>ref|XM_470859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 7041

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                        
Query: 354  ggtttgttttctgggccatctttaataccaactccgattcgagccattcagattggctcc 413
            ||||| ||||||||||| ||||| |||||||||||  ||| ||||||||||||||| |||
Sbjct: 3364 ggtttattttctgggccttctttgataccaactcctgttccagccattcagattggttcc 3423

                                                                        
Query: 414  atgcagatgccgatccatctccacaatcagattaacccatccctggctcaactgctccct 473
            || || ||||| ||  |||||||||| |||||||| ||||||||  ||||| | | ||||
Sbjct: 3424 attcaaatgcctataaatctccacaaccagattaatccatccctatctcaagtacaccct 3483

                      
Query: 474  tcatcagctc 483
            ||| ||||||
Sbjct: 3484 tcaccagctc 3493



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                               
Query: 14   agaaatggaaccagttatacttggattcgatcagggtgtacaggttgaaat 64
            |||||||||||| |||||||||||||| ||| |||||||||||||||||||
Sbjct: 3009 agaaatggaaccggttatacttggatttgatgagggtgtacaggttgaaat 3059

>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0004M10, complete sequence
          Length = 152423

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                         
Query: 354   ggtttgttttctgggccatctttaataccaactccgattcgagccattcagattggctcc 413
             ||||| ||||||||||| ||||| |||||||||||  ||| ||||||||||||||| |||
Sbjct: 60264 ggtttattttctgggccttctttgataccaactcctgttccagccattcagattggttcc 60323

                                                                         
Query: 414   atgcagatgccgatccatctccacaatcagattaacccatccctggctcaactgctccct 473
             || || ||||| ||  |||||||||| |||||||| ||||||||  ||||| | | ||||
Sbjct: 60324 attcaaatgcctataaatctccacaaccagattaatccatccctatctcaagtacaccct 60383

                       
Query: 474   tcatcagctc 483
             ||| ||||||
Sbjct: 60384 tcaccagctc 60393



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                
Query: 14    agaaatggaaccagttatacttggattcgatcagggtgtacaggttgaaat 64
             |||||||||||| |||||||||||||| ||| |||||||||||||||||||
Sbjct: 59909 agaaatggaaccggttatacttggatttgatgagggtgtacaggttgaaat 59959

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                            
Query: 354      ggtttgttttctgggccatctttaataccaactccgattcgagccattcagattggctcc 413
                ||||| ||||||||||| ||||| |||||||||||  ||| ||||||||||||||| |||
Sbjct: 15798464 ggtttattttctgggccttctttgataccaactcctgttccagccattcagattggttcc 15798523

                                                                            
Query: 414      atgcagatgccgatccatctccacaatcagattaacccatccctggctcaactgctccct 473
                || || ||||| ||  |||||||||| |||||||| ||||||||  ||||| | | ||||
Sbjct: 15798524 attcaaatgcctataaatctccacaaccagattaatccatccctatctcaagtacaccct 15798583

                          
Query: 474      tcatcagctc 483
                ||| ||||||
Sbjct: 15798584 tcaccagctc 15798593



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                   
Query: 14       agaaatggaaccagttatacttggattcgatcagggtgtacaggttgaaat 64
                |||||||||||| |||||||||||||| ||| |||||||||||||||||||
Sbjct: 15798109 agaaatggaaccggttatacttggatttgatgagggtgtacaggttgaaat 15798159

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                            
Query: 354      ggtttgttttctgggccatctttaataccaactccgattcgagccattcagattggctcc 413
                ||||| ||||||||||| ||||| |||||||||||  ||| ||||||||||||||| |||
Sbjct: 15792998 ggtttattttctgggccttctttgataccaactcctgttccagccattcagattggttcc 15793057

                                                                            
Query: 414      atgcagatgccgatccatctccacaatcagattaacccatccctggctcaactgctccct 473
                || || ||||| ||  |||||||||| |||||||| ||||||||  ||||| | | ||||
Sbjct: 15793058 attcaaatgcctataaatctccacaaccagattaatccatccctatctcaagtacaccct 15793117

                          
Query: 474      tcatcagctc 483
                ||| ||||||
Sbjct: 15793118 tcaccagctc 15793127



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                   
Query: 14       agaaatggaaccagttatacttggattcgatcagggtgtacaggttgaaat 64
                |||||||||||| |||||||||||||| ||| |||||||||||||||||||
Sbjct: 15792643 agaaatggaaccggttatacttggatttgatgagggtgtacaggttgaaat 15792693

>gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome 13, complete sequence
          Length = 202905

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 151    tgagatgtggttcagttgatcctt 174
              ||||||||||||||||||||||||
Sbjct: 113110 tgagatgtggttcagttgatcctt 113087

>ref|XM_453187.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D02684g predicted mRNA
          Length = 603

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 81  cttgaattaagttctgtgaag 101
           |||||||||||||||||||||
Sbjct: 49  cttgaattaagttctgtgaag 69

>gb|AY600371.1| Homo sapiens replication factor C (activator 1) 1, 145kDa (RFC1) gene,
             complete cds
          Length = 82933

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 344   tgttagtctgggtttgttttc 364
             |||||||||||||||||||||
Sbjct: 48729 tgttagtctgggtttgttttc 48749

>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1715506

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 81     cttgaattaagttctgtgaag 101
              |||||||||||||||||||||
Sbjct: 229118 cttgaattaagttctgtgaag 229098

>gb|AC110792.3| Homo sapiens BAC clone RP11-571I18 from 4, complete sequence
          Length = 170202

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 14    agaaatggaaccagttatact 34
             |||||||||||||||||||||
Sbjct: 73514 agaaatggaaccagttatact 73534

>gb|AC093855.3| Homo sapiens BAC clone RP11-511M22 from 4, complete sequence
          Length = 188416

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 344    tgttagtctgggtttgttttc 364
              |||||||||||||||||||||
Sbjct: 178767 tgttagtctgggtttgttttc 178747

>ref|NM_179659.1| Arabidopsis thaliana ATKEA4; potassium:hydrogen antiporter
           AT2G19600 (ATKEA4) mRNA, complete cds
          Length = 2204

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 326 tgaccagaacgaagttcctg 345
           ||||||||||||||||||||
Sbjct: 332 tgaccagaacgaagttcctg 351

>gb|AC101727.8| Mus musculus chromosome 1, clone RP23-327G3, complete sequence
          Length = 196065

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 349   gtctgggtttgttttctgggccat 372
             |||||||||| |||||||||||||
Sbjct: 95600 gtctgggtttcttttctgggccat 95623

>gb|AC098294.6| Rattus norvegicus 8 BAC CH230-1L23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 150308

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   gtttgttttctgggccatct 374
             ||||||||||||||||||||
Sbjct: 12134 gtttgttttctgggccatct 12153

>gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 237199

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   gtttgttttctgggccatct 374
             ||||||||||||||||||||
Sbjct: 88029 gtttgttttctgggccatct 88010

>gb|AC161285.2| Pan troglodytes BAC clone CH251-310B11 from chromosome 7, complete
             sequence
          Length = 171038

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    tgtgaagagcactgaactgg 114
             ||||||||||||||||||||
Sbjct: 52562 tgtgaagagcactgaactgg 52543

>gb|AC161473.5| Pan troglodytes BAC clone CH251-460F23 from chromosome 7, complete
              sequence
          Length = 170605

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     tgtgaagagcactgaactgg 114
              ||||||||||||||||||||
Sbjct: 137419 tgtgaagagcactgaactgg 137400

>gb|AC000057.1| Homo sapiens BAC clone CTB-67M9 from 7, complete sequence
          Length = 78631

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 95   tgtgaagagcactgaactgg 114
            ||||||||||||||||||||
Sbjct: 6934 tgtgaagagcactgaactgg 6953

>emb|CR855325.15| Zebrafish DNA sequence from clone DKEY-48K8 in linkage group 5,
            complete sequence
          Length = 198456

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   tgaattaagttctgtgaaga 102
            ||||||||||||||||||||
Sbjct: 4225 tgaattaagttctgtgaaga 4244

>gb|AC112154.4| Mus musculus BAC clone RP24-98L2 from chromosome 1, complete sequence
          Length = 200202

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 349    gtctgggtttgttttctgggccat 372
              |||||||||| |||||||||||||
Sbjct: 137726 gtctgggtttcttttctgggccat 137749

>gb|AC142302.1| Pan troglodytes BAC clone RP43-128I16 from 7, complete sequence
          Length = 161986

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    tgtgaagagcactgaactgg 114
             ||||||||||||||||||||
Sbjct: 96023 tgtgaagagcactgaactgg 96042

>emb|AL513492.10| Human DNA sequence from clone RP11-365P20 on chromosome 6, complete
              sequence
          Length = 113677

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    agattggctccatgcagatg 422
              ||||||||||||||||||||
Sbjct: 113346 agattggctccatgcagatg 113365

>emb|AL121757.7|HSDJ828H9 Human DNA sequence from clone RP5-828H9 on chromosome 20 Contains two
             novel genes and two CpG islands, complete sequence
          Length = 167013

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    taatgagcttgaattaagttctgt 97
             |||||| |||||||||||||||||
Sbjct: 82675 taatgaccttgaattaagttctgt 82698

>emb|AL049842.5|HSDJ129L7 Human DNA sequence from clone RP1-129L7 on chromosome 6q12-13
            Contains a nuclear fragile X mental retardation protein
            interacting protein 1 (NUFIP1) pseudogene, complete
            sequence
          Length = 80837

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 403  agattggctccatgcagatg 422
            ||||||||||||||||||||
Sbjct: 1669 agattggctccatgcagatg 1688

>gb|AY091119.1| Arabidopsis thaliana At2g19600 mRNA sequence
          Length = 2235

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 326 tgaccagaacgaagttcctg 345
           ||||||||||||||||||||
Sbjct: 332 tgaccagaacgaagttcctg 351

>gb|AC109473.2| Homo sapiens chromosome 5 clone RP11-3B10, complete sequence
          Length = 170363

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   tctgggtttgttttctgggc 369
             ||||||||||||||||||||
Sbjct: 23605 tctgggtttgttttctgggc 23586

>gb|AC008575.7| Homo sapiens chromosome 5 clone CTC-554D6, complete sequence
          Length = 168285

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   tctgggtttgttttctgggc 369
             ||||||||||||||||||||
Sbjct: 64607 tctgggtttgttttctgggc 64626

>gb|AC079463.3|AC079463 Homo sapiens chromosome 5 clone CTB-123N6, complete sequence
          Length = 106514

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   tctgggtttgttttctgggc 369
             ||||||||||||||||||||
Sbjct: 39218 tctgggtttgttttctgggc 39199

>gb|AC151582.3| Pan troglodytes BAC clone RP43-3F18 from chromosome 7, complete sequence
          Length = 197992

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     tgtgaagagcactgaactgg 114
              ||||||||||||||||||||
Sbjct: 195913 tgtgaagagcactgaactgg 195894

>dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:26D12, complete sequence
          Length = 156014

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    ttgattcatcaacatcagca 320
              ||||||||||||||||||||
Sbjct: 108412 ttgattcatcaacatcagca 108431

>gb|AC103893.2| Papio anubis clone RP41-216H1, complete sequence
          Length = 155255

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    tgtgaagagcactgaactgg 114
             ||||||||||||||||||||
Sbjct: 30994 tgtgaagagcactgaactgg 31013

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 306     tcatcaacatcagcagtaat 325
               ||||||||||||||||||||
Sbjct: 1718870 tcatcaacatcagcagtaat 1718851

>emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chromosome 11, complete
              sequence
          Length = 221399

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    gttgagatgtggttcagttg 168
              ||||||||||||||||||||
Sbjct: 119975 gttgagatgtggttcagttg 119956

>emb|AL844167.7| Mouse DNA sequence from clone RP23-66F6 on chromosome 2, complete
              sequence
          Length = 232834

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    tttctgggccatctttaata 380
              ||||||||||||||||||||
Sbjct: 144912 tttctgggccatctttaata 144893

>emb|AL732419.6| Mouse DNA sequence from clone RP23-228A20 on chromosome X, complete
              sequence
          Length = 194380

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    tgtggttcagttgatcctta 175
              ||||||||||||||||||||
Sbjct: 162024 tgtggttcagttgatcctta 162043

>gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, complete sequence
          Length = 183967

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   tctgggtttgttttctgggc 369
             ||||||||||||||||||||
Sbjct: 13776 tctgggtttgttttctgggc 13757


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,951,713
Number of Sequences: 3902068
Number of extensions: 3951713
Number of successful extensions: 80345
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80213
Number of HSP's gapped (non-prelim): 132
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)