ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl05g03 |
|---|---|
| Clone Library Name | barley_pub |
>Y8I5_ENCCU (Q8SU92) Hypothetical protein ECU10_1850| Length = 268 Score = 33.1 bits (74), Expect = 0.37 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%) Frame = +1 Query: 115 RFLRLLQPIRMD----------QWSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSV 261 RF+ LL P W SHN P+G +++T+ TL + L L F I++ + ++ Sbjct: 56 RFITLLLPFSYSAVQYAVLLHTNWKSHNKPEGILHTTLYYTL-NLLFLAFSIISILSITT 114 Query: 262 DPIQRWR 282 PI +W+ Sbjct: 115 LPINKWK 121
>Y304_ENCCU (Q8SW83) Hypothetical protein ECU03_0040| Length = 268 Score = 33.1 bits (74), Expect = 0.37 Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = +1 Query: 154 WSSHN-PQG*INSTVQ*TLVHFLVLGFFILAQVQLSVDPIQRWR 282 W SHN P+G +++T+ TL + L+L F I++ + ++ PI +W+ Sbjct: 79 WKSHNKPEGILHTTLYYTL-NLLLLAFSIISILSITTLPINKWK 121
>7LESS_DROVI (P20806) Protein sevenless (EC 2.7.10.1)| Length = 2594 Score = 32.0 bits (71), Expect = 0.83 Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 11/109 (10%) Frame = -1 Query: 339 CSLQCFVLSKLHPYCTPHSSPPLNWINRQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMR 160 CSLQ LS P P+ +N QL+LS + + E+ SLHS LTL + + Sbjct: 1727 CSLQLPALS-----AAPDCPLPVPGLNYQLNLSSSSRSAQLELR--SLHSAAGLTLNISQ 1779 Query: 159 TPLVHADRLEEAQES---GRIGGHKL--------PRIANPSAPDFISGR 46 A L S ++G L A PSAP SGR Sbjct: 1780 LQPYQAYELRAQVGSYYQQQLGQEPLQLPVLTLHTAAATPSAPRNFSGR 1828
>CT026_MOUSE (Q8CEL2) Protein C20orf26 homolog (Fragment)| Length = 399 Score = 30.4 bits (67), Expect = 2.4 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -1 Query: 330 QCFVLSKLHPYCTPHSSPPLNWINRQLDLSKNEEAQDQ 217 +CF L H +CTPH L +R+ L + E+A+ Q Sbjct: 255 ECFDLGPFHGFCTPHPDDILK-PSREPSLEEGEDAESQ 291
>GP53_BPSP1 (O48407) Putative gene 53 protein| Length = 221 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 255 QLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQE 118 +L + N+E Q + + SL S + TL +P AD LEE +E Sbjct: 94 RLQILVNKEVQGSQSTQQSLSSVFESTLEKYNSPDDFADYLEETEE 139
>HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex subunit 3 (EC| 3.6.1.-) (ASC-1 complex subunit p200) (Trip4 complex subunit p200) (Helicase, ATP binding 1) Length = 2202 Score = 29.6 bits (65), Expect = 4.1 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = +1 Query: 370 ASMRSRPRISAHHLRAYPRWRPLLK 444 +S+ + P I HHL + +W+P++K Sbjct: 1959 SSLLTLPNIENHHLHLFKKWKPIMK 1983
>YHK0_YEAST (P38772) Hypothetical protein YHR040w| Length = 366 Score = 29.3 bits (64), Expect = 5.4 Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 4/87 (4%) Frame = -1 Query: 345 ETCSLQCFVLSKLHPYCTPHSSPPLNWINRQLDLSKNEEAQDQEMNKSSLHSTVDLTLRV 166 +TCSL+C K C+ + P +I+ S+ + D + ++ + + D Sbjct: 23 QTCSLECSKKHKTRDNCSGQTHDPKEYIS-----SEALKQADDDKHERNAYVQRDYNYLT 77 Query: 165 MRTPLVHADRLEEAQES----GRIGGH 97 +VH +++ ++ G +GGH Sbjct: 78 QLKRMVHVQKMDARMKNKRVLGPVGGH 104
>E2AK4_HUMAN (Q9P2K8) Eukaryotic translation initiation factor 2-alpha kinase 4| (EC 2.7.11.1) (GCN2-like protein) Length = 1649 Score = 29.3 bits (64), Expect = 5.4 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 7/84 (8%) Frame = -1 Query: 258 RQLDLSKNEEAQDQEMNKSSLHSTVDLTLRVMRTPLVHADRLEEAQESGRI-------GG 100 R L+ + EE + +E+ ++ R + +RLE A S + GG Sbjct: 160 RLLEAKRKEEQEQREILHEIQRRKEEIKEEKKRKEMAKQERLEIASLSNQDHTSKKDPGG 219 Query: 99 HKLPRIANPSAPDFISGREGRRSS 28 H+ I + +PDF+ + R +S Sbjct: 220 HRTAAILHGGSPDFVGNGKHRANS 243
>PHLPP_CAEEL (Q09564) Protein phosphatase PHLPP-like protein (EC 3.1.3.16)| Length = 1036 Score = 29.3 bits (64), Expect = 5.4 Identities = 20/82 (24%), Positives = 37/82 (45%) Frame = +3 Query: 228 LLHSCSSPAVC*SNSKVEMSVEYNMDEALKARNTAESKFHARDLRGARKYAVKAQNLCPS 407 L+H+ + NS + + + N DEAL+ RN K + + R +K ++C Sbjct: 62 LIHTWQNARAVFYNSNIRLQTKNNQDEALQIRN---MKVDVHESKRGRALRLKDDDVCYL 118 Query: 408 LEGISQMASTLEVHLAAESKID 473 + I Q + LE L +++ Sbjct: 119 I--IFQRPNILEAWLTRAQQVE 138
>TRME_PORGI (Q7MVZ2) tRNA modification GTPase trmE| Length = 474 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = -1 Query: 171 RVMRTPLVHADRLEEAQESGRIGGHKL--PRIANPSAPDFISGREGR 37 R RT ++ ++ E E+ RIG + +++ P+ P FIS REGR Sbjct: 335 REERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGR 381
>SYFA_BARQU (Q6G0Y4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 361 Score = 28.9 bits (63), Expect = 7.1 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Frame = -1 Query: 279 PPLNWI-NRQLDL--SKNEEAQDQEMNKSSLHSTVDLTLRVMRTPL 151 P LN + NR L+L K + + Q MNK TVD+TL V +PL Sbjct: 58 PVLNGLKNRVLELWVQKRDLLRRQAMNKRLSRETVDVTLPVRSSPL 103
>ERBB3_RAT (Q62799) Receptor tyrosine-protein kinase erbB-3 precursor (EC| 2.7.10.1) (c-erbB3) Length = 1339 Score = 28.5 bits (62), Expect = 9.2 Identities = 23/85 (27%), Positives = 30/85 (35%), Gaps = 4/85 (4%) Frame = -1 Query: 459 PLQDELQEWTPSGICPQVMGRDSGP*PHTCVHP--*GRARETCSLQCFVLSKLHP--YCT 292 P D+ Q T + PQ GR GP P+ C H G CF + + C Sbjct: 197 PGPDDCQILTKTICAPQCNGRCFGPNPNQCCHDECAGGCSGPQDTDCFACRRFNDSGACV 256 Query: 291 PHSSPPLNWINRQLDLSKNEEAQDQ 217 P PL + L N + Q Sbjct: 257 PRCPEPLVYNKLTFQLEPNPHTKYQ 281 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,493,836 Number of Sequences: 219361 Number of extensions: 1305679 Number of successful extensions: 3897 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3808 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3897 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
