ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl06b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464252.1| Oryza sativa (japonica cultivar-group), mRNA 103 5e-19
2dbj|AK069128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
3dbj|AK065409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
5dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
6dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
7dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
8ref|NM_001035877.1| Arabidopsis thaliana CAND1 AT2G02560 (CAND1)... 50 0.006
9ref|NM_126312.2| Arabidopsis thaliana CAND1 AT2G02560 (CAND1) tr... 48 0.024
10gb|BT010134.1| Arabidopsis thaliana At2g02560 gene, complete cds 48 0.024
11gb|AY099857.1| Arabidopsis thaliana unknown protein (At2g02560) ... 48 0.024
12gb|AC004136.3| Arabidopsis thaliana chromosome 2 BAC T8K22 genom... 48 0.024
13emb|AL663001.3|OSJN00197 Oryza sativa genomic DNA, chromosome 4,... 44 0.38
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
16gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa004... 44 0.38
17dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
18dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
19emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4,... 44 0.38
20gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.5
21ref|XM_991177.1| PREDICTED: Mus musculus hypothetical protein LO... 42 1.5
22gb|AC122423.2| Mus musculus BAC clone RP24-171N18 from 7, comple... 42 1.5
23gb|AC164158.3| Mus musculus BAC clone RP24-263G24 from chromosom... 42 1.5
24gb|AC104799.4| Homo sapiens BAC clone RP11-345F13 from 2, comple... 42 1.5
25dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.5
26emb|AJ428456.1|TSO428456 Taenia solium spliced leader sequence a... 42 1.5
27gb|AY693425.1| Drosophila pseudoobscura isolate BP_159_160_C dis... 40 5.9
28gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosom... 40 5.9
29gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, c... 40 5.9
30gb|AC091806.4| Homo sapiens chromosome X clone RP11-320G24 map p... 40 5.9
31gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p... 40 5.9
32ref|NM_022087.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine... 40 5.9
33gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, co... 40 5.9
34gb|AC131064.5| Homo sapiens chromosome 11, clone RP5-950E7, comp... 40 5.9
35gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, comp... 40 5.9
36gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell ... 40 5.9
37gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.9
38gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswel... 40 5.9
39dbj|AK124934.1| Homo sapiens cDNA FLJ42944 fis, clone BRSTN20048... 40 5.9
40gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.9
41emb|BX935200.2| Gallus gallus finished cDNA, clone ChEST863e24 40 5.9
42dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
43dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.9
44dbj|AK026056.1| Homo sapiens cDNA: FLJ22403 fis, clone HRC08167 40 5.9
45dbj|AK025287.1| Homo sapiens cDNA: FLJ21634 fis, clone COL08230 40 5.9
46gb|AC006017.2|AC006017 Homo sapiens PAC clone RP5-981O7 from 7q3... 40 5.9
47emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 5.9
48gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53... 40 5.9
49gb|AC005320.1|AC005320 Human Chromosome 11p14.3 PAC clone pDJ950... 40 5.9
50gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 5.9
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
52emb|AL845460.9| Mouse DNA sequence from clone RP23-453H2 on chro... 40 5.9 
>ref|XM_464252.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4275

 Score =  103 bits (52), Expect = 5e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                       
Query: 356 acataaccggcatcttggagaagatgacagggaaagataaagactacagatatatggcta 415
           ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 364 acataaccaccatcttggagaagatgacagggaaagataaggactacagatatatggcaa 423

                           
Query: 416 catcagatctgcttag 431
           | |||||| |||||||
Sbjct: 424 cttcagatttgcttag 439
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>dbj|AK069128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N20, full
           insert sequence
          Length = 4275

 Score =  103 bits (52), Expect = 5e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                       
Query: 356 acataaccggcatcttggagaagatgacagggaaagataaagactacagatatatggcta 415
           ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 364 acataaccaccatcttggagaagatgacagggaaagataaggactacagatatatggcaa 423

                           
Query: 416 catcagatctgcttag 431
           | |||||| |||||||
Sbjct: 424 cttcagatttgcttag 439
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>dbj|AK065409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013011H16, full
           insert sequence
          Length = 3655

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                       
Query: 356 acataaccggcatcttggagaagatgacagggaaagataaagactacagatatatggcta 415
           ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 322 acataaccaccatcttggagaagatgacagggaaagataaggactacagatatatggcaa 381

                           
Query: 416 catcagatctgcttag 431
           | ||| || |||||||
Sbjct: 382 cttcaaatttgcttag 397
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                      
Query: 377     agatgacagggaaagataaagactacagatatatggctacatcagatctgcttag 431
               ||||||||||||||||||| ||||||||||||||||| || |||||| |||||||
Sbjct: 3668441 agatgacagggaaagataaggactacagatatatggcaacttcagatttgcttag 3668387



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                      
Query: 377     agatgacagggaaagataaagactacagatatatggctacatcagatctgcttag 431
               ||||||||||||||||||| ||||||||||||||||| || ||| || |||||||
Sbjct: 3779539 agatgacagggaaagataaggactacagatatatggcaacttcaaatttgcttag 3779593
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>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0669G09
          Length = 140067

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                   
Query: 377  agatgacagggaaagataaagactacagatatatggctacatcagatctgcttag 431
            ||||||||||||||||||| ||||||||||||||||| || |||||| |||||||
Sbjct: 8758 agatgacagggaaagataaggactacagatatatggcaacttcagatttgcttag 8704



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                     
Query: 377    agatgacagggaaagataaagactacagatatatggctacatcagatctgcttag 431
              ||||||||||||||||||| ||||||||||||||||| || ||| || |||||||
Sbjct: 119856 agatgacagggaaagataaggactacagatatatggcaacttcaaatttgcttag 119910
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0085K21
          Length = 180714

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                     
Query: 377    agatgacagggaaagataaagactacagatatatggctacatcagatctgcttag 431
              ||||||||||||||||||| ||||||||||||||||| || |||||| |||||||
Sbjct: 149731 agatgacagggaaagataaggactacagatatatggcaacttcagatttgcttag 149677
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>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1116_A06
          Length = 176062

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                    
Query: 377   agatgacagggaaagataaagactacagatatatggctacatcagatctgcttag 431
             ||||||||||||||||||| ||||||||||||||||| || ||| || |||||||
Sbjct: 35871 agatgacagggaaagataaggactacagatatatggcaacttcaaatttgcttag 35925
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>ref|NM_001035877.1| Arabidopsis thaliana CAND1 AT2G02560 (CAND1) transcript variant
           AT2G02560.2 mRNA, complete cds
          Length = 4089

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 376 aagatgacagggaaagataaagactacagatatatggctacatcagatctgcttagtgag 435
           |||||||| || ||||||||||| |||||||| ||||| || || ||| |||||| ||||
Sbjct: 215 aagatgacgggtaaagataaagattacagatacatggcaacctctgatttgcttaatgag 274

            
Query: 436 t 436
           |
Sbjct: 275 t 275
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>ref|NM_126312.2| Arabidopsis thaliana CAND1 AT2G02560 (CAND1) transcript variant
           AT2G02560.1 mRNA, complete cds
          Length = 4095

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 377 agatgacagggaaagataaagactacagatatatggctacatcagatctgcttagtgagt 436
           ||||||| || ||||||||||| |||||||| ||||| || || ||| |||||| |||||
Sbjct: 222 agatgacgggtaaagataaagattacagatacatggcaacctctgatttgcttaatgagt 281
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>gb|BT010134.1| Arabidopsis thaliana At2g02560 gene, complete cds
          Length = 3660

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 377 agatgacagggaaagataaagactacagatatatggctacatcagatctgcttagtgagt 436
           ||||||| || ||||||||||| |||||||| ||||| || || ||| |||||| |||||
Sbjct: 41  agatgacgggtaaagataaagattacagatacatggcaacctctgatttgcttaatgagt 100
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>gb|AY099857.1| Arabidopsis thaliana unknown protein (At2g02560) mRNA, complete cds
          Length = 4095

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 377 agatgacagggaaagataaagactacagatatatggctacatcagatctgcttagtgagt 436
           ||||||| || ||||||||||| |||||||| ||||| || || ||| |||||| |||||
Sbjct: 222 agatgacgggtaaagataaagattacagatacatggcaacctctgatttgcttaatgagt 281
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>gb|AC004136.3| Arabidopsis thaliana chromosome 2 BAC T8K22 genomic sequence, complete
             sequence
          Length = 98957

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 377   agatgacagggaaagataaagactacagatatatggctacatcagatctgcttagtgagt 436
             ||||||| || ||||||||||| |||||||| ||||| || || ||| |||||| |||||
Sbjct: 62502 agatgacgggtaaagataaagattacagatacatggcaacctctgatttgcttaatgagt 62443
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>emb|AL663001.3|OSJN00197 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022P19,
            complete sequence
          Length = 135836

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 17   tgctctgctccgctccgctccc 38
            ||||||||||||||||||||||
Sbjct: 2518 tgctctgctccgctccgctccc 2497
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 17      tgctctgctccgctccgctccc 38
               ||||||||||||||||||||||
Sbjct: 7275148 tgctctgctccgctccgctccc 7275127
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 17       tgctctgctccgctccgctccc 38
                ||||||||||||||||||||||
Sbjct: 38567182 tgctctgctccgctccgctccc 38567203
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>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
          Length = 193444

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 17     tgctctgctccgctccgctccc 38
              ||||||||||||||||||||||
Sbjct: 160263 tgctctgctccgctccgctccc 160284
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>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434C04
          Length = 150064

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 17    tgctctgctccgctccgctccc 38
             ||||||||||||||||||||||
Sbjct: 87863 tgctctgctccgctccgctccc 87884
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>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1099D03
          Length = 191022

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 17    tgctctgctccgctccgctccc 38
             ||||||||||||||||||||||
Sbjct: 25155 tgctctgctccgctccgctccc 25176
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>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13,
              complete sequence
          Length = 143298

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 17     tgctctgctccgctccgctccc 38
              ||||||||||||||||||||||
Sbjct: 138885 tgctctgctccgctccgctccc 138864
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 45      cggcatcggcgatcggcaggc 65
               |||||||||||||||||||||
Sbjct: 1011307 cggcatcggcgatcggcaggc 1011327
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>ref|XM_991177.1| PREDICTED: Mus musculus hypothetical protein LOC676570 (LOC676570),
           mRNA
          Length = 306

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 17  tgctctgctccgctccgctcc 37
           |||||||||||||||||||||
Sbjct: 236 tgctctgctccgctccgctcc 216



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 17  tgctctgctccgctccgctcc 37
           |||||||||||||||||||||
Sbjct: 184 tgctctgctccgctccgctcc 164



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 17 tgctctgctccgctccgctc 36
          ||||||||||||||||||||
Sbjct: 25 tgctctgctccgctccgctc 6
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>gb|AC122423.2| Mus musculus BAC clone RP24-171N18 from 7, complete sequence
          Length = 141166

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     tgctctgctccgctccgctcc 37
              |||||||||||||||||||||
Sbjct: 103510 tgctctgctccgctccgctcc 103530



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     tgctctgctccgctccgctcc 37
              |||||||||||||||||||||
Sbjct: 103230 tgctctgctccgctccgctcc 103250



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     tgctctgctccgctccgctcc 37
              |||||||||||||||||||||
Sbjct: 103170 tgctctgctccgctccgctcc 103190



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     tgctctgctccgctccgctcc 37
              |||||||||||||||||||||
Sbjct: 103115 tgctctgctccgctccgctcc 103135



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tgctctgctccgctccgctc 36
              ||||||||||||||||||||
Sbjct: 103410 tgctctgctccgctccgctc 103429



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tgctctgctccgctccgctc 36
              ||||||||||||||||||||
Sbjct: 103340 tgctctgctccgctccgctc 103359
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>gb|AC164158.3| Mus musculus BAC clone RP24-263G24 from chromosome 7, complete sequence
          Length = 200983

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    tgctctgctccgctccgctcc 37
             |||||||||||||||||||||
Sbjct: 87545 tgctctgctccgctccgctcc 87565



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    tgctctgctccgctccgctcc 37
             |||||||||||||||||||||
Sbjct: 87265 tgctctgctccgctccgctcc 87285



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    tgctctgctccgctccgctcc 37
             |||||||||||||||||||||
Sbjct: 87205 tgctctgctccgctccgctcc 87225



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    tgctctgctccgctccgctcc 37
             |||||||||||||||||||||
Sbjct: 87150 tgctctgctccgctccgctcc 87170



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tgctctgctccgctccgctc 36
             ||||||||||||||||||||
Sbjct: 87445 tgctctgctccgctccgctc 87464



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tgctctgctccgctccgctc 36
             ||||||||||||||||||||
Sbjct: 87375 tgctctgctccgctccgctc 87394
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>gb|AC104799.4| Homo sapiens BAC clone RP11-345F13 from 2, complete sequence
          Length = 159933

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 310   ttgtgaagaggacttgaacac 330
             |||||||||||||||||||||
Sbjct: 84221 ttgtgaagaggacttgaacac 84241
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 361     accggcatcttggagaagatg 381
               |||||||||||||||||||||
Sbjct: 3029239 accggcatcttggagaagatg 3029259
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>emb|AJ428456.1|TSO428456 Taenia solium spliced leader sequence and spliced leader mini-exon
          Length = 2040

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 17  tgctctgctccgctccgctcc 37
           |||||||||||||||||||||
Sbjct: 428 tgctctgctccgctccgctcc 448
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>gb|AY693425.1| Drosophila pseudoobscura isolate BP_159_160_C distal Arrowhead
            inversion breakpoint region
          Length = 20941

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   tgctctgctccgctccgctc 36
            ||||||||||||||||||||
Sbjct: 8291 tgctctgctccgctccgctc 8310
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>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0003P07,
              complete sequence
          Length = 175116

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     gcggcgtcgtgcctcgtgcg 106
              ||||||||||||||||||||
Sbjct: 112549 gcggcgtcgtgcctcgtgcg 112530
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>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence
          Length = 182534

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    aggacttgaacacaggtttg 337
              ||||||||||||||||||||
Sbjct: 135771 aggacttgaacacaggtttg 135752
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>gb|AC091806.4| Homo sapiens chromosome X clone RP11-320G24 map p11.4, complete
            sequence
          Length = 182440

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   tgctctgctccgctccgctc 36
            ||||||||||||||||||||
Sbjct: 9916 tgctctgctccgctccgctc 9935
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>gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p11.4, complete
             sequence
          Length = 218733

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tgctctgctccgctccgctc 36
             ||||||||||||||||||||
Sbjct: 78841 tgctctgctccgctccgctc 78860
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>ref|NM_022087.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide
            N-acetylgalactosaminyltransferase 11 (GalNAc-T11)
            (GALNT11), mRNA
          Length = 2591

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  catcttggagaagatgacag 385
            ||||||||||||||||||||
Sbjct: 2005 catcttggagaagatgacag 2024
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>gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, complete sequence
          Length = 192769

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    aggacttgaacacaggtttg 337
              ||||||||||||||||||||
Sbjct: 188311 aggacttgaacacaggtttg 188292
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>gb|AC131064.5| Homo sapiens chromosome 11, clone RP5-950E7, complete sequence
          Length = 106740

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   cagcattgggactccttccc 144
             ||||||||||||||||||||
Sbjct: 47436 cagcattgggactccttccc 47417
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>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence
          Length = 188718

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    aggacttgaacacaggtttg 337
              ||||||||||||||||||||
Sbjct: 112931 aggacttgaacacaggtttg 112912
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>gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 194979

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tgctctgctccgctccgctc 36
              ||||||||||||||||||||
Sbjct: 186872 tgctctgctccgctccgctc 186891
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    gcagccgtcctcgccgacga 167
              ||||||||||||||||||||
Sbjct: 984472 gcagccgtcctcgccgacga 984453
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>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 172540

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    tgctctgctccgctccgctc 36
             ||||||||||||||||||||
Sbjct: 69673 tgctctgctccgctccgctc 69654
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>dbj|AK124934.1| Homo sapiens cDNA FLJ42944 fis, clone BRSTN2004863, weakly  similar
            to Drosophila melanogaster polypeptide
            N-acetylgalactosaminyltransferase mRNA
          Length = 2747

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  catcttggagaagatgacag 385
            ||||||||||||||||||||
Sbjct: 2359 catcttggagaagatgacag 2378
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     gcagccgtcctcgccgacga 167
               ||||||||||||||||||||
Sbjct: 1043302 gcagccgtcctcgccgacga 1043283
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>emb|BX935200.2| Gallus gallus finished cDNA, clone ChEST863e24
          Length = 933

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  gctctgctccgctccgctcc 37
           ||||||||||||||||||||
Sbjct: 871 gctctgctccgctccgctcc 890
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 87      gcggcgtcgtgcctcgtgcg 106
               ||||||||||||||||||||
Sbjct: 6394519 gcggcgtcgtgcctcgtgcg 6394500
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 143     ccaccgcagccgtcctcgcc 162
               ||||||||||||||||||||
Sbjct: 2923616 ccaccgcagccgtcctcgcc 2923635
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>dbj|AK026056.1| Homo sapiens cDNA: FLJ22403 fis, clone HRC08167
          Length = 1649

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  catcttggagaagatgacag 385
            ||||||||||||||||||||
Sbjct: 1244 catcttggagaagatgacag 1263
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>dbj|AK025287.1| Homo sapiens cDNA: FLJ21634 fis, clone COL08230
          Length = 2591

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  catcttggagaagatgacag 385
            ||||||||||||||||||||
Sbjct: 2005 catcttggagaagatgacag 2024
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>gb|AC006017.2|AC006017 Homo sapiens PAC clone RP5-981O7 from 7q34-q36, complete sequence
          Length = 162556

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    catcttggagaagatgacag 385
              ||||||||||||||||||||
Sbjct: 112415 catcttggagaagatgacag 112434
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    cgtgcggcgcagcagggcgt 120
              ||||||||||||||||||||
Sbjct: 841300 cgtgcggcgcagcagggcgt 841319
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>gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53 of 83 of the complete
              sequence
          Length = 295875

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tgctctgctccgctccgctc 36
              ||||||||||||||||||||
Sbjct: 247425 tgctctgctccgctccgctc 247444
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>gb|AC005320.1|AC005320 Human Chromosome 11p14.3 PAC clone pDJ950e7, complete sequence
          Length = 106729

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   cagcattgggactccttccc 144
             ||||||||||||||||||||
Sbjct: 47429 cagcattgggactccttccc 47410
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 103     tgcggcgcagcagggcgtcg 122
               ||||||||||||||||||||
Sbjct: 1683845 tgcggcgcagcagggcgtcg 1683864
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 87      gcggcgtcgtgcctcgtgcg 106
               ||||||||||||||||||||
Sbjct: 6396505 gcggcgtcgtgcctcgtgcg 6396486
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>emb|AL845460.9| Mouse DNA sequence from clone RP23-453H2 on chromosome 2, complete
             sequence
          Length = 172295

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tgctctgctccgctccgctc 36
             ||||||||||||||||||||
Sbjct: 89469 tgctctgctccgctccgctc 89488


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,416,280
Number of Sequences: 3902068
Number of extensions: 3416280
Number of successful extensions: 92623
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91870
Number of HSP's gapped (non-prelim): 753
length of query: 436
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 414
effective length of database: 17,147,199,772
effective search space: 7098940705608
effective search space used: 7098940705608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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