ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl05h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 309 4e-81
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 309 4e-81
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
4dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
5dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
6dbj|AK110607.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
8dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
9dbj|AP003563.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
10ref|XM_463301.1| Oryza sativa (japonica cultivar-group), predic... 72 1e-09
11ref|XM_799865.1| Trypanosoma cruzi strain CL Brener hypothetical... 46 0.082
12ref|NM_190328.1| Oryza sativa (japonica cultivar-group), predic... 44 0.33
13gb|BC080568.1| Homo sapiens cDNA clone IMAGE:6537117 44 0.33
14ref|NM_004165.1| Homo sapiens Ras-related associated with diabet... 44 0.33
15ref|XM_545636.2| PREDICTED: Canis familiaris similar to membrane... 44 0.33
16emb|AL359894.9| Human DNA sequence from clone RP11-379C1 on chro... 44 0.33
17gb|BC057815.1| Homo sapiens Ras-related associated with diabetes... 44 0.33
18dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
19gb|AC027131.6| Homo sapiens chromosome 16 clone RP11-317I8, comp... 44 0.33
20gb|AC009084.9| Homo sapiens chromosome 16 clone RP11-361L15, com... 44 0.33
21dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
22gb|BC011645.2| Homo sapiens Ras-related associated with diabetes... 44 0.33
23gb|U46165.1|HSU46165 Human Rad GTPase gene, complete cds 44 0.33
24gb|L24564.1|HUMRAD Human Rad mRNA, complete cds 44 0.33
25gb|AY650320.1| Macaca fascicularis achaete-scute complex protein... 42 1.3
26ref|XM_475549.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
27ref|XM_473800.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
28gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
29ref|XM_359978.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.3
30gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
31ref|XM_814422.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.3
32gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.3
33emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.3
34emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
35emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
37gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.3
38gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequ... 42 1.3
39dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.3
40dbj|AK120495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
41dbj|AK067259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
42gb|AC130533.2| Mus musculus BAC clone RP23-211B19 from 8, comple... 42 1.3
43gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 5.1
44ref|NM_187993.1| Oryza sativa (japonica cultivar-group), Ozsa841... 40 5.1
45gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 5.1
46gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 5.1
47gb|DQ216347.1| Taeniopygia guttata clone 0065P0027G05 activating... 40 5.1
48ref|NM_190290.1| Oryza sativa (japonica cultivar-group), predic... 40 5.1
49gb|AY466855.1| Macaca mulatta very low density lipoprotein recep... 40 5.1
50gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosom... 40 5.1
51gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.1
52gb|AY571622.1| Eimeria tenella RAPD-SCAR marker Tn-A09-1383 geno... 40 5.1
53gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete... 40 5.1
54gb|BT015199.1| Drosophila melanogaster RE69682 full insert cDNA 40 5.1
55gb|AC010922.10| Drosophila melanogaster clone BACR09H01, complet... 40 5.1
56gb|BC017199.2| Homo sapiens paired-like homeobox 2b, mRNA (cDNA ... 40 5.1
57ref|NM_178085.2| Mus musculus Rab6 interacting protein 2 (Rab6ip... 40 5.1
58gb|AE009249.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 5.1
59gb|AE008364.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 5.1
60ref|NM_001032907.1| Macaca mulatta very low density lipoprotein ... 40 5.1
61gb|AY378152.1| Rosa hybrid cultivar 'Kardinal' 1-aminocyclopropa... 40 5.1
62ref|XM_797989.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.1
63ref|XM_806757.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.1
64ref|NM_003924.2| Homo sapiens paired-like homeobox 2b (PHOX2B), ... 40 5.1
65gb|AC108951.4| Mus musculus BAC clone RP24-136D23 from 3, comple... 40 5.1
66gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 5.1
67ref|XM_855892.1| PREDICTED: Canis familiaris similar to Very low... 40 5.1
68ref|XM_533538.2| PREDICTED: Canis familiaris similar to Very low... 40 5.1
69gb|AC117667.9| Mus musculus chromosome 6, clone RP23-367C6, comp... 40 5.1
70gb|BC114888.1| Bos taurus cDNA clone MGC:139220 IMAGE:8091175, c... 40 5.1
71emb|AL450467.8| Human DNA sequence from clone RP11-320E16 on chr... 40 5.1
72gb|AF424541.1| Homo sapiens unknown mRNA 40 5.1
73emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 40 5.1
74emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.1
75emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.1
76emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 5.1
77emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 40 5.1
78emb|AL627281.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 5.1
79emb|AJ223999.1|AOPCZA363 Amycolatopsis orientalis cosmid PCZA363 40 5.1
80ref|NM_204880.1| Gallus gallus activating transcription factor 4... 40 5.1
81gb|AC010040.6| Drosophila melanogaster 3L BAC RP98-13E21 (Roswel... 40 5.1
82emb|CR620590.1| full-length cDNA clone CS0DD001YL04 of Neuroblas... 40 5.1
83dbj|AK092381.1| Homo sapiens cDNA FLJ35062 fis, clone OCBBF20191... 40 5.1
84gb|AE011634.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.1
85ref|NM_139949.2| Drosophila melanogaster CG7185-RA (CG7185), mRNA 40 5.1
86ref|NM_132953.1| Drosophila melanogaster CG13001-RA (CG13001), mRNA 40 5.1
87gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, comple... 40 5.1
88gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 5.1
89gb|AY058563.1| Drosophila melanogaster LD25239 full length cDNA 40 5.1
90gb|S73849.1| very low density lipoprotein receptor [human, heart... 40 5.1
91ref|NM_001018056.1| Homo sapiens very low density lipoprotein re... 40 5.1
92ref|NM_003383.3| Homo sapiens very low density lipoprotein recep... 40 5.1
93gb|AC153659.4| Mus musculus BAC clone RP23-283A3 from chromosome... 40 5.1
94dbj|AK035989.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 5.1
95gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.1
96dbj|AK048990.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 5.1
97gb|DQ067198.1| Homo sapiens very low density lipoprotein recepto... 40 5.1
98dbj|AK053824.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 5.1
99dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
100dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
101gb|BC090887.1| Homo sapiens hypothetical LOC401491, mRNA (cDNA c... 40 5.1
102gb|BC004474.2| Homo sapiens hypothetical LOC401491, mRNA (cDNA c... 40 5.1
103gb|AC156451.2| Volvox carteri clone JGIAOBO-45F10, complete sequ... 40 5.1
104dbj|D16532.2| Homo sapiens gene for very low density lipoprotein... 40 5.1
105gb|AF117979.1|AF117979 Homo sapiens homeodomain transcription fa... 40 5.1
106dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.1
107dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
108dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
109dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
110gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 5.1
111dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.1
112dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
113dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
114ref|XM_316961.2| Anopheles gambiae str. PEST ENSANGP00000006590 ... 40 5.1
115dbj|AK107988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
116ref|NM_212259.1| Eremothecium gossypii AFR576Cp (AFR576C), mRNA 40 5.1
117emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 5.1
118ref|NM_174489.2| Bos taurus very low density lipoprotein recepto... 40 5.1
119gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 5.1
120gb|AF016537.1|AF016537 Bos taurus very low density lipoprotein r... 40 5.1
121gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29... 40 5.1
122gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 ... 40 5.1
123dbj|D11100.1|RABVLDLR Oryctolagus cuniculus mRNA for very low de... 40 5.1
124dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
125dbj|D16494.1|HUMVLDLRB Homo sapiens mRNA for very low density li... 40 5.1
126dbj|D16493.1|HUMVLDLRA Homo sapiens mRNA for very low density li... 40 5.1
127gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.1
128gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.1
129gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
130gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, comple... 40 5.1
131dbj|AB208822.1| Homo sapiens mRNA for Very low-density lipoprote... 40 5.1
132emb|AJ421479.1| Mus musculus X-inactivation center region; segme... 40 5.1
133emb|AL669964.18| Mouse DNA sequence from clone RP23-11P22 on chr... 40 5.1
134dbj|AB013138.1| Gallus gallus mRNA for ATF4, complete cds 40 5.1
135dbj|D82344.1| Homo sapiens mRNA for NBPhox, complete cds 40 5.1
136dbj|AB015671.1| Homo sapiens NBPhox gene, complete cds 40 5.1
137dbj|AB070943.1| Streptomyces avermitilis polyketide-3 biosynthet... 40 5.1 
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  309 bits (156), Expect = 4e-81
 Identities = 219/240 (91%)
 Strand = Plus / Minus

                                                                         
Query: 142   ggcgccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgctg 201
             |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| 
Sbjct: 80924 ggcgccggcatggcgcggttcgaggtgggcggcaagtcggtggagggcgtggacctgctc 80865

                                                                         
Query: 202   cggcggcgccactggacggcgcgcctcgacttctggcccttcctcgccctctacgcgctc 261
             |||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 80864 cggcggcggcactgggcgtcgcgcctcgacttctggcccttcctcgcgctctacgcgctc 80805

                                                                         
Query: 262   tggctgctgctcgccgtcccggcgctcgacttcaccgacgccctcgtcatcctcggcgtg 321
             |||||| || |||  |||||||||||||||||||||||||| |||||| ||||||||| |
Sbjct: 80804 tggctggtggtcgtggtcccggcgctcgacttcaccgacgcactcgtcgtcctcggcgcg 80745

                                                                         
Query: 322   ctctccgcctcccacatccttgcgttcctcttcacagcttggtccgtcgatttccgggcg 381
             ||||||||||||||| |||| || ||||||||||| || ||||||||||| |||||||||
Sbjct: 80744 ctctccgcctcccacgtcctcgccttcctcttcaccgcgtggtccgtcgacttccgggcg 80685
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  309 bits (156), Expect = 4e-81
 Identities = 219/240 (91%)
 Strand = Plus / Minus

                                                                            
Query: 142      ggcgccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgctg 201
                |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| 
Sbjct: 19480212 ggcgccggcatggcgcggttcgaggtgggcggcaagtcggtggagggcgtggacctgctc 19480153

                                                                            
Query: 202      cggcggcgccactggacggcgcgcctcgacttctggcccttcctcgccctctacgcgctc 261
                |||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 19480152 cggcggcggcactgggcgtcgcgcctcgacttctggcccttcctcgcgctctacgcgctc 19480093

                                                                            
Query: 262      tggctgctgctcgccgtcccggcgctcgacttcaccgacgccctcgtcatcctcggcgtg 321
                |||||| || |||  |||||||||||||||||||||||||| |||||| ||||||||| |
Sbjct: 19480092 tggctggtggtcgtggtcccggcgctcgacttcaccgacgcactcgtcgtcctcggcgcg 19480033

                                                                            
Query: 322      ctctccgcctcccacatccttgcgttcctcttcacagcttggtccgtcgatttccgggcg 381
                ||||||||||||||| |||| || ||||||||||| || ||||||||||| |||||||||
Sbjct: 19480032 ctctccgcctcccacgtcctcgccttcctcttcaccgcgtggtccgtcgacttccgggcg 19479973



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 16       ccgcagcagcagcggcggcgg 36
                |||||||||||||||||||||
Sbjct: 10934853 ccgcagcagcagcggcggcgg 10934873



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 303     cctcgtcatcctcggcgtgctctcc 327
               ||||||| |||||||||||||||||
Sbjct: 1381519 cctcgtcctcctcggcgtgctctcc 1381543
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  127 bits (64), Expect = 3e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                           
Query: 250     ctctacgcgctctggctgctgctcgccgtcccggcgctcgacttcaccgacgccctcgtc 309
               |||||||||||||||||| || |||  |||| | ||||||||||||||||||||||||||
Sbjct: 8349713 ctctacgcgctctggctggtggtcgtggtcctgacgctcgacttcaccgacgccctcgtc 8349654

                                                                           
Query: 310     atcctcggcgtgctctccgcctcccacatccttgcgttcctcttcacagcttggtccgtc 369
                ||||| ||| |||||||||||||||  |||| || |||||||||||  | || ||||||
Sbjct: 8349653 gtcctctgcgcgctctccgcctcccatgtcctcgccttcctcttcaccacatgatccgtc 8349594

                           
Query: 370     gatttccgggcg 381
               ||||||||||||
Sbjct: 8349593 gatttccgggcg 8349582



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                           
Query: 146     ccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgctgcggc 205
               ||||||||||||| || ||||||  ||| |||| ||||||||| ||||||||||| ||| 
Sbjct: 8349802 ccggcatggcgcgatttgaggtgggcggtaagttggtggagggcgtggacctgcttcggt 8349743

                          
Query: 206     ggcgccactgg 216
               |||| ||||||
Sbjct: 8349742 ggcggcactgg 8349732
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>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0011N12
          Length = 158586

 Score =  127 bits (64), Expect = 3e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                        
Query: 250  ctctacgcgctctggctgctgctcgccgtcccggcgctcgacttcaccgacgccctcgtc 309
            |||||||||||||||||| || |||  |||| | ||||||||||||||||||||||||||
Sbjct: 2563 ctctacgcgctctggctggtggtcgtggtcctgacgctcgacttcaccgacgccctcgtc 2504

                                                                        
Query: 310  atcctcggcgtgctctccgcctcccacatccttgcgttcctcttcacagcttggtccgtc 369
             ||||| ||| |||||||||||||||  |||| || |||||||||||  | || ||||||
Sbjct: 2503 gtcctctgcgcgctctccgcctcccatgtcctcgccttcctcttcaccacatgatccgtc 2444

                        
Query: 370  gatttccgggcg 381
            ||||||||||||
Sbjct: 2443 gatttccgggcg 2432



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 146  ccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgctgcggc 205
            ||||||||||||| || ||||||  ||| |||| ||||||||| ||||||||||| ||| 
Sbjct: 2652 ccggcatggcgcgatttgaggtgggcggtaagttggtggagggcgtggacctgcttcggt 2593

                       
Query: 206  ggcgccactgg 216
            |||| ||||||
Sbjct: 2592 ggcggcactgg 2582
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>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0090H18
          Length = 174842

 Score =  127 bits (64), Expect = 3e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                          
Query: 250    ctctacgcgctctggctgctgctcgccgtcccggcgctcgacttcaccgacgccctcgtc 309
              |||||||||||||||||| || |||  |||| | ||||||||||||||||||||||||||
Sbjct: 126384 ctctacgcgctctggctggtggtcgtggtcctgacgctcgacttcaccgacgccctcgtc 126325

                                                                          
Query: 310    atcctcggcgtgctctccgcctcccacatccttgcgttcctcttcacagcttggtccgtc 369
               ||||| ||| |||||||||||||||  |||| || |||||||||||  | || ||||||
Sbjct: 126324 gtcctctgcgcgctctccgcctcccatgtcctcgccttcctcttcaccacatgatccgtc 126265

                          
Query: 370    gatttccgggcg 381
              ||||||||||||
Sbjct: 126264 gatttccgggcg 126253



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 146    ccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgctgcggc 205
              ||||||||||||| || ||||||  ||| |||| ||||||||| ||||||||||| ||| 
Sbjct: 126473 ccggcatggcgcgatttgaggtgggcggtaagttggtggagggcgtggacctgcttcggt 126414

                         
Query: 206    ggcgccactgg 216
              |||| ||||||
Sbjct: 126413 ggcggcactgg 126403
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>dbj|AK110607.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G12, full
           insert sequence
          Length = 1169

 Score =  127 bits (64), Expect = 3e-26
 Identities = 115/132 (87%)
 Strand = Plus / Plus

                                                                       
Query: 250 ctctacgcgctctggctgctgctcgccgtcccggcgctcgacttcaccgacgccctcgtc 309
           |||||||||||||||||| || |||  |||| | ||||||||||||||||||||||||||
Sbjct: 646 ctctacgcgctctggctggtggtcgtggtcctgacgctcgacttcaccgacgccctcgtc 705

                                                                       
Query: 310 atcctcggcgtgctctccgcctcccacatccttgcgttcctcttcacagcttggtccgtc 369
            ||||| ||| |||||||||||||||  |||| || |||||||||||  | || ||||||
Sbjct: 706 gtcctctgcgcgctctccgcctcccatgtcctcgccttcctcttcaccacatgatccgtc 765

                       
Query: 370 gatttccgggcg 381
           ||||||||||||
Sbjct: 766 gatttccgggcg 777



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 146 ccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgctgcggc 205
           ||||||||||||| || ||||||  ||| |||| ||||||||| ||||||||||| ||| 
Sbjct: 557 ccggcatggcgcgatttgaggtgggcggtaagttggtggagggcgtggacctgcttcggt 616

                      
Query: 206 ggcgccactgg 216
           |||| ||||||
Sbjct: 617 ggcggcactgg 627
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                            
Query: 284      cgctcgacttcaccgacgccctcgtcatcctcggcgtgctctccgcctcccacatccttg 343
                |||||||||||||||||||||||||| ||||| ||| |||||| ||||||||  |||| |
Sbjct: 18437163 cgctcgacttcaccgacgccctcgtcgtcctctgcgcgctctctgcctcccatgtcctcg 18437104

                                                      
Query: 344      cgttcctcttcacagcttggtccgtcgatttccgggcg 381
                | ||||||||||| ||  |||  ||||| |||||||||
Sbjct: 18437103 ccttcctcttcactgcacggtttgtcgacttccgggcg 18437066



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                       
Query: 146      ccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgct 200
                ||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||||
Sbjct: 18437257 ccggcatggcgcggttcgaggtggacggtaagttggtagagggcgtggacctgct 18437203



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 200      tgcggcggcgccactggacggcgcgc 225
                ||||||||||||||||| ||||||||
Sbjct: 39314076 tgcggcggcgccactggtcggcgcgc 39314051



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 18       gcagcagcagcggcggcgga 37
                ||||||||||||||||||||
Sbjct: 39072947 gcagcagcagcggcggcgga 39072966



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 193      gacctgctgcggcggcgcca 212
                ||||||||||||||||||||
Sbjct: 11206055 gacctgctgcggcggcgcca 11206074



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      cgcagcagcagcggcggcgg 36
               ||||||||||||||||||||
Sbjct: 8985382 cgcagcagcagcggcggcgg 8985401
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>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1003B09
          Length = 155263

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                         
Query: 284   cgctcgacttcaccgacgccctcgtcatcctcggcgtgctctccgcctcccacatccttg 343
             |||||||||||||||||||||||||| ||||| ||| |||||| ||||||||  |||| |
Sbjct: 60921 cgctcgacttcaccgacgccctcgtcgtcctctgcgcgctctctgcctcccatgtcctcg 60862

                                                   
Query: 344   cgttcctcttcacagcttggtccgtcgatttccgggcg 381
             | ||||||||||| ||  |||  ||||| |||||||||
Sbjct: 60861 ccttcctcttcactgcacggtttgtcgacttccgggcg 60824



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 146   ccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgct 200
             ||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||||
Sbjct: 61015 ccggcatggcgcggttcgaggtggacggtaagttggtagagggcgtggacctgct 60961
to top
>dbj|AP003563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1168H06
          Length = 185600

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                         
Query: 284   cgctcgacttcaccgacgccctcgtcatcctcggcgtgctctccgcctcccacatccttg 343
             |||||||||||||||||||||||||| ||||| ||| |||||| ||||||||  |||| |
Sbjct: 36380 cgctcgacttcaccgacgccctcgtcgtcctctgcgcgctctctgcctcccatgtcctcg 36321

                                                   
Query: 344   cgttcctcttcacagcttggtccgtcgatttccgggcg 381
             | ||||||||||| ||  |||  ||||| |||||||||
Sbjct: 36320 ccttcctcttcactgcacggtttgtcgacttccgggcg 36283



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 146   ccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgct 200
             ||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||||
Sbjct: 36474 ccggcatggcgcggttcgaggtggacggtaagttggtagagggcgtggacctgct 36420
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>ref|XM_463301.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 690

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 284 cgctcgacttcaccgacgccctcgtcatcctcggcgtgctctccgcctccca 335
           |||||||||||||||||||||||||| ||||| ||| |||||| ||||||||
Sbjct: 53  cgctcgacttcaccgacgccctcgtcgtcctctgcgcgctctctgcctccca 2



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 146 ccggcatggcgcggttcgaggtgaacggcaagtcggtggagggggtggacctgct 200
           ||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||||
Sbjct: 147 ccggcatggcgcggttcgaggtggacggtaagttggtagagggcgtggacctgct 93
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>ref|XM_799865.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503627.9) partial mRNA
          Length = 1092

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 14  caccgcagcagcagcggcggcgg 36
           |||||||||||||||||||||||
Sbjct: 134 caccgcagcagcagcggcggcgg 156
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>ref|NM_190328.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1599

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 200  tgcggcggcgccactggacggcgcgc 225
            ||||||||||||||||| ||||||||
Sbjct: 1429 tgcggcggcgccactggtcggcgcgc 1404
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>gb|BC080568.1| Homo sapiens cDNA clone IMAGE:6537117
          Length = 1918

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 15   accgcagcagcagcggcggcgg 36
            ||||||||||||||||||||||
Sbjct: 1126 accgcagcagcagcggcggcgg 1105
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>ref|NM_004165.1| Homo sapiens Ras-related associated with diabetes (RRAD), mRNA
          Length = 1443

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 18 gcagcagcagcggcggcggaaa 39
          ||||||||||||||||||||||
Sbjct: 7  gcagcagcagcggcggcggaaa 28
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>ref|XM_545636.2| PREDICTED: Canis familiaris similar to membrane-associated ring
           finger (C3HC4) 4 (LOC488515), mRNA
          Length = 1572

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 259 ctctggctgctgctcgccgtcc 280
           ||||||||||||||||||||||
Sbjct: 48  ctctggctgctgctcgccgtcc 27
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>emb|AL359894.9| Human DNA sequence from clone RP11-379C1 on chromosome 1 Contains the
             5' end of gene KIAA1365 and a CpG island, complete
             sequence
          Length = 161040

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 15    accgcagcagcagcggcggcgg 36
             ||||||||||||||||||||||
Sbjct: 91792 accgcagcagcagcggcggcgg 91771
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>gb|BC057815.1| Homo sapiens Ras-related associated with diabetes, mRNA (cDNA
          clone MGC:71750 IMAGE:30341066), complete cds
          Length = 1482

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 18 gcagcagcagcggcggcggaaa 39
          ||||||||||||||||||||||
Sbjct: 26 gcagcagcagcggcggcggaaa 47
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>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1065G12
          Length = 165006

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 200    tgcggcggcgccactggacggcgcgc 225
              ||||||||||||||||| ||||||||
Sbjct: 115782 tgcggcggcgccactggtcggcgcgc 115757
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>gb|AC027131.6| Homo sapiens chromosome 16 clone RP11-317I8, complete sequence
          Length = 206102

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 18     gcagcagcagcggcggcggaaa 39
              ||||||||||||||||||||||
Sbjct: 124121 gcagcagcagcggcggcggaaa 124100
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>gb|AC009084.9| Homo sapiens chromosome 16 clone RP11-361L15, complete sequence
          Length = 183864

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    gcagcagcagcggcggcggaaa 39
             ||||||||||||||||||||||
Sbjct: 40362 gcagcagcagcggcggcggaaa 40341
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>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0551C06
          Length = 149829

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 200   tgcggcggcgccactggacggcgcgc 225
             ||||||||||||||||| ||||||||
Sbjct: 95322 tgcggcggcgccactggtcggcgcgc 95297
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>gb|BC011645.2| Homo sapiens Ras-related associated with diabetes, mRNA (cDNA
          clone MGC:12812 IMAGE:4299345), complete cds
          Length = 1478

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 18 gcagcagcagcggcggcggaaa 39
          ||||||||||||||||||||||
Sbjct: 18 gcagcagcagcggcggcggaaa 39
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>gb|U46165.1|HSU46165 Human Rad GTPase gene, complete cds
          Length = 5510

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 18   gcagcagcagcggcggcggaaa 39
            ||||||||||||||||||||||
Sbjct: 1726 gcagcagcagcggcggcggaaa 1747
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>gb|L24564.1|HUMRAD Human Rad mRNA, complete cds
          Length = 1443

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 18 gcagcagcagcggcggcggaaa 39
          ||||||||||||||||||||||
Sbjct: 7  gcagcagcagcggcggcggaaa 28
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>gb|AY650320.1| Macaca fascicularis achaete-scute complex protein 1 mRNA, partial
           cds
          Length = 671

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 14  caccgcagcagcagcggcggc 34
           |||||||||||||||||||||
Sbjct: 96  caccgcagcagcagcggcggc 116
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>ref|XM_475549.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1158

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 303 cctcgtcatcctcggcgtgctctcc 327
           ||||||| |||||||||||||||||
Sbjct: 511 cctcgtcctcctcggcgtgctctcc 487
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>ref|XM_473800.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3267

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 ccgcagcagcagcggcggcgg 36
          |||||||||||||||||||||
Sbjct: 42 ccgcagcagcagcggcggcgg 62
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>gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBb0061M13, complete sequence
          Length = 174910

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     ccgcagcagcagcggcggcgg 36
              |||||||||||||||||||||
Sbjct: 104057 ccgcagcagcagcggcggcgg 104077
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>ref|XM_359978.1| Magnaporthe grisea 70-15 hypothetical protein (MG05353.4) partial
            mRNA
          Length = 1587

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 16   ccgcagcagcagcggcggcgg 36
            |||||||||||||||||||||
Sbjct: 1083 ccgcagcagcagcggcggcgg 1063
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 303   cctcgtcatcctcggcgtgctctcc 327
             ||||||| |||||||||||||||||
Sbjct: 43181 cctcgtcctcctcggcgtgctctcc 43205
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>ref|XM_814422.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507641.110) partial mRNA
          Length = 1815

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 18  gcagcagcagcggcggcggaa 38
           |||||||||||||||||||||
Sbjct: 576 gcagcagcagcggcggcggaa 596
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 159     gttcgaggtgaacggcaagtcggtg 183
               |||||||||| ||||||||||||||
Sbjct: 3240034 gttcgaggtggacggcaagtcggtg 3240058
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 305     tcgtcatcctcggcgtgctctccgc 329
               |||||||||||||||||||| ||||
Sbjct: 2917538 tcgtcatcctcggcgtgctcgccgc 2917514
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>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
             complete sequence
          Length = 129037

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    ccgcagcagcagcggcggcgg 36
             |||||||||||||||||||||
Sbjct: 93800 ccgcagcagcagcggcggcgg 93780
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>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09,
             complete sequence
          Length = 152732

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    ccgcagcagcagcggcggcgg 36
             |||||||||||||||||||||
Sbjct: 21823 ccgcagcagcagcggcggcgg 21803
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 16       ccgcagcagcagcggcggcgg 36
                |||||||||||||||||||||
Sbjct: 30618092 ccgcagcagcagcggcggcgg 30618072
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 309     catcctcggcgtgctctccgc 329
               |||||||||||||||||||||
Sbjct: 3202090 catcctcggcgtgctctccgc 3202070



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     gctcgccgtcccggcgctcg 289
               ||||||||||||||||||||
Sbjct: 4393782 gctcgccgtcccggcgctcg 4393763
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>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence
          Length = 38975

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    ccgcagcagcagcggcggcgg 36
             |||||||||||||||||||||
Sbjct: 14542 ccgcagcagcagcggcggcgg 14522
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 143    gcgccggcatggcgcggttcg 163
              |||||||||||||||||||||
Sbjct: 407473 gcgccggcatggcgcggttcg 407493
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>dbj|AK120495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120H18, full
           insert sequence
          Length = 3659

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 16  ccgcagcagcagcggcggcgg 36
           |||||||||||||||||||||
Sbjct: 189 ccgcagcagcagcggcggcgg 209
to top
>dbj|AK067259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095I07, full
           insert sequence
          Length = 3596

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 16  ccgcagcagcagcggcggcgg 36
           |||||||||||||||||||||
Sbjct: 228 ccgcagcagcagcggcggcgg 248
to top
>gb|AC130533.2| Mus musculus BAC clone RP23-211B19 from 8, complete sequence
          Length = 203431

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 115   ggtctcccctccgatccgggc 135
             |||||||||||||||||||||
Sbjct: 83593 ggtctcccctccgatccgggc 83573
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 49      gcgtcggccgcccgcacggccacc 72
               ||||||||||| ||||||||||||
Sbjct: 3097992 gcgtcggccgcacgcacggccacc 3098015
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>ref|NM_187993.1| Oryza sativa (japonica cultivar-group), Ozsa8413 predicted mRNA
          Length = 303

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 17 cgcagcagcagcggcggcgg 36
          ||||||||||||||||||||
Sbjct: 5  cgcagcagcagcggcggcgg 24
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    ctgctgctcgccgtcccggc 284
              ||||||||||||||||||||
Sbjct: 411200 ctgctgctcgccgtcccggc 411181
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ccgacgccctcgtcatcctc 315
              ||||||||||||||||||||
Sbjct: 768880 ccgacgccctcgtcatcctc 768899
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>gb|DQ216347.1| Taeniopygia guttata clone 0065P0027G05 activating transcription
           factor 4 variant 3-like mRNA, complete sequence
          Length = 1367

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 17  cgcagcagcagcggcggcgg 36
           ||||||||||||||||||||
Sbjct: 158 cgcagcagcagcggcggcgg 177
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>ref|NM_190290.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 447

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  gcagcagcagcggcggcgga 37
           ||||||||||||||||||||
Sbjct: 87  gcagcagcagcggcggcgga 106
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>gb|AY466855.1| Macaca mulatta very low density lipoprotein receptor mRNA, complete
           cds
          Length = 2622

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 22  gcgctctggctgctgctcgc 41
to top
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08
              map E1363S, complete sequence
          Length = 140681

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 19     cagcagcagcggcggcggaaaaac 42
              |||||||||||||||||| |||||
Sbjct: 101373 cagcagcagcggcggcggtaaaac 101350
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ccgccgccgatccgatcccg 101
              ||||||||||||||||||||
Sbjct: 655915 ccgccgccgatccgatcccg 655896
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>gb|AY571622.1| Eimeria tenella RAPD-SCAR marker Tn-A09-1383 genomic sequence
          Length = 1383

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  gcagcagcagcggcggcgga 37
           ||||||||||||||||||||
Sbjct: 839 gcagcagcagcggcggcgga 820
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>gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete sequence
          Length = 179077

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    gcaccgcagcagcagcggcggcgg 36
             |||| |||||||||||||||||||
Sbjct: 27649 gcactgcagcagcagcggcggcgg 27626
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>gb|BT015199.1| Drosophila melanogaster RE69682 full insert cDNA
          Length = 1793

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 13   gcaccgcagcagcagcggcggcgg 36
            |||| |||||||||||||||||||
Sbjct: 1029 gcactgcagcagcagcggcggcgg 1006
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>gb|AC010922.10| Drosophila melanogaster clone BACR09H01, complete sequence
          Length = 152607

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     gcaccgcagcagcagcggcggcgg 36
              |||| |||||||||||||||||||
Sbjct: 125190 gcactgcagcagcagcggcggcgg 125167
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>gb|BC017199.2| Homo sapiens paired-like homeobox 2b, mRNA (cDNA clone MGC:1678
           IMAGE:3161284), complete cds
          Length = 1497

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 17  cgcagcagcagcggcggcgg 36
           ||||||||||||||||||||
Sbjct: 816 cgcagcagcagcggcggcgg 835
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>ref|NM_178085.2| Mus musculus Rab6 interacting protein 2 (Rab6ip2), transcript
          variant 2, mRNA
          Length = 2306

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 15 accgcagcagcagcggcggc 34
          ||||||||||||||||||||
Sbjct: 40 accgcagcagcagcggcggc 59
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>gb|AE009249.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 19 of
            187 of the complete sequence
          Length = 10051

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   gcggcggcggaaaaaccctc 46
            ||||||||||||||||||||
Sbjct: 4638 gcggcggcggaaaaaccctc 4619
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>gb|AE008364.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 168 of
            187 of the complete sequence
          Length = 10029

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   gcggcggcggaaaaaccctc 46
            ||||||||||||||||||||
Sbjct: 5424 gcggcggcggaaaaaccctc 5443
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>ref|NM_001032907.1| Macaca mulatta very low density lipoprotein receptor (VLDLR), mRNA
          Length = 2622

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 22  gcgctctggctgctgctcgc 41
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>gb|AY378152.1| Rosa hybrid cultivar 'Kardinal' 1-aminocyclopropane-1-carboxylate
           synthase mRNA, complete cds
          Length = 1750

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  gcagcagcagcggcggcgga 37
           ||||||||||||||||||||
Sbjct: 138 gcagcagcagcggcggcgga 157
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>ref|XM_797989.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053503509.10) partial mRNA
          Length = 2445

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   gcagcagcagcggcggcgga 37
            ||||||||||||||||||||
Sbjct: 1345 gcagcagcagcggcggcgga 1364
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>ref|XM_806757.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506567.34) partial mRNA
          Length = 1431

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   cagcagcagcggcggcggaa 38
            ||||||||||||||||||||
Sbjct: 1388 cagcagcagcggcggcggaa 1407
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>ref|NM_003924.2| Homo sapiens paired-like homeobox 2b (PHOX2B), mRNA
          Length = 3029

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   cgcagcagcagcggcggcgg 36
            ||||||||||||||||||||
Sbjct: 1080 cgcagcagcagcggcggcgg 1099
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>gb|AC108951.4| Mus musculus BAC clone RP24-136D23 from 3, complete sequence
          Length = 148219

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   ttcctcttcacagcttggtc 365
             ||||||||||||||||||||
Sbjct: 88495 ttcctcttcacagcttggtc 88514
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     cgcagcagcagcggcggcgg 36
              ||||||||||||||||||||
Sbjct: 166992 cgcagcagcagcggcggcgg 166973
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>ref|XM_855892.1| PREDICTED: Canis familiaris similar to Very low-density lipoprotein
           receptor precursor (VLDL receptor), transcript variant 2
           (LOC476336), mRNA
          Length = 2867

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 22  gcgctctggctgctgctcgc 41
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>ref|XM_533538.2| PREDICTED: Canis familiaris similar to Very low-density lipoprotein
           receptor precursor (VLDL receptor), transcript variant 1
           (LOC476336), mRNA
          Length = 3331

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 123 gcgctctggctgctgctcgc 142
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>gb|AC117667.9| Mus musculus chromosome 6, clone RP23-367C6, complete sequence
          Length = 134538

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     accgcagcagcagcggcggc 34
              ||||||||||||||||||||
Sbjct: 102936 accgcagcagcagcggcggc 102955
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>gb|BC114888.1| Bos taurus cDNA clone MGC:139220 IMAGE:8091175, complete cds
          Length = 1336

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 18 gcagcagcagcggcggcgga 37
          ||||||||||||||||||||
Sbjct: 60 gcagcagcagcggcggcgga 79
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>emb|AL450467.8| Human DNA sequence from clone RP11-320E16 on chromosome 9 Contains the
             5' end of a novel gene (FLJ35024), the VLDLR gene for very
             low density lipoprotein receptor and a CpG island,
             complete sequence
          Length = 74961

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   gcgctctggctgctgctcgc 275
             ||||||||||||||||||||
Sbjct: 28523 gcgctctggctgctgctcgc 28542
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>gb|AF424541.1| Homo sapiens unknown mRNA
          Length = 1393

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 628 gcgctctggctgctgctcgc 609
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>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cgcagcagcagcggcggcgg 36
              ||||||||||||||||||||
Sbjct: 334072 cgcagcagcagcggcggcgg 334091
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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   gccggcatggcgcggttcga 164
             ||||||||||||||||||||
Sbjct: 99365 gccggcatggcgcggttcga 99384
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 82      ccgccgccgatccgatcccg 101
               ||||||||||||||||||||
Sbjct: 2849241 ccgccgccgatccgatcccg 2849260
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 268    ctgctcgccgtcccggcgctcgac 291
              |||||||||| |||||||||||||
Sbjct: 215381 ctgctcgccgacccggcgctcgac 215404
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 54     ggccgcccgcacggccaccgacgc 77
              ||||| ||||||||||||||||||
Sbjct: 160716 ggccgaccgcacggccaccgacgc 160693
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>emb|AL627281.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 17/20
          Length = 265050

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ccgcagcagcagcggcggcg 35
              ||||||||||||||||||||
Sbjct: 126681 ccgcagcagcagcggcggcg 126662
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>emb|AJ223999.1|AOPCZA363 Amycolatopsis orientalis cosmid PCZA363
          Length = 34244

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 289   gacttcaccgacgccctcgtcatcctcg 316
             ||||||||||||||||||| | ||||||
Sbjct: 20784 gacttcaccgacgccctcggcgtcctcg 20757
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>ref|NM_204880.1| Gallus gallus activating transcription factor 4 (tax-responsive
           enhancer element B67) (ATF4), mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 17  cgcagcagcagcggcggcgg 36
           ||||||||||||||||||||
Sbjct: 149 cgcagcagcagcggcggcgg 168
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>gb|AC010040.6| Drosophila melanogaster 3L BAC RP98-13E21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 159672

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 196   ctgctgcggcggcgccactggacg 219
             |||||||||||||| |||||||||
Sbjct: 75519 ctgctgcggcggcggcactggacg 75542
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>emb|CR620590.1| full-length cDNA clone CS0DD001YL04 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 3071

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 93  gcgctctggctgctgctcgc 112
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>dbj|AK092381.1| Homo sapiens cDNA FLJ35062 fis, clone OCBBF2019195, highly similar
           to VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR
          Length = 2915

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 68  gcgctctggctgctgctcgc 87
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>gb|AE011634.1| Xanthomonas axonopodis pv. citri str. 306,  section 12 of 469 of the
            complete genome
          Length = 13286

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  gctctggctgctgctcgccg 277
            ||||||||||||||||||||
Sbjct: 7508 gctctggctgctgctcgccg 7489
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>ref|NM_139949.2| Drosophila melanogaster CG7185-RA (CG7185), mRNA
          Length = 2853

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 196 ctgctgcggcggcgccactggacg 219
           |||||||||||||| |||||||||
Sbjct: 929 ctgctgcggcggcggcactggacg 906
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>ref|NM_132953.1| Drosophila melanogaster CG13001-RA (CG13001), mRNA
          Length = 1783

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 13   gcaccgcagcagcagcggcggcgg 36
            |||| |||||||||||||||||||
Sbjct: 1028 gcactgcagcagcagcggcggcgg 1005
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>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence
          Length = 187067

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     cgcagcagcagcggcggcgg 36
              ||||||||||||||||||||
Sbjct: 102742 cgcagcagcagcggcggcgg 102723
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      gcgtcggccgcccgcacggc 68
               ||||||||||||||||||||
Sbjct: 3873252 gcgtcggccgcccgcacggc 3873233
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>gb|AY058563.1| Drosophila melanogaster LD25239 full length cDNA
          Length = 2858

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 196 ctgctgcggcggcgccactggacg 219
           |||||||||||||| |||||||||
Sbjct: 922 ctgctgcggcggcggcactggacg 899
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>gb|S73849.1| very low density lipoprotein receptor [human, heart, mRNA, 3355 nt]
          Length = 3355

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 107 gcgctctggctgctgctcgc 126
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>ref|NM_001018056.1| Homo sapiens very low density lipoprotein receptor (VLDLR),
           transcript variant 2, mRNA
          Length = 3562

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 419 gcgctctggctgctgctcgc 438
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>ref|NM_003383.3| Homo sapiens very low density lipoprotein receptor (VLDLR),
           transcript variant 1, mRNA
          Length = 3646

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 419 gcgctctggctgctgctcgc 438
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>gb|AC153659.4| Mus musculus BAC clone RP23-283A3 from chromosome 3, complete sequence
          Length = 220855

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    ttcctcttcacagcttggtc 365
              ||||||||||||||||||||
Sbjct: 181754 ttcctcttcacagcttggtc 181773
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>dbj|AK035989.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
          enriched library, clone:9630025C19
          product:Rab6-interacting protein 2, full insert
          sequence
          Length = 2057

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 15 accgcagcagcagcggcggc 34
          ||||||||||||||||||||
Sbjct: 40 accgcagcagcagcggcggc 59
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 179     cggtggagggggtggacctgctgc 202
               ||||||||| ||||||||||||||
Sbjct: 1474011 cggtggaggtggtggacctgctgc 1473988
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>dbj|AK048990.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
          enriched library, clone:C230088K24
          product:Rab6-interacting protein 2, full insert
          sequence
          Length = 2306

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 15 accgcagcagcagcggcggc 34
          ||||||||||||||||||||
Sbjct: 40 accgcagcagcagcggcggc 59
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>gb|DQ067198.1| Homo sapiens very low density lipoprotein receptor (VLDLR) gene,
            complete cds
          Length = 36686

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  gcgctctggctgctgctcgc 275
            ||||||||||||||||||||
Sbjct: 2407 gcgctctggctgctgctcgc 2426
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>dbj|AK053824.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length
          enriched library, clone:E130311C19
          product:Rab6-interacting protein 2, full insert
          sequence
          Length = 1433

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 15 accgcagcagcagcggcggc 34
          ||||||||||||||||||||
Sbjct: 37 accgcagcagcagcggcggc 56
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 19       cagcagcagcggcggcggaaaaac 42
                |||||||||||||||||| |||||
Sbjct: 19840335 cagcagcagcggcggcggtaaaac 19840312
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 19       cagcagcagcggcggcggaa 38
                ||||||||||||||||||||
Sbjct: 22798866 cagcagcagcggcggcggaa 22798847
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>gb|BC090887.1| Homo sapiens hypothetical LOC401491, mRNA (cDNA clone
           IMAGE:30383148)
          Length = 3032

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 558 gcgctctggctgctgctcgc 539
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>gb|BC004474.2| Homo sapiens hypothetical LOC401491, mRNA (cDNA clone
           IMAGE:3928143)
          Length = 928

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 163 gcgctctggctgctgctcgc 144
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>gb|AC156451.2| Volvox carteri clone JGIAOBO-45F10, complete sequence
          Length = 35415

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   gcagcagcagcggcggcgga 37
            ||||||||||||||||||||
Sbjct: 1141 gcagcagcagcggcggcgga 1122
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>dbj|D16532.2| Homo sapiens gene for very low density lipoprotein receptor, complete
            cds
          Length = 6782

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  gcgctctggctgctgctcgc 275
            ||||||||||||||||||||
Sbjct: 1334 gcgctctggctgctgctcgc 1353
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>gb|AF117979.1|AF117979 Homo sapiens homeodomain transcription factor NBPHOX (PMX2B) gene,
            complete cds
          Length = 4885

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   cgcagcagcagcggcggcgg 36
            ||||||||||||||||||||
Sbjct: 2936 cgcagcagcagcggcggcgg 2955
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 50      cgtcggccgcccgcacggcc 69
               ||||||||||||||||||||
Sbjct: 2781456 cgtcggccgcccgcacggcc 2781437
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>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506A10
          Length = 145265

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    gcagcagcagcggcggcgga 37
             ||||||||||||||||||||
Sbjct: 90927 gcagcagcagcggcggcgga 90946
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>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0453A06
          Length = 154378

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    cgcagcagcagcggcggcgg 36
             ||||||||||||||||||||
Sbjct: 93137 cgcagcagcagcggcggcgg 93156
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>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0499C11
          Length = 151369

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    cgcagcagcagcggcggcgg 36
             ||||||||||||||||||||
Sbjct: 14389 cgcagcagcagcggcggcgg 14408
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 16      ccgcagcagcagcggcggcg 35
               ||||||||||||||||||||
Sbjct: 3537145 ccgcagcagcagcggcggcg 3537164
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                           
Query: 70      accgacgcacccccgccgccgatccgatcccgtcgagaccgagc 113
               |||||||||||| ||||||||| |||| |||| |||| ||||||
Sbjct: 3969597 accgacgcacccgcgccgccga-ccgagcccgccgaggccgagc 3969555
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>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1146F03
          Length = 137047

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   gacctgctgcggcggcgcca 212
             ||||||||||||||||||||
Sbjct: 97848 gacctgctgcggcggcgcca 97867
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>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1116H04
          Length = 140142

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     cagcagcagcggcggcggaa 38
              ||||||||||||||||||||
Sbjct: 125508 cagcagcagcggcggcggaa 125489
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>ref|XM_316961.2| Anopheles gambiae str. PEST ENSANGP00000006590
           (ENSANGG00000004992), partial mRNA
          Length = 10824

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  gcagcagcagcggcggcgga 37
           ||||||||||||||||||||
Sbjct: 745 gcagcagcagcggcggcgga 764
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>dbj|AK107988.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-F03, full
           insert sequence
          Length = 918

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 17  cgcagcagcagcggcggcgg 36
           ||||||||||||||||||||
Sbjct: 130 cgcagcagcagcggcggcgg 149
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>ref|NM_212259.1| Eremothecium gossypii AFR576Cp (AFR576C), mRNA
          Length = 309

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 179 cggtggagggggtggacctgctgc 202
           ||||||||| ||||||||||||||
Sbjct: 248 cggtggaggtggtggacctgctgc 271
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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     gcctcgacttctggcccttc 243
               ||||||||||||||||||||
Sbjct: 1338897 gcctcgacttctggcccttc 1338878
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>ref|NM_174489.2| Bos taurus very low density lipoprotein receptor (vldlr), mRNA
          Length = 3113

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 118 gcgctctggctgctgctcgc 137
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 16      ccgcagcagcagcggcggcg 35
               ||||||||||||||||||||
Sbjct: 4084328 ccgcagcagcagcggcggcg 4084309
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>gb|AF016537.1|AF016537 Bos taurus very low density lipoprotein receptor VLDL-R2 mRNA,
           complete cds
          Length = 3113

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 118 gcgctctggctgctgctcgc 137
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>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete
              sequence
          Length = 281917

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 196    ctgctgcggcggcgccactggacg 219
              |||||||||||||| |||||||||
Sbjct: 262633 ctgctgcggcggcggcactggacg 262656
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>gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 of 74 of the
            complete sequence
          Length = 298703

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 13   gcaccgcagcagcagcggcggcgg 36
            |||| |||||||||||||||||||
Sbjct: 3989 gcactgcagcagcagcggcggcgg 4012
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>dbj|D11100.1|RABVLDLR Oryctolagus cuniculus mRNA for very low density lipoprotein
           receptor, complete cds
          Length = 3209

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 42  gcgctctggctgctgctcgc 61
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>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0035H10
          Length = 109475

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    gacctgctgcggcggcgcca 212
              ||||||||||||||||||||
Sbjct: 104788 gacctgctgcggcggcgcca 104807
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>dbj|D16494.1|HUMVLDLRB Homo sapiens mRNA for very low density lipoprotein receptor,
           complete cds
          Length = 3155

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 23  gcgctctggctgctgctcgc 42
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>dbj|D16493.1|HUMVLDLRA Homo sapiens mRNA for very low density lipoprotein receptor,
           complete cds
          Length = 3308

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 92  gcgctctggctgctgctcgc 111
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 300     cgccctcgtcatcctcggcgtgct 323
               |||| |||||||||||||||||||
Sbjct: 4723751 cgccatcgtcatcctcggcgtgct 4723774
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 300     cgccctcgtcatcctcggcg 319
               ||||||||||||||||||||
Sbjct: 1624338 cgccctcgtcatcctcggcg 1624357
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 19       cagcagcagcggcggcggaaaaac 42
                |||||||||||||||||| |||||
Sbjct: 19851611 cagcagcagcggcggcggtaaaac 19851588
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>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence
          Length = 163235

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     accgcagcagcagcggcggc 34
              ||||||||||||||||||||
Sbjct: 144618 accgcagcagcagcggcggc 144599
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>dbj|AB208822.1| Homo sapiens mRNA for Very low-density lipoprotein receptor
           precursor variant protein
          Length = 3262

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgctctggctgctgctcgc 275
           ||||||||||||||||||||
Sbjct: 194 gcgctctggctgctgctcgc 213
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>emb|AJ421479.1| Mus musculus X-inactivation center region; segment 2/3
          Length = 252150

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    gcagcagcagcggcggcgga 37
             ||||||||||||||||||||
Sbjct: 56084 gcagcagcagcggcggcgga 56103
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>emb|AL669964.18| Mouse DNA sequence from clone RP23-11P22 on chromosome X, complete
              sequence
          Length = 229724

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     gcagcagcagcggcggcgga 37
              ||||||||||||||||||||
Sbjct: 227582 gcagcagcagcggcggcgga 227563
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>dbj|AB013138.1| Gallus gallus mRNA for ATF4, complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 17  cgcagcagcagcggcggcgg 36
           ||||||||||||||||||||
Sbjct: 149 cgcagcagcagcggcggcgg 168
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>dbj|D82344.1| Homo sapiens mRNA for NBPhox, complete cds
          Length = 3029

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   cgcagcagcagcggcggcgg 36
            ||||||||||||||||||||
Sbjct: 1080 cgcagcagcagcggcggcgg 1099
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>dbj|AB015671.1| Homo sapiens NBPhox gene, complete cds
          Length = 5508

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   cgcagcagcagcggcggcgg 36
            ||||||||||||||||||||
Sbjct: 3466 cgcagcagcagcggcggcgg 3485
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>dbj|AB070943.1| Streptomyces avermitilis polyketide-3 biosynthetic gene cluster
          Length = 16832

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   cgtcggccgcccgcacggcc 69
            ||||||||||||||||||||
Sbjct: 9129 cgtcggccgcccgcacggcc 9110


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,007,092
Number of Sequences: 3902068
Number of extensions: 3007092
Number of successful extensions: 80597
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 77597
Number of HSP's gapped (non-prelim): 3002
length of query: 381
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 359
effective length of database: 17,147,199,772
effective search space: 6155844718148
effective search space used: 6155844718148
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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