ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL670231.7| Mouse DNA sequence from clone RP23-329G7 on chro... 46 0.087
2gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, com... 44 0.34
3gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosom... 44 0.34
4gb|AC072023.9| Homo sapiens 3 BAC RP11-3J2 (Roswell Park Cancer ... 44 0.34
5gb|AC122747.11| Mus musculus chromosome 9, clone RP23-217J11, co... 44 0.34
6gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 ma... 42 1.4
7gb|AC149235.1| Pan troglodytes chromosome X clone PTB-100E10 map... 42 1.4
8emb|AL593853.11| Mouse DNA sequence from clone RP23-199A2 on chr... 42 1.4
9gb|AC087487.14| Homo sapiens chromosome 15, clone RP11-698F12, c... 42 1.4
10gb|AC068867.9| Homo sapiens chromosome 15, clone RP11-702M1, com... 42 1.4
11gb|AC090815.3| Homo sapiens chromosome 15, clone RP11-1078O1, co... 42 1.4
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
13dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
14gb|AC023881.6| Homo sapiens BAC clone RP11-108C2 from 2, complet... 42 1.4
15gb|AC005731.2| Human X BAC RP11-159I8 (Roswell Park Cancer Insti... 42 1.4
16emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chr... 42 1.4
17gb|AC154193.2| Mus musculus BAC clone RP24-398A6 from chromosome... 40 5.4
18gb|AC152821.5| Mus musculus BAC clone RP24-366H21 from chromosom... 40 5.4
19gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
20gb|AC114342.12| Mus musculus chromosome 5, clone RP24-143H14, co... 40 5.4
21gb|AC124212.2| Mus musculus chromosome X clone CT7-532E7 map qA7... 40 5.4
22gb|AC150661.6| Mus musculus BAC clone RP23-6A9 from chromosome 1... 40 5.4
23gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
24gb|AC161537.7| Mus musculus chromosome 15, clone RP23-471J11, co... 40 5.4
25gb|AC118639.12| Mus musculus chromosome 15, clone RP24-112I4, co... 40 5.4
26gb|AC135808.4| Mus musculus BAC clone RP24-316N5 from chromosome... 40 5.4
27gb|AC009135.12| Homo sapiens chromosome 16 clone RP11-509E10, co... 40 5.4
28gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome... 40 5.4
29gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome... 40 5.4
30gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, comp... 40 5.4
31gb|AC073886.4| Homo sapiens BAC clone RP11-101N13 from 7, comple... 40 5.4
32emb|Z93403.1|HS308O1 Human DNA sequence from clone RP1-308O1 on ... 40 5.4
33emb|AL450487.17| Human DNA sequence from clone RP11-314A15 on ch... 40 5.4
34emb|AL139405.11| Human DNA sequence from clone RP11-393E10 on ch... 40 5.4
35emb|AL136124.10| Human DNA sequence from clone RP4-792D7 on chro... 40 5.4
36gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, com... 40 5.4
37emb|X73282.1|CPGPD Claviceps purpurea GPD 1 gene for glyceraldeh... 40 5.4
38emb|AL645599.14| Mouse DNA sequence from clone RP23-285F4 on chr... 40 5.4
39emb|BX530030.12| Zebrafish DNA sequence from clone DKEY-38K9 in ... 40 5.4
40gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.4
41gb|AC023716.4| Drosophila melanogaster X BAC RP98-45E21 (Roswell... 40 5.4
42gb|AC024678.10| Homo sapiens chromosome 8, clone RP11-564K10, co... 40 5.4
43gb|AC183287.1| Pan troglodytes chromosome X clone CH251-59K17 ma... 40 5.4
44gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, comp... 40 5.4
45gb|AC026795.6| Homo sapiens chromosome 5 clone CTD-2287L22, comp... 40 5.4
46dbj|AB168181.1| Macaca fascicularis testis cDNA clone: QtsA-1035... 40 5.4
47gb|AC027338.5| Homo sapiens chromosome 5 clone CTD-2227C6, compl... 40 5.4
48gb|AC008597.8| Homo sapiens chromosome 5 clone CTB-102L23, compl... 40 5.4
49gb|AC148664.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.4
50gb|AC156616.5| Mus musculus chromosome 3, clone RP24-158L2, comp... 40 5.4
51gb|AC024564.4|AC024564 Homo sapiens chromosome 5 clone CTC-532M5... 40 5.4
52dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
53dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
54dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
55gb|AC023829.6| Homo sapiens chromosome 16 clone RP11-578P21, com... 40 5.4
56gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome... 40 5.4
57gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromos... 40 5.4
58gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosom... 40 5.4
59gb|AC159235.2| Mus musculus BAC clone RP24-432L4 from chromosome... 40 5.4
60gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, co... 40 5.4
61gb|AC006508.2|AC006508 Mus musculus Yp BAC GSMB-187H15 (Genome S... 40 5.4
62gb|AC102178.21| Mus musculus chromosome 7, clone RP24-70C24, com... 40 5.4
63gb|AC138612.1| Homo sapiens BAC clone CTD-2293E22 from 2, comple... 40 5.4
64dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
65dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
66dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
67emb|BX571879.8| Zebrafish DNA sequence from clone DKEY-238C7 in ... 40 5.4
68emb|AL928668.7| Zebrafish DNA sequence from clone CH211-208M1, c... 40 5.4
69dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
70gb|AC147616.3| Mus musculus BAC clone RP23-433L22 from 8, comple... 40 5.4
71gb|AC145393.4| Mus musculus BAC clone RP24-208N6 from Y, complet... 40 5.4
72emb|CT573208.8| Zebrafish DNA sequence from clone CH73-52H17 in ... 40 5.4
73gb|AE003450.4| Drosophila melanogaster chromosome X, section 34 ... 40 5.4
74gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosom... 40 5.4
75emb|AL935060.17| Mouse DNA sequence from clone RP24-151H6 on chr... 40 5.4
76gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
77gb|AC164120.2| Mus musculus BAC clone RP24-289J17 from chromosom... 40 5.4
78gb|AC149052.3| Mus musculus BAC clone RP24-548O1 from 7, complet... 40 5.4
79gb|AC149282.2| Mus musculus BAC clone RP23-236D19 from 7, comple... 40 5.4
80emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on ch... 40 5.4
81emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on ch... 40 5.4
82emb|AL805921.7| Mouse DNA sequence from clone RP23-293N9 on chro... 40 5.4
83gb|AC166358.5| Mus musculus BAC clone RP23-338N2 from chromosome... 40 5.4
84emb|AL365334.13| Mouse DNA sequence from clone RP23-392F1 on chr... 40 5.4 
>emb|AL670231.7| Mouse DNA sequence from clone RP23-329G7 on chromosome 4, complete
              sequence
          Length = 229957

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 52     gaaaaggaaaggaaaagatagag 74
              |||||||||||||||||||||||
Sbjct: 175360 gaaaaggaaaggaaaagatagag 175338
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>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence
          Length = 249008

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 52     gaaaaggaaaggaaaagataga 73
              ||||||||||||||||||||||
Sbjct: 192448 gaaaaggaaaggaaaagataga 192469
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>gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosome 7, complete sequence
          Length = 190325

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 47     gaggagaaaaggaaaggaaaag 68
              ||||||||||||||||||||||
Sbjct: 138875 gaggagaaaaggaaaggaaaag 138896
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>gb|AC072023.9| Homo sapiens 3 BAC RP11-3J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 112405

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 48    aggagaaaaggaaaggaaaagataga 73
             ||||||||| ||||||||||||||||
Sbjct: 62666 aggagaaaaagaaaggaaaagataga 62691
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>gb|AC122747.11| Mus musculus chromosome 9, clone RP23-217J11, complete sequence
          Length = 195755

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 51     agaaaaggaaaggaaaagatag 72
              ||||||||||||||||||||||
Sbjct: 153612 agaaaaggaaaggaaaagatag 153633
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>gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 map human ortholog q28,
              complete sequence
          Length = 168371

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 53     aaaaggaaaggaaaagatagagagg 77
              ||||||||||||||||| |||||||
Sbjct: 125414 aaaaggaaaggaaaagaaagagagg 125390
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>gb|AC149235.1| Pan troglodytes chromosome X clone PTB-100E10 map human ortholog q28,
             complete sequence
          Length = 183411

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 53    aaaaggaaaggaaaagatagagagg 77
             ||||||||||||||||| |||||||
Sbjct: 34524 aaaaggaaaggaaaagaaagagagg 34500
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>emb|AL593853.11| Mouse DNA sequence from clone RP23-199A2 on chromosome 11 Contains the
             5' end of a novel gene, the Sfrs1 gene for
             arginine/serine-rich splicing factor 1 (ASF/SF2), the
             Vezf1 gene for vascular endothelial zinc finger 1, a novel
             gene (2210416O15Rik), the gene for the likely ortholog of
             H. sapiens CUE domain containing 1 CUEDC1 (C330016O16Rik),
             the Mrps23 gene for mitochondrial ribosomal protein S23
             and two CpG islands, complete sequence
          Length = 223276

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 51    agaaaaggaaaggaaaagatagaga 75
             ||||||||||||||||||| |||||
Sbjct: 25201 agaaaaggaaaggaaaagaaagaga 25177
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>gb|AC087487.14| Homo sapiens chromosome 15, clone RP11-698F12, complete sequence
          Length = 180232

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 49   ggagaaaaggaaaggaaaaga 69
            |||||||||||||||||||||
Sbjct: 7982 ggagaaaaggaaaggaaaaga 8002
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>gb|AC068867.9| Homo sapiens chromosome 15, clone RP11-702M1, complete sequence
          Length = 179455

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    ggagaaaaggaaaggaaaaga 69
             |||||||||||||||||||||
Sbjct: 44795 ggagaaaaggaaaggaaaaga 44775
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>gb|AC090815.3| Homo sapiens chromosome 15, clone RP11-1078O1, complete sequence
          Length = 180352

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 49     ggagaaaaggaaaggaaaaga 69
              |||||||||||||||||||||
Sbjct: 120805 ggagaaaaggaaaggaaaaga 120825
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 49       ggagaaaaggaaaggaaaaga 69
                |||||||||||||||||||||
Sbjct: 24586584 ggagaaaaggaaaggaaaaga 24586604
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>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1040D09
          Length = 148102

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 49    ggagaaaaggaaaggaaaaga 69
             |||||||||||||||||||||
Sbjct: 12547 ggagaaaaggaaaggaaaaga 12567
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>gb|AC023881.6| Homo sapiens BAC clone RP11-108C2 from 2, complete sequence
          Length = 185802

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 51     agaaaaggaaaggaaaagata 71
              |||||||||||||||||||||
Sbjct: 177051 agaaaaggaaaggaaaagata 177071
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>gb|AC005731.2| Human X BAC RP11-159I8 (Roswell Park Cancer Institute Human BAC
             Library), Cosmid LL0XNC01-3C3 (LLNL X Chromosome Library),
             and BAC GS1-92B2 (Genome Systems Human BAC Library)
             complete sequence
          Length = 143944

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 53    aaaaggaaaggaaaagatagagagg 77
             ||||||||||||||||| |||||||
Sbjct: 66260 aaaaggaaaggaaaagaaagagagg 66236
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>emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chromosome 2, complete
              sequence
          Length = 183985

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 49     ggagaaaaggaaaggaaaaga 69
              |||||||||||||||||||||
Sbjct: 101304 ggagaaaaggaaaggaaaaga 101284
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>gb|AC154193.2| Mus musculus BAC clone RP24-398A6 from chromosome 14, complete sequence
          Length = 161686

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    aggagaaaaggaaaggaaaagata 71
             |||||||||||||| |||||||||
Sbjct: 11201 aggagaaaaggaaaagaaaagata 11224
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>gb|AC152821.5| Mus musculus BAC clone RP24-366H21 from chromosome y, complete sequence
          Length = 179613

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 51     agaaaaggaaaggaaaagatagag 74
              ||||||||||||||| ||||||||
Sbjct: 114601 agaaaaggaaaggaagagatagag 114578
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>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08,
              complete sequence
          Length = 197156

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 377    tacgtggagatcaccctggacgtg 400
              ||||||||||||||||| ||||||
Sbjct: 194766 tacgtggagatcaccctcgacgtg 194743
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>gb|AC114342.12| Mus musculus chromosome 5, clone RP24-143H14, complete sequence
          Length = 171509

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gagaaaaggaaaggaaaaga 69
             ||||||||||||||||||||
Sbjct: 38386 gagaaaaggaaaggaaaaga 38405
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>gb|AC124212.2| Mus musculus chromosome X clone CT7-532E7 map qA7.1, complete
            sequence
          Length = 109783

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 54   aaaggaaaggaaaagataga 73
            ||||||||||||||||||||
Sbjct: 9979 aaaggaaaggaaaagataga 9960
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>gb|AC150661.6| Mus musculus BAC clone RP23-6A9 from chromosome 12, complete sequence
          Length = 234903

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    gaaaaggaaaggaaaagatagaga 75
             |||||||||||||||| |||||||
Sbjct: 28643 gaaaaggaaaggaaaaaatagaga 28666
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 377   tacgtggagatcaccctggacgtg 400
             ||||||||||||||||| ||||||
Sbjct: 34121 tacgtggagatcaccctcgacgtg 34098
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>gb|AC161537.7| Mus musculus chromosome 15, clone RP23-471J11, complete sequence
          Length = 188471

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    cctctcctcctatcctgcta 146
              ||||||||||||||||||||
Sbjct: 168137 cctctcctcctatcctgcta 168118
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>gb|AC118639.12| Mus musculus chromosome 15, clone RP24-112I4, complete sequence
          Length = 166053

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    cctctcctcctatcctgcta 146
              ||||||||||||||||||||
Sbjct: 134021 cctctcctcctatcctgcta 134040
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>gb|AC135808.4| Mus musculus BAC clone RP24-316N5 from chromosome Y, complete
            sequence
          Length = 149744

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 51   agaaaaggaaaggaaaagatagag 74
            ||||||||||||||| ||||||||
Sbjct: 2787 agaaaaggaaaggaagagatagag 2810
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>gb|AC009135.12| Homo sapiens chromosome 16 clone RP11-509E10, complete sequence
          Length = 221640

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    gaggagaaaaggaaaggaaa 66
             ||||||||||||||||||||
Sbjct: 18538 gaggagaaaaggaaaggaaa 18519
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>gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome 12, complete sequence
          Length = 184081

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 52     gaaaaggaaaggaaaagatagaga 75
              |||||||||||||||| |||||||
Sbjct: 118697 gaaaaggaaaggaaaaaatagaga 118720
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>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence
          Length = 186848

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    aaaaggaaaggaaaagatagagag 76
             ||||||||||||||||| ||||||
Sbjct: 71425 aaaaggaaaggaaaagaaagagag 71402
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>gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, complete sequence
          Length = 197121

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     gaaaaggaaaggaaaagatagaga 75
              |||||||||||||||||| |||||
Sbjct: 127635 gaaaaggaaaggaaaagaaagaga 127612
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>gb|AC073886.4| Homo sapiens BAC clone RP11-101N13 from 7, complete sequence
          Length = 112568

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    aaaggaaaggaaaagataga 73
             ||||||||||||||||||||
Sbjct: 33590 aaaggaaaggaaaagataga 33571
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>emb|Z93403.1|HS308O1 Human DNA sequence from clone RP1-308O1 on chromosome Xp11.3-11.4
              Contains part of a novel gene, complete sequence
          Length = 166715

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aggaaaggaaaagatagaga 75
              ||||||||||||||||||||
Sbjct: 148469 aggaaaggaaaagatagaga 148450
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>emb|AL450487.17| Human DNA sequence from clone RP11-314A15 on chromosome Xq12-13.3
              Contains a eukaryotic translation termination factor 1
              (ETF1) pseudogene, a cyclin fold protein 1 (CFP1)
              pseudogene and a CpG island, complete sequence
          Length = 159093

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aaaggaaaggaaaagataga 73
              ||||||||||||||||||||
Sbjct: 147431 aaaggaaaggaaaagataga 147450
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>emb|AL139405.11| Human DNA sequence from clone RP11-393E10 on chromosome 10 Contains the
             5' end of a variant of the gene for a novel protein
             (FLJ10210) and the 3' end of the gene for a novel protein
             (MGC11034), complete sequence
          Length = 179829

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 54    aaaggaaaggaaaagatagagagg 77
             |||||||||||||||| |||||||
Sbjct: 70761 aaaggaaaggaaaagaaagagagg 70784
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>emb|AL136124.10| Human DNA sequence from clone RP4-792D7 on chromosome 1q42.2-43
             Contains the 5' end of the TARBP1 gene for TAR (HIV) RNA
             binding protein 1 and a CpG island, complete sequence
          Length = 104632

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gagaaaaggaaaggaaaaga 69
             ||||||||||||||||||||
Sbjct: 77563 gagaaaaggaaaggaaaaga 77544
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>gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, complete sequence
          Length = 197826

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     gagaaaaggaaaggaaaaga 69
              ||||||||||||||||||||
Sbjct: 120021 gagaaaaggaaaggaaaaga 120040
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>emb|X73282.1|CPGPD Claviceps purpurea GPD 1 gene for glyceraldehyde-3-phosphate
            dehydrogenase
          Length = 3495

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 47   gaggagaaaaggaaaggaaaagat 70
            ||||||||||||||||| ||||||
Sbjct: 1563 gaggagaaaaggaaagggaaagat 1540
to top
>emb|AL645599.14| Mouse DNA sequence from clone RP23-285F4 on chromosome 11 Contains the 5'
              end of a novel gene, a ribosomal protein L7A (Rpl7a)
              pseudogene and a CpG island, complete sequence
          Length = 127405

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     gaggagaaaaggaaaggaaa 66
              ||||||||||||||||||||
Sbjct: 105107 gaggagaaaaggaaaggaaa 105088
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>emb|BX530030.12| Zebrafish DNA sequence from clone DKEY-38K9 in linkage group 21,
             complete sequence
          Length = 180154

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ggagaaaaggaaaggaaaag 68
             ||||||||||||||||||||
Sbjct: 71574 ggagaaaaggaaaggaaaag 71593
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 159     gaccggctgccggcgcggccatgc 182
               ||||||| ||||||||||||||||
Sbjct: 2052040 gaccggcagccggcgcggccatgc 2052017
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>gb|AC023716.4| Drosophila melanogaster X BAC RP98-45E21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 169124

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     aaaaggaaaggaaaagatagagag 76
              ||||||||||||||||| ||||||
Sbjct: 137996 aaaaggaaaggaaaagaaagagag 137973
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>gb|AC024678.10| Homo sapiens chromosome 8, clone RP11-564K10, complete sequence
          Length = 170788

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     gagaaaaggaaaggaaaaga 69
              ||||||||||||||||||||
Sbjct: 108793 gagaaaaggaaaggaaaaga 108774
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>gb|AC183287.1| Pan troglodytes chromosome X clone CH251-59K17 map human ortholog p11.4,
              complete sequence
          Length = 225601

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aggaaaggaaaagatagaga 75
              ||||||||||||||||||||
Sbjct: 122644 aggaaaggaaaagatagaga 122663
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>gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, complete sequence
          Length = 228156

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     aaaggaaaggaaaagataga 73
              ||||||||||||||||||||
Sbjct: 177965 aaaggaaaggaaaagataga 177946
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>gb|AC026795.6| Homo sapiens chromosome 5 clone CTD-2287L22, complete sequence
          Length = 156277

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aaaggaaaggaaaagataga 73
             ||||||||||||||||||||
Sbjct: 73786 aaaggaaaggaaaagataga 73805
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>dbj|AB168181.1| Macaca fascicularis testis cDNA clone: QtsA-10359, similar to human
            EH-domain containing 2 (EHD2), mRNA, RefSeq: NM_014601.2
          Length = 3560

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 54   aaaggaaaggaaaagatagagagg 77
            |||||||||||||||| |||||||
Sbjct: 2680 aaaggaaaggaaaagagagagagg 2657
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>gb|AC027338.5| Homo sapiens chromosome 5 clone CTD-2227C6, complete sequence
          Length = 117813

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aaaggaaaggaaaagataga 73
             ||||||||||||||||||||
Sbjct: 62424 aaaggaaaggaaaagataga 62443
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>gb|AC008597.8| Homo sapiens chromosome 5 clone CTB-102L23, complete sequence
          Length = 69479

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aaaggaaaggaaaagataga 73
             ||||||||||||||||||||
Sbjct: 55024 aaaggaaaggaaaagataga 55043
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>gb|AC148664.1| Macaca mulatta Major Histocompatibility Complex BAC MMU021E24, complete
              sequence
          Length = 189424

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 50     gagaaaaggaaaggaaaagatagagagg 77
              |||||||||||||| |||||||||||||
Sbjct: 120898 gagaaaaggaaagg-aaagatagagagg 120924
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>gb|AC156616.5| Mus musculus chromosome 3, clone RP24-158L2, complete sequence
          Length = 127112

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    aaaaggaaaggaaaagatag 72
             ||||||||||||||||||||
Sbjct: 89285 aaaaggaaaggaaaagatag 89304
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>gb|AC024564.4|AC024564 Homo sapiens chromosome 5 clone CTC-532M5, complete sequence
          Length = 176621

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    aaaggaaaggaaaagataga 73
             ||||||||||||||||||||
Sbjct: 31401 aaaggaaaggaaaagataga 31382
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 377      tacgtggagatcaccctggacgtg 400
                ||||||||||||||||| ||||||
Sbjct: 18930750 tacgtggagatcaccctcgacgtg 18930727
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 50      gagaaaaggaaaggaaaaga 69
               ||||||||||||||||||||
Sbjct: 1217396 gagaaaaggaaaggaaaaga 1217377
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 54    aaaggaaaggaaaagatagagagg 77
             |||||||||||||||| |||||||
Sbjct: 52619 aaaggaaaggaaaagaaagagagg 52642
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>gb|AC023829.6| Homo sapiens chromosome 16 clone RP11-578P21, complete sequence
          Length = 161477

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    gaggagaaaaggaaaggaaa 66
             ||||||||||||||||||||
Sbjct: 85146 gaggagaaaaggaaaggaaa 85127
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>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete
            sequence
          Length = 202303

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 48   aggagaaaaggaaaggaaaagata 71
            |||||||||||||| |||||||||
Sbjct: 8573 aggagaaaaggaaaagaaaagata 8550
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>gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromosome 7, complete
             sequence
          Length = 188174

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aaaggaaaggaaaagataga 73
             ||||||||||||||||||||
Sbjct: 66113 aaaggaaaggaaaagataga 66132
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>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete sequence
          Length = 227632

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 53     aaaaggaaaggaaaagatagagag 76
              ||||||||||||||||| ||||||
Sbjct: 115425 aaaaggaaaggaaaagaaagagag 115448
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>gb|AC159235.2| Mus musculus BAC clone RP24-432L4 from chromosome ul, complete sequence
          Length = 133340

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    agaaaaggaaaggaaaagatagag 74
             ||||||||||||||| ||||||||
Sbjct: 77785 agaaaaggaaaggaagagatagag 77762
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>gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, complete sequence
          Length = 211987

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    gaaaggaaaagatagagagg 77
             ||||||||||||||||||||
Sbjct: 31519 gaaaggaaaagatagagagg 31500
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>gb|AC006508.2|AC006508 Mus musculus Yp BAC GSMB-187H15 (Genome Systems Mouse BAC Library)
             complete sequence
          Length = 185286

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gagaaaaggaaaggaaaaga 69
             ||||||||||||||||||||
Sbjct: 28388 gagaaaaggaaaggaaaaga 28407
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>gb|AC102178.21| Mus musculus chromosome 7, clone RP24-70C24, complete sequence
          Length = 190370

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gagaaaaggaaaggaaaaga 69
             ||||||||||||||||||||
Sbjct: 94752 gagaaaaggaaaggaaaaga 94733
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>gb|AC138612.1| Homo sapiens BAC clone CTD-2293E22 from 2, complete sequence
          Length = 158057

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aaaggaaaggaaaagataga 73
             ||||||||||||||||||||
Sbjct: 81020 aaaggaaaggaaaagataga 81039
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>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1203H11
          Length = 156561

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     gagaaaaggaaaggaaaaga 69
              ||||||||||||||||||||
Sbjct: 130633 gagaaaaggaaaggaaaaga 130614
to top
>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0073J19
          Length = 165174

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gagaaaaggaaaggaaaaga 69
             ||||||||||||||||||||
Sbjct: 46703 gagaaaaggaaaggaaaaga 46684
to top
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1026C12
          Length = 170240

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 54    aaaggaaaggaaaagatagagagg 77
             |||||||||||||||| |||||||
Sbjct: 51918 aaaggaaaggaaaagaaagagagg 51941
to top
>emb|BX571879.8| Zebrafish DNA sequence from clone DKEY-238C7 in linkage group 18,
              complete sequence
          Length = 252198

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    tctgtctgtccaaccatcct 129
              ||||||||||||||||||||
Sbjct: 106520 tctgtctgtccaaccatcct 106501
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>emb|AL928668.7| Zebrafish DNA sequence from clone CH211-208M1, complete sequence
          Length = 241975

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     ggagaaaaggaaaggaaaag 68
              ||||||||||||||||||||
Sbjct: 138094 ggagaaaaggaaaggaaaag 138075
to top
>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091F23
          Length = 147699

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gagaaaaggaaaggaaaaga 69
             ||||||||||||||||||||
Sbjct: 84475 gagaaaaggaaaggaaaaga 84456
to top
>gb|AC147616.3| Mus musculus BAC clone RP23-433L22 from 8, complete sequence
          Length = 182152

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gagaaaaggaaaggaaaaga 69
             ||||||||||||||||||||
Sbjct: 58783 gagaaaaggaaaggaaaaga 58764
to top
>gb|AC145393.4| Mus musculus BAC clone RP24-208N6 from Y, complete sequence
          Length = 167299

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gagaaaaggaaaggaaaaga 69
             ||||||||||||||||||||
Sbjct: 65800 gagaaaaggaaaggaaaaga 65781
to top
>emb|CT573208.8| Zebrafish DNA sequence from clone CH73-52H17 in linkage group 13,
             complete sequence
          Length = 44002

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aggagaaaaggaaaggaaaa 67
             ||||||||||||||||||||
Sbjct: 43961 aggagaaaaggaaaggaaaa 43980
to top
>gb|AE003450.4| Drosophila melanogaster chromosome X, section 34 of 74 of the complete
             sequence
          Length = 232514

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    aaaaggaaaggaaaagatagagag 76
             ||||||||||||||||| ||||||
Sbjct: 62857 aaaaggaaaggaaaagaaagagag 62834
to top
>gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosome 12, complete
             sequence
          Length = 197870

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    gaaaaggaaaggaaaagatagaga 75
             |||||||||||||||| |||||||
Sbjct: 99777 gaaaaggaaaggaaaaaatagaga 99754
to top
>emb|AL935060.17| Mouse DNA sequence from clone RP24-151H6 on chromosome 2, complete
             sequence
          Length = 212007

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gagaaaaggaaaggaaaaga 69
             ||||||||||||||||||||
Sbjct: 73893 gagaaaaggaaaggaaaaga 73912
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 377      tacgtggagatcaccctggacgtg 400
                ||||||||||||||||| ||||||
Sbjct: 19089572 tacgtggagatcaccctcgacgtg 19089549
to top
>gb|AC164120.2| Mus musculus BAC clone RP24-289J17 from chromosome 14, complete
             sequence
          Length = 147050

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    gaggagaaaaggaaaggaaa 66
             ||||||||||||||||||||
Sbjct: 32345 gaggagaaaaggaaaggaaa 32326
to top
>gb|AC149052.3| Mus musculus BAC clone RP24-548O1 from 7, complete sequence
          Length = 209182

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    aggagaaaaggaaaggaaaagata 71
             |||||||||| |||||||||||||
Sbjct: 43611 aggagaaaagcaaaggaaaagata 43634
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>gb|AC149282.2| Mus musculus BAC clone RP23-236D19 from 7, complete sequence
          Length = 221553

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 48   aggagaaaaggaaaggaaaagata 71
            |||||||||| |||||||||||||
Sbjct: 7906 aggagaaaagcaaaggaaaagata 7883
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>emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on chromosome 2, complete
              sequence
          Length = 190466

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     gaggagaaaaggaaaggaaa 66
              ||||||||||||||||||||
Sbjct: 116841 gaggagaaaaggaaaggaaa 116860
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>emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on chromosome X, complete
              sequence
          Length = 187669

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     aaaggaaaggaaaagataga 73
              ||||||||||||||||||||
Sbjct: 128461 aaaggaaaggaaaagataga 128442
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>emb|AL805921.7| Mouse DNA sequence from clone RP23-293N9 on chromosome 4, complete
              sequence
          Length = 162090

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     gaggagaaaaggaaaggaaa 66
              ||||||||||||||||||||
Sbjct: 113874 gaggagaaaaggaaaggaaa 113855
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>gb|AC166358.5| Mus musculus BAC clone RP23-338N2 from chromosome 12, complete sequence
          Length = 226310

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     gaaaaggaaaggaaaagatagaga 75
              |||||||||||||||| |||||||
Sbjct: 198181 gaaaaggaaaggaaaaaatagaga 198158
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>emb|AL365334.13| Mouse DNA sequence from clone RP23-392F1 on chromosome 1, complete
              sequence
          Length = 173053

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     ggagaaaaggaaaggaaaag 68
              ||||||||||||||||||||
Sbjct: 124501 ggagaaaaggaaaggaaaag 124520


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,507,821
Number of Sequences: 3902068
Number of extensions: 2507821
Number of successful extensions: 74732
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 74386
Number of HSP's gapped (non-prelim): 347
length of query: 401
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 379
effective length of database: 17,147,199,772
effective search space: 6498788713588
effective search space used: 6498788713588
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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