 349 KSSLSPSGTRTFPGAAAQLRTAREESFFLRSSDGKSSPPL 230
           K S+SP G  T P ++  L T    SFF  S+    + P+
Sbjct: 48  KESISPWGQTTAPASSIPLGTPELSSFFFTSAGASGNTPV 87



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>PATR_LEIXX (Q6ABX6) Putative phenylalanine aminotransferase (EC 2.6.1.-)|
          Length = 361

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 180 GVARAAGGALPRSGSERRGGLDLPSLLLRKKDSSRAVLSC 299
           G+A  AG    +  +   GG DLP+L     D +RAV+ C
Sbjct: 112 GLATVAGATSVQVPNRADGGHDLPALAAAITDRTRAVIVC 151



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>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)|
          Length = 488

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 263 EEQRRQVQPAPPLRAGSRQRSAGGPR 186
           ++Q +Q QP PP RAG+ Q  A G R
Sbjct: 130 QQQPQQQQPPPPPRAGALQPPASGTR 155



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>B3A2_RAT (P23347) Anion exchange protein 2 (Non-erythroid band 3-like|
           protein) (AE2 anion exchanger) (Solute carrier family 4
           member 2) (B3RP)
          Length = 1234

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 333 GESDDLAATPAQPEELQVPEDIEEEMAEVNMTGGAAEKLESSEPTQ 470
           GE++   A P QP     P  ++  + E   T   AE+   S PTQ
Sbjct: 132 GEAEGFRAPPQQPSPASSPSAVQFFLQEDEGTDRKAERTSPSPPTQ 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,437,066
Number of Sequences: 219361
Number of extensions: 1201653
Number of successful extensions: 5439
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5436
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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