ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF064562.1|AF064562 Hordeum vulgare cultivar Bomi starch bran... 511 e-142
2emb|Y11282.1|TASBA2 T.aestivum mRNA for starch branching enzyme II 482 e-133
3gb|AF286319.1| Triticum aestivum starch branching enzyme 2 (Sbe2... 474 e-130
4gb|BT008928.1| Triticum aestivum clone wde1f.pk002.g8:fis, full ... 458 e-126
5gb|U66376.1|TAU66376 Triticum aestivum 1,4-alpha-D-glucan 6-alph... 383 e-103
6gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme... 218 1e-53
7gb|AF338432.1|AF338432 Triticum aestivum starch branching enzyme... 141 2e-30
8gb|AF064560.1|AF064560 Hordeum vulgare cultivar Bomi starch bran... 113 6e-22
9dbj|AB023498.1| Oryza sativa mRNA for starch branching enzyme rb... 92 2e-15
10gb|AY357072.1| Triticum aestivum cultivar Yumai-18 starch branch... 82 2e-12
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
12gb|AY109521.1| Zea mays CL1245_1 mRNA sequence 60 7e-06
13gb|U65948.1|ZMU65948 Zea mays starch branching enzyme IIa (Sbe2a... 60 7e-06
14gb|AF228486.1|AF228486 Zea mays starch branching enzyme 2a gene,... 48 0.027
15ref|XM_477110.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.42
16gb|AF215629.2| Crypteronia paniculata chloroplast rpl16 gene, in... 44 0.42
17emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 44 0.42
18emb|AJ605109.1| Dactylocladus stenostachys chloroplast rpl16 gen... 44 0.42
19emb|AJ605108.1| Crypteronia griffithii chloroplast rpl16 gene fo... 44 0.42
20emb|AJ605107.1| Axinandra zeylanica chloroplast rpl16 gene for r... 44 0.42
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
22gb|AY151597.1| Crypteronia paniculata rpl16 gene, intron; chloro... 44 0.42
23dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
24dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
25emb|AM086752.1| Senna holwayana var. holwayana chloroplast rpL16... 44 0.42
26ref|XM_849137.1| PREDICTED: Canis familiaris similar to Adapter-... 42 1.7
27gb|AF086815.2|AF086815 Acidovorax avenae subsp. citrulli s-triaz... 42 1.7
28gb|AF342826.1|AF342826 Enterobacter cloacae plasmid pPDL12 s-tri... 42 1.7
29ref|NM_111873.2| Arabidopsis thaliana SEC8 AT3G10380 (SEC8) mRNA... 40 6.6
30gb|U49941.1| Caenorhabditis elegans cosmid K10B3, complete sequence 40 6.6
31ref|NM_152825.1| Mus musculus ubiquitin specific petidase 45 (Us... 40 6.6
32gb|BC027768.1| Mus musculus ubiquitin specific petidase 45, mRNA... 40 6.6
33ref|XM_977993.1| PREDICTED: Mus musculus ubiquitin specific peti... 40 6.6
34ref|XM_978026.1| PREDICTED: Mus musculus ubiquitin specific peti... 40 6.6
35ref|XM_978062.1| PREDICTED: Mus musculus ubiquitin specific peti... 40 6.6
36gb|BT011118.1| Drosophila melanogaster LD13710 full insert cDNA 40 6.6
37gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC... 40 6.6
38ref|XM_499716.1| Yarrowia lipolytica CLIB122, YALI0A03091g predi... 40 6.6
39gb|AY059763.1| Arabidopsis thaliana unknown protein (At3g10380) ... 40 6.6
40emb|AJ010348.1|FRU010348 Fugu rubripes UBE1-like gene, PRGFR2 ge... 40 6.6
41ref|NM_165320.1| Drosophila melanogaster CG10722-RB, transcript ... 40 6.6
42ref|NM_136181.1| Drosophila melanogaster CG10722-RA, transcript ... 40 6.6
43emb|AJ616913.1| Sordaria macrospora pro40 gene for putative sign... 40 6.6
44gb|AC093044.1| Drosophila melanogaster, chromosome 2L, region 38... 40 6.6
45dbj|AK088073.1| Mus musculus 2 days neonate thymus thymic cells ... 40 6.6
46dbj|AK019756.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.6
47dbj|AK036903.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 6.6
48gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome... 40 6.6
49dbj|AB062136.1| Streptomyces halstedii PDK1 gene for phospholipa... 40 6.6
50dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.6
51gb|AC141209.11| Mus musculus chromosome 3, clone RP23-199M5, com... 40 6.6
52dbj|AK118541.1| Arabidopsis thaliana At3g10380 mRNA for unknown ... 40 6.6
53gb|AF130408.1|AF130408 Streptomyces viridosporus strain T7A cell... 40 6.6
54gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74... 40 6.6
55gb|AC078897.20| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 6.6
56gb|AY553215.2| Nicotiana tabacum hexokinase 2 (Hxk2) mRNA, compl... 40 6.6
57gb|AC004364.1|AC004364 Drosophila melanogaster DNA sequence (P1 ... 40 6.6
58emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 6.6
59emb|AL772187.6| Mouse DNA sequence from clone RP23-38K18 on chro... 40 6.6 
>gb|AF064562.1|AF064562 Hordeum vulgare cultivar Bomi starch branching enzyme IIa (sbeIIa)
           gene, nuclear gene encoding plastid protein, partial cds
          Length = 1852

 Score =  511 bits (258), Expect = e-142
 Identities = 277/283 (97%), Gaps = 1/283 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acgttgctcccccttctcatcgcttctcaattaatatctcccatcactcccctcactcgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 acgttgctcccccttctcatcgcttctcaattaatatctcccatcactcccctcactcgg 268

                                                                       
Query: 61  tcggcctcgggttccgcgctgctgcatttcggccggcgtgttgagtgagatctgggcgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcggcctcgggttccgcgctgctgcatttcggccggcgtgttgagtgagatctgggcgac 328

                                                                       
Query: 121 cgactcgctcgctcgctgcgcgggagatggcgacgttcgcggtgtccggcgcgacccttg 180
           |||||||||||| | ||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 329 cgactcgctcgc-ctctgcgcgggadntggcgacgttcgcggtgtccggcgcgacccttg 387

                                                                       
Query: 181 gtgtggcgcgggccgccggcggagcgctgccgcgatccggctcggagcggaggggcgggc 240
           |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 388 gtgtggcgcgggccgccggcggaaggctgccgcgatccggctcggagcggaggggcgggc 447

                                                      
Query: 241 tggacttgccgtcgctgctcctcaggaagaaggactcctctcg 283
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tggacttgccgtcgctgctcctcaggaagaaggactcctctcg 490



 Score =  176 bits (89), Expect = 4e-41
 Identities = 103/105 (98%), Gaps = 2/105 (1%)
 Strand = Plus / Plus

                                                                       
Query: 283 gcgccgtcctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcg 342
           |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 818 gcgccgtcctga-ctgcgcggccgctccagggaaggtcctggtgc-tgacggtgagagcg 875

                                                        
Query: 343 acgacttggccgccactccagcgcaacctgaagaattacaggtac 387
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 acgacttggccgccactccagcgcaacctgaagaattacaggtac 920



 Score =  165 bits (83), Expect = 2e-37
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                        
Query: 382  aggtacctgaagatatcgaggaggaaatggcggaagtaaacatgacannnnnnnctgcag 441
            |||||||||||||||||||||||||||||||||||||||||||||||       ||||||
Sbjct: 1191 aggtacctgaagatatcgaggaggaaatggcggaagtaaacatgacagggggggctgcag 1250

                                                        
Query: 442  aaaaacttgaatcttcagaaccgactcagggtattgcggaaaca 485
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 aaaaacttgaatcttcagaaccgactcagggtattgcggaaaca 1294
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>emb|Y11282.1|TASBA2 T.aestivum mRNA for starch branching enzyme II
          Length = 2970

 Score =  482 bits (243), Expect = e-133
 Identities = 385/433 (88%), Gaps = 20/433 (4%)
 Strand = Plus / Plus

                                                                       
Query: 66  ctcgggttccgcgctgctgcatttcggccggcgtgttgagtgagatctgggc----gacc 121
           |||||||||||||||||   ||||||||||||| ||||||||||||||||||    ||||
Sbjct: 70  ctcgggttccgcgctgc---atttcggccggcgggttgagtgagatctgggccactgacc 126

                                                                       
Query: 122 gactcgctcgctcgctgcgcgggagatggcgacgttcgcggtgtccggcgcgacccttgg 181
           ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 127 gactcactcgctcgctgcgcggg-gatggcgacgttcgcggtgtccggcgcgaccctcgg 185

                                                                       
Query: 182 tgtggcgcgggccgccgg---------cggagcgctgccgcgatccggctcggagcggag 232
           |||||||||| |||||||         ||||  |||||||||||||||||||||||||||
Sbjct: 186 tgtggcgcggcccgccggcgccggcggcggactgctgccgcgatccggctcggagcggag 245

                                                                       
Query: 233 gggcgggctggacttgccgtcgctgctcctcaggaagaaggactcctctcgcgccgtcct 292
           ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gggcggggtggacctgccgtcgctgctcctcaggaagaaggactcctctcgcgccgtcct 305

                                                                       
Query: 293 gagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcgacgacttggc 352
           |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gagccgcgcggcctctccagggaaggtcctggtgcctgacggtgagagcgacgacttggc 365

                                                                       
Query: 353 cgccactccagcgcaacctgaagaattacaggtacctgaagatatcgaggaggaaatggc 412
               | ||| ||||||||||||||||||||| |||||||||| ||||||||| ||| |||
Sbjct: 366 a---agtccggcgcaacctgaagaattacagatacctgaagacatcgaggagcaaacggc 422

                                                                       
Query: 413 ggaagtaaacatgacannnnnnnctgcagaaaaacttgaatcttcagaaccgactcaggg 472
            |||||||||||||||       |||||||||||||||||||||||||||||||||| ||
Sbjct: 423 tgaagtaaacatgacaggggggactgcagaaaaacttgaatcttcagaaccgactcaagg 482

                        
Query: 473 tattgcggaaaca 485
            |||| |||||||
Sbjct: 483 cattgtggaaaca 495



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                   
Query: 1  acgttgctcccccttctcatcgcttctcaattaatatctcc 41
          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 acgttgctcccccttctcatcgcttctcaattaatatctcc 65
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>gb|AF286319.1| Triticum aestivum starch branching enzyme 2 (Sbe2) mRNA, complete
           cds
          Length = 2970

 Score =  474 bits (239), Expect = e-130
 Identities = 384/433 (88%), Gaps = 20/433 (4%)
 Strand = Plus / Plus

                                                                       
Query: 66  ctcgggttccgcgctgctgcatttcggccggcgtgttgagtgagatctgggc----gacc 121
           |||||||||||||||||   ||||||||||||| ||||||||||||||||||    ||||
Sbjct: 68  ctcgggttccgcgctgc---atttcggccggcgggttgagtgagatctgggccactgacc 124

                                                                       
Query: 122 gactcgctcgctcgctgcgcgggagatggcgacgttcgcggtgtccggcgcgacccttgg 181
           ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 125 gactcactcgctcgctgcgcggg-gatggcgacgttcgcggtgtccggcgcgaccctcgg 183

                                                                       
Query: 182 tgtggcgcgggccgccgg---------cggagcgctgccgcgatccggctcggagcggag 232
           |||||||||| |||||||         ||||  |||||||||||||||||||||||||||
Sbjct: 184 tgtggcgcggcccgccggcgccggcggcggactgctgccgcgatccggctcggagcggag 243

                                                                       
Query: 233 gggcgggctggacttgccgtcgctgctcctcaggaagaaggactcctctcgcgccgtcct 292
           ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gggcggggtggacctgccgtcgctgctcctcaggaagaaggactcctctcgcgccgtcct 303

                                                                       
Query: 293 gagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcgacgacttggc 352
           |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gagccgcgcggcctctccagggaaggtcctggtgcctgacggtgagagcgacgacttggc 363

                                                                       
Query: 353 cgccactccagcgcaacctgaagaattacaggtacctgaagatatcgaggaggaaatggc 412
               | ||| ||||||||||||||||||||| |||||||||| ||||||||| ||| |||
Sbjct: 364 a---agtccggcgcaacctgaagaattacagatacctgaagacatcgaggagcaaacggc 420

                                                                       
Query: 413 ggaagtaaacatgacannnnnnnctgcagaaaaacttgaatcttcagaaccgactcaggg 472
            |||||||||||||||       ||||||||||||||||||| |||||||||||||| ||
Sbjct: 421 tgaagtaaacatgacaggggggactgcagaaaaacttgaatcctcagaaccgactcaagg 480

                        
Query: 473 tattgcggaaaca 485
            |||| |||||||
Sbjct: 481 cattgtggaaaca 493



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                   
Query: 1  acgttgctcccccttctcatcgcttctcaattaatatctcc 41
          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 acgttgctcccccttctcatcgcttctcaattaatatctcc 63
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>gb|BT008928.1| Triticum aestivum clone wde1f.pk002.g8:fis, full insert mRNA
           sequence
          Length = 2549

 Score =  458 bits (231), Expect = e-126
 Identities = 347/387 (89%), Gaps = 7/387 (1%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtgagatctgggcgaccgactcgctcgctcgctgcgcgggagatggcgacgttcgcggtg 164
           ||||||||||||| || |||   ||| ||||||||||||| |||||||||||||||||||
Sbjct: 1   gtgagatctgggccactgaccgactcactcgctgcgcggg-gatggcgacgttcgcggtg 59

                                                                       
Query: 165 tccggcgcgacccttggtgtggcgcgggccgcc------ggcggagcgctgccgcgatcc 218
           |||||||||||||| |||||||||||| |||||      ||||| |  |||| |||||||
Sbjct: 60  tccggcgcgaccctcggtgtggcgcggcccgccagcgccggcggcggactgctgcgatcc 119

                                                                       
Query: 219 ggctcggagcggaggggcgggctggacttgccgtcgctgctcctcaggaagaaggactcc 278
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ggctcggagcggaggggcggggtggacttgccgtcgctgctcctcaggaagaaggactcc 179

                                                                       
Query: 279 tctcgcgccgtcctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgag 338
           |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 180 tctcgcgccgtcctgagccgcgcggcctctccagggaaggtcctggtgcctgacggtgag 239

                                                                       
Query: 339 agcgacgacttggccgccactccagcgcaacctgaagaattacaggtacctgaagatatc 398
           |||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 240 agcgacgacttggcggccactccagcgcaacccgaagaattacagatacctgaagatatc 299

                                                                       
Query: 399 gaggaggaaatggcggaagtaaacatgacannnnnnnctgcagaaaaacttgaatcttca 458
           |||||| ||| ||| ||||| |||||||||       | ||||| |||||||||||||||
Sbjct: 300 gaggagcaaacggctgaagtgaacatgacaggggggaccgcagagaaacttgaatcttca 359

                                      
Query: 459 gaaccgactcagggtattgcggaaaca 485
           |||||||||||||| |||| |||||||
Sbjct: 360 gaaccgactcagggcattgtggaaaca 386
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>gb|U66376.1|TAU66376 Triticum aestivum 1,4-alpha-D-glucan
           6-alpha-D-(1,4-alpha-D-glucanotransferase mRNA, complete
           cds
          Length = 2853

 Score =  383 bits (193), Expect = e-103
 Identities = 336/382 (87%), Gaps = 8/382 (2%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtgagatctgggcgaccgactcgctcgctcgctgcgcgggagatggcgacgtt-cgcggt 163
           |||||||||||||||| | ||  |||  || || |||||| |||||||||||| ||||||
Sbjct: 1   gtgagatctgggcgactggctgactcaatcactacgcggg-gatggcgacgtttcgcggt 59

                                                                       
Query: 164 gtccggcgcgacccttggtgtggcgcgggccgccggcggagcgctgccgcgatccggctc 223
           |||||||||||| || |||||||||||||||| || |||||   || ||||  |||||||
Sbjct: 60  gtccggcgcgactctcggtgtggcgcgggccggcgtcggag---tggcgcgggccggctc 116

                                                                       
Query: 224 ggagcggaggggcgggctggacttgccgtcgctgctcctcaggaagaaggactcctctcg 283
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ggagcggaggggcggggcggacttgccgtcgctgctcctcaggaagaaggactcctctcg 176

                                                                       
Query: 284 cgccgtcctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcga 343
           ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 177 cgccgtcctgagccgcgcggcctctccagggaaggtcctggtgcctgacggcgagagcga 236

                                                                       
Query: 344 cgacttggccgccactccagcgcaacctgaagaattacaggtacctgaagatatcgagga 403
           |||||||||    | ||| ||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 237 cgacttggca---agtccggcgcaacctgaagaattacagatacctgaagatatccagga 293

                                                                       
Query: 404 ggaaatggcggaagtaaacatgacannnnnnnctgcagaaaaacttgaatcttcagaacc 463
           | ||| ||||||||| |||||||||       |||||||||||||| |||||||||||||
Sbjct: 294 gcaaacggcggaagtgaacatgacaggggggactgcagaaaaacttcaatcttcagaacc 353

                                 
Query: 464 gactcagggtattgcggaaaca 485
           ||||||||| |||| |||||||
Sbjct: 354 gactcagggcattgtggaaaca 375
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>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds
          Length = 11475

 Score =  218 bits (110), Expect = 1e-53
 Identities = 193/218 (88%), Gaps = 7/218 (3%)
 Strand = Plus / Plus

                                                                        
Query: 66   ctcgggttccgcgctgctgcatttcggccggcgtgttgagtgagatctgggcgaccgact 125
            |||||||||||||||||   ||||||||||||| ||||||||||||||||||||| | ||
Sbjct: 1127 ctcgggttccgcgctgc---atttcggccggcgggttgagtgagatctgggcgactggct 1183

                                                                        
Query: 126  cgctcgctcgctgcgcgggagatggcgacgttcgcggtgtccggcgcgacccttggtgtg 185
              |||  || || |||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct: 1184 gactcaatcactacgcggg-gatggcgacgttcgcggtgtccggcgcgactctcggtgtg 1242

                                                                        
Query: 186  gcgcgggccgccggcggagcgctgccgcgatccggctcggagcggaggggcgggctggac 245
            |||||||||| || |||||   || ||||  |||||||||||||||||||||||  ||||
Sbjct: 1243 gcgcgggccggcgtcggag---tggcgcgggccggctcggagcggaggggcggggcggac 1299

                                                  
Query: 246  ttgccgtcgctgctcctcaggaagaaggactcctctcg 283
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 ttgccgtcgctgctcctcaggaagaaggactcctctcg 1337



 Score =  133 bits (67), Expect = 6e-28
 Identities = 96/105 (91%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                        
Query: 283  gcgccgtcctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcg 342
            |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 1664 gcgccgtcctgagccgcgcggcctctccagggaaggtcctggtgcctgacggcgagagcg 1723

                                                         
Query: 343  acgacttggccgccactccagcgcaacctgaagaattacaggtac 387
            ||||||||||    | ||| |||||||||||||||||||||||||
Sbjct: 1724 acgacttggca---agtccggcgcaacctgaagaattacaggtac 1765



 Score =  103 bits (52), Expect = 5e-19
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                        
Query: 385  tacctgaagatatcgaggaggaaatggcggaagtaaacatgacannnnnnnctgcagaaa 444
            |||||||||||||||||||| ||| ||||||||| |||||||||       ||||||| |
Sbjct: 2039 tacctgaagatatcgaggagcaaacggcggaagtgaacatgacaggggggactgcagaga 2098

                                                     
Query: 445  aacttgaatcttcagaaccgactcagggtattgcggaaaca 485
            ||||| |||||||||||||||||||||| |||| |||||||
Sbjct: 2099 aacttcaatcttcagaaccgactcagggcattgtggaaaca 2139



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                     
Query: 1    acgttgctcccccttctcatcgcttctcaattaatatctcc 41
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 acgttgctcccccttctcatcgcttctcaattaatatctcc 1122
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>gb|AF338432.1|AF338432 Triticum aestivum starch branching enzyme IIa variant mRNA,
           complete cds
          Length = 2726

 Score =  141 bits (71), Expect = 2e-30
 Identities = 114/126 (90%), Gaps = 8/126 (6%)
 Strand = Plus / Plus

                                                                       
Query: 81  gctgcatttcggccggcgtgttgagtgagatctgggc----gaccgactcgctcgctcgc 136
           |||||||||||||||||| ||||||||||||||||||    ||||||||| |||||||||
Sbjct: 57  gctgcatttcggccggcgggttgagtgagatctgggccactgaccgactcactcgctcgc 116

                                                                       
Query: 137 tgcgcgggagatggcgacgttcgcggtgtccggcgcgacccttggtgtggcgcgggccgc 196
           |||| ||   |||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 117 tgcgggg---atggcgacgttcgcggtgtccggcgcgaccctcggtgtggcgc-ggccgc 172

                 
Query: 197 cggcgg 202
           ||||||
Sbjct: 173 cggcgg 178



 Score =  139 bits (70), Expect = 1e-29
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                       
Query: 363 gcgcaacctgaagaattacaggtacctgaagatatcgaggaggaaatggcggaagtaaac 422
           ||||||||||||||||||||| |||||||||| ||||||||| ||| ||| |||||||||
Sbjct: 181 gcgcaacctgaagaattacagatacctgaagacatcgaggagcaaacggctgaagtaaac 240

                                                                       
Query: 423 atgacannnnnnnctgcagaaaaacttgaatcttcagaaccgactcagggtattgcggaa 482
           ||||||       |||||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 241 atgacaggggggactgcagaaaaacttgaatcttcagaaccgactcaaggcattgtggaa 300

              
Query: 483 aca 485
           |||
Sbjct: 301 aca 303



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                   
Query: 1  acgttgctcccccttctcatcgcttctcaattaatatctcc 41
          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  acgttgctcccccttctcatcgcttctcaattaatatctcc 41
to top
>gb|AF064560.1|AF064560 Hordeum vulgare cultivar Bomi starch branching enzyme IIa (sbeIIa)
           mRNA, nuclear gene encoding plastid protein, complete
           cds
          Length = 2554

 Score =  113 bits (57), Expect = 6e-22
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                       
Query: 408 atggcggaagtaaacatgacannnnnnnctgcagaaaaacttgaatcttcagaaccgact 467
           |||||||||||||||||||||       ||||||||||||||||||||||||||||||||
Sbjct: 7   atggcggaagtaaacatgacagggggggctgcagaaaaacttgaatcttcagaaccgact 66

                             
Query: 468 cagggtattgcggaaaca 485
           ||||||||||||||||||
Sbjct: 67  cagggtattgcggaaaca 84
to top
>dbj|AB023498.1| Oryza sativa mRNA for starch branching enzyme rbe4, complete cds
          Length = 3015

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 102/120 (85%), Gaps = 3/120 (2%)
 Strand = Plus / Plus

                                                                       
Query: 234 ggcgggctggacttgccgtcgctgctcctcaggaagaaggactcct---ctcgcgccgtc 290
           |||||| |||||||||||||| ||||| |||||| |||||||||||   | || | ||| 
Sbjct: 219 ggcggggtggacttgccgtcggtgctcttcaggaggaaggactccttctcacgtggcgtt 278

                                                                       
Query: 291 ctgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcgacgacttg 350
            ||||||||||||  ||||| |||||||| |||||||||| ||||| |||||||||||||
Sbjct: 279 gtgagctgcgcgggtgctcctgggaaggtgctggtgcctggcggtgggagcgacgacttg 338



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 141 cgggagatggcgacgttcgcggtgtccggcgcga 174
           |||| ||||||| |||||||||||||||||||||
Sbjct: 123 cgggggatggcgtcgttcgcggtgtccggcgcga 156
to top
>gb|AY357072.1| Triticum aestivum cultivar Yumai-18 starch branching enzyme IIa
            (SbeIIa) gene, promoter region and partial cds
          Length = 3094

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                     
Query: 1    acgttgctcccccttctcatcgcttctcaattaatatctcc 41
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2970 acgttgctcccccttctcatcgcttctcaattaatatctcc 3010



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 51/55 (92%), Gaps = 3/55 (5%)
 Strand = Plus / Plus

                                                                   
Query: 66   ctcgggttccgcgctgctgcatttcggccggcgtgttgagtgagatctgggcgac 120
            |||||||||||||||||   ||||||||||||| |||||||||||||||||||||
Sbjct: 3015 ctcgggttccgcgctgc---atttcggccggcgggttgagtgagatctgggcgac 3066
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 292      tgagctgcgcggccgctccagggaaggtcctggtgcctgacggtgagagcgacgacttg 350
                ||||||||||||  ||||| |||||||| |||||||||| ||||| |||||||||||||
Sbjct: 20251877 tgagctgcgcgggtgctcctgggaaggtgctggtgcctggcggtgggagcgacgacttg 20251819



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 234      ggcgggctggacttgccgtcgctgctcctcaggaagaaggactcct 279
                |||||| |||||||||||||| ||||| |||||| |||||||||||
Sbjct: 20252427 ggcggggtggacttgccgtcggtgctcttcaggaggaaggactcct 20252382



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 141      cgggagatggcgacgttcgcggtgtccggcgcga 174
                |||| ||||||| |||||||||||||||||||||
Sbjct: 20252523 cgggggatggcgtcgttcgcggtgtccggcgcga 20252490



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 9        cccccttctcatcgcttctcaattaatatctc 40
                |||||||||| ||||||||| |||||||||||
Sbjct: 20252711 cccccttctcctcgcttctcgattaatatctc 20252680
to top
>gb|AY109521.1| Zea mays CL1245_1 mRNA sequence
          Length = 2766

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 77/92 (83%), Gaps = 3/92 (3%)
 Strand = Plus / Plus

                                                                       
Query: 242 ggacttgccgtcgctgctcctcaggaagaaggac---tcctctcgcgccgtcctgagctg 298
           ||||||||||||| ||||| |||||| |||||||   | ||||||| |||| ||||||||
Sbjct: 1   ggacttgccgtcggtgctcttcaggaggaaggacgctttctctcgcaccgttctgagctg 60

                                           
Query: 299 cgcggccgctccagggaaggtcctggtgcctg 330
           ||| |  ||||| || ||||| ||||||||||
Sbjct: 61  cgctggtgctcctggaaaggtactggtgcctg 92



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 366 caacctgaagaattacaggtacctgaag 393
           |||||||||||| ||||| |||||||||
Sbjct: 143 caacctgaagaactacagatacctgaag 170
to top
>gb|U65948.1|ZMU65948 Zea mays starch branching enzyme IIa (Sbe2a) mRNA, partial cds
          Length = 2795

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 77/92 (83%), Gaps = 3/92 (3%)
 Strand = Plus / Plus

                                                                       
Query: 242 ggacttgccgtcgctgctcctcaggaagaaggac---tcctctcgcgccgtcctgagctg 298
           ||||||||||||| ||||| |||||| |||||||   | ||||||| |||| ||||||||
Sbjct: 1   ggacttgccgtcggtgctcttcaggaggaaggacgctttctctcgcaccgttctgagctg 60

                                           
Query: 299 cgcggccgctccagggaaggtcctggtgcctg 330
           ||| |  ||||| || ||||| ||||||||||
Sbjct: 61  cgctggtgctcctggaaaggtactggtgcctg 92



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 366 caacctgaagaattacaggtacctgaag 393
           |||||||||||| ||||| |||||||||
Sbjct: 143 caacctgaagaactacagatacctgaag 170
to top
>gb|AF228486.1|AF228486 Zea mays starch branching enzyme 2a gene, partial cds
          Length = 4668

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                
Query: 224  ggagcggaggggcgggctggacttgccgtcgctgctcctcaggaagaaggac 275
            |||||||||| | | | |||||||||||||| ||||| |||||| |||||||
Sbjct: 3924 ggagcggaggagtgcggtggacttgccgtcggtgctcttcaggaggaaggac 3975



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 146  gatggcgacgttcgcggtgtccggcgcga 174
            ||||||| ||||||| |||||||||||||
Sbjct: 3852 gatggcgtcgttcgctgtgtccggcgcga 3880
to top
>ref|XM_477110.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 516

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 47  ctcccctcactcggtcggcctc 68
           ||||||||||||||||||||||
Sbjct: 373 ctcccctcactcggtcggcctc 352
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>gb|AF215629.2| Crypteronia paniculata chloroplast rpl16 gene, intron sequence
          Length = 735

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 14  ttctcatcgcttctcaattaat 35
           ||||||||||||||||||||||
Sbjct: 622 ttctcatcgcttctcaattaat 643
to top
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 192    gccgccggcggagcgctgccgc 213
              ||||||||||||||||||||||
Sbjct: 188495 gccgccggcggagcgctgccgc 188516
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>emb|AJ605109.1| Dactylocladus stenostachys chloroplast rpl16 gene for ribosomal
           protein L16, intron
          Length = 1159

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  ttctcatcgcttctcaattaat 35
           ||||||||||||||||||||||
Sbjct: 493 ttctcatcgcttctcaattaat 472
to top
>emb|AJ605108.1| Crypteronia griffithii chloroplast rpl16 gene for ribosomal protein
           L16, intron
          Length = 1141

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  ttctcatcgcttctcaattaat 35
           ||||||||||||||||||||||
Sbjct: 490 ttctcatcgcttctcaattaat 469
to top
>emb|AJ605107.1| Axinandra zeylanica chloroplast rpl16 gene for ribosomal protein
           L16, intron
          Length = 1078

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  ttctcatcgcttctcaattaat 35
           ||||||||||||||||||||||
Sbjct: 516 ttctcatcgcttctcaattaat 495
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 47      ctcccctcactcggtcggcctc 68
               ||||||||||||||||||||||
Sbjct: 5955527 ctcccctcactcggtcggcctc 5955548
to top
>gb|AY151597.1| Crypteronia paniculata rpl16 gene, intron; chloroplast gene for
           chloroplast product
          Length = 962

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  ttctcatcgcttctcaattaat 35
           ||||||||||||||||||||||
Sbjct: 467 ttctcatcgcttctcaattaat 446
to top
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0008C11
          Length = 157205

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 47    ctcccctcactcggtcggcctc 68
             ||||||||||||||||||||||
Sbjct: 10697 ctcccctcactcggtcggcctc 10718
to top
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 47    ctcccctcactcggtcggcctc 68
             ||||||||||||||||||||||
Sbjct: 97975 ctcccctcactcggtcggcctc 97996
to top
>emb|AM086752.1| Senna holwayana var. holwayana chloroplast rpL16 gene, partial
           intron
          Length = 797

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 14  ttctcatcgcttctcaattaat 35
           ||||||||||||||||||||||
Sbjct: 416 ttctcatcgcttctcaattaat 437
to top
>ref|XM_849137.1| PREDICTED: Canis familiaris similar to Adapter-related protein
           complex 1 sigma 1B subunit (Sigma-adaptin 1B) (Adaptor
           protein complex AP-1 sigma-1B subunit) (Golgi adaptor
           HA1/AP1 adaptin sigma-1B subunit) (Clathrin assembly
           protein complex 1 sigma-1B small chain) (Sigma 1B s...
           (LOC611468), mRNA
          Length = 1520

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 225 gagcggaggggcgggctggac 245
           |||||||||||||||||||||
Sbjct: 420 gagcggaggggcgggctggac 400
to top
>gb|AF086815.2|AF086815 Acidovorax avenae subsp. citrulli s-triazine ring-cleavage gene region
          Length = 24123

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    ccggcgtgttgagtgagatct 113
             |||||||||||||||||||||
Sbjct: 14980 ccggcgtgttgagtgagatct 15000
to top
>gb|AF342826.1|AF342826 Enterobacter cloacae plasmid pPDL12 s-triazine ring-cleavage gene
             region
          Length = 22210

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    ccggcgtgttgagtgagatct 113
             |||||||||||||||||||||
Sbjct: 16784 ccggcgtgttgagtgagatct 16804
to top
>ref|NM_111873.2| Arabidopsis thaliana SEC8 AT3G10380 (SEC8) mRNA, complete cds
          Length = 3739

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   gcgctgctgcatttcggccg 95
            ||||||||||||||||||||
Sbjct: 2193 gcgctgctgcatttcggccg 2212
to top
>gb|U49941.1| Caenorhabditis elegans cosmid K10B3, complete sequence
          Length = 32464

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   cttctcatcgcttctcaatt 32
            ||||||||||||||||||||
Sbjct: 8531 cttctcatcgcttctcaatt 8550
to top
>ref|NM_152825.1| Mus musculus ubiquitin specific petidase 45 (Usp45), mRNA
          Length = 4004

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  cgaggaggaaatggcggaag 417
            ||||||||||||||||||||
Sbjct: 1691 cgaggaggaaatggcggaag 1710
to top
>gb|BC027768.1| Mus musculus ubiquitin specific petidase 45, mRNA (cDNA clone
            MGC:38578 IMAGE:5354502), complete cds
          Length = 4004

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  cgaggaggaaatggcggaag 417
            ||||||||||||||||||||
Sbjct: 1691 cgaggaggaaatggcggaag 1710
to top
>ref|XM_977993.1| PREDICTED: Mus musculus ubiquitin specific petidase 45, transcript
            variant 7 (Usp45), mRNA
          Length = 5790

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  cgaggaggaaatggcggaag 417
            ||||||||||||||||||||
Sbjct: 1550 cgaggaggaaatggcggaag 1569
to top
>ref|XM_978026.1| PREDICTED: Mus musculus ubiquitin specific petidase 45, transcript
            variant 5 (Usp45), mRNA
          Length = 7124

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  cgaggaggaaatggcggaag 417
            ||||||||||||||||||||
Sbjct: 2884 cgaggaggaaatggcggaag 2903
to top
>ref|XM_978062.1| PREDICTED: Mus musculus ubiquitin specific petidase 45, transcript
            variant 8 (Usp45), mRNA
          Length = 5950

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  cgaggaggaaatggcggaag 417
            ||||||||||||||||||||
Sbjct: 1710 cgaggaggaaatggcggaag 1729
to top
>gb|BT011118.1| Drosophila melanogaster LD13710 full insert cDNA
          Length = 1934

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 tcgctgctcctcaggaagaa 271
           ||||||||||||||||||||
Sbjct: 870 tcgctgctcctcaggaagaa 889
to top
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
            complete sequence
          Length = 87937

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   gcgctgctgcatttcggccg 95
            ||||||||||||||||||||
Sbjct: 7814 gcgctgctgcatttcggccg 7833
to top
>ref|XM_499716.1| Yarrowia lipolytica CLIB122, YALI0A03091g predicted mRNA
          Length = 1506

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 aacctgaagaattacaggta 386
           ||||||||||||||||||||
Sbjct: 558 aacctgaagaattacaggta 539
to top
>gb|AY059763.1| Arabidopsis thaliana unknown protein (At3g10380) mRNA, complete cds
          Length = 3702

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   gcgctgctgcatttcggccg 95
            ||||||||||||||||||||
Sbjct: 2193 gcgctgctgcatttcggccg 2212
to top
>emb|AJ010348.1|FRU010348 Fugu rubripes UBE1-like gene, PRGFR2 gene and gene encoding
           calmodulin binding protein kinase, clone 168J21
          Length = 39850

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 2   cgttgctcccccttctcatc 21
           ||||||||||||||||||||
Sbjct: 419 cgttgctcccccttctcatc 400
to top
>ref|NM_165320.1| Drosophila melanogaster CG10722-RB, transcript variant B (CG10722),
            mRNA
          Length = 2073

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  tcgctgctcctcaggaagaa 271
            ||||||||||||||||||||
Sbjct: 1028 tcgctgctcctcaggaagaa 1047
to top
>ref|NM_136181.1| Drosophila melanogaster CG10722-RA, transcript variant A (CG10722),
            mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  tcgctgctcctcaggaagaa 271
            ||||||||||||||||||||
Sbjct: 1097 tcgctgctcctcaggaagaa 1116
to top
>emb|AJ616913.1| Sordaria macrospora pro40 gene for putative signalling cascade
            component, exons 1-2
          Length = 6002

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  ttgccgtcgctgctcctcag 265
            ||||||||||||||||||||
Sbjct: 1894 ttgccgtcgctgctcctcag 1913
to top
>gb|AC093044.1| Drosophila melanogaster, chromosome 2L, region 38A-38B, BAC clone
              BACR10H13, complete sequence
          Length = 165585

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    tcgctgctcctcaggaagaa 271
              ||||||||||||||||||||
Sbjct: 121558 tcgctgctcctcaggaagaa 121577
to top
>dbj|AK088073.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430003E23
            product:hypothetical Ubiquitin carboxyl-terminal
            hydrolase family 2 containing protein, full insert
            sequence
          Length = 2623

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  cgaggaggaaatggcggaag 417
            ||||||||||||||||||||
Sbjct: 1547 cgaggaggaaatggcggaag 1566
to top
>dbj|AK019756.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930550B20 product:Hypothetical ubiquitin
            carboxyl-terminal hydrolase family 2 containing protein
            homolog [Mus musculus], full insert sequence
          Length = 2623

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  cgaggaggaaatggcggaag 417
            ||||||||||||||||||||
Sbjct: 1823 cgaggaggaaatggcggaag 1842
to top
>dbj|AK036903.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
           library, clone:9930022L12 product:hypothetical Ubiquitin
           carboxyl-terminal hydrolase family 2 containing protein,
           full insert sequence
          Length = 4422

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 398 cgaggaggaaatggcggaag 417
           ||||||||||||||||||||
Sbjct: 124 cgaggaggaaatggcggaag 143
to top
>gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome 9, complete sequence
          Length = 179606

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    aaaaacttgaatcttcagaa 461
              ||||||||||||||||||||
Sbjct: 141070 aaaaacttgaatcttcagaa 141089
to top
>dbj|AB062136.1| Streptomyces halstedii PDK1 gene for phospholipase D, complete cds
          Length = 1726

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  gtcctgagctgcgcggccgc 307
            ||||||||||||||||||||
Sbjct: 1647 gtcctgagctgcgcggccgc 1628
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 141     cgggagatggcgacgttcgcggtg 164
               |||| |||||||||||||||||||
Sbjct: 2727097 cgggcgatggcgacgttcgcggtg 2727120
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>gb|AC141209.11| Mus musculus chromosome 3, clone RP23-199M5, complete sequence
          Length = 192274

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    caggaagaaggactcctctc 282
              ||||||||||||||||||||
Sbjct: 179141 caggaagaaggactcctctc 179122
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>dbj|AK118541.1| Arabidopsis thaliana At3g10380 mRNA for unknown protein, complete
            cds, clone: RAFL19-76-O19
          Length = 3699

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   gcgctgctgcatttcggccg 95
            ||||||||||||||||||||
Sbjct: 2193 gcgctgctgcatttcggccg 2212
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>gb|AF130408.1|AF130408 Streptomyces viridosporus strain T7A cellulase (celS1) mRNA,
           complete cds
          Length = 1311

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 190 gggccgccggcggagcgctgccgc 213
           ||||||||||||||||||| ||||
Sbjct: 130 gggccgccggcggagcgcttccgc 107
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>gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74 of 83 of the complete
             sequence
          Length = 157875

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   tcgctgctcctcaggaagaa 271
             ||||||||||||||||||||
Sbjct: 96889 tcgctgctcctcaggaagaa 96908
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>gb|AC078897.20| Mus musculus strain C57BL/6J chromosome 3 clone rp23-105k2, complete
              sequence
          Length = 200088

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    caggaagaaggactcctctc 282
              ||||||||||||||||||||
Sbjct: 188231 caggaagaaggactcctctc 188250
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>gb|AY553215.2| Nicotiana tabacum hexokinase 2 (Hxk2) mRNA, complete cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 gcgggctggacttgccgtcg 254
           ||||||||||||||||||||
Sbjct: 526 gcgggctggacttgccgtcg 545
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>gb|AC004364.1|AC004364 Drosophila melanogaster DNA sequence (P1 DS00863 (D58)), complete
             sequence
          Length = 78857

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   tcgctgctcctcaggaagaa 271
             ||||||||||||||||||||
Sbjct: 52591 tcgctgctcctcaggaagaa 52610
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    aacctgaagaattacaggta 386
              ||||||||||||||||||||
Sbjct: 359078 aacctgaagaattacaggta 359059
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>emb|AL772187.6| Mouse DNA sequence from clone RP23-38K18 on chromosome 4, complete
              sequence
          Length = 230409

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    cgaggaggaaatggcggaag 417
              ||||||||||||||||||||
Sbjct: 107824 cgaggaggaaatggcggaag 107843


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,068,054
Number of Sequences: 3902068
Number of extensions: 3068054
Number of successful extensions: 63076
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62760
Number of HSP's gapped (non-prelim): 290
length of query: 489
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 467
effective length of database: 17,147,199,772
effective search space: 8007742293524
effective search space used: 8007742293524
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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