ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl06a06 |
|---|---|
| Clone Library Name | barley_pub |
>VP91_NPVBM (O92446) Capsid-associated protein Vp91 precursor| Length = 839 Score = 31.6 bits (70), Expect = 0.47 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -3 Query: 402 LWFTHAEKDYLIEPKSQASVHGSEPDPQTKPH-PSWRLLDSQPLQIYSTAYIV 247 +W++ + D + P A SEP+P+ +P PS +LD++ L YS Y V Sbjct: 655 VWYSEPDGDEAVAPPPTAPPPPSEPEPEPEPELPSPLILDNKDL-FYSCHYSV 706
>IKAR_ONCMY (O13089) DNA-binding protein Ikaros| Length = 522 Score = 31.6 bits (70), Expect = 0.47 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 2/88 (2%) Frame = -1 Query: 398 GSPMLRKTI*SNPRAKHPSMDQNQIPRQNPIH--HGVSWIASRYKSTLLLI*SSCRSSEK 225 G+ LR I ++P + + + P P HG+S S ++ LLL S SSEK Sbjct: 326 GAESLRPLIQTSPTSSDMGVMGSMYPLHKPPAEGHGLSAKDSAAENLLLLAKSKSASSEK 385 Query: 224 RGRGRTLPGPSLTTKENEQPGRGVDAGG 141 G S T+ N + GV A G Sbjct: 386 DGSPSHSGQDSTDTESNNEEKAGVGASG 413
>YWFA_BACSU (P39637) Hypothetical protein ywfA| Length = 412 Score = 30.8 bits (68), Expect = 0.80 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +3 Query: 15 PLSAGRSAHRLPRAPPGAQIRLGFCT--SFAGGDDRVAGFQNPLATGVDSAAGLFVLLRG 188 P R A ++PR P I + FC F G + + + TG ++AAGLF+++ G Sbjct: 210 PAGTFRDALKVPRVP--VYITITFCNMIGFYGMYSFLGTYLQDVFTGGNTAAGLFIMIYG 267 Query: 189 *G 194 G Sbjct: 268 IG 269
>SH2D3_HUMAN (Q8N5H7) SH2 domain-containing protein 3C (Novel SH2-containing| protein 3) Length = 860 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = -1 Query: 239 RSSEKRGRGRTLPGPSLTTKENEQPGR-GVDAGGEGVLEPGNAVIPAGKTCAK 84 RSS+ T+P PS+ +N Q R +AG + L PG P G AK Sbjct: 69 RSSDMYSHMGTMPRPSIKKAQNSQAARQAQEAGPKPNLVPGGVPDPPGLEAAK 121
>RIHA_SHISS (Q3Z4E1) Pyrimidine-specific ribonucleoside hydrolase rihA (EC| 3.2.-.-) (Cytidine/uridine-specific hydrolase) Length = 311 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +2 Query: 227 FRSSGSSTI*AVE*ICSGWLSKRRHDGWGFVWGSGSDPWTDAWLL 361 FR+ G+ V + +L + + WGFV DP T AWLL Sbjct: 205 FRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLL 249
>RIHA_SHIFL (Q83LY1) Pyrimidine-specific ribonucleoside hydrolase rihA (EC| 3.2.-.-) (Cytidine/uridine-specific hydrolase) Length = 311 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +2 Query: 227 FRSSGSSTI*AVE*ICSGWLSKRRHDGWGFVWGSGSDPWTDAWLL 361 FR+ G+ V + +L + + WGFV DP T AWLL Sbjct: 205 FRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLL 249
>RIHA_ECOLI (P41409) Pyrimidine-specific ribonucleoside hydrolase rihA (EC| 3.2.-.-) (Cytidine/uridine-specific hydrolase) Length = 311 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +2 Query: 227 FRSSGSSTI*AVE*ICSGWLSKRRHDGWGFVWGSGSDPWTDAWLL 361 FR+ G+ V + +L + + WGFV DP T AWLL Sbjct: 205 FRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLL 249
>RIHA_ECOL6 (Q8FJY8) Pyrimidine-specific ribonucleoside hydrolase rihA (EC| 3.2.-.-) (Cytidine/uridine-specific hydrolase) Length = 311 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +2 Query: 227 FRSSGSSTI*AVE*ICSGWLSKRRHDGWGFVWGSGSDPWTDAWLL 361 FR+ G+ V + +L + + WGFV DP T AWLL Sbjct: 205 FRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLL 249
>RIHA_ECO57 (Q8XBL8) Pyrimidine-specific ribonucleoside hydrolase rihA (EC| 3.2.-.-) (Cytidine/uridine-specific hydrolase) Length = 311 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +2 Query: 227 FRSSGSSTI*AVE*ICSGWLSKRRHDGWGFVWGSGSDPWTDAWLL 361 FR+ G+ V + +L + + WGFV DP T AWLL Sbjct: 205 FRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLL 249
>PGKC_CRIFA (P08967) Phosphoglycerate kinase, glycosomal (EC 2.7.2.3)| (Phosphoglycerate kinase C) Length = 455 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 215 GRTLPGPS-LTTKENEQPGRGVDAGGEGVLEPGNAVIPAGKT 93 G++LPG + LT K+ + P AGG+ G A +PA T Sbjct: 404 GKSLPGVTVLTNKDAKAPAAAAAAGGDCPCGSGCAAVPAAAT 445
>FUCO_DROME (Q9VTJ4) Putative alpha-L-fucosidase precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase) Length = 494 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = -3 Query: 357 SQASVHGSEPDPQTKPHPSWRLLDSQPL-QIYSTAYI 250 S A V P P+T+ P+W LD +PL Q Y A + Sbjct: 19 SAAEVDAQVPGPRTRYQPNWASLDQRPLPQWYDDAKV 55
>CJ047_HUMAN (Q86WR7) Protein C10orf47| Length = 435 Score = 29.3 bits (64), Expect = 2.3 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 13/81 (16%) Frame = -1 Query: 236 SSEKRGRGRTLPGPSLTTKENEQPGR------GVDAGGEGVLEPGNAVIPAGKT-CAKP* 78 S E+ RGR LPGP+ + + Q R G + E + ++ PAGK+ C +P Sbjct: 312 SPERVARGRGLPGPAESLRAGGQAPRGPALANGFPSAHEALKSAPSSFAPAGKSLCFRPG 371 Query: 77 TNLGAWRR------PRKAMGA 33 L + R PR+ GA Sbjct: 372 PALPSTRARQSFPGPRQPNGA 392
>CIMA_METTH (O26819) (R)-citramalate synthase (EC 2.3.3.-)| Length = 496 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 215 GRTLPGPSLTTKENEQPGRGVDAGGEGVLEPGNAVIPAGK 96 G PG SLT +E + +DA G ++E G+A+ G+ Sbjct: 13 GEQTPGVSLTPEEKLRIALKIDALGADIIEAGSAITSEGE 52
>SYD_MOOTA (Q2RHW1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 600 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -3 Query: 378 DYLIEPKSQASVHGSEPDPQTKP-HPSWRLLDSQPLQIYSTAY 253 +Y E K +VH P T P W LLDS PL++ + AY Sbjct: 444 EYSAEEKRYVAVH----HPFTMPMEEDWPLLDSDPLRVRALAY 482
>RCEM_RHORU (P10718) Reaction center protein M chain (Photosynthetic reaction| center M subunit) Length = 305 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +3 Query: 12 NPLSAGRSAHRLPRAPPGAQIRLGFCTSFAGGDDRVAGF 128 +P+ GR L PP A+ LGF GG ++AGF Sbjct: 80 SPMEFGRQFFWLGLEPPAAEYGLGFAPLAEGGWWQIAGF 118
>GCFC_HUMAN (Q9Y5B6) GC-rich sequence DNA-binding factor homolog| Length = 917 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 215 GRTLPGPSLTTKENEQPGRGVDAGG--EGVLEPGNAVIP 105 G +L GP + PG G +AGG G EPGN + P Sbjct: 53 GESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKP 91
>RIHA_SALTY (Q8ZQY4) Pyrimidine-specific ribonucleoside hydrolase rihA (EC| 3.2.-.-) (Cytidine/uridine-specific hydrolase) Length = 311 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 227 FRSSGSSTI*AVE*ICSGWLSKRRHDGWGFVWGSGSDPWTDAWLL 361 FR+ G+ V + ++ + + WGFV DP T AWLL Sbjct: 205 FRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLHDPCTIAWLL 249
>RIHA_SALPA (Q5PM78) Pyrimidine-specific ribonucleoside hydrolase rihA (EC| 3.2.-.-) (Cytidine/uridine-specific hydrolase) Length = 311 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 227 FRSSGSSTI*AVE*ICSGWLSKRRHDGWGFVWGSGSDPWTDAWLL 361 FR+ G+ V + ++ + + WGFV DP T AWLL Sbjct: 205 FRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLHDPCTIAWLL 249
>VTS1_DEBHA (Q6BSL1) Protein VTS1| Length = 577 Score = 28.1 bits (61), Expect = 5.2 Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 1/116 (0%) Frame = -1 Query: 350 HPSMDQNQIPRQNPIHHGVSWIASRYKSTLLLI*SSCRSSEKRGRGRTLPGPSLTTKENE 171 H + P+Q + HG AS Y+ ++ +S ++ PG + + K E Sbjct: 427 HQQPHSHYFPQQGALQHGPFLPASAYEESINRSANSSSVPILVQHNKSPPGLTRSKKSTE 486 Query: 170 QPGRGVDAGGEGVLEPGNAVIPAGKTCAKP*TNLGAWRRPRKAMGAAACGEGI-WK 6 G+G +A +PA + N+ AW + + C + I WK Sbjct: 487 GLGQGANASSGSPQTTSTTSMPADISNPDLLNNIPAWLKLLRLHKYTDCLKDIYWK 542
>TCEA2_HUMAN (Q15560) Transcription elongation factor A protein 2 (Transcription| elongation factor S-II protein 2) (Testis-specific S-II) (Transcription elongation factor TFIIS.l) Length = 299 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/61 (29%), Positives = 27/61 (44%) Frame = -1 Query: 341 MDQNQIPRQNPIHHGVSWIASRYKSTLLLI*SSCRSSEKRGRGRTLPGPSLTTKENEQPG 162 M N + +Q+ ++ S KS L+ +S + +RGRG LP S E P Sbjct: 51 MSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPS 110 Query: 161 R 159 R Sbjct: 111 R 111
>UVRA_BRUSU (Q8G0I9) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -3 Query: 378 DYLIEPKSQASVHGSEPDPQTKPHPSWRLLDSQPLQIYSTAYIVELPLERKKRART 211 DY+++ A VHG + Q P +S + S A V +P ER+K ++T Sbjct: 578 DYVVDIGPAAGVHGGKVIAQGSPQDIMANTNSLTGKYLSGAMEVAVPAERRKISKT 633
>UVRA_BRUME (Q8YHC4) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -3 Query: 378 DYLIEPKSQASVHGSEPDPQTKPHPSWRLLDSQPLQIYSTAYIVELPLERKKRART 211 DY+++ A VHG + Q P +S + S A V +P ER+K ++T Sbjct: 578 DYVVDIGPAAGVHGGKVIAQGSPQDIMANTNSLTGKYLSGAMEVAVPAERRKISKT 633
>UVRA_BRUAB (P0C0Z2) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -3 Query: 378 DYLIEPKSQASVHGSEPDPQTKPHPSWRLLDSQPLQIYSTAYIVELPLERKKRART 211 DY+++ A VHG + Q P +S + S A V +P ER+K ++T Sbjct: 578 DYVVDIGPAAGVHGGKVIAQGSPQDIMANTNSLTGKYLSGAMEVAVPAERRKISKT 633
>UVRA_BRUA2 (Q2YPX5) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -3 Query: 378 DYLIEPKSQASVHGSEPDPQTKPHPSWRLLDSQPLQIYSTAYIVELPLERKKRART 211 DY+++ A VHG + Q P +S + S A V +P ER+K ++T Sbjct: 578 DYVVDIGPAAGVHGGKVIAQGSPQDIMANTNSLTGKYLSGAMEVAVPAERRKISKT 633
>CYB_LECMU (Q8HG55) Cytochrome b| Length = 385 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +2 Query: 299 HDGWGFVWGSGSDPWTDAWLLGSI 370 H G GF +GS P T AW+LG I Sbjct: 96 HIGRGFYYGSYRSPRTLAWILGVI 119
>ZBT7B_HUMAN (O15156) Zinc finger and BTB domain-containing protein 7B (Zinc| finger protein 67 homolog) (Zfp-67) (Zinc finger protein Th-POK) (T-helper-inducing POZ/Kruppel-like factor) (Kruppel-related zinc finger protein cKrox) (hcKrox) (Zinc finger and Length = 539 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -1 Query: 209 TLPGPSLTTKENEQPGRGVDAGGEGVLEPGNAVIPAGKTCAKP 81 T+P LT +E E GR +GG G PG++ P T + P Sbjct: 225 TVPAHPLTYEEEEVAGRVGSSGGSG---PGDSYSPPTGTASPP 264
>ARGD_LEPIN (P24087) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 406 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = -1 Query: 299 GVSWIASRYKSTLLLI*SSCRSSEKRGRGRTLPGPSLTTKENEQPGRGVDAGGEGVLEPG 120 G +A +Y + ++ S EK GR++ G SLT ++ + G G G +EP Sbjct: 119 GAFKLARKYAYSKSIVDPIILSLEKSFHGRSVSGMSLTGQDKIRKGYGELLKGIEFIEPN 178 Query: 119 N 117 N Sbjct: 179 N 179
>ARGD_LEPIC (Q72RH8) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 406 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = -1 Query: 299 GVSWIASRYKSTLLLI*SSCRSSEKRGRGRTLPGPSLTTKENEQPGRGVDAGGEGVLEPG 120 G +A +Y + ++ S EK GR++ G SLT ++ + G G G +EP Sbjct: 119 GAFKLARKYAYSKSIVDPIILSLEKSFHGRSVSGMSLTGQDKIRKGYGELLKGIEFIEPN 178 Query: 119 N 117 N Sbjct: 179 N 179
>CATA_PEA (P25890) Catalase (EC 1.11.1.6)| Length = 494 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -3 Query: 345 VHGSEPDPQTKPHPSWRLLD 286 VH +P+PQT +WR+LD Sbjct: 155 VHALKPNPQTHIQENWRILD 174
>HXD12_MOUSE (P23812) Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6)| Length = 279 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -1 Query: 236 SSEKRGRGRTLPGPSLTTKENEQPGRGVDAGGEGVLEPGNAVIPAGKTCA 87 +SE+R R R P + + G D G G PG+A + G CA Sbjct: 108 ASEERSRTRPPFAPESSLVHSALKGTKYDYAGVGRTAPGSATLLQGAPCA 157
>RIHA_SALTI (Q8Z8H0) Pyrimidine-specific ribonucleoside hydrolase rihA (EC| 3.2.-.-) (Cytidine/uridine-specific hydrolase) Length = 311 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = +2 Query: 227 FRSSGSSTI*AVE*ICSGWLSKRRHDGWGFVWGSGSDPWTDAWLL 361 FR G+ V + + + + WGFV DP T AWLL Sbjct: 205 FRDIGNPISTIVAELLDFFFEYHKDEKWGFVGAPLHDPCTIAWLL 249
>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor| Length = 424 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 294 LLDSQPLQIYSTAYIVELPLERKKRARTNTPGP 196 L+D QPL IY+T ++ LP E K + P P Sbjct: 308 LIDEQPLAIYATDKVL-LPKELFKASAVEAPAP 339
>SRBP1_HUMAN (P36956) Sterol regulatory element-binding protein 1 (SREBP-1)| (Sterol regulatory element-binding transcription factor 1) Length = 1147 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Frame = -1 Query: 338 DQNQIPRQNPIHHGVSWI-ASRYK-STLLLI*SSCRSSEKRGRGRTLPGPSLTTKENEQP 165 D P Q P H + SR TL+ + SC R LP PS TT P Sbjct: 466 DSKAKPEQRPSLHSRGMLDRSRLALCTLVFLCLSCNPLASLLGARGLPSPSDTTSVYHSP 525 Query: 164 GRGV 153 GR V Sbjct: 526 GRNV 529
>DPNP4_ARATH (Q84VY5) Probable SAL4 phosphatase (3'(2'),5'-bisphosphate| nucleotidase 4) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 4) (DPNPase 4) (Inositol-1,4-bisphosphate 1-phosphatase 4) (EC 3.1.3.57) (Inositol polyphosphate 1 Length = 345 Score = 27.3 bits (59), Expect = 8.9 Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 12/137 (8%) Frame = -2 Query: 379 RLSDRTQEPSIRPWIRTRSPDKTPSIMASLG*PAATNL----------LYCLYSRAAARA 230 RLS Q+ ++ +R++S DK+P A G A + LY + A Sbjct: 19 RLSQEVQKSLLQSDVRSKS-DKSPVTAADYGSQAVISHVLERELHPEPLYLVAEENAEDL 77 Query: 229 KKEGADEHSXXXXXXXXXXXXXXAESTPVARGFWNPATRSSPPAKLVQNPRRIWAPGGAR 50 K GA+E + N + K + + R + GG+ Sbjct: 78 HKNGAEEFLESITKLVNNALASDDS-------YANSSLSMDDVRKAIDHGR---SQGGSS 127 Query: 49 GRRWALRPAE--RGFGK 5 GR W L P + RGF K Sbjct: 128 GRHWILDPVDGTRGFVK 144
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Frame = -1 Query: 200 GP-SLTTKENEQPGRGVDAGGEGVLEPGNAVIPAGKTCAKP*TNLGAWRRPRKAMGAAAC 24 GP LT + E PG G +AG G E G G A GA R A G A Sbjct: 98 GPIDLTAADGEAPGAGGEAGAAGGSEAGGGA--GGAEAAGEARGAGAGRAAGAAGGRAGR 155 Query: 23 G 21 G Sbjct: 156 G 156
>SPY3_HUMAN (O43610) Sprouty homolog 3 (Spry-3)| Length = 288 Score = 24.3 bits (51), Expect(2) = 9.1 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -1 Query: 245 SCRSSEKRGRGRTLPGPSLTTKENEQPGRGVDAGGEGVLEPGNAVIPAG 99 S +S++R P PS + QPG GV +G L+ G A AG Sbjct: 91 STTASDQRLLASITPSPSGQSIIRTQPGAGVHPKADGALK-GEAEQSAG 138 Score = 21.6 bits (44), Expect(2) = 9.1 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%) Frame = -3 Query: 393 THAEKDYLIEPKSQASVHGSEPDPQTKPHPS-WRL 292 THA DY+ P + S P + H S W L Sbjct: 21 THASNDYVERPPAPCKQALSSPSLIVQTHKSDWSL 55 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,127,968 Number of Sequences: 219361 Number of extensions: 1249807 Number of successful extensions: 4090 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3935 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4085 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
