ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl05h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
2dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
3dbj|AK072600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
4ref|NM_191124.1| Oryza sativa (japonica cultivar-group), predic... 80 6e-12
5gb|DQ124694.1| Aeromonas hydrophila FliML (fliML), FliNL (fliNL)... 46 0.085
6gb|AY458120.1| Mycobacterium smegmatis strain ATCC 19420 superox... 44 0.34
7gb|AY458107.1| Mycobacterium goodii strain ATCC 700504 superoxid... 44 0.34
8emb|Z48214.1|MSMMNSODG Msmegmatis partial Mn-SOD gene 44 0.34
9gb|AF061031.2|AF061031 Mycobacterium smegmatis superoxide dismut... 44 0.34
10gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.34
11gb|AY544865.1| Mycobacterium smegmatis strain CIP 104444 superox... 44 0.34
12gb|AY544826.1| Mycobacterium goodii strain CIP 106349 superoxide... 44 0.34
13gb|DQ225272.1| Homo sapiens ring finger and KH domain containing... 42 1.3
14gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 42 1.3
15gb|AY596617.1| Saccharum officinarum clone SCCCLR1024G10, comple... 42 1.3
16emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 42 1.3
17gb|AE005129.1| Halobacterium sp. NRC-1 section 160 of 170 of the... 42 1.3
18gb|AC005943.1|AC005943 Homo sapiens chromosome 19, cosmid R30538... 42 1.3
19gb|DQ215529.1| Taeniopygia guttata clone 0061P0019C12 RIKEN cDNA... 40 5.3
20gb|DQ215528.1| Taeniopygia guttata clone 0058P0032A06 RIKEN cDNA... 40 5.3
21ref|XM_473536.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
22gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.3
23gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.3
24gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
25gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 5.3
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.3
27ref|NM_024513.1| Homo sapiens FYVE and coiled-coil domain contai... 40 5.3
28gb|AF407707.1| Uncultured bacterium clone G55 16S ribosomal RNA ... 40 5.3
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.3
30gb|AY463246.1| Bacillus schlegelii carbon monoxide dehydrogenase... 40 5.3
31emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.3
32emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.3
33emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.3
34emb|AL832358.1|HSM803666 Homo sapiens mRNA; cDNA DKFZp451I106 (f... 40 5.3
35emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
36emb|AL353786.16| Human DNA sequence from clone RP5-1175B15 on ch... 40 5.3
37emb|AJ292348.2|HSA292348 Homo sapiens mRNA for FYVE and coiled-c... 40 5.3
38emb|CR450804.7| Zebrafish DNA sequence from clone CH211-275D22 i... 40 5.3
39tpg|BK000863.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M261,... 40 5.3
40gb|AC099782.2| Homo sapiens chromosome 3 clone RP11-852E15, comp... 40 5.3
41dbj|AB201308.1| uncultured crenarchaeote 45-H-12 genomic DNA, Fo... 40 5.3
42gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.3
43ref|XM_689081.1| PREDICTED: Danio rerio similar to FCH domain on... 40 5.3
44dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
45dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
46dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
47dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
48dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
50gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
51dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
52dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
53dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
54dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.3
55gb|AE005089.1| Halobacterium sp. NRC-1 section 120 of 170 of the... 40 5.3
56dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
57dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
58dbj|AK121937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
59dbj|AK069314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
60dbj|AK060659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
61emb|AL162171.4|CNS01RHP Human chromosome 14 DNA sequence BAC R-5... 40 5.3
62gb|AC006443.1|AC006443 Homo sapiens chromosome 9, clone hRPK.49... 40 5.3
63dbj|AB107353.1| Homo sapiens mRNA for KIAA2031 protein 40 5.3
64gb|BC088848.1| Rattus norvegicus similar to hypothetical protein... 40 5.3
65gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.3
66gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.3
67ref|NM_001014075.1| Rattus norvegicus similar to hypothetical pr... 40 5.3
68emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
69gb|BC101468.1| Homo sapiens FYVE and coiled-coil domain containi... 40 5.3
70gb|BC101470.1| Homo sapiens FYVE and coiled-coil domain containi... 40 5.3
71dbj|AB028129.1| Oryza sativa mRNA for Dof zinc finger protein, c... 40 5.3
72emb|AL591762.13| Mouse DNA sequence from clone RP23-465I6 on chr... 40 5.3 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                            
Query: 156      gagatggctgccatggttggagcgcgcagggccctcctcgccgcccgctactcccctcgc 215
                |||||||| |||||||||||||| |||||||||||||| || ||||| ||||| ||||||
Sbjct: 30772801 gagatggccgccatggttggagcacgcagggccctcctagctgcccgttactcgcctcgc 30772860

                           
Query: 216      ggcgagctcgc 226
                |||| ||||||
Sbjct: 30772861 ggcgcgctcgc 30772871



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                            
Query: 269      cagtcttccagctgaaagaggatgcccgcgttttttggttccacgtcgaggcgctggcag 328
                ||||||||||||||| ||||| || | | |   ||||||||||| |||||||||||||| 
Sbjct: 30773383 cagtcttccagctgacagaggttgtctgtggcctttggttccacatcgaggcgctggcaa 30773442

                                                             
Query: 329      tctggcatccgagcaaattgatggagactatcaccgtgattgggg 373
                | | ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 30773443 tttcgcatcagaacagatcgatggggactatcaccgcgaatgggg 30773487
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>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                         
Query: 156   gagatggctgccatggttggagcgcgcagggccctcctcgccgcccgctactcccctcgc 215
             |||||||| |||||||||||||| |||||||||||||| || ||||| ||||| ||||||
Sbjct: 62076 gagatggccgccatggttggagcacgcagggccctcctagctgcccgttactcgcctcgc 62135

                        
Query: 216   ggcgagctcgc 226
             |||| ||||||
Sbjct: 62136 ggcgcgctcgc 62146



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                         
Query: 269   cagtcttccagctgaaagaggatgcccgcgttttttggttccacgtcgaggcgctggcag 328
             ||||||||||||||| ||||| || | | |   ||||||||||| |||||||||||||| 
Sbjct: 62658 cagtcttccagctgacagaggttgtctgtggcctttggttccacatcgaggcgctggcaa 62717

                                                          
Query: 329   tctggcatccgagcaaattgatggagactatcaccgtgattgggg 373
             | | ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 62718 tttcgcatcagaacagatcgatggggactatcaccgcgaatgggg 62762
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>dbj|AK072600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130A18, full
           insert sequence
          Length = 2854

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 156 gagatggctgccatggttggagcgcgcagggccctcctcgccgcccgctactcccctcgc 215
           |||||||| |||||||||||||| |||||||||||||| || ||||| ||||| ||||||
Sbjct: 152 gagatggccgccatggttggagcacgcagggccctcctagctgcccgttactcgcctcgc 211

                      
Query: 216 ggcgagctcgc 226
           |||| ||||||
Sbjct: 212 ggcgcgctcgc 222



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                       
Query: 243 cccgcccggcgcgtcgattcgccgcacagtcttccagctgaaagaggatgcccgcgtttt 302
           |||| ||| ||||| |||||||||| ||||||||||||||| ||||| || | | |   |
Sbjct: 227 cccgtccgtcgcgtggattcgccgcccagtcttccagctgacagaggttgtctgtggcct 286

                                                                       
Query: 303 ttggttccacgtcgaggcgctggcagtctggcatccgagcaaattgatggagactatcac 362
           |||||||||| |||||||||||||| | | ||||| || || || ||||| |||||||||
Sbjct: 287 ttggttccacatcgaggcgctggcaatttcgcatcagaacagatcgatggggactatcac 346

                      
Query: 363 cgtgattgggg 373
           || || |||||
Sbjct: 347 cgcgaatgggg 357
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>ref|NM_191124.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2391

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 159 atggctgccatggttggagcgcgcagggccctcctcgccgcccgctactcccctcgcggc 218
           ||||| |||||||||||||| |||||||||||||| || ||||| ||||| |||||||||
Sbjct: 1   atggccgccatggttggagcacgcagggccctcctagctgcccgttactcgcctcgcggc 60

                   
Query: 219 gagctcgc 226
           | ||||||
Sbjct: 61  gcgctcgc 68



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                       
Query: 243 cccgcccggcgcgtcgattcgccgcacagtcttccagctgaaagaggatgcccgcgtttt 302
           |||| ||| ||||| |||||||||| ||||||||||||||| ||||| || | | |   |
Sbjct: 73  cccgtccgtcgcgtggattcgccgcccagtcttccagctgacagaggttgtctgtggcct 132

                                                                       
Query: 303 ttggttccacgtcgaggcgctggcagtctggcatccgagcaaattgatggagactatcac 362
           |||||||||| |||||||||||||| | | ||||| || || || ||||| |||||||||
Sbjct: 133 ttggttccacatcgaggcgctggcaatttcgcatcagaacagatcgatggggactatcac 192

                      
Query: 363 cgtgattgggg 373
           || || |||||
Sbjct: 193 cgcgaatgggg 203
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>gb|DQ124694.1| Aeromonas hydrophila FliML (fliML), FliNL (fliNL), FliPL (fliPL), FliQL
             (fliQL), FliRL (fliRL), FlhBL (flhBL), FlhAL (flhAL), LafK
             (lafK), FliEL (fliEL), FliFL (fliFL), FliGL (fliGL), FliHL
             (fliHL), FliIL (fliIL), FliJL (fliJL), FlgNL (flgNL),
             FlgML (flgML), FlgAL (flgAL), FlgBL (flgBL), FlgCL
             (flgCL), FlgDL (flgDL), FlgEL (flgEL), FlgFL (flgFL),
             FlgGL (flgGL), FlgHL (flgHL), FlgIL (flgIL), FlgJL
             (flgJL), FlgKL (flgKL), FlgLL (flgLL), Maf-5 (maf-5),
             lateral flagellin (lafA), flagellar hook associated
             protein 2 (lafB), LafC (lafC), LafX (lafX), flagellar hook
             control length protein (lafE), LafF (lafF), RNA polymerase
             sigma factor (lafS), LafT (lafT), and LafU (lafU) genes,
             complete cds
          Length = 35945

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 276   ccagctgaaagaggatgcccgcg 298
             |||||||||||||||||||||||
Sbjct: 16225 ccagctgaaagaggatgcccgcg 16203
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>gb|AY458120.1| Mycobacterium smegmatis strain ATCC 19420 superoxide dismutase
           (sodA) gene, partial cds
          Length = 501

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 215 cggcgagctcgcggccgcgatc 236
           ||||||||||||||||||||||
Sbjct: 270 cggcgagctcgcggccgcgatc 291
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>gb|AY458107.1| Mycobacterium goodii strain ATCC 700504 superoxide dismutase (sodA)
           gene, partial cds
          Length = 441

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 215 cggcgagctcgcggccgcgatc 236
           ||||||||||||||||||||||
Sbjct: 210 cggcgagctcgcggccgcgatc 231
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>emb|Z48214.1|MSMMNSODG Msmegmatis partial Mn-SOD gene
          Length = 413

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 215 cggcgagctcgcggccgcgatc 236
           ||||||||||||||||||||||
Sbjct: 195 cggcgagctcgcggccgcgatc 216
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>gb|AF061031.2|AF061031 Mycobacterium smegmatis superoxide dismutase (sodA) gene, complete
           cds; and unknown gene
          Length = 1071

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 215 cggcgagctcgcggccgcgatc 236
           ||||||||||||||||||||||
Sbjct: 557 cggcgagctcgcggccgcgatc 578
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 21      cgcgccgccgccccggccgtcgcacc 46
               ||||||||||||||||| ||||||||
Sbjct: 2443622 cgcgccgccgccccggcggtcgcacc 2443647



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     gcggcgagctcgcggccgcg 233
               ||||||||||||||||||||
Sbjct: 1181443 gcggcgagctcgcggccgcg 1181462
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>gb|AY544865.1| Mycobacterium smegmatis strain CIP 104444 superoxide dismutase
           (sod) gene, partial cds
          Length = 442

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 215 cggcgagctcgcggccgcgatc 236
           ||||||||||||||||||||||
Sbjct: 200 cggcgagctcgcggccgcgatc 221
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>gb|AY544826.1| Mycobacterium goodii strain CIP 106349 superoxide dismutase (sod)
           gene, partial cds
          Length = 442

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 215 cggcgagctcgcggccgcgatc 236
           ||||||||||||||||||||||
Sbjct: 200 cggcgagctcgcggccgcgatc 221
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>gb|DQ225272.1| Homo sapiens ring finger and KH domain containing 1 protein
          variant 1 (RKHD1) mRNA, partial cds
          Length = 497

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 cgccgccgccccggccgtcgc 43
          |||||||||||||||||||||
Sbjct: 77 cgccgccgccccggccgtcgc 97
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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 110    cgccgcgcacggagcagcaggggca 134
              |||||||||||||||||||| ||||
Sbjct: 265403 cgccgcgcacggagcagcagcggca 265379
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>gb|AY596617.1| Saccharum officinarum clone SCCCLR1024G10, complete sequence
          Length = 2031

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  ccgcgccgccgccccggccgt 40
           |||||||||||||||||||||
Sbjct: 409 ccgcgccgccgccccggccgt 429
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     gcgccgccgccccggccgtcg 42
              |||||||||||||||||||||
Sbjct: 248718 gcgccgccgccccggccgtcg 248738
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>gb|AE005129.1| Halobacterium sp. NRC-1 section 160 of 170 of the complete genome
          Length = 18209

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 223   tcgcggccgcgatcctctccc 243
             |||||||||||||||||||||
Sbjct: 10624 tcgcggccgcgatcctctccc 10644
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>gb|AC005943.1|AC005943 Homo sapiens chromosome 19, cosmid R30538, complete sequence
          Length = 42301

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 23   cgccgccgccccggccgtcgc 43
            |||||||||||||||||||||
Sbjct: 8282 cgccgccgccccggccgtcgc 8262
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>gb|DQ215529.1| Taeniopygia guttata clone 0061P0019C12 RIKEN cDNA 2210402C18
          variant 2-like mRNA, complete sequence
          Length = 931

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 20 ccgcgccgccgccccggccgtcgc 43
          ||||||||||||||||||| ||||
Sbjct: 92 ccgcgccgccgccccggccatcgc 69
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>gb|DQ215528.1| Taeniopygia guttata clone 0058P0032A06 RIKEN cDNA 2210402C18
           variant 1-like mRNA, complete sequence
          Length = 1505

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 20  ccgcgccgccgccccggccgtcgc 43
           ||||||||||||||||||| ||||
Sbjct: 147 ccgcgccgccgccccggccatcgc 124
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>ref|XM_473536.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cgcgccgccgccccggccgt 40
           ||||||||||||||||||||
Sbjct: 621 cgcgccgccgccccggccgt 602
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 20      ccgcgccgccgccccggccg 39
               ||||||||||||||||||||
Sbjct: 3354542 ccgcgccgccgccccggccg 3354561



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 20      ccgcgccgccgccccggccgtcgc 43
               ||||||||||| ||||||||||||
Sbjct: 2558577 ccgcgccgccggcccggccgtcgc 2558554
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 24      gccgccgccccggccgtcgcacca 47
               |||| |||||||||||||||||||
Sbjct: 3588112 gccgtcgccccggccgtcgcacca 3588089
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>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0074P11, complete sequence
          Length = 148753

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 20    ccgcgccgccgccccggccgtcgc 43
             |||||||||||| |||||||||||
Sbjct: 97935 ccgcgccgccgcgccggccgtcgc 97958
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 216     ggcgagctcgcggccgcgat 235
               ||||||||||||||||||||
Sbjct: 1659245 ggcgagctcgcggccgcgat 1659264
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 20      ccgcgccgccgccccggccgtcgc 43
               ||||||||||| ||||||||||||
Sbjct: 3770849 ccgcgccgccggcccggccgtcgc 3770826



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ccgcgccgccgccccggccg 39
              ||||||||||||||||||||
Sbjct: 393582 ccgcgccgccgccccggccg 393601
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>ref|NM_024513.1| Homo sapiens FYVE and coiled-coil domain containing 1 (FYCO1), mRNA
          Length = 8500

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  cagctgaaagaggatgcccg 296
            ||||||||||||||||||||
Sbjct: 1505 cagctgaaagaggatgcccg 1524
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>gb|AF407707.1| Uncultured bacterium clone G55 16S ribosomal RNA gene, partial
           sequence
          Length = 1564

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  ggggctcttcgccccccgcg 101
           ||||||||||||||||||||
Sbjct: 484 ggggctcttcgccccccgcg 465
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      gcgccgccgccccggccgtc 41
               ||||||||||||||||||||
Sbjct: 4462768 gcgccgccgccccggccgtc 4462749



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      gcgccgccgccccggccgtc 41
               ||||||||||||||||||||
Sbjct: 4457666 gcgccgccgccccggccgtc 4457647
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>gb|AY463246.1| Bacillus schlegelii carbon monoxide dehydrogenase form I large
           subunit (coxL) gene, partial cds
          Length = 1189

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  cgccgccgccccggccgtcg 42
           ||||||||||||||||||||
Sbjct: 876 cgccgccgccccggccgtcg 857
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>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13
          Length = 349563

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     gccgccgccccggccgtcgcacca 47
              |||| |||||||||||||||||||
Sbjct: 125544 gccgtcgccccggccgtcgcacca 125521
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 20      ccgcgccgccgccccggccgtcgc 43
               ||||||||||| ||||||||||||
Sbjct: 3511169 ccgcgccgccggcccggccgtcgc 3511146



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ccgcgccgccgccccggccg 39
              ||||||||||||||||||||
Sbjct: 203306 ccgcgccgccgccccggccg 203325
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>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14
          Length = 308050

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     gccgccgccccggccgtcgcacca 47
              |||| |||||||||||||||||||
Sbjct: 104750 gccgtcgccccggccgtcgcacca 104727
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>emb|AL832358.1|HSM803666 Homo sapiens mRNA; cDNA DKFZp451I106 (from clone DKFZp451I106)
          Length = 4745

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  cagctgaaagaggatgcccg 296
            ||||||||||||||||||||
Sbjct: 1509 cagctgaaagaggatgcccg 1528
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>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02,
              complete sequence
          Length = 175163

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     cgcgccgccgccccggccgt 40
              ||||||||||||||||||||
Sbjct: 157660 cgcgccgccgccccggccgt 157679
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>emb|AL353786.16| Human DNA sequence from clone RP5-1175B15 on chromosome X Contains the
              gene for a protein similar to rat fertility related protein
              WMP1, the 3' end of the PTPN21 gene for protein tyrosine
              phosphatase non-receptor type 21 and CpG islands, complete
              sequence
          Length = 139565

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     gcttggcggctggggctctt 90
              ||||||||||||||||||||
Sbjct: 134582 gcttggcggctggggctctt 134563
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>emb|AJ292348.2|HSA292348 Homo sapiens mRNA for FYVE and coiled-coil domain containing 1 (FYCO1
            gene)
          Length = 8500

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  cagctgaaagaggatgcccg 296
            ||||||||||||||||||||
Sbjct: 1505 cagctgaaagaggatgcccg 1524
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>emb|CR450804.7| Zebrafish DNA sequence from clone CH211-275D22 in linkage group 8,
             complete sequence
          Length = 91038

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   gtgattggggggtgcaaaac 383
             ||||||||||||||||||||
Sbjct: 53163 gtgattggggggtgcaaaac 53144
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>tpg|BK000863.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M261, complete sequence
          Length = 6209

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 18   caccgcgccgccgccccggccgtcgcac 45
            |||||||||||| | |||||||||||||
Sbjct: 4396 caccgcgccgccacgccggccgtcgcac 4423
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>gb|AC099782.2| Homo sapiens chromosome 3 clone RP11-852E15, complete sequence
          Length = 209772

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    cagctgaaagaggatgcccg 296
              ||||||||||||||||||||
Sbjct: 153953 cagctgaaagaggatgcccg 153934
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>dbj|AB201308.1| uncultured crenarchaeote 45-H-12 genomic DNA, Fosmid clone No.45-H-12
          Length = 49265

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   tgagaggttgagggagatgg 162
             ||||||||||||||||||||
Sbjct: 34893 tgagaggttgagggagatgg 34874
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     gagctcgcggccgcgatcct 238
               ||||||||||||||||||||
Sbjct: 5184089 gagctcgcggccgcgatcct 5184070
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>ref|XM_689081.1| PREDICTED: Danio rerio similar to FCH domain only 1 (LOC565812), mRNA
          Length = 3480

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 364  gtgattggggggtgcaaaac 383
            ||||||||||||||||||||
Sbjct: 2603 gtgattggggggtgcaaaac 2622
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 21       cgcgccgccgccccggccgt 40
                ||||||||||||||||||||
Sbjct: 28508985 cgcgccgccgccccggccgt 28509004



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 18       caccgcgccgccgccccggccgtcgcac 45
                |||||||||||| | |||||||||||||
Sbjct: 24426135 caccgcgccgccacgccggccgtcgcac 24426162
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 215      cggcgagctcgcggccgcga 234
                ||||||||||||||||||||
Sbjct: 10427992 cggcgagctcgcggccgcga 10428011
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 20       ccgcgccgccgccccggccg 39
                ||||||||||||||||||||
Sbjct: 22329491 ccgcgccgccgccccggccg 22329510
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 20       ccgcgccgccgccccggccg 39
                ||||||||||||||||||||
Sbjct: 16098132 ccgcgccgccgccccggccg 16098113
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 20      ccgcgccgccgccccggccgtcgc 43
               |||||||||||| |||||||||||
Sbjct: 6866981 ccgcgccgccgcgccggccgtcgc 6867004
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      gcgccgccgccccggccgtc 41
               ||||||||||||||||||||
Sbjct: 4462883 gcgccgccgccccggccgtc 4462864



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      gcgccgccgccccggccgtc 41
               ||||||||||||||||||||
Sbjct: 4457781 gcgccgccgccccggccgtc 4457762
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>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0042J17, complete sequence
          Length = 171442

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gcgccgccgccccggccgtc 41
             ||||||||||||||||||||
Sbjct: 68060 gcgccgccgccccggccgtc 68041



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gcgccgccgccccggccgtc 41
             ||||||||||||||||||||
Sbjct: 62958 gcgccgccgccccggccgtc 62939
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>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0038F09
          Length = 166568

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ccgcgccgccgccccggccg 39
             ||||||||||||||||||||
Sbjct: 68465 ccgcgccgccgccccggccg 68446
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>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1104_G11
          Length = 140093

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    cggcgagctcgcggccgcga 234
              ||||||||||||||||||||
Sbjct: 135697 cggcgagctcgcggccgcga 135716
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>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0448B03
          Length = 147748

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   cggcgagctcgcggccgcga 234
             ||||||||||||||||||||
Sbjct: 28371 cggcgagctcgcggccgcga 28390
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 20     ccgcgccgccgccccggccgtcgc 43
              |||||||||||||| |||||||||
Sbjct: 127789 ccgcgccgccgcccgggccgtcgc 127766
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>gb|AE005089.1| Halobacterium sp. NRC-1 section 120 of 170 of the complete genome
          Length = 11224

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  cagcaggggcacgccgcgct 143
            ||||||||||||||||||||
Sbjct: 5786 cagcaggggcacgccgcgct 5805
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>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    ccgcgccgccgccccggccg 39
             ||||||||||||||||||||
Sbjct: 26474 ccgcgccgccgccccggccg 26493
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>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0048G02
          Length = 155542

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ccgcgccgccgccccggccg 39
              ||||||||||||||||||||
Sbjct: 145867 ccgcgccgccgccccggccg 145886
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>dbj|AK121937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107C12, full
           insert sequence
          Length = 1505

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  gcgccgccgccccggccgtc 41
           ||||||||||||||||||||
Sbjct: 153 gcgccgccgccccggccgtc 172
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>dbj|AK069314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011A15, full
           insert sequence
          Length = 2282

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  gcgccgccgccccggccgtc 41
           ||||||||||||||||||||
Sbjct: 136 gcgccgccgccccggccgtc 155
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>dbj|AK060659.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A11, full
           insert sequence
          Length = 1556

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cgcgccgccgccccggccgt 40
           ||||||||||||||||||||
Sbjct: 758 cgcgccgccgccccggccgt 739
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>emb|AL162171.4|CNS01RHP Human chromosome 14 DNA sequence BAC R-507K2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197550

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     gcttggcggctggggctctt 90
              ||||||||||||||||||||
Sbjct: 146513 gcttggcggctggggctctt 146532
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>gb|AC006443.1|AC006443 Homo sapiens chromosome 9, clone  hRPK.494_N_15, complete sequence
          Length = 210636

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ccgcgccgccgccccggccg 39
              ||||||||||||||||||||
Sbjct: 183106 ccgcgccgccgccccggccg 183125
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>dbj|AB107353.1| Homo sapiens mRNA for KIAA2031 protein
          Length = 2441

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 gccgccgccccggccgtcgc 43
          ||||||||||||||||||||
Sbjct: 1  gccgccgccccggccgtcgc 20
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>gb|BC088848.1| Rattus norvegicus similar to hypothetical protein FLJ21820, mRNA
           (cDNA clone MGC:105595 IMAGE:7314294), complete cds
          Length = 2738

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 ggagatggctgccatggttg 174
           ||||||||||||||||||||
Sbjct: 979 ggagatggctgccatggttg 998
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 226     cggccgcgatcctctcccccgccc 249
               |||||||||||| |||||||||||
Sbjct: 1382857 cggccgcgatccgctcccccgccc 1382834



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    cgcggcgagctcgcggccgc 232
              ||||||||||||||||||||
Sbjct: 926317 cgcggcgagctcgcggccgc 926336
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ccgcgccgccgccccggccg 39
              ||||||||||||||||||||
Sbjct: 187792 ccgcgccgccgccccggccg 187811
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>ref|NM_001014075.1| Rattus norvegicus similar to hypothetical protein FLJ21820
           (RGD1311648), mRNA
          Length = 2738

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 ggagatggctgccatggttg 174
           ||||||||||||||||||||
Sbjct: 979 ggagatggctgccatggttg 998
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>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20,
             complete sequence
          Length = 116983

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 18    caccgcgccgccgccccggccgtcgcac 45
             |||||||||||| | |||||||||||||
Sbjct: 19457 caccgcgccgccacgccggccgtcgcac 19484
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>gb|BC101468.1| Homo sapiens FYVE and coiled-coil domain containing 1, mRNA (cDNA
            clone MGC:126517 IMAGE:8068974), complete cds
          Length = 4575

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  cagctgaaagaggatgcccg 296
            ||||||||||||||||||||
Sbjct: 1391 cagctgaaagaggatgcccg 1410
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>gb|BC101470.1| Homo sapiens FYVE and coiled-coil domain containing 1, mRNA (cDNA
            clone MGC:126519 IMAGE:8068976), complete cds
          Length = 4575

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 277  cagctgaaagaggatgcccg 296
            ||||||||||||||||||||
Sbjct: 1391 cagctgaaagaggatgcccg 1410
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>dbj|AB028129.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds
          Length = 2316

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cgcgccgccgccccggccgt 40
           ||||||||||||||||||||
Sbjct: 895 cgcgccgccgccccggccgt 876
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>emb|AL591762.13| Mouse DNA sequence from clone RP23-465I6 on chromosome 2, complete
             sequence
          Length = 137773

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ccgcgccgccgccccggccg 39
             ||||||||||||||||||||
Sbjct: 40694 ccgcgccgccgccccggccg 40675


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,773,118
Number of Sequences: 3902068
Number of extensions: 2773118
Number of successful extensions: 63072
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60846
Number of HSP's gapped (non-prelim): 2226
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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