>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 757

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = +3

Query: 12  PPHLH--SNRIAPLPPISPPS 68
           PPH H  S  I+P PPI+PPS
Sbjct: 584 PPHPHHGSGGISPPPPITPPS 604

>KCNC3_RAT (Q01956) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 889

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = +3

Query: 12  PPHLH--SNRIAPLPPISPPS 68
           PPH H  S  I+P PPI+PPS
Sbjct: 585 PPHPHHGSGGISPPPPITPPS 605

>KCNC3_MOUSE (Q63959) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 769

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = +3

Query: 12  PPHLH--SNRIAPLPPISPPS 68
           PPH H  S  I+P PPI+PPS
Sbjct: 584 PPHPHHGSGGISPPPPITPPS 604

>SECY_SYNP7 (P0A4H0) Preprotein translocase secY subunit|
          Length = 439

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 258 WALLLFIPVDVWLTGFRPTESPRCLIQT 341
           WALL  I + VW+T +  T  P   IQT
Sbjct: 135 WALLQSIVIAVWVTRYAVTPGPLFTIQT 162

>SECY_SYNP6 (P0A4H1) Preprotein translocase secY subunit|
          Length = 439

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 258 WALLLFIPVDVWLTGFRPTESPRCLIQT 341
           WALL  I + VW+T +  T  P   IQT
Sbjct: 135 WALLQSIVIAVWVTRYAVTPGPLFTIQT 162

>SYTL2_HUMAN (Q9HCH5) Synaptotagmin-like protein 2 (Exophilin-4)|
          Length = 895

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 302 ASQPNVDGNEEK*SPTLPPLLRGAARDLPS 213
           +S+    G+EE+ SP L  L R AAR +PS
Sbjct: 465 SSRDRQQGSEEEPSPVLKTLERSAARKMPS 494

>DEMA_MOUSE (Q9WV69) Dematin (Erythrocyte membrane protein band 4.9)|
          Length = 405

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 380 SRSLPDTGRSILDGLYQTPRAFGGAEASQPNVDGNE 273
           S SLP  GR+ L  L  T  +  G+EA  P +   E
Sbjct: 287 SSSLPSYGRTTLSRLQSTEFSPSGSEAGSPGLQNGE 322

>ZIP8_ARATH (Q8S3W4) Probable zinc transporter 8 precursor (ZRT/IRT-like|
           protein 8)
          Length = 347

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 263 STSLHSRRRLADWLPPHRKP*VFDTDHPKLSAQYLGVTCSK 385
           +TSL++++ +AD       P +   DH  L+ +    TCSK
Sbjct: 146 ATSLYTKKAVADDSEERTTPMIIQIDHLPLTTKERSSTCSK 186

>KSR2_HUMAN (Q6VAB6) Kinase suppressor of ras-2 (hKSR2)|
          Length = 829

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/25 (60%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +2

Query: 11  SPASPLQPHRTPPSHLPSLHPA-QC 82
           SPA PL P  TPPS    LHP+ QC
Sbjct: 410 SPAPPLPPSATPPS---PLHPSPQC 431

>ZIM10_HUMAN (Q9ULJ6) Retinoic acid-induced protein 17 (PIAS-like protein Zimp10)|
          Length = 1067

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 14   PASPLQPHRTPPSHLPSLHP 73
            P  P QP R PP   PS HP
Sbjct: 983  PPPPSQPPRQPPQAAPSSHP 1002


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,132,128
Number of Sequences: 219361
Number of extensions: 558323
Number of successful extensions: 1850
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1847
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)