ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl05g07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 809 bits (408), Expect = 0.0 Identities = 466/480 (97%), Gaps = 4/480 (0%) Strand = Plus / Plus Query: 1 acacagcagcaccacagcgagctaacttagcaagcgtgccacactccccagagatcgagc 60 |||||||| |||| |||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 4 acacagca-caccgcagcgagctaacttag-aagcgtgccacactccc-agagatcgagc 60 Query: 61 gaagatgtttggcgtcggcggcatcgtgagcgacctgacggggggcctccggggcgccca 120 |||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 61 -aagatgcttggcgtcggcggcatcgtgagcgacttgacggggggcatccggggcgccca 119 Query: 121 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 120 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 179 Query: 181 caccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcag 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 180 ccacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcag 239 Query: 241 ctccaccaacgtcgaccacaacaacggagggcgcgggaaggtgggcgcggaggcgaacct 300 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 240 ctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacct 299 Query: 301 ggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgc 359 Query: 361 cgtcaccttcgactggtcggtggacaagctgggggtgccgggcgccatcatcgtcaagaa 420 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 360 cgtcaccttcgactggtcggtggacaagctgggggtgccgggggccatcatcgtcaagaa 419 Query: 421 caaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcgg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 caaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcgg 479
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 262 bits (132), Expect = 9e-67 Identities = 302/359 (84%), Gaps = 6/359 (1%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| |||||||| |||||||| Sbjct: 52 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 111 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 |||||| | ||| || ||| |||| |||||||| || ||||||||||||||| ||||| Sbjct: 112 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 171 Query: 242 tccaccaacgtcgaccacaacaacggagggcgcgggaaggtgggcgcggaggcgaacctg 301 |||||| ||||||| ||||||||| |||||| ||| || ||||||||||||||| Sbjct: 172 tccaccctcgtcgacgccaacaacggcaaccgcgggcgggtcggggcggaggcgaacctg 231 Query: 302 gagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgcc 361 ||||||||||| ||||| |||||||| | || ||||||||| |||||||| | Sbjct: 232 gagcagtggct------gacgagcctgccgtcgctgacgaccggcgagtccaagttcggc 285 Query: 362 gtcaccttcgactggtcggtggacaagctgggggtgccgggcgccatcatcgtcaagaac 421 ||||| ||||||||| |||||| |||||||| |||||||| ||| || ||||||||||| Sbjct: 286 gtcacgttcgactgggaggtggagaagctgggagtgccgggggccgtcgtcgtcaagaac 345 Query: 422 aaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcgg 480 ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 346 aaccacgccgccgagttcttcctcaagacaatcaccctcgacgacgtgcccggccgcgg 404
>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence Length = 515 Score = 262 bits (132), Expect = 9e-67 Identities = 302/359 (84%), Gaps = 6/359 (1%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| |||||||| |||||||| Sbjct: 114 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 173 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 |||||| | ||| || ||| |||| |||||||| || ||||||||||||||| ||||| Sbjct: 174 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 233 Query: 242 tccaccaacgtcgaccacaacaacggagggcgcgggaaggtgggcgcggaggcgaacctg 301 |||||| ||||||| ||||||||| |||||| ||| || ||||||||||||||| Sbjct: 234 tccaccctcgtcgacgccaacaacggcaaccgcgggcgggtcggggcggaggcgaacctg 293 Query: 302 gagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgcc 361 ||||||||||| ||||| |||||||| | || ||||||||| |||||||| | Sbjct: 294 gagcagtggct------gacgagcctgccgtcgctgacgaccggcgagtccaagttcggc 347 Query: 362 gtcaccttcgactggtcggtggacaagctgggggtgccgggcgccatcatcgtcaagaac 421 ||||| ||||||||| |||||| |||||||| |||||||| ||| || ||||||||||| Sbjct: 348 gtcacgttcgactgggaggtggagaagctgggagtgccgggggccgtcgtcgtcaagaac 407 Query: 422 aaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcccggccgcgg 480 ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 408 aaccacgccgccgagttcttcctcaagacaatcaccctcgacgacgtgcccggccgcgg 466
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 202 bits (102), Expect = 8e-49 Identities = 174/198 (87%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacct 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||| | Sbjct: 42 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 101 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 102 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 161 Query: 235 cgtcagctccaccaacgtcgaccacaacaacggagggcgcgggaaggtgggcgcggaggc 294 |||||||||| || |||||||| |||||| || | |||| |||||| ||||||| Sbjct: 162 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 221 Query: 295 gaacctggagcagtggct 312 || ||||||||||||||| Sbjct: 222 gagcctggagcagtggct 239 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 401 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 322 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 381 Query: 461 gacaacgtgcccggcc 476 |||||||| ||||||| Sbjct: 382 gacaacgtccccggcc 397
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 202 bits (102), Expect = 8e-49 Identities = 174/198 (87%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacct 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||| | Sbjct: 157 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 216 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 217 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 276 Query: 235 cgtcagctccaccaacgtcgaccacaacaacggagggcgcgggaaggtgggcgcggaggc 294 |||||||||| || |||||||| |||||| || | |||| |||||| ||||||| Sbjct: 277 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 336 Query: 295 gaacctggagcagtggct 312 || ||||||||||||||| Sbjct: 337 gagcctggagcagtggct 354 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 401 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 437 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 496 Query: 461 gacaacgtgcccggcc 476 |||||||| ||||||| Sbjct: 497 gacaacgtccccggcc 512
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacct 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||| | Sbjct: 30023301 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30023360 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 30023361 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30023420 Query: 235 cgtcagctccaccaacgtcgacc 257 |||||||||| || |||||||| Sbjct: 30023421 cgtcagctcctccctcgtcgacc 30023443 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 401 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 30023659 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 30023718 Query: 461 gacaacgtgcccggcc 476 |||||||| ||||||| Sbjct: 30023719 gacaacgtccccggcc 30023734 Score = 119 bits (60), Expect = 9e-24 Identities = 117/136 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| |||||||| |||||||| Sbjct: 27798757 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27798816 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 |||||||| |||||| || |||| |||||||| |||||||||||||||||| ||||| Sbjct: 27798817 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 27798876 Query: 242 tccaccaacgtcgacc 257 |||||| |||||||| Sbjct: 27798877 tccaccgccgtcgacc 27798892 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 383 gacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttc 442 |||||||| || |||||||| |||||||||||||||||| ||||| | |||||||||| Sbjct: 27799413 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 27799472 Query: 443 ctcaagaccatcaccctcgacaacgtgcccggccgcg 479 ||||||||||||||||||||| |||| |||||||||| Sbjct: 27799473 ctcaagaccatcaccctcgacgacgtccccggccgcg 27799509 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 381 tggacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 440 ||||||||| || ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 27758793 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 27758852 Query: 441 tcctcaagaccatcaccctc 460 |||||||||||||||||||| Sbjct: 27758853 tcctcaagaccatcaccctc 27758872 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 275 gggaaggtgggcgcggaggcgaacctggagcagtggct 312 ||||||||||| |||||||||| ||||||||||||||| Sbjct: 27799308 gggaaggtgggggcggaggcgagcctggagcagtggct 27799345 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 431 tccgagttcttcctcaagaccatcaccctcgac 463 |||||||||||||||||||| ||||||||||| Sbjct: 27816818 tccgagttcttcctcaagacgctcaccctcgac 27816850 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 275 gggaaggtgggcgcggaggcgaacctggagcagtggct 312 |||| |||||| ||||||||| ||||||||||||||| Sbjct: 30023539 gggagggtggggacggaggcgagcctggagcagtggct 30023576 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 24817033 ggcgtcggcggcatcgtgag 24817052
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Minus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacct 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||| | Sbjct: 84450 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 84391 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 84390 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 84331 Query: 235 cgtcagctccaccaacgtcgacc 257 |||||||||| || |||||||| Sbjct: 84330 cgtcagctcctccctcgtcgacc 84308 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Minus Query: 401 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 84092 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 84033 Query: 461 gacaacgtgcccggcc 476 |||||||| ||||||| Sbjct: 84032 gacaacgtccccggcc 84017 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Minus Query: 275 gggaaggtgggcgcggaggcgaacctggagcagtggct 312 |||| |||||| ||||||||| ||||||||||||||| Sbjct: 84212 gggagggtggggacggaggcgagcctggagcagtggct 84175
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacct 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||| | Sbjct: 30114723 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30114782 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234 ||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 30114783 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30114842 Query: 235 cgtcagctccaccaacgtcgacc 257 |||||||||| || |||||||| Sbjct: 30114843 cgtcagctcctccctcgtcgacc 30114865 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 401 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 30115081 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 30115140 Query: 461 gacaacgtgcccggcc 476 |||||||| ||||||| Sbjct: 30115141 gacaacgtccccggcc 30115156 Score = 119 bits (60), Expect = 9e-24 Identities = 117/136 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| |||||||| |||||||| Sbjct: 27890081 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27890140 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 |||||||| |||||| || |||| |||||||| |||||||||||||||||| ||||| Sbjct: 27890141 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 27890200 Query: 242 tccaccaacgtcgacc 257 |||||| |||||||| Sbjct: 27890201 tccaccgccgtcgacc 27890216 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 383 gacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttc 442 |||||||| || |||||||| |||||||||||||||||| ||||| | |||||||||| Sbjct: 27890737 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 27890796 Query: 443 ctcaagaccatcaccctcgacaacgtgcccggccgcg 479 ||||||||||||||||||||| |||| |||||||||| Sbjct: 27890797 ctcaagaccatcaccctcgacgacgtccccggccgcg 27890833 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 381 tggacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 440 ||||||||| || ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 27850116 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 27850175 Query: 441 tcctcaagaccatcaccctc 460 |||||||||||||||||||| Sbjct: 27850176 tcctcaagaccatcaccctc 27850195 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 275 gggaaggtgggcgcggaggcgaacctggagcagtggct 312 ||||||||||| |||||||||| ||||||||||||||| Sbjct: 27890632 gggaaggtgggggcggaggcgagcctggagcagtggct 27890669 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 431 tccgagttcttcctcaagaccatcaccctcgac 463 |||||||||||||||||||| ||||||||||| Sbjct: 27908142 tccgagttcttcctcaagacgctcaccctcgac 27908174 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 275 gggaaggtgggcgcggaggcgaacctggagcagtggct 312 |||| |||||| ||||||||| ||||||||||||||| Sbjct: 30114961 gggagggtggggacggaggcgagcctggagcagtggct 30114998 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 24908356 ggcgtcggcggcatcgtgag 24908375
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 186 bits (94), Expect = 4e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 115 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacct 174 ||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||| | Sbjct: 139 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 198 Query: 175 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 234 ||||||||||||||| || || || ||||| |||||||||||||||||||||||||||| Sbjct: 199 cggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacctgccagct 258 Query: 235 cgtcagctccaccaacgtcgaccacaacaacggagggcgcgggaaggtgggcgcggaggc 294 |||||||||| || |||||||| |||||| || | |||| |||||| ||||||| Sbjct: 259 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 318 Query: 295 gaacctggagcagtggct 312 || ||||||||||||||| Sbjct: 319 gagcctggagcagtggct 336 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 401 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 419 ggcgccatcatcgtcaagaacaaccacgccgccgagttcttcctcaagaccatcaccctc 478 Query: 461 gacaacgtgcccggcc 476 |||||||| ||||||| Sbjct: 479 gacaacgtccccggcc 494
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 180 bits (91), Expect = 3e-42 Identities = 168/194 (86%), Gaps = 6/194 (3%) Strand = Plus / Plus Query: 287 gcggaggcgaacctggagcagtggctcctgccgacgaacctgccgttcatcaccaccggc 346 |||||||||||||||||||||||||| ||||| |||||||| | || |||||| Sbjct: 945 gcggaggcgaacctggagcagtggct------gacgagcctgccgtcgctgacgaccggc 998 Query: 347 gagaacaagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccgggcgcc 406 ||| |||||||| |||||| ||||||||| |||||| |||||||| |||||||| ||| Sbjct: 999 gagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggggcc 1058 Query: 407 atcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaac 466 || |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || Sbjct: 1059 gtcgtcgtcaagaacaaccacgccgccgagttcttcctcaagacaatcaccctcgacgac 1118 Query: 467 gtgcccggccgcgg 480 |||||||||||||| Sbjct: 1119 gtgcccggccgcgg 1132 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| |||||||| |||||||| Sbjct: 200 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 259 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 |||||| | ||| || ||| |||| |||||||| || ||||||||||||||| ||||| Sbjct: 260 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 319 Query: 242 tccaccaacgtcgac 256 |||||| ||||||| Sbjct: 320 tccaccctcgtcgac 334
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 161 bits (81), Expect = 3e-36 Identities = 162/189 (85%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| |||||||| |||||||| Sbjct: 123 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 182 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 ||| |||| |||||| || |||| |||||||| ||||||||||||||||| ||||| Sbjct: 183 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 242 Query: 242 tccaccaacgtcgaccacaacaacggagggcgcgggaaggtgggcgcggaggcgaacctg 301 |||||| ||||||||| ||||||| || |||||||||||||||||||||||| | ||| Sbjct: 243 tccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctg 302 Query: 302 gagcagtgg 310 ||||||||| Sbjct: 303 gagcagtgg 311 Score = 109 bits (55), Expect = 8e-21 Identities = 109/127 (85%) Strand = Plus / Plus Query: 352 caagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccgggcgccatcat 411 |||||||| | |||||||||||||| |||||| ||||| |||||||||||||||||| | Sbjct: 347 caagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgt 406 Query: 412 cgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcc 471 |||||| ||| ||||| |||||||||| | || || |||||||||||| || |||| || Sbjct: 407 cgtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccc 466 Query: 472 cggccgc 478 ||||||| Sbjct: 467 cggccgc 473
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 159 bits (80), Expect = 1e-35 Identities = 119/132 (90%) Strand = Plus / Plus Query: 345 gcgagaacaagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccgggcg 404 |||||||| ||||| |||||||||||||||| |||||| |||| ||| | ||||||| Sbjct: 290 gcgagaaccagttccgcgtcaccttcgactgggaggtggagaagcagggcatcccgggcg 349 Query: 405 ccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgaca 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 350 ccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcaacg 409 Query: 465 acgtgcccggcc 476 |||| ||||||| Sbjct: 410 acgtccccggcc 421 Score = 117 bits (59), Expect = 3e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 202 cgagctcctcggccgcggcgtcacctgccagctcgtcagctccaccaacgtcgaccacaa 261 |||| |||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 153 cgagttcctcggccgcggcgtcacctgccagcttatcagctccaccgtcgtcgaccctaa 212 Query: 262 caacggagggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 312 |||||| ||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 213 caacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagtggct 263
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 157 bits (79), Expect = 4e-35 Identities = 163/191 (85%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| |||||||| |||||||| Sbjct: 52 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 111 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 |||||||| |||||| || |||| |||||||| |||||||||||||||||| ||||| Sbjct: 112 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 171 Query: 242 tccaccaacgtcgaccacaacaacggagggcgcgggaaggtgggcgcggaggcgaacctg 301 |||||| |||||||| |||||||| || ||||||||||| |||||||||| |||| Sbjct: 172 tccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagcctg 231 Query: 302 gagcagtggct 312 ||||||||||| Sbjct: 232 gagcagtggct 242 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 383 gacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttc 442 |||||||| || |||||||| |||||||||||||||||| ||||| | |||||||||| Sbjct: 310 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 369 Query: 443 ctcaagaccatcaccctcgacaacgtgcccggccgcg 479 ||||||||||||||||||||| |||| |||||||||| Sbjct: 370 ctcaagaccatcaccctcgacgacgtccccggccgcg 406
>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region and partial cds Length = 3196 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 342 ccggcgagaacaagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccgg 401 |||||||| || ||||| |||||||||||||||| |||||| |||| || || |||| Sbjct: 2808 ccggcgaggaccagttccgcgtcaccttcgactgggaggtggagaagcacggcgtcccgg 2867 Query: 402 gcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcg 461 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2868 gcgccatcatcgtgaagaacaaccacgcctccgagttcttcctcaagaccatcaccatcg 2927 Query: 462 acaacgtgcccggcc 476 || |||| ||||||| Sbjct: 2928 acgacgtccccggcc 2942 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 186 tcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagctcca 245 ||||||||||| || |||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446 Query: 246 ccaacgtcgacc 257 || |||||||| Sbjct: 2447 ccgtcgtcgacc 2458 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 272 cgcgggaaggtgggcgcggaggcgaacctggagcagtggctcctgc 317 |||||||||||||| |||||||| ||||||||||||||| |||| Sbjct: 2744 cgcgggaaggtgggtcaggaggcgagcctggagcagtggctgctgc 2789
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 119 bits (60), Expect = 9e-24 Identities = 117/136 (86%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| |||||||| |||||||| Sbjct: 42887 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 42946 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 |||||||| |||||| || |||| |||||||| |||||||||||||||||| ||||| Sbjct: 42947 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 43006 Query: 242 tccaccaacgtcgacc 257 |||||| |||||||| Sbjct: 43007 tccaccgccgtcgacc 43022 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 383 gacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttc 442 |||||||| || |||||||| |||||||||||||||||| ||||| | |||||||||| Sbjct: 43543 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 43602 Query: 443 ctcaagaccatcaccctcgacaacgtgcccggccgcg 479 ||||||||||||||||||||| |||| |||||||||| Sbjct: 43603 ctcaagaccatcaccctcgacgacgtccccggccgcg 43639 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 381 tggacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 440 ||||||||| || ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 2922 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 2981 Query: 441 tcctcaagaccatcaccctc 460 |||||||||||||||||||| Sbjct: 2982 tcctcaagaccatcaccctc 3001 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 275 gggaaggtgggcgcggaggcgaacctggagcagtggct 312 ||||||||||| |||||||||| ||||||||||||||| Sbjct: 43438 gggaaggtgggggcggaggcgagcctggagcagtggct 43475 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 431 tccgagttcttcctcaagaccatcaccctcgac 463 |||||||||||||||||||| ||||||||||| Sbjct: 60948 tccgagttcttcctcaagacgctcaccctcgac 60980
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 119 bits (60), Expect = 9e-24 Identities = 117/136 (86%) Strand = Plus / Minus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| |||||| |||||||| |||||||| Sbjct: 15136 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 15077 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 |||||||| |||||| || |||| |||||||| |||||||||||||||||| ||||| Sbjct: 15076 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 15017 Query: 242 tccaccaacgtcgacc 257 |||||| |||||||| Sbjct: 15016 tccaccgccgtcgacc 15001 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Minus Query: 383 gacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttcttc 442 |||||||| || |||||||| |||||||||||||||||| ||||| | |||||||||| Sbjct: 14480 gacaagctcggcgtgccgggggccatcatcgtcaagaaccaccacagcaacgagttcttc 14421 Query: 443 ctcaagaccatcaccctcgacaacgtgcccggccgcg 479 ||||||||||||||||||||| |||| |||||||||| Sbjct: 14420 ctcaagaccatcaccctcgacgacgtccccggccgcg 14384 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 381 tggacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 440 ||||||||| || ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 55101 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 55042 Query: 441 tcctcaagaccatcaccctc 460 |||||||||||||||||||| Sbjct: 55041 tcctcaagaccatcaccctc 55022 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 275 gggaaggtgggcgcggaggcgaacctggagcagtggct 312 ||||||||||| |||||||||| ||||||||||||||| Sbjct: 14585 gggaaggtgggggcggaggcgagcctggagcagtggct 14548
>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds Length = 1160 Score = 117 bits (59), Expect = 3e-23 Identities = 89/99 (89%) Strand = Plus / Plus Query: 146 cgcaagaacgcgctcgacttcaacgacctcggcgccaccgtcatggacggcgtcaccgag 205 ||||||||||| |||||| |||||||| |||||||||||||| | | ||||| ||||| Sbjct: 1 cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60 Query: 206 ctcctcggccgcggcgtcacctgccagctcgtcagctcc 244 |||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 401 ggcgccatcatcgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctc 460 ||||||| || || ||||||| |||||||| ||| | || |||||||||||||||||||| Sbjct: 250 ggcgccagcaccggcaagaaccaccacgccgccggggtcgtcctcaagaccatcaccctc 309 Query: 461 gacaacgtgcccggcc 476 | |||||| ||||||| Sbjct: 310 gccaacgtccccggcc 325
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter region and partial cds Length = 5236 Score = 109 bits (55), Expect = 8e-21 Identities = 109/127 (85%) Strand = Plus / Plus Query: 352 caagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccgggcgccatcat 411 |||||||| | |||||||||||||| |||||| ||||| |||||||||||||||||| | Sbjct: 4340 caagttcggcctcaccttcgactgggaggtggagaagctcggggtgccgggcgccatcgt 4399 Query: 412 cgtcaagaacaaccacgcctccgagttcttcctcaagaccatcaccctcgacaacgtgcc 471 |||||| ||| ||||| |||||||||| | || || |||||||||||| || |||| || Sbjct: 4400 cgtcaacaactaccacagctccgagttcctgcttaaaaccatcaccctccacgacgtccc 4459 Query: 472 cggccgc 478 ||||||| Sbjct: 4460 cggccgc 4466 Score = 99.6 bits (50), Expect = 8e-18 Identities = 107/126 (84%) Strand = Plus / Plus Query: 122 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacctcggcgcc 181 ||||||||| | || || |||||||||||||||| ||| ||| |||||||| |||||||| Sbjct: 3566 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 3625 Query: 182 accgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcgtcagc 241 ||| |||| |||||| || |||| |||||||| ||||||||||||||||| ||||| Sbjct: 3626 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 3685 Query: 242 tccacc 247 |||||| Sbjct: 3686 tccacc 3691 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 261 acaacggagggcgcgggaaggtgggcgcggaggcgaacctggagcagtgg 310 ||||||| || |||||||||||||||||||||||| | |||||||||||| Sbjct: 4255 acaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgg 4304
>ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 381 tggacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 440 ||||||||| || ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 302 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 361 Query: 441 tcctcaagaccatcaccctc 460 |||||||||||||||||||| Sbjct: 362 tcctcaagaccatcaccctc 381
>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for 9-lipoxigenase, complete cds Length = 2988 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 381 tggacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 440 ||||||||| || ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 368 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 427 Query: 441 tcctcaagaccatcaccctc 460 |||||||||||||||||||| Sbjct: 428 tcctcaagaccatcaccctc 447
>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full insert sequence Length = 2830 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 381 tggacaagctgggggtgccgggcgccatcatcgtcaagaacaaccacgcctccgagttct 440 ||||||||| || ||||| || ||||||||| |||||||| ||||| || |||||| Sbjct: 376 tggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttct 435 Query: 441 tcctcaagaccatcaccctc 460 |||||||||||||||||||| Sbjct: 436 tcctcaagaccatcaccctc 455
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 431 tccgagttcttcctcaagaccatcaccctcgac 463 |||||||||||||||||||| ||||||||||| Sbjct: 185 tccgagttcttcctcaagacgctcaccctcgac 217
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 431 tccgagttcttcctcaagaccatcaccctcgac 463 |||||||||||||||||||| ||||||||||| Sbjct: 664 tccgagttcttcctcaagacgctcaccctcgac 696
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 431 tccgagttcttcctcaagaccatcaccctcgac 463 |||||||||||||||||||| ||||||||||| Sbjct: 658 tccgagttcttcctcaagacgctcaccctcgac 690
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 431 tccgagttcttcctcaagaccatcaccctcgac 463 |||||||||||||||||||| ||||||||||| Sbjct: 336 tccgagttcttcctcaagacgctcaccctcgac 368
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 431 tccgagttcttcctcaagaccatcaccctcgac 463 |||||||||||||||||||| ||||||||||| Sbjct: 665 tccgagttcttcctcaagacgctcaccctcgac 697
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 434 gagttcttcctcaagaccatcaccctcgaca 464 ||||||||| |||| |||||||||||||||| Sbjct: 134348 gagttcttcgtcaacaccatcaccctcgaca 134378 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tgccagctcgtcagctccac 246 |||||||||||||||||||| Sbjct: 128278 tgccagctcgtcagctccac 128297
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 434 gagttcttcctcaagaccatcaccctcgaca 464 ||||||||| |||| |||||||||||||||| Sbjct: 20827287 gagttcttcgtcaacaccatcaccctcgaca 20827317 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tgccagctcgtcagctccac 246 |||||||||||||||||||| Sbjct: 20821217 tgccagctcgtcagctccac 20821236
>dbj|AK102084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M03, full insert sequence Length = 2930 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 434 gagttcttcctcaagaccatcaccctcgaca 464 ||||||||| |||| |||||||||||||||| Sbjct: 417 gagttcttcgtcaacaccatcaccctcgaca 447 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tgccagctcgtcagctccac 246 |||||||||||||||||||| Sbjct: 219 tgccagctcgtcagctccac 238
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full insert sequence Length = 3010 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 434 gagttcttcctcaagaccatcaccctcgaca 464 ||||||||| |||| |||||||||||||||| Sbjct: 417 gagttcttcgtcaacaccatcaccctcgaca 447 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tgccagctcgtcagctccac 246 |||||||||||||||||||| Sbjct: 219 tgccagctcgtcagctccac 238
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 432 ccgagttcttcctcaagaccatcaccctcga 462 ||||||||||||||||||| |||||||||| Sbjct: 608 ccgagttcttcctcaagacgctcaccctcga 638
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 434 gagttcttcctcaagaccatcaccctcgaca 464 ||||||||| |||| |||||||||||||||| Sbjct: 21137522 gagttcttcgtcaacaccatcaccctcgaca 21137552 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tgccagctcgtcagctccac 246 |||||||||||||||||||| Sbjct: 21131452 tgccagctcgtcagctccac 21131471
>ref|NM_003028.1| Homo sapiens Src homology 2 domain containing adaptor protein B (SHB), mRNA Length = 2306 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cggggggcctccggggcgccc 119 ||||||||||||||||||||| Sbjct: 469 cggggggcctccggggcgccc 449
>gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-carbonic anhydrase mRNA, partial cds Length = 775 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 cggcgccaccgtcatggacggcgtcaccg 203 ||||||||| ||||||||||||| ||||| Sbjct: 400 cggcgccacggtcatggacggcgccaccg 428
>emb|X75342.1|HSSHB H.sapiens SHB mRNA Length = 2306 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cggggggcctccggggcgccc 119 ||||||||||||||||||||| Sbjct: 469 cggggggcctccggggcgccc 449
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 atcaccctcgacaacgtgcc 471 |||||||||||||||||||| Sbjct: 301337 atcaccctcgacaacgtgcc 301318
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 52268 ggcgtcggcggcatcgtgag 52287
>ref|XM_359429.1| Magnaporthe grisea 70-15 hypothetical protein (MG10993.4) partial mRNA Length = 1698 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 tcgacttcaacgacctcggc 178 |||||||||||||||||||| Sbjct: 668 tcgacttcaacgacctcggc 687
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 cgccgtcaccttcgactggtcggtggac 385 ||||| ||||||||| |||||||||||| Sbjct: 3465594 cgccggcaccttcgaatggtcggtggac 3465621
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gctcctgccgacgaacctgc 329 |||||||||||||||||||| Sbjct: 137505 gctcctgccgacgaacctgc 137486
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 acctgccgttcatcaccaccggcg 347 ||||||||||||||| |||||||| Sbjct: 288875 acctgccgttcatcatcaccggcg 288852
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 acctgccgttcatcaccaccggcg 347 ||||||||||||||| |||||||| Sbjct: 153202 acctgccgttcatcatcaccggcg 153225
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cggcggcatcgtgagcgacctgac 99 ||||||||||| |||||||||||| Sbjct: 205636 cggcggcatcgagagcgacctgac 205659
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cggcggcatcgtgagcgacctgac 99 ||||||||||| |||||||||||| Sbjct: 80122 cggcggcatcgagagcgacctgac 80099
>emb|BX248093.4| Human DNA sequence from clone DASS-357K17 on chromosome 6, complete sequence Length = 111633 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 80607 ggagggcgcgggaaggtggg 80588 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 74822 ggagggcgcgggaaggtggg 74841
>emb|AL935156.4| Human DNA sequence from clone DAQB-153A4 on chromosome 6 Contains the OR2G1P pseudogene for olfactory receptor, family 2, subfamily G, member 1, the OR2H4P pseudogene for olfactory receptor, family 2, subfamily H, member 4, the OR2J4P pseudogene for olfactory receptor, family 2, subfamily J, member 4, the OR2J2 gene for olfactory receptor, family 2, subfamily J, member 2 and 2 CpG islands, complete sequence Length = 95360 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 23660 ggagggcgcgggaaggtggg 23641 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 17875 ggagggcgcgggaaggtggg 17894
>emb|AL662852.9| Human DNA sequence from clone XXbac-228J24 on chromosome 6 contains the OR2P1P, OR2J1P, OR2N1P, OR2J4P pseudogenes for olfactory receptor, family 2, subfamily P, member 1, subfamily J, member 1, subfamily N, member 1, subfamily J, member 4, the OR2B3, OR2J3, OR2J2 gene for olfactory receptor, family 2, subfamily B, member 3, subfamily J, member 3, subfamily J member 2, a GTp-binding protein pseudogene and two CpG islands, complete sequence Length = 142562 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 104762 ggagggcgcgggaaggtggg 104743 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 98977 ggagggcgcgggaaggtggg 98996
>emb|AL645937.6| Human DNA sequence from clone XXbac-171B11 on chromosome 6 contains the OR2J3 and OR2J2 genes for olfactory receptor, family 2, subfamily J, members 2 and 3, the OR2J1P, OR2N1P, OR2J4P, OR2H4P and OR2G1P pseudogenes for olfactory receptor, family 2, subfamily J, members 1 and 4, subfamily G, member 1, subfamily H, member 4 and subfamily N, member 1 and two CpG islands, complete sequence Length = 147667 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 68111 ggagggcgcgggaaggtggg 68092 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 62326 ggagggcgcgggaaggtggg 62345
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ggtgccgggcgccatcatcg 413 |||||||||||||||||||| Sbjct: 608859 ggtgccgggcgccatcatcg 608840
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 agctcctcggccgcggcgtc 223 |||||||||||||||||||| Sbjct: 1962239 agctcctcggccgcggcgtc 1962220
>ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG11980-PC, isoform C (LOC661050), mRNA Length = 1156 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 caccaacgtcgaccacaaca 263 |||||||||||||||||||| Sbjct: 239 caccaacgtcgaccacaaca 220
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gccgttcatcaccaccggcg 347 |||||||||||||||||||| Sbjct: 1867059 gccgttcatcaccaccggcg 1867040
>emb|CR759834.8| Human DNA sequence from clone DAMC-220I8 on chromosome 6, complete sequence Length = 87175 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 32750 ggagggcgcgggaaggtggg 32731
>emb|CR774181.3| Human DNA sequence from clone DAAP-270H14 on chromosome 6, complete sequence Length = 52780 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 41269 ggagggcgcgggaaggtggg 41250 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 35484 ggagggcgcgggaaggtggg 35503
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 103984 ggcgtcggcggcatcgtgag 104003
>gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, complete sequence Length = 147727 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 acctggagcagtggctcctg 316 |||||||||||||||||||| Sbjct: 78731 acctggagcagtggctcctg 78750
>emb|BX927132.7| Human DNA sequence from clone DAMA-405I21 on chromosome 6, complete sequence Length = 93511 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 47805 ggagggcgcgggaaggtggg 47786 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 42020 ggagggcgcgggaaggtggg 42039
>emb|CR388415.2| Human DNA sequence from clone DADB-150K7 on chromosome 6, complete sequence Length = 102196 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 74745 ggagggcgcgggaaggtggg 74726 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 68960 ggagggcgcgggaaggtggg 68979
>gb|AC074109.3|AC074109 Arabidopsis thaliana chromosome 1 BAC F2C1 genomic sequence, complete sequence Length = 123547 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cgacctcggcgccaccgtca 188 |||||||||||||||||||| Sbjct: 13990 cgacctcggcgccaccgtca 13971
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 tcggcgccaccgtcatggacggcg 197 ||||||||| |||||||||||||| Sbjct: 2990742 tcggcgccatcgtcatggacggcg 2990719
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 ggcgtcggcggcatcgtgagcgac 94 |||||||||||||||||| ||||| Sbjct: 5079435 ggcgtcggcggcatcgtgcgcgac 5079412
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgagcgac 94 |||||||||||||||||| ||||| Sbjct: 590306 ggcgtcggcggcatcgtgcgcgac 590329 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 tgcgcaagaacgcgctcgacttca 167 ||||||||||| |||||||||||| Sbjct: 206796 tgcgcaagaacccgctcgacttca 206773
>dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B01, full insert sequence Length = 1556 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ggcgtcggcggcatcgtgag 90 |||||||||||||||||||| Sbjct: 613 ggcgtcggcggcatcgtgag 594
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 190 ggacggcgtcaccgagctcctcggccgcggcg 221 ||||||||| | |||| ||||||||||||||| Sbjct: 1448865 ggacggcgtgatcgagttcctcggccgcggcg 1448834
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ggcgtcggcggcatcgtgagcgac 94 |||||||||||||||||| ||||| Sbjct: 657733 ggcgtcggcggcatcgtgcgcgac 657756
>emb|AL022727.1|HS80I19 Human DNA sequence from clone RP1-80I19 on chromosome 6p21.31-22.2 Contains OR2B3, OR2J3 and OR2J2 genes for olfactory receptors 2B3, 2J3 and 2J2 and olfactory receptor 2J1, 2N1, 2J4, and 2H4 pseudogenes OR2J1P, OR2N1P, OR2J4P and OR2H4P. Contains STSs, GSSs and two CpG islands, complete sequence Length = 144868 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 87170 ggagggcgcgggaaggtggg 87151 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ggagggcgcgggaaggtggg 285 |||||||||||||||||||| Sbjct: 81385 ggagggcgcgggaaggtggg 81404 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,810,658 Number of Sequences: 3902068 Number of extensions: 2810658 Number of successful extensions: 62501 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60826 Number of HSP's gapped (non-prelim): 1667 length of query: 480 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 458 effective length of database: 17,147,199,772 effective search space: 7853417495576 effective search space used: 7853417495576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
