Clone Name | bastl06c05 |
---|---|
Clone Library Name | barley_pub |
>GLGB_MAIZE (Q08047) 1,4-alpha-glucan branching enzyme IIB, chloroplast| precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) Length = 799 Score = 35.4 bits (80), Expect = 0.082 Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 8/92 (8%) Frame = +3 Query: 156 FAVSGATLGVA----RAAGGALPRSGSERRGGLDLPSLLLRKKDSSRAVLSCAAAPGKVL 323 F VSGA LG A R GG G + + A+ + AAA V+ Sbjct: 3 FRVSGAVLGGAVRAPRLTGGGEGSLVFRHTGLFLTRGARVGCSGTHGAMRAAAAARKAVM 62 Query: 324 VPDGESDDLA----ATPAQPEELQVPEDIEEE 407 VP+GE+D LA + Q +EL+VP DI EE Sbjct: 63 VPEGENDGLASRADSAQFQSDELEVP-DISEE 93
>IBP3_HUMAN (P17936) Insulin-like growth factor-binding protein 3 precursor| (IGFBP-3) (IBP-3) (IGF-binding protein 3) Length = 291 Score = 32.3 bits (72), Expect = 0.70 Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 18/80 (22%) Frame = +1 Query: 163 CPARPLVWRGPPAERCRDPARSGGAG--WTC------------RRCSSGRRTPLAPS*AA 300 C AR L PP C + R G G TC RC SG R +P A Sbjct: 43 CDARALAQCAPPPAVCAELVREPGCGCCLTCALSEGQPCGIYTERCGSGLRCQPSPD-EA 101 Query: 301 RPLQ----GRSWCLTVRATT 348 RPLQ GR C+ A + Sbjct: 102 RPLQALLDGRGLCVNASAVS 121
>CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel alpha-1F subunit| (Voltage-gated calcium channel alpha subunit Cav1.4) Length = 1985 Score = 32.3 bits (72), Expect = 0.70 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Frame = +3 Query: 270 KDSSRAVLSCAAAP--GKVLVPDGESDDL------AATPAQPEELQVPEDIEEEMAEVNM 425 KD R S P KVLVP GE++D A P EE + E+ EEE E Sbjct: 770 KDKGREKSSEGNPPKENKVLVPGGENEDAKGARSEGAAPGMEEEEEEEEEEEEEEEEEEE 829 Query: 426 TG-GAAEKLESSEPTQGI 476 G G E L+ P + + Sbjct: 830 NGAGHVELLQEVVPKEKV 847
>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 725 Score = 32.0 bits (71), Expect = 0.91 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +3 Query: 327 PDGESDDLAATPAQPEELQVPEDIEEEMAEVNMTGGAAEKLE 452 P+GE +D A+ ++ E ED +EE +V G A EK+E Sbjct: 139 PEGEEEDEDASNSEQESNDEEEDDDEETYDVGDAGDAEEKVE 180
>ATPD_SORBI (Q07300) ATP synthase delta chain, chloroplast precursor (EC| 3.6.3.14) Length = 247 Score = 32.0 bits (71), Expect = 0.91 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 12/103 (11%) Frame = +3 Query: 132 LAAREMATFAVSGATLGVARAAGGALP---RSGSERRGGLDLPSLLL----RKKDSSR-- 284 +AA +A+F + A A A+ GA P RS S R LPSL L R+ D R Sbjct: 1 MAALRLASFTLRPAAAAAASASSGATPAAPRSASFARAARGLPSLRLAPPRRRGDLVRPR 60 Query: 285 ---AVLSCAAAPGKVLVPDGESDDLAATPAQPEELQVPEDIEE 404 A S A+A +V V +G + + + +++ E + E Sbjct: 61 AEAAADSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVAE 103
>RNPA_THEAQ (Q7X5L4) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 162 Score = 31.6 bits (70), Expect = 1.2 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Frame = -2 Query: 353 GQVVALTVRHQDLPWSGRAAQDGARGVLLPEEQRRQVQPAPPLRAGSRQRSAGGPRH--- 183 GQ L H+D RA +G L P+ Q +++ PP +AG R S G R Sbjct: 14 GQDPRLPGPHEDPRRQERAEAQAKKGPLAPDAQGKRLGQGPP-KAGGRLLSLKGDRAFQR 72 Query: 182 -TKGRAG 165 KGRAG Sbjct: 73 LRKGRAG 79
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 31.2 bits (69), Expect = 1.6 Identities = 20/55 (36%), Positives = 26/55 (47%) Frame = -1 Query: 171 RRTPRTSPSPAQRASESVAQISLNTPAEMQQRGTRGRPSEGSDGRY*LRSDEKGE 7 +R P SPSP +SVA+ S N P+ Q + G S S +R E GE Sbjct: 203 KRKPSRSPSPMLSKKKSVARASENEPSAKQNKSFSGNDSHKS--LTDIRDKENGE 255
>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) Length = 1105 Score = 31.2 bits (69), Expect = 1.6 Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Frame = +3 Query: 84 AFRPAC*VRSGRPTRSLAAREMATFAVSGATLGVARAAGGALPRSGSERRGGLDLPSLLL 263 A++P +SG P S A F S VA AA A S R + L + Sbjct: 682 AYQPVPFSQSGNPVMSTVA-----FLASVVDPRVASAAAKAALEEFSRVREEVPLELVEA 736 Query: 264 RKKDSSRAVLSCAAAPGKVLVPDG-ESDDLAAT-PAQPEELQVPEDIEEEMAEVNMTGGA 437 K A A A GKV G ES +A T P +PE+L E EEE E + G Sbjct: 737 HVKKVQEA----ARASGKVDPTYGLESSCIAGTGPDEPEKL---EGAEEEKMEADPDGQQ 789 Query: 438 AEKLES 455 EK E+ Sbjct: 790 PEKAEN 795
>SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) (SWI3-related protein) Length = 1104 Score = 30.8 bits (68), Expect = 2.0 Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Frame = +3 Query: 84 AFRPAC*VRSGRPTRSLAAREMATFAVSGATLGVARAAGGALPRSGSERRGGLDLPSLLL 263 A++P +SG P S A F S VA AA A S R + L + Sbjct: 681 AYQPVPFSQSGNPVMSTVA-----FLASVVDPRVASAAAKAALEEFSRVREEVPLELVEA 735 Query: 264 RKKDSSRAVLSCAAAPGKVLVPDG-ESDDLAAT-PAQPEELQVPEDIEEEMAEVNMTGGA 437 K A A A GKV G ES +A T P +PE+L E EEE E + G Sbjct: 736 HVKKVQEA----ARASGKVDPTYGLESSCIAGTGPDEPEKL---EGSEEEKMETDPDGQQ 788 Query: 438 AEKLES 455 EK E+ Sbjct: 789 PEKAEN 794
>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)| (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42) Length = 1325 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -2 Query: 266 PEEQRRQVQPAPPLRAGSRQRSAGGPRHTKGRAGHRERRH 147 P E+ RQ + AP G R + G R + GR H RH Sbjct: 985 PRERDRQDRHAPEHHPGHGDRLSPGERRSLGRCSHHHSRH 1024
>VPS54_YEAST (Q12071) Vacuolar protein sorting protein 54 (CPF1 genetically| interacting protein 1) (Temperature-sensitive clathrin synthetic mutation protein 3) Length = 889 Score = 30.8 bits (68), Expect = 2.0 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Frame = +3 Query: 48 SPHSVGLGFRAAAFRPAC*VRSGRPTRSLAAREMATFAVSGATL---GVARAAGGALPRS 218 +PH+ G + AA RP V G P+R+ + +F + G T + +G PR Sbjct: 6 TPHNKSQGLQKAAGRPKIVVPEGSPSRN---SDSGSFTIEGDTSLNDDLLSISGSVTPR- 61 Query: 219 GSERRGGLDLPSLLLRKKDSSRAV 290 + R L L S+ R+ SR + Sbjct: 62 -ARRSSRLSLDSITPRRSFDSRTL 84
>EX7L_LISMO (Q8Y7C4) Probable exodeoxyribonuclease VII large subunit (EC| 3.1.11.6) (Exonuclease VII large subunit) Length = 450 Score = 30.8 bits (68), Expect = 2.0 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 7/69 (10%) Frame = +3 Query: 273 DSSRAVLSCAAAPGKVLVPDGESDDLAATPAQPEELQVPE--DIEEEMAE-----VNMTG 431 DS V+S + D +D AATP EL VP+ D+EE +AE + +T Sbjct: 226 DSDVPVISAVGHETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTR 285 Query: 432 GAAEKLESS 458 A E+ E S Sbjct: 286 QALERKERS 294
>EX7L_LISMF (Q71ZW1) Probable exodeoxyribonuclease VII large subunit (EC| 3.1.11.6) (Exonuclease VII large subunit) Length = 450 Score = 30.8 bits (68), Expect = 2.0 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 7/69 (10%) Frame = +3 Query: 273 DSSRAVLSCAAAPGKVLVPDGESDDLAATPAQPEELQVPE--DIEEEMAE-----VNMTG 431 DS V+S + D +D AATP EL VP+ D+EE +AE + +T Sbjct: 226 DSDVPVISAVGHETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTR 285 Query: 432 GAAEKLESS 458 A E+ E S Sbjct: 286 QALERKERS 294
>EX7L_LISIN (Q92BZ3) Probable exodeoxyribonuclease VII large subunit (EC| 3.1.11.6) (Exonuclease VII large subunit) Length = 450 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +3 Query: 273 DSSRAVLSCAAAPGKVLVPDGESDDLAATPAQPEELQVPE--DIEEEMAE 416 DS V+S + D +D AATP EL VP+ D+EE +AE Sbjct: 226 DSDVPVISAVGHETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAE 275
>MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein)| Length = 4910 Score = 30.0 bits (66), Expect = 3.5 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Frame = +3 Query: 324 VPDGESDDLAATPAQPEELQVPEDI------EEEMAEVNMTGGAAEKLESSE 461 V D E +DL A + E L +PED+ EE +V+M+ G + L E Sbjct: 4235 VKDEEGEDLEANVPEIETLDLPEDMNLDSEHEESDEDVDMSDGMPDDLNKEE 4286
>CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor 1 precursor| (Flamingo homolog 2) (hFmi2) Length = 3014 Score = 30.0 bits (66), Expect = 3.5 Identities = 22/79 (27%), Positives = 28/79 (35%) Frame = +3 Query: 69 GFRAAAFRPAC*VRSGRPTRSLAAREMATFAVSGATLGVARAAGGALPRSGSERRGGLDL 248 G RA A RP C G A RE+ G G R +G P R Sbjct: 38 GTRAFALRPGCTYAVGAACTPRAPRELLDVGRDGRLAGRRRVSGAGRPLPLQVRLVARSA 97 Query: 249 PSLLLRKKDSSRAVLSCAA 305 P+ L R+ + + C A Sbjct: 98 PTALSRRLRARTHLPGCGA 116
>CBX4_MOUSE (O55187) Chromobox protein homolog 4 (Polycomb 2 homolog) (Pc2)| (MPc2) Length = 551 Score = 29.6 bits (65), Expect = 4.5 Identities = 38/146 (26%), Positives = 55/146 (37%), Gaps = 10/146 (6%) Frame = +3 Query: 9 PPSHRFSINISHHSPHSVGLGFRAAAFRPAC*VRSGRP--TRSLAAREMATFAVSGATLG 182 PP+H + HH H+VGL A R R + L AR ++T G + Sbjct: 380 PPAHHHHHHHHHHHHHTVGLNLSHARKRCLSETHGEREPCKKRLTARSISTPTCLGGS-P 438 Query: 183 VARAAGGALPRSGSERRGGLDLPSLLLRKKDSSRAV-LSC------AAAPGKVLVPDGES 341 V+ P + S L P ++L D + L C A P L E+ Sbjct: 439 VSEHPANVSPTAAS-----LPQPEVILLDSDLDEPIDLRCVKMRSDAGEPPSTLQVKPEA 493 Query: 342 DDLAATPA-QPEELQVPEDIEEEMAE 416 +AA A P + P + +EE E Sbjct: 494 PAVAAVVAPAPASEKPPAEAQEEPVE 519
>VGLB_HSV2S (P24994) Glycoprotein B precursor| Length = 885 Score = 29.6 bits (65), Expect = 4.5 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +3 Query: 240 LDLPSLLLRKKDSSRAVLSCA--AAPGKVLVPDGESDDLAATPAQPEELQVPEDIEEEMA 413 L LP LL + AV++ A AAP P D AATPA PE+ +VP++ E +A Sbjct: 11 LPLPVLL------ALAVIAAAGRAAPAAAAAPTA---DPAATPALPEDEEVPDEDGEGVA 61
>TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome protein)| Length = 1411 Score = 29.6 bits (65), Expect = 4.5 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = -2 Query: 308 SGRAAQDGARGVLLPEEQRRQVQPAPPLRAGSRQRSAGGPRHTKGRAGHRE 156 SG+ +Q GA E R+ PAPP + GP K +AG RE Sbjct: 288 SGKTSQVGAASAPAKESPRKGAAPAPPGKT--------GPAVAKAQAGKRE 330
>SOX1_MOUSE (P53783) SOX-1 protein| Length = 391 Score = 29.6 bits (65), Expect = 4.5 Identities = 42/150 (28%), Positives = 56/150 (37%), Gaps = 11/150 (7%) Frame = +3 Query: 12 PSHRFSINISHHSPHSVGLGFRAAAFRPAC*VRSGRPTRSLAAREMATFAVSGATLGVAR 191 P HR+ + +SP S G+ +A+ SG A A A GA A Sbjct: 245 PMHRYDMGALQYSPISNSQGYMSAS-------PSGYGGIPYGAAAAAAAAAGGAHQNSAV 297 Query: 192 AAGGALPRSGSERRGGLDLPSLLLRKKDSS--RAVLSCAAAPG------KVLVPDGESDD 347 AA A + S G L SL+ + S S A PG + +P GE D Sbjct: 298 AAAAAAAAASSGALGALG--SLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGD 355 Query: 348 ---LAATPAQPEELQVPEDIEEEMAEVNMT 428 AA AQ +P+ + A VN T Sbjct: 356 PAAAAAAAAQSRLHSLPQHYQGAGAGVNGT 385
>SYA_SILPO (Q5LRU1) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 890 Score = 29.3 bits (64), Expect = 5.9 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Frame = +3 Query: 141 REMATFAVSGATLGVARAAGGALPRSGSERRG--GLDLPSLLLRKKD--SSRAVLSCAAA 308 R++A +G G G +P G G DLP+L+ K S AVL A A Sbjct: 765 RDLAMAGGAGQGGGAETHEVGGVPFLAQVLSGVSGKDLPALIDEHKSRMGSGAVLLIADA 824 Query: 309 PGKVLVPDGESDDLAA 356 GK V G ++DL A Sbjct: 825 GGKAAVAAGVTEDLTA 840
>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 Length = 1203 Score = 29.3 bits (64), Expect = 5.9 Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = +3 Query: 231 RGGLDLPSLLLRKKDSSRAVLSCAAAPGKVLVPDGE-SDDLAATPAQPEELQVPEDIEEE 407 RGGL LP L SSR S +++PG++ P GE S LA P E P E Sbjct: 949 RGGLGLPEHFLPPPPSSR---SPSSSPGQLGQPPGELSLGLATGPLSTPETP-PRQPEPP 1004 Query: 408 MAEVNMTGGAA 440 +GGA+ Sbjct: 1005 SLVAGASGGAS 1015
>PSBQ_ONOVI (O22591) Oxygen-evolving enhancer protein 3, chloroplast precursor| (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) Length = 231 Score = 29.3 bits (64), Expect = 5.9 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 Query: 305 GRAAQDGARGVLLPEEQRRQVQPAPPLRAGSRQRSA 198 G D AR + LP ++R +QP P A RQR + Sbjct: 101 GTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRES 136
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 29.3 bits (64), Expect = 5.9 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = +3 Query: 300 AAAPGKVLVPDGESDDLAATPAQPEELQVPEDIEEEMAEVNMTGGAAEKLESSEPTQGIA 479 +AAP K + D S+ + PA+PE + E E+E ++ K+E E + Sbjct: 664 SAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEE 723 Query: 480 ETS 488 E S Sbjct: 724 EES 726
>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)| Length = 1772 Score = 29.3 bits (64), Expect = 5.9 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 14/65 (21%) Frame = +3 Query: 315 KVLVPDGESDDLAATPAQPEELQVPEDIEEEMAEVNM----------TGGAAEKLES--- 455 K + D E DD + EE++V +D EEE A+ + G A E+++S Sbjct: 815 KAIEEDEEEDDAFVIKEEEEEVEVEDDEEEEKADTEVDRKVETVSEAVGEAVEEIKSNGV 874 Query: 456 -SEPT 467 S+PT Sbjct: 875 ESKPT 879
>SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (TPR-containing protein involved in spermatogenesis) (TPIS) Length = 901 Score = 29.3 bits (64), Expect = 5.9 Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 15/103 (14%) Frame = +3 Query: 204 ALPRSGSE--RRGGLDLPSLLLRKKDSSRAVLSC-----AAAPGK--------VLVPDGE 338 AL + G E R G+D PS +L DSS A A P K V DG Sbjct: 681 ALAQKGLENCRESGVD-PSQVLLSPDSSEAARHLDTKNDTAPPSKGRERRRIQVQEVDGS 739 Query: 339 SDDLAATPAQPEELQVPEDIEEEMAEVNMTGGAAEKLESSEPT 467 SD+ PA+ P + E + AEKL+ S+PT Sbjct: 740 SDEEPERPAEASATSAPA---RDGVEDGGSAEPAEKLDVSKPT 779
>HA22I_ARATH (Q8LE10) HVA22-like protein i (AtHVA22i)| Length = 296 Score = 28.9 bits (63), Expect = 7.7 Identities = 12/43 (27%), Positives = 27/43 (62%) Frame = +3 Query: 360 PAQPEELQVPEDIEEEMAEVNMTGGAAEKLESSEPTQGIAETS 488 PA+P++ VP+ EE++ + + ++ + E +EPT+ ++ S Sbjct: 164 PAKPKKAPVPQSEPEEVSLSSSSSSSSSENEGNEPTRKVSGPS 206
>LEUK_RAT (P13838) Leukosialin precursor (Leucocyte sialoglycoprotein)| (Sialophorin) (W3/13 antigen) (CD43 antigen) (Fragment) Length = 378 Score = 28.9 bits (63), Expect = 7.7 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -3 Query: 349 KSSLSPSGTRTFPGAAAQLRTAREESFFLRSSDGKSSPPL 230 K S+SP G T P ++ L T SFF S+ + P+ Sbjct: 48 KESISPWGQTTAPASSIPLGTPELSSFFFTSAGASGNTPV 87
>PATR_LEIXX (Q6ABX6) Putative phenylalanine aminotransferase (EC 2.6.1.-)| Length = 361 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 180 GVARAAGGALPRSGSERRGGLDLPSLLLRKKDSSRAVLSC 299 G+A AG + + GG DLP+L D +RAV+ C Sbjct: 112 GLATVAGATSVQVPNRADGGHDLPALAAAITDRTRAVIVC 151
>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)| Length = 488 Score = 28.9 bits (63), Expect = 7.7 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -2 Query: 263 EEQRRQVQPAPPLRAGSRQRSAGGPR 186 ++Q +Q QP PP RAG+ Q A G R Sbjct: 130 QQQPQQQQPPPPPRAGALQPPASGTR 155
>B3A2_RAT (P23347) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1234 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +3 Query: 333 GESDDLAATPAQPEELQVPEDIEEEMAEVNMTGGAAEKLESSEPTQ 470 GE++ A P QP P ++ + E T AE+ S PTQ Sbjct: 132 GEAEGFRAPPQQPSPASSPSAVQFFLQEDEGTDRKAERTSPSPPTQ 177 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,437,066 Number of Sequences: 219361 Number of extensions: 1201653 Number of successful extensions: 5439 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5436 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)