>ref|XM_415738.1| PREDICTED: Gallus gallus similar to eukaryotic translation
           initiation factor 4H isoform 1 (LOC417490), mRNA
          Length = 2853

 Score = 40.1 bits (20), Expect = 0.72
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  tcagagagccaacggaagag 69
           ||||||||||||||||||||
Sbjct: 962 tcagagagccaacggaagag 981

>emb|AL390294.19| Human DNA sequence from clone RP11-379F12 on chromosome 10 Contains the
              3' end of the TAF3 gene for TAF3 RNA polymerase II, TATA
              box binding protein (TBP)-associated factor, 140kDa
              (TAF140,TAFII140), the GATA3 gene for GATA binding protein
              3 (HDR,MGC5445), two novel genes and 3 CpG islands,
              complete sequence
          Length = 151559

 Score = 40.1 bits (20), Expect = 0.72
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      ctccttcccgcattcattcgttcc 24
              ||||||||||||||||||| ||||
Sbjct: 149821 ctccttcccgcattcattcattcc 149798

>emb|AJ719324.1| Gallus gallus mRNA for hypothetical protein, clone 1g12
          Length = 4931

 Score = 40.1 bits (20), Expect = 0.72
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   tcagagagccaacggaagag 69
            ||||||||||||||||||||
Sbjct: 3026 tcagagagccaacggaagag 3045

>emb|AL591882.12| Mouse DNA sequence from clone RP23-53L16 on chromosome 2, complete
              sequence
          Length = 251814

 Score = 40.1 bits (20), Expect = 0.72
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     acagatttccaaatcagaga 56
              ||||||||||||||||||||
Sbjct: 121479 acagatttccaaatcagaga 121460

>ref|NM_001001494.2| Mus musculus RIKEN cDNA 8030463A06 gene (8030463A06Rik), mRNA
          Length = 2619

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 45   ccaaatcagagagccaacggaag 67
            |||||||||||||||||| ||||
Sbjct: 2228 ccaaatcagagagccaactgaag 2206

>gb|AC003083.2| Homo sapiens BAC clone CTB-60N22 from 7, complete sequence
          Length = 136823

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     gagaacaacaaacagattt 44
              |||||||||||||||||||
Sbjct: 125608 gagaacaacaaacagattt 125590

>gb|AC123955.5| Mus musculus BAC clone RP23-274C16 from 1, complete sequence
          Length = 189764

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     aacaaacagatttccaaat 50
              |||||||||||||||||||
Sbjct: 147427 aacaaacagatttccaaat 147409

>gb|AC108773.9| Mus musculus chromosome 5, clone RP23-118L1, complete sequence
          Length = 222706

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 27    agaacaacaaacagatttccaaa 49
             |||||| ||||||||||||||||
Sbjct: 79844 agaacaccaaacagatttccaaa 79866

>emb|AL445307.8| Human DNA sequence from clone RP5-826L7 on chromosome 6 Contains part
             of a novel gene and a CpG island, complete sequence
          Length = 26478

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    acaacaaacagatttccaa 48
             |||||||||||||||||||
Sbjct: 20144 acaacaaacagatttccaa 20126

>emb|AL162575.15| Human DNA sequence from clone RP11-310K10 on chromosome 13 Contains the
             3' end of the PCDH20 gene for protocadherin 20 and a CpG
             island, complete sequence
          Length = 163231

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    aacaaacagatttccaaat 50
             |||||||||||||||||||
Sbjct: 61674 aacaaacagatttccaaat 61692

>emb|CR762431.9| Zebrafish DNA sequence from clone DKEY-220O10 in linkage group 13,
             complete sequence
          Length = 96564

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    aacaaacagatttccaaatcaga 54
             |||||||||||||||||| ||||
Sbjct: 27815 aacaaacagatttccaaaccaga 27793

>emb|AL714006.13| Mouse DNA sequence from clone RP23-173E15 on chromosome 4 Contains a
             novel gene and the 3' end of a novel gene, complete
             sequence
          Length = 196097

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 45    ccaaatcagagagccaacggaag 67
             |||||||||||||||||| ||||
Sbjct: 57004 ccaaatcagagagccaactgaag 56982

>emb|BX293996.16| Zebrafish DNA sequence from clone DKEY-38J20 in linkage group 1,
             complete sequence
          Length = 237723

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    aacaaacagatttccaaatcaga 54
             |||| ||||||||||||||||||
Sbjct: 66058 aacagacagatttccaaatcaga 66036

>gb|AC099509.2| Homo sapiens chromosome 5 clone RP11-254I22, complete sequence
          Length = 145514

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     gagaacaacaaacagattt 44
              |||||||||||||||||||
Sbjct: 113915 gagaacaacaaacagattt 113933

>dbj|AK144670.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
            library, clone:G730021M14 product:unclassifiable, full
            insert sequence
          Length = 2408

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 32   aacaaacagatttccaaat 50
            |||||||||||||||||||
Sbjct: 1443 aacaaacagatttccaaat 1425

>dbj|AK046039.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230337E12
            product:unclassifiable, full insert sequence
          Length = 1996

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 32   aacaaacagatttccaaat 50
            |||||||||||||||||||
Sbjct: 1033 aacaaacagatttccaaat 1015

>dbj|AK033210.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:8030463A06 product:hypothetical
            protein, full insert sequence
          Length = 2619

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 45   ccaaatcagagagccaacggaag 67
            |||||||||||||||||| ||||
Sbjct: 2228 ccaaatcagagagccaactgaag 2206

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 26       gagaacaacaaacagattt 44
                |||||||||||||||||||
Sbjct: 32528586 gagaacaacaaacagattt 32528604

>emb|BX537165.3| Zebrafish DNA sequence from clone CH211-263O4 in linkage group 1,
              complete sequence
          Length = 158346

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 32     aacaaacagatttccaaatcaga 54
              |||| ||||||||||||||||||
Sbjct: 105496 aacagacagatttccaaatcaga 105518

>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1353_F08
          Length = 101988

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    gagaacaacaaacagattt 44
             |||||||||||||||||||
Sbjct: 25559 gagaacaacaaacagattt 25577

>gb|AC132393.4| Mus musculus BAC clone RP23-386K20 from 1, complete sequence
          Length = 220050

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     aacaaacagatttccaaat 50
              |||||||||||||||||||
Sbjct: 219228 aacaaacagatttccaaat 219246


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 612,219
Number of Sequences: 3902068
Number of extensions: 612219
Number of successful extensions: 40818
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40774
Number of HSP's gapped (non-prelim): 44
length of query: 72
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 51
effective length of database: 17,151,101,840
effective search space: 874706193840
effective search space used: 874706193840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)