>Y1014_TREPA (O83978) Hypothetical protein TP1014|
          Length = 644

 Score = 32.0 bits (71), Expect(2) = 0.094
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -2

Query: 468 LDESGLHPLQLGSEEQDLAPHLPVQVVLLLEHAAQLGQEGAHG 340
           L E G++ +Q+  +E  L+PH PV+   LL   A+L QE  HG
Sbjct: 410 LSERGVYSVQM-EQEHFLSPHFPVEARSLL---AELAQEAMHG 448



 Score = 21.9 bits (45), Expect(2) = 0.094
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 253 RAQGSEGKLWQV 218
           R QGS G LWQ+
Sbjct: 468 RLQGSRGALWQL 479

>YX0A_CAEEL (Q11116) Hypothetical protein C03B1.10|
          Length = 52

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 136 DGWMDGWVGGCG 101
           DGWMDGW+GG G
Sbjct: 34  DGWMDGWMGGLG 45



 Score = 28.9 bits (63), Expect = 6.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 135 MDGWMDGWEDAGNGNKWR 82
           MDGWMDGW D   G   R
Sbjct: 29  MDGWMDGWMDGWMGGLGR 46

>PITM1_HUMAN (O00562) Membrane-associated phosphatidylinositol transfer protein|
           1 (Phosphatidylinositol transfer protein,
           membrane-associated 1) (Pyk2 N-terminal
           domain-interacting receptor 2) (NIR-2) (Drosophila
           retinal degeneration B homolog)
          Length = 1243

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
 Frame = +2

Query: 251 SEAEQGGAPGEPPAHSPARASNRGWRS*RGP*APSCP----------SWAACSRRSTTCT 400
           SE  +   PG+P   + + ASN G     GP AP  P           W++ S RS+  +
Sbjct: 263 SEGSEAQPPGKPSTEARSAASNTGTPD--GPEAPPGPDASPDASFGKQWSS-SSRSSYSS 319

Query: 401 GR*GARSCSSLPSWR 445
              GA S  SL  WR
Sbjct: 320 QHGGAVSPQSLSEWR 334

>BTBD7_MOUSE (Q8CFE5) BTB/POZ domain-containing protein 7|
          Length = 1130

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +1

Query: 1   TMRSPSAGTARARVSTAACGSTSSGDVAPFIAIPRILPPIHPSIHPGA 144
           TMR P     R RV++     T   D+  F+A    LPP  P  HP A
Sbjct: 726 TMRQPG----RCRVNSTPTAETMFTDLDSFVAFHPPLPPPPPPYHPPA 769

>FLGH_XANOR (Q5GZP1) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 230

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 16  SAGTARARVSTAACGSTSSGDVAPFIAIPRILPPIHPSIHPGA 144
           S+    A  S    G  ++GDV P+ A+  I+P + P++ P A
Sbjct: 8   SSACLAATCSLLLGGCVAAGDVRPYAAMAPIVPVVAPTVQPTA 50

>BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7|
          Length = 1132

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +1

Query: 1   TMRSPSAGTARARVSTAACGSTSSGDVAPFIAIPRILPPIHPSIHPGA 144
           TMR P     R RV++     T   D+  F+A    LPP  P  HP A
Sbjct: 726 TMRQPG----RCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPA 769

>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein|
            kinase with no lysine 1) (Protein kinase,
            lysine-deficient 1)
          Length = 2126

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -2

Query: 345  HGPRHDLHPRLLARAGLCAGGSPGAPP--CSAS 253
            +GP  DL    L+R G    GSP +PP  CS S
Sbjct: 1752 NGPSSDLEAAFLSRGGEDGSGSPHSPPHLCSKS 1784

>CN113_HUMAN (Q9NXV8) Protein C14orf113|
          Length = 159

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = +2

Query: 257 AEQGGAPGEPPAHSPARASNRGWRS*RGP*APSCPSWAACSRRSTTCTGR*GARS-CSSL 433
           AE    P   PA   AR +  G+ +   P  P  PSW  C      C G  G R  C S 
Sbjct: 92  AEAANWPSSSPAK--ARVAWAGFMAILSPGLPLWPSWDRCLAPQPLCCGFTGNRCLCQSA 149

Query: 434 PS-W-RGWR 454
            S W R WR
Sbjct: 150 ESAWCRVWR 158

>NDK_DEIRA (Q9RRJ1) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP|
           kinase) (Nucleoside-2-P kinase)
          Length = 138

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = -3

Query: 239 GGEAVASQAEAATPGKLTGLLAKLSATKPHTAAPXXXXXXXXXXXXXMAINGATSPEEVD 60
           GG  VA   E      + G  A + AT P  AAP                +G+ SPE  +
Sbjct: 67  GGPVVAIALEGENA--IAGWRAMMGATNPANAAPGTIRADFATSTGENVTHGSDSPESAE 124

Query: 59  PQAAV 45
            + A+
Sbjct: 125 RELAL 129

>DCC_MOUSE (P70211) Netrin receptor DCC precursor (Tumor suppressor protein DCC)|
          Length = 1447

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +1

Query: 31   RARVSTAACGSTSSGDVAPFIAIPRILPPIHPSIHPGAAVCGFVADSFASRPVSFP 198
            RA++       +S+  V   I +P +    +P I P +  CG+    F  RPV FP
Sbjct: 1231 RAKLMIPMEAQSSNPAVVSAIPVPTLESAQYPGILP-SPTCGYPHPQFTLRPVPFP 1285

>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)|
          Length = 546

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +2

Query: 257 AEQGGAPGEPPAHSPARASNR-GWRS*RGP*APSCPS---WA 370
           A +  AP  PPA +P  +SN  GW    G  APS P+   WA
Sbjct: 40  ATETSAPAPPPASAPVSSSNNDGW----GEPAPSAPADNGWA 77

>PLIN_MOUSE (Q8CGN5) Perilipin (PERI) (Lipid droplet-associated protein)|
          Length = 517

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +2

Query: 248 SSEAEQGGAPGEP--PAHSPARASNRG-WRS*RGP*APSCP 361
           S+EAE+ G+   P  P  +P     RG  RS RG  APSCP
Sbjct: 425 SAEAERKGSGARPASPESTPRPGQPRGSLRSVRGLSAPSCP 465

>TRPG_CRYNV (P27710) Anthranilate synthase component 2 (EC 4.1.3.27)|
           (Anthranilate synthase component II) [Includes:
           Glutamine amidotransferase; Indole-3-glycerol phosphate
           synthase (EC 4.1.1.48) (IGPS);
           N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3
          Length = 752

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -2

Query: 468 LDESGLHPLQL-GSEEQDLAPHLPVQVVLLLEHAAQLGQEGAHGPRHDLHPRLLARAGLC 292
           +DE GL  +QL G E Q  A  +PV VV +   + +    G    R  L+  +L  AG  
Sbjct: 608 VDEIGLDLVQLHGDEPQAWAKFIPVPVVKVFRVSPEGIVRGGEIRRPGLNQAILLDAGGA 667

Query: 291 AGG 283
           +GG
Sbjct: 668 SGG 670


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,932,509
Number of Sequences: 219361
Number of extensions: 1257522
Number of successful extensions: 4820
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4813
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)