Clone Name | bastl05h06 |
---|---|
Clone Library Name | barley_pub |
>ATY1_ARATH (Q9LT02) Putative cation-transporting ATPase (EC 3.6.3.-)| Length = 1179 Score = 73.6 bits (179), Expect = 1e-13 Identities = 37/76 (48%), Positives = 43/76 (56%) Frame = +2 Query: 158 MARFEVNGKSVEGVDLLRRRHWTARLDFWPFXXXXXXXXXXXXXXXDFTDALVILGVLSA 337 M+ F V GK VE VDL R++ RLD WPF DF+DA + LG LSA Sbjct: 1 MSSFRVGGKVVEKVDLCRKKQLVWRLDVWPFAILYTVWLTTIVPSIDFSDACIALGGLSA 60 Query: 338 SHILAFLFTAWSVDFR 385 HIL LFT WSVDF+ Sbjct: 61 FHILVLLFTTWSVDFK 76
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 156 PAPRPPGSEGRPARSRRDR 100 P+P PPGSE P+ S+R R Sbjct: 681 PSPPPPGSEAAPSPSKRKR 699
>RMT2_ASPFU (Q4X1R1) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 424 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = -2 Query: 214 PPQQVHPLHRLAVHLEPRHAGATTARIGGETSSVST 107 P PLH EP A T + GETSS ST Sbjct: 50 PETGFSPLHAAIAACEPDEAQTETNGVNGETSSAST 85
>JPH4_MOUSE (Q80WT0) Junctophilin-4 (Junctophilin-like 1 protein)| Length = 628 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = +1 Query: 43 EKPSRVGRPHGHRRTPAA-DPIPSRPSWSPLRSGRSWRRHGAVRGER 180 E PS H R PA P+P +W P S ++W GE+ Sbjct: 459 ELPSSPASSHQPWRAPACRSPLPPGGNWGPFSSPKAWPEEWGGPGEQ 505
>SOX7_HUMAN (Q9BT81) Transcription factor SOX-7| Length = 388 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -3 Query: 195 PSTDLPFTSNRAMPA-PRPPGSEGRPARSRR 106 P+ D + ++ PA PRPPG +G +R RR Sbjct: 17 PALDAELSDGQSPPAVPRPPGDKGSESRIRR 47
>ATX1_HUMAN (P54253) Ataxin-1 (Spinocerebellar ataxia type 1 protein)| Length = 816 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +2 Query: 119 AGLPSDPGGRGAGMARFEVNGKSVE 193 A LP +PGGRG G R G SVE Sbjct: 44 AWLPGNPGGRGHGGGRHGPAGTSVE 68
>SYC_RHOPA (Q6N8A7) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 463 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +1 Query: 46 KPSRVGRPHGHRRTPAADPIPSRPSWSPLRSGRSWRRHG 162 KPS+ G P +PA P RP W S SW+ G Sbjct: 200 KPSKPGEPSWP--SPAGIATPGRPGWHIECSAMSWKHLG 236
>PPK_PSESM (Q87UP6) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid| kinase) (ATP-polyphosphate phosphotransferase) Length = 736 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 197 VDLLRRRHWTARLDFW 244 V +RRRHWTA+L W Sbjct: 156 VRFIRRRHWTAKLKAW 171
>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 382 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = +2 Query: 128 PSDPGGRGAGMARFEVNGKSVEGVDLLRRRHWTAR 232 P DPGG AG+ F+ +V+GV++ ++++ + R Sbjct: 131 PQDPGGLPAGIHSFD----AVQGVEVYKKKYMSKR 161
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 198 TPSTDLPFTSNRAMPAPRPPGSEGRPA 118 TP+ ++PF S+ P P PG+ +PA Sbjct: 922 TPTFNIPFGSSAKSPLPSYPGANPQPA 948
>IF2_SYMTH (Q67P86) Translation initiation factor IF-2| Length = 1044 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -3 Query: 195 PSTDLPFTSNRAMPAPRPPGSEGRPARS 112 P + P TS + P P PG RPA S Sbjct: 281 PQAEAPQTSGPSRPVPAGPGQPARPAGS 308
>VAX2_HUMAN (Q9UIW0) Ventral anterior homeobox 2| Length = 290 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +1 Query: 49 PSRVGRPHGHRRTPAADPIPSRPSWSPLRS 138 PS G P HR T DP S P +PL S Sbjct: 205 PSLPGLPASHRGTSLGDPRNSSPRLNPLSS 234
>CD45_MOUSE (P06800) Leukocyte common antigen precursor (EC 3.1.3.48) (L-CA)| (Lymphocyte common antigen Ly-5) (CD45 antigen) (T200) Length = 1291 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +1 Query: 79 RRTPAADPIPSRPSWSPLRSGRSWR-RHGAVRGERQ 183 +R P +DP P + L S RSWR +H +GE + Sbjct: 921 KRDPPSDPSPREAEYQRLPSYRSWRTQHIGNQGENK 956
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -3 Query: 195 PSTDLPFTSNRAMPAPRPPGSEGRP 121 PST P S++A P P PP G P Sbjct: 295 PSTPRPSASSQAPPPPPPPSRPGPP 319
>CO9A2_CHICK (P12108) Collagen alpha-2(IX) chain precursor| Length = 677 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 110 RDRAGLPSDPGGRGAGMARFEVNGKSVEGV 199 R +AGLP PG +G + EV + +G+ Sbjct: 331 RGQAGLPGQPGSKGGPGDKGEVGARGQQGI 360
>CID_DROME (P19538) Protein cubitus interruptus| Length = 1397 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = -3 Query: 192 STDLPFT--SNRAMPAPRPPGSEGRPARSRR 106 STD F+ NR + +PRPPG R + SR+ Sbjct: 184 STDFHFSVDGNRRLGSPRPPGGSIRASISRK 214
>FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34-like)| Length = 646 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 7/32 (21%) Frame = +2 Query: 101 RSRRDRAG-------LPSDPGGRGAGMARFEV 175 RS R R G LPS PG RG+G+ R + Sbjct: 603 RSTRGRGGESPPRPPLPSPPGSRGSGLGRLPI 634 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,825,488 Number of Sequences: 219361 Number of extensions: 526004 Number of successful extensions: 2689 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2436 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2686 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)